AlfalfaGEDB | MS.gene062967

M. sativa cultivar XinJiangDaYe / MS.gene062967

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062967.t1	PNY03825.1	85.9	92	13	0	1	92	1	92	1.10E-37	165.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062967.t1	P33083	71.1	90	26	0	1	90	1	90	1.3e-31	136.7

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062967.t1	A0A2K3NLB0	85.9	92	13	0	1	92	1	92	7.7e-38	165.6

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene057804	MS.gene062967	0.977874	1.16E-144	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene045362	MS.gene062967	PPI
MS.gene062967	MS.gene014669	PPI
MS.gene062967	MS.gene057808	PPI
MS.gene003587	MS.gene062967	PPI
MS.gene003590	MS.gene062967	PPI
MS.gene062943	MS.gene062967	PPI
MS.gene063112	MS.gene062967	PPI
MS.gene062967	MS.gene68163	PPI
MS.gene003608	MS.gene062967	PPI
MS.gene062967	MS.gene057818	PPI
MS.gene77526	MS.gene062967	PPI
MS.gene062967	MS.gene79889	PPI
MS.gene062967	MS.gene045368	PPI
MS.gene045360	MS.gene062967	PPI
MS.gene062967	MS.gene014222	PPI
MS.gene062967	MS.gene79888	PPI
MS.gene062967	MS.gene75678	PPI
MS.gene062967	MS.gene01764	PPI
MS.gene75677	MS.gene062967	PPI
MS.gene062967	MS.gene031199	PPI
MS.gene003625	MS.gene062967	PPI
MS.gene062967	MS.gene79885	PPI
MS.gene045361	MS.gene062967	PPI
MS.gene50675	MS.gene062967	PPI
MS.gene062967	MS.gene031198	PPI
MS.gene003591	MS.gene062967	PPI
MS.gene062967	MS.gene50764	PPI
MS.gene062979	MS.gene062967	PPI
MS.gene01358	MS.gene062967	PPI
MS.gene062967	MS.gene003577	PPI
MS.gene062967	MS.gene50654	PPI
MS.gene40326	MS.gene062967	PPI
MS.gene062952	MS.gene062967	PPI
MS.gene062967	MS.gene014670	PPI
MS.gene062967	MS.gene77524	PPI
MS.gene50676	MS.gene062967	PPI
MS.gene23370	MS.gene062967	PPI
MS.gene50766	MS.gene062967	PPI
MS.gene77529	MS.gene062967	PPI
MS.gene014667	MS.gene062967	PPI
MS.gene003594	MS.gene062967	PPI
MS.gene062967	MS.gene79887	PPI
MS.gene062967	MS.gene75314	PPI
MS.gene50665	MS.gene062967	