AlfalfaGEDB | MS.gene062962

M. sativa cultivar XinJiangDaYe / MS.gene062962

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062962.t1	AES89342.1	94.5	91	5	0	1	91	1	91	5.50E-42	179.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062962.t1	P33083	74.4	90	23	0	1	90	1	90	1.2e-32	140.2

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062962.t1	G7JM99	94.5	91	5	0	1	91	1	91	4.0e-42	179.9

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene062962	MS.gene057818	PPI
MS.gene062962	MS.gene79889	PPI
MS.gene062962	MS.gene045368	PPI
MS.gene062962	MS.gene045360	PPI
MS.gene062962	MS.gene014222	PPI
MS.gene062962	MS.gene79888	PPI
MS.gene75677	MS.gene062962	PPI
MS.gene062962	MS.gene75678	PPI
MS.gene062962	MS.gene01764	PPI
MS.gene062962	MS.gene031199	PPI
MS.gene045361	MS.gene062962	PPI
MS.gene062962	MS.gene75673	PPI
MS.gene062962	MS.gene79885	PPI
MS.gene003591	MS.gene062962	PPI
MS.gene062979	MS.gene062962	PPI
MS.gene062962	MS.gene031198	PPI
MS.gene062943	MS.gene062962	PPI
MS.gene01358	MS.gene062962	PPI
MS.gene062962	MS.gene50764	PPI
MS.gene003608	MS.gene062962	PPI
MS.gene062962	MS.gene003577	PPI
MS.gene40326	MS.gene062962	PPI
MS.gene062952	MS.gene062962	PPI
MS.gene062962	MS.gene75672	PPI
MS.gene062962	MS.gene75674	PPI
MS.gene062962	MS.gene50654	PPI
MS.gene062962	MS.gene50675	PPI
MS.gene50676	MS.gene062962	PPI
MS.gene062962	MS.gene014670	PPI
MS.gene23370	MS.gene062962	PPI
MS.gene50766	MS.gene062962	PPI
MS.gene062962	MS.gene77524	PPI
MS.gene003594	MS.gene062962	PPI
MS.gene50665	MS.gene062962	PPI
MS.gene003625	MS.gene062962	PPI
MS.gene062962	MS.gene79887	PPI
MS.gene062962	MS.gene75314	PPI
MS.gene062962	MS.gene75679	PPI
MS.gene062962	MS.gene40325	PPI
MS.gene50763	MS.gene062962	PPI
MS.gene062962	MS.gene50677	PPI
MS.gene062962	MS.gene68760	PPI
MS.gene045365	MS.gene062962	PPI
MS.gene062962	MS.gene50684	PPI
MS.gene062962	MS.gene057797	PPI
MS.gene062962	MS.gene003614	PPI
MS.gene062962	MS.gene014668	PPI
MS.gene50659	MS.gene062962	PPI
MS.gene062962	MS.gene77528	PPI
MS.gene062962	MS.gene79886	PPI
MS.gene062962	MS.gene014671	PPI
MS.gene062962	MS.gene50765	PPI
MS.gene75316	MS.gene062962	PPI
MS.gene062962	MS.gene003596	PPI
MS.gene062962	MS.gene062988	PPI
MS.gene057790	MS.gene062962	PPI
MS.gene062962	MS.gene23371	PPI
MS.gene003624	MS.gene062962	PPI
MS.gene062962	MS.gene062974	PPI
MS.gene031201	MS.gene062962	PPI
MS.gene062962	MS.gene003583	PPI
MS.gene062962	MS.gene062951	PPI
MS.gene062962	MS.gene057801	PPI
MS.gene77529	MS.gene062962	PPI
MS.gene062962	MS.gene77527	PPI
MS.gene062962	MS.gene79891	PPI
MS.gene014667	MS.gene062962	PPI
MS.gene062962	MS.gene057795	PPI
MS.gene062962	MS.gene68162	PPI
MS.gene062962	MS.gene045367	PPI
MS.gene062962	MS.gene045364	PPI
MS.gene062962	MS.gene045363	PPI
MS.gene062962	MS.gene75675	PPI
MS.gene057778	MS.gene062962	PPI
MS.gene062962	MS.gene50652	PPI
MS.gene062962	MS.gene68761	PPI
MS.gene062962	MS.gene002380	PPI
MS.gene062962	MS.gene68165	PPI
MS.gene062962	MS.gene77526	PPI
MS.gene79890	MS.gene062962	PPI
MS.gene062962	MS.gene045366	PPI
MS.gene003615	MS.gene062962	PPI
MS.gene062962	MS.gene045362	PPI
MS.gene062962	MS.gene23372	PPI
MS.gene003602	MS.gene062962	PPI
MS.gene062962	MS.gene75315	PPI
MS.gene062962	MS.gene68164	PPI
MS.gene062962	MS.gene68759	PPI
MS.gene062962	MS.gene003586	PPI
MS.gene062984	MS.gene062962	PPI
MS.gene062962	MS.gene003627	PPI
MS.gene062962	MS.gene031200	PPI
MS.gene40327	MS.gene062962	PPI
MS.gene062962	MS.gene75676	PPI
MS.gene062962	MS.gene50687	PPI
MS.gene062962	MS.gene014223	PPI
MS.gene77523	MS.gene062962	PPI
MS.gene003587	MS.gene062962	PPI
MS.gene062962	MS.gene014669	PPI
MS.gene062962	MS.gene057808	PPI
MS.gene003590	MS.gene062962	PPI
MS.gene063112	MS.gene062962	PPI
MS.gene062962	MS.gene062963	PPI
MS.gene062962	MS.gene68163	PPI
MS.gene062973	MS.gene062962	PPI
MS.gene047517	MS.gene062962	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062962.t1	MTR_4g072730	94.505	91	5	0	1	91	1	91	8.70e-62	182
MS.gene062962.t1	MTR_4g072620	88.043	92	11	0	1	92	1	92	4.27e-58	173
MS.gene062962.t1	MTR_4g072480	86.957	92	12	0	1	92	1	92	3.01e-57	171
MS.gene062962.t1	MTR_4g072660	88.043	92	6	1	1	92	1	87	3.00e-55	166
MS.gene062962.t1	MTR_4g072680	83.696	92	15	0	1	92	1	92	6.83e-55	165
MS.gene062962.t1	MTR_4g072460	81.522	92	17	0	1	92	1	92	4.48e-53	160
MS.gene062962.t1	MTR_4g072500	79.348	92	19	0	1	92	1	92	3.86e-51	155
MS.gene062962.t1	MTR_4g072640	76.667	90	21	0	1	90	1	90	1.19e-48	149
MS.gene062962.t1	MTR_4g072570	75.000	92	23	0	1	92	1	92	4.43e-48	148
MS.gene062962.t1	MTR_4g072530	75.556	90	22	0	1	90	1	90	7.46e-48	147
MS.gene062962.t1	MTR_3g084150	70.652	92	27	0	1	92	1	92	1.12e-45	142
MS.gene062962.t1	MTR_4g072270	69.892	93	27	1	1	92	1	93	4.20e-45	140
MS.gene062962.t1	MTR_4g072310	68.817	93	28	1	1	92	1	93	1.01e-44	139
MS.gene062962.t1	MTR_3g084180	69.565	92	28	0	1	92	1	92	2.14e-44	139
MS.gene062962.t1	MTR_4g072880	67.742	93	29	1	1	92	1	93	2.28e-44	139
MS.gene062962.t1	MTR_8g461410	68.478	92	29	0	1	92	1	92	2.61e-44	138
MS.gene062962.t1	MTR_4g072860	70.968	93	26	1	1	92	1	93	6.11e-44	137
MS.gene062962.t1	MTR_4g072240	69.231	91	27	1	1	90	1	91	9.54e-44	137
MS.gene062962.t1	MTR_4g072230	68.817	93	26	2	1	92	1	91	6.30e-43	135
MS.gene062962.t1	MTR_4g072250	69.892	93	26	2	1	92	1	92	3.40e-42	133
MS.gene062962.t1	MTR_4g072870	67.033	91	29	1	1	90	1	91	4.20e-42	132
MS.gene062962.t1	MTR_3g084240	66.304	92	31	0	1	92	1	92	7.41e-42	132
MS.gene062962.t1	MTR_4g072220	64.516	93	32	1	1	92	1	93	8.80e-42	132
MS.gene062962.t1	MTR_4g072300	64.835	91	31	1	1	90	1	91	9.89e-42	132
MS.gene062962.t1	MTR_3g117630	72.093	86	24	0	7	92	7	92	1.58e-41	131
MS.gene062962.t1	MTR_3g084170	66.304	92	31	0	1	92	1	92	1.67e-41	131
MS.gene062962.t1	MTR_3g110042	70.115	87	26	0	1	87	1	87	1.23e-40	129
MS.gene062962.t1	MTR_4g072330	66.667	90	28	1	1	90	1	88	3.51e-40	128
MS.gene062962.t1	MTR_3g110038	64.130	92	33	0	1	92	1	92	1.08e-39	127
MS.gene062962.t1	MTR_3g084220	65.217	92	32	0	1	92	1	92	1.18e-39	127
MS.gene062962.t1	MTR_4g050700	64.516	93	32	1	1	92	1	93	2.34e-39	126
MS.gene062962.t1	MTR_2g012410	64.516	93	32	1	1	92	1	93	2.34e-39	126
MS.gene062962.t1	MTR_4g072370	65.556	90	29	1	1	90	1	88	2.44e-39	125
MS.gene062962.t1	MTR_3g084250	63.043	92	34	0	1	92	1	92	4.34e-39	125
MS.gene062962.t1	MTR_3g110032	64.516	93	32	1	1	92	1	93	4.99e-39	125
MS.gene062962.t1	MTR_4g072890	61.538	91	34	1	1	90	1	91	5.66e-39	125
MS.gene062962.t1	MTR_4g072260	60.215	93	36	1	1	92	1	93	6.07e-39	125
MS.gene062962.t1	MTR_5g008360	73.750	80	21	0	13	92	4	83	6.17e-39	124
MS.gene062962.t1	MTR_4g072830	66.292	89	28	1	1	89	1	87	1.34e-38	124
MS.gene062962.t1	MTR_5g008370	77.027	74	17	0	18	91	18	91	2.74e-38	125
MS.gene062962.t1	MTR_3g084210	64.130	92	33	0	1	92	1	92	3.93e-38	123
MS.gene062962.t1	MTR_4g072490	64.444	90	27	1	1	90	1	85	5.08e-38	122
MS.gene062962.t1	MTR_4g072550	78.082	73	16	0	20	92	31	103	5.44e-38	123
MS.gene062962.t1	MTR_4g072630	64.444	90	28	1	1	90	1	86	6.30e-38	122
MS.gene062962.t1	MTR_4g072580	63.333	90	28	1	1	90	1	85	1.14e-37	121
MS.gene062962.t1	MTR_4g072740	65.556	90	26	1	1	90	1	85	1.32e-37	121
MS.gene062962.t1	MTR_4g072600	64.444	90	27	1	1	90	1	85	1.72e-37	121
MS.gene062962.t1	MTR_4g072850	64.894	94	31	1	1	92	1	94	4.22e-37	120
MS.gene062962.t1	MTR_3g084190	64.130	92	33	0	1	92	1	92	5.40e-37	120
MS.gene062962.t1	MTR_3g084260	61.290	93	35	1	1	92	1	93	8.82e-37	119
MS.gene062962.t1	MTR_4g072540	65.556	90	27	1	1	90	1	86	1.40e-36	119
MS.gene062962.t1	MTR_8g461420	63.333	90	33	0	1	90	1	90	2.20e-36	118
MS.gene062962.t1	MTR_4g072470	63.333	90	28	1	1	90	1	85	3.78e-36	117
MS.gene062962.t1	MTR_3g084160	63.043	92	34	0	1	92	1	92	6.44e-36	117
MS.gene062962.t1	MTR_3g084230	63.333	90	33	0	1	90	1	90	8.75e-36	117
MS.gene062962.t1	MTR_4g072465	58.889	90	33	1	1	90	1	86	3.09e-35	115
MS.gene062962.t1	MTR_4g072670	63.333	90	29	1	1	90	1	86	1.14e-34	114
MS.gene062962.t1	MTR_4g072590	62.222	90	29	1	1	90	1	85	1.70e-34	113
MS.gene062962.t1	MTR_4g072610	63.333	90	27	1	1	90	1	84	1.91e-34	113
MS.gene062962.t1	MTR_4g072720	63.333	90	29	1	1	90	1	86	1.97e-34	113
MS.gene062962.t1	MTR_4g072510	63.333	90	29	1	1	90	1	86	8.30e-34	112
MS.gene062962.t1	MTR_3g110045	62.366	93	33	1	2	92	59	151	9.84e-34	114
MS.gene062962.t1	MTR_4g072820	62.637	91	27	2	1	90	1	85	1.40e-33	111
MS.gene062962.t1	MTR_4g072940	70.833	72	21	0	21	92	53	124	1.72e-33	112
MS.gene062962.t1	MTR_4g072380	60.000	90	32	1	1	90	1	86	3.14e-33	110
MS.gene062962.t1	MTR_4g072650	58.889	90	31	1	1	90	1	84	5.97e-32	107
MS.gene062962.t1	MTR_4g072690	61.111	90	30	1	1	90	1	85	8.78e-31	104
MS.gene062962.t1	MTR_4g072290	55.914	93	26	2	1	92	1	79	9.66e-31	103
MS.gene062962.t1	MTR_5g008350	60.759	79	26	1	1	79	1	74	4.06e-30	102
MS.gene062962.t1	MTR_4g072770	55.556	90	30	1	1	90	1	80	6.22e-29	99.4
MS.gene062962.t1	MTR_4g072450	57.778	90	33	1	1	90	1	85	6.24e-29	99.8
MS.gene062962.t1	MTR_4g072980	51.613	93	39	2	1	92	8	95	1.09e-27	96.7
MS.gene062962.t1	MTR_4g072560	52.577	97	38	3	1	89	1	97	1.35e-27	96.7
MS.gene062962.t1	MTR_4g072910	61.194	67	26	0	24	90	34	100	2.34e-27	95.9
MS.gene062962.t1	MTR_3g117640	66.176	68	22	1	25	91	34	101	2.41e-27	96.3
MS.gene062962.t1	MTR_4g072750	55.294	85	34	2	1	81	1	85	2.98e-27	95.5
MS.gene062962.t1	MTR_3g084200	58.333	72	30	0	1	72	1	72	3.49e-27	95.9
MS.gene062962.t1	MTR_3g110035	65.152	66	23	0	27	92	73	138	4.44e-27	96.7
MS.gene062962.t1	MTR_4g072280	54.667	75	33	1	1	74	1	75	4.77e-25	89.7
MS.gene062962.t1	MTR_6g077850	53.731	67	31	0	24	90	33	99	9.52e-25	89.4
MS.gene062962.t1	MTR_3g113310	53.623	69	31	1	22	90	39	106	6.89e-24	87.4
MS.gene062962.t1	MTR_3g117610	56.716	67	28	1	23	89	43	108	7.72e-23	85.1
MS.gene062962.t1	MTR_4g072190	50.000	86	41	2	5	90	17	100	7.79e-23	84.7
MS.gene062962.t1	MTR_8g076040	46.250	80	42	1	11	90	27	105	4.84e-20	77.8
MS.gene062962.t1	MTR_4g072930	49.383	81	35	2	16	90	30	110	7.46e-20	77.4
MS.gene062962.t1	MTR_5g021820	49.254	67	33	1	24	90	39	104	1.45e-19	76.3
MS.gene062962.t1	MTR_8g461400	45.652	92	24	1	1	92	1	66	3.01e-19	74.3
MS.gene062962.t1	MTR_2g043960	44.000	75	41	1	15	89	66	139	4.65e-17	71.6
MS.gene062962.t1	MTR_4g124750	46.970	66	34	1	24	89	68	132	1.70e-16	70.1
MS.gene062962.t1	MTR_8g461210	40.698	86	50	1	4	89	14	98	3.07e-16	68.2
MS.gene062962.t1	MTR_4g072840	46.154	91	17	3	1	90	1	60	3.96e-16	66.6
MS.gene062962.t1	MTR_1g024085	44.578	83	42	2	4	83	13	94	2.73e-15	66.6
MS.gene062962.t1	MTR_4g005310	43.939	66	36	1	21	85	58	123	1.61e-14	64.7
MS.gene062962.t1	MTR_1g009150	49.180	61	30	1	25	85	71	130	1.11e-13	63.2
MS.gene062962.t1	MTR_4g072160	47.143	70	34	2	17	85	29	96	2.73e-13	61.2
MS.gene062962.t1	MTR_7g118010	47.059	68	33	2	25	90	23	89	3.13e-13	60.5
MS.gene062962.t1	MTR_1g094750	44.000	75	38	2	14	85	36	109	3.53e-13	60.5
MS.gene062962.t1	MTR_4g025830	45.455	66	32	2	25	87	79	143	4.48e-13	61.2
MS.gene062962.t1	MTR_0388s0020	41.096	73	39	2	20	89	70	141	7.82e-13	60.5
MS.gene062962.t1	MTR_3g109160	46.269	67	35	1	25	91	69	134	8.64e-13	60.5
MS.gene062962.t1	MTR_3g092220	37.647	85	47	3	1	83	12	92	1.44e-12	58.9
MS.gene062962.t1	MTR_1g061570	42.647	68	38	1	24	91	18	84	2.63e-12	58.5
MS.gene062962.t1	MTR_8g026730	44.118	68	35	2	25	90	27	93	3.62e-12	57.8
MS.gene062962.t1	MTR_4g005320	44.262	61	33	1	25	85	70	129	4.76e-12	58.5
MS.gene062962.t1	MTR_4g021810	41.558	77	40	3	10	85	14	86	1.34e-11	56.2
MS.gene062962.t1	MTR_2g066830	35.955	89	50	2	2	90	41	122	2.17e-11	56.6
MS.gene062962.t1	MTR_1g059770	43.284	67	34	2	28	91	52	117	2.45e-11	55.8
MS.gene062962.t1	MTR_7g104940	41.935	62	35	1	28	89	53	113	3.49e-11	55.5
MS.gene062962.t1	MTR_3g097120	40.000	75	36	2	19	85	3	76	4.49e-11	54.7
MS.gene062962.t1	MTR_3g098970	33.333	78	51	1	15	92	43	119	6.35e-11	55.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062962.t1	AT4G38840	55.556	99	35	3	1	90	1	99	1.05e-30	104
MS.gene062962.t1	AT4G34770	55.556	90	38	1	4	91	14	103	1.80e-29	101
MS.gene062962.t1	AT4G38825	54.217	83	37	1	9	90	7	89	7.70e-28	97.1
MS.gene062962.t1	AT5G18020	51.136	88	41	2	1	87	1	87	1.25e-27	96.7
MS.gene062962.t1	AT5G18080	66.154	65	21	1	27	90	26	90	1.70e-27	96.3
MS.gene062962.t1	AT2G21210	49.474	95	43	2	1	90	1	95	2.13e-27	96.3
MS.gene062962.t1	AT5G18060	64.615	65	22	1	27	90	26	90	2.98e-27	95.5
MS.gene062962.t1	AT4G34800	52.941	85	33	2	1	82	1	81	3.37e-27	95.5
MS.gene062962.t1	AT3G03840	53.846	91	37	2	3	91	8	95	4.17e-27	95.1
MS.gene062962.t1	AT3G03820	56.322	87	32	2	8	91	13	96	6.94e-27	94.7
MS.gene062962.t1	AT2G21200	61.972	71	26	1	20	89	16	86	7.54e-27	94.4
MS.gene062962.t1	AT5G18030	56.757	74	31	1	18	90	15	88	8.70e-27	94.4
MS.gene062962.t1	AT2G21210	49.474	95	43	2	1	90	68	162	1.19e-26	96.3
MS.gene062962.t1	AT5G18050	63.077	65	23	1	27	90	26	90	1.51e-26	93.6
MS.gene062962.t1	AT3G03850	57.609	92	30	3	3	91	8	93	1.73e-26	93.6
MS.gene062962.t1	AT4G38850	59.722	72	26	1	19	87	15	86	6.78e-26	92.0
MS.gene062962.t1	AT5G18010	48.352	91	45	2	1	90	1	90	2.32e-25	90.9
MS.gene062962.t1	AT4G34810	62.903	62	19	1	25	82	48	109	6.32e-25	90.5
MS.gene062962.t1	AT3G03830	52.273	88	33	2	3	87	8	89	1.81e-23	85.9
MS.gene062962.t1	AT4G13790	54.286	70	30	1	20	87	20	89	5.57e-23	84.7
MS.gene062962.t1	AT4G38860	55.882	68	30	0	23	90	38	105	9.34e-23	84.7
MS.gene062962.t1	AT1G75580	57.353	68	28	1	23	90	42	108	7.14e-22	82.4
MS.gene062962.t1	AT4G34790	56.923	65	26	1	25	87	39	103	1.00e-21	82.0
MS.gene062962.t1	AT2G21220	55.224	67	29	1	23	89	38	103	1.01e-21	82.0
MS.gene062962.t1	AT4G34760	54.412	68	30	1	23	90	41	107	1.14e-21	82.0
MS.gene062962.t1	AT4G34780	56.338	71	28	1	23	90	26	96	1.45e-21	81.6
MS.gene062962.t1	AT2G16580	50.000	68	33	1	23	90	42	108	2.04e-18	73.6
MS.gene062962.t1	AT1G19830	53.521	71	31	2	20	89	43	112	4.76e-18	72.8
MS.gene062962.t1	AT3G43120	39.080	87	52	1	5	91	59	144	6.45e-18	73.6
MS.gene062962.t1	AT4G36110	51.562	64	30	1	24	87	39	101	1.89e-17	71.2
MS.gene062962.t1	AT2G18010	50.000	64	31	1	24	87	47	109	9.10e-17	69.7
MS.gene062962.t1	AT5G20810	46.970	66	34	1	24	89	78	142	4.39e-16	69.3
MS.gene062962.t1	AT5G20810	43.836	73	40	1	17	89	71	142	5.22e-16	69.3
MS.gene062962.t1	AT3G20220	48.387	62	30	2	25	85	47	107	1.33e-15	66.6
MS.gene062962.t1	AT5G66260	44.444	81	39	2	15	90	19	98	1.82e-15	65.9
MS.gene062962.t1	AT1G75590	42.353	85	43	2	4	83	16	99	5.84e-15	65.9
MS.gene062962.t1	AT5G10990	47.826	69	35	1	15	83	31	98	2.84e-14	63.9
MS.gene062962.t1	AT3G12830	39.080	87	51	2	4	90	30	114	6.71e-14	62.8
MS.gene062962.t1	AT3G51200	46.429	56	29	1	27	82	42	96	2.27e-13	60.8
MS.gene062962.t1	AT1G19840	47.826	69	35	1	15	83	31	98	2.59e-13	61.6
MS.gene062962.t1	AT3G61900	42.308	78	41	2	16	90	21	97	9.86e-13	59.7
MS.gene062962.t1	AT5G53590	44.444	72	34	2	24	90	45	115	1.25e-12	59.7
MS.gene062962.t1	AT4G34750	43.750	64	35	1	24	87	36	98	1.54e-12	59.7
MS.gene062962.t1	AT4G34750	43.750	64	35	1	24	87	36	98	1.54e-12	59.7
MS.gene062962.t1	AT3G60690	41.667	72	38	2	19	87	82	152	2.26e-12	59.7
MS.gene062962.t1	AT2G46690	40.541	74	40	2	21	91	20	92	5.10e-12	57.8
MS.gene062962.t1	AT3G03847	42.105	76	41	3	8	82	54	127	5.12e-12	57.8
MS.gene062962.t1	AT3G09870	46.875	64	31	2	24	85	44	106	9.74e-12	56.6
MS.gene062962.t1	AT2G45210	39.437	71	39	2	20	87	74	143	1.71e-11	57.0
MS.gene062962.t1	AT1G56150	40.789	76	43	2	15	90	29	102	5.35e-11	54.7
MS.gene062962.t1	AT2G37030	38.462	65	39	1	24	88	48	111	5.37e-11	55.1

Find 22 sgRNAs with CRISPR-Local

Find 22 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CATATAACTTCTTGCTTGAA+TGG	0.302470	4.2:+35492747	MS.gene062962:CDS
ATTTCAAGACTTGTTGAATC+AGG	0.319811	4.2:+35492653	MS.gene062962:CDS
AATCAGGCTGAAGAAGAGTT+TGG	0.367604	4.2:+35492669	MS.gene062962:CDS
AAATCTGTAGAAGTGATAAA+AGG	0.369929	4.2:+35492558	MS.gene062962:CDS
CGTTTACACACCATTCTAAA+GGG	0.378340	4.2:+35492507	MS.gene062962:CDS
GGTTGGTTTAAGTATGAAAC+AGG	0.401861	4.2:-35492627	None:intergenic
TTCAACAAGTCTTGAAATGA+AGG	0.413456	4.2:-35492648	None:intergenic
CCGTTTACACACCATTCTAA+AGG	0.434265	4.2:+35492506	MS.gene062962:CDS
CCTTTAGAATGGTGTGTAAA+CGG	0.439798	4.2:-35492506	None:intergenic
ATATAACTTCTTGCTTGAAT+GGG	0.446395	4.2:+35492748	MS.gene062962:CDS
GGCTATGTTGCAGCGTATGT+TGG	0.486291	4.2:+35492579	MS.gene062962:CDS
ACAAGTCTTGAAATGAAGGT+TGG	0.490149	4.2:-35492644	None:intergenic
AGTTACTGAACCCTTTAGAA+TGG	0.497166	4.2:-35492517	None:intergenic
TCAAGCAAGAAGTTATATGT+TGG	0.522465	4.2:-35492743	None:intergenic
TTTGGATATGATCATCCAAT+GGG	0.545525	4.2:+35492687	MS.gene062962:CDS
GACATCTTCGGAGCAAGGAA+TGG	0.562238	4.2:-35492718	None:intergenic
GGAATGGTGAGGCCACCCAT+TGG	0.562484	4.2:-35492702	None:intergenic
TATATGTTGGAAGACATCTT+CGG	0.572640	4.2:-35492730	None:intergenic
GTTTGGATATGATCATCCAA+TGG	0.573812	4.2:+35492686	MS.gene062962:CDS
TGGAAGACATCTTCGGAGCA+AGG	0.586129	4.2:-35492723	None:intergenic
GGATATGATCATCCAATGGG+TGG	0.648071	4.2:+35492690	MS.gene062962:CDS
CTTCGGAGCAAGGAATGGTG+AGG	0.674250	4.2:-35492713	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	AAATCTGTAGAAGTGATAAA+AGG	+	chr4.2:35492558-35492577	MS.gene062962:CDS	25.0%
!	ATATAACTTCTTGCTTGAAT+GGG	+	chr4.2:35492748-35492767	MS.gene062962:CDS	25.0%
	CATATAACTTCTTGCTTGAA+TGG	+	chr4.2:35492747-35492766	MS.gene062962:CDS	30.0%
	TATATGTTGGAAGACATCTT+CGG	-	chr4.2:35492733-35492752	None:intergenic	30.0%
	TCAAGCAAGAAGTTATATGT+TGG	-	chr4.2:35492746-35492765	None:intergenic	30.0%
	TTCAACAAGTCTTGAAATGA+AGG	-	chr4.2:35492651-35492670	None:intergenic	30.0%
	TTTGGATATGATCATCCAAT+GGG	+	chr4.2:35492687-35492706	MS.gene062962:CDS	30.0%
!!	ATTTCAAGACTTGTTGAATC+AGG	+	chr4.2:35492653-35492672	MS.gene062962:CDS	30.0%
	ACAAGTCTTGAAATGAAGGT+TGG	-	chr4.2:35492647-35492666	None:intergenic	35.0%
	CGTTTACACACCATTCTAAA+GGG	+	chr4.2:35492507-35492526	MS.gene062962:CDS	35.0%
	GTTTGGATATGATCATCCAA+TGG	+	chr4.2:35492686-35492705	MS.gene062962:CDS	35.0%
!	AGTTACTGAACCCTTTAGAA+TGG	-	chr4.2:35492520-35492539	None:intergenic	35.0%
!!	CCTTTAGAATGGTGTGTAAA+CGG	-	chr4.2:35492509-35492528	None:intergenic	35.0%
!!	GGTTGGTTTAAGTATGAAAC+AGG	-	chr4.2:35492630-35492649	None:intergenic	35.0%
	AATCAGGCTGAAGAAGAGTT+TGG	+	chr4.2:35492669-35492688	MS.gene062962:CDS	40.0%
	CCGTTTACACACCATTCTAA+AGG	+	chr4.2:35492506-35492525	MS.gene062962:CDS	40.0%
	GGATATGATCATCCAATGGG+TGG	+	chr4.2:35492690-35492709	MS.gene062962:CDS	45.0%
	GACATCTTCGGAGCAAGGAA+TGG	-	chr4.2:35492721-35492740	None:intergenic	50.0%
	GGCTATGTTGCAGCGTATGT+TGG	+	chr4.2:35492579-35492598	MS.gene062962:CDS	50.0%
	TGGAAGACATCTTCGGAGCA+AGG	-	chr4.2:35492726-35492745	None:intergenic	50.0%
	CTTCGGAGCAAGGAATGGTG+AGG	-	chr4.2:35492716-35492735	None:intergenic	55.0%
	GGAATGGTGAGGCCACCCAT+TGG	-	chr4.2:35492705-35492724	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.2	gene	35492498	35492776	35492498	ID=MS.gene062962
chr4.2	mRNA	35492498	35492776	35492498	ID=MS.gene062962.t1;Parent=MS.gene062962
chr4.2	exon	35492498	35492776	35492498	ID=MS.gene062962.t1.exon1;Parent=MS.gene062962.t1
chr4.2	CDS	35492498	35492776	35492498	ID=cds.MS.gene062962.t1;Parent=MS.gene062962.t1

Gene Sequence	>MS.gene062962 ATGGGTTTCCGTTTACACACCATTCTAAAGGGTTCAGTAACTTCTAGTCAAGCAAAATCAAAATCTGTAGAAGTGATAAAAGGCTATGTTGCAGCGTATGTTGGAGAGAAACTGACACAGTTTGTAGTTCCTGTTTCATACTTAAACCAACCTTCATTTCAAGACTTGTTGAATCAGGCTGAAGAAGAGTTTGGATATGATCATCCAATGGGTGGCCTCACCATTCCTTGCTCCGAAGATGTCTTCCAACATATAACTTCTTGCTTGAATGGGCTATGA
Protein sequence	>MS.gene062962.t1 MGFRLHTILKGSVTSSQAKSKSVEVIKGYVAAYVGEKLTQFVVPVSYLNQPSFQDLLNQAEEEFGYDHPMGGLTIPCSEDVFQHITSCLNGL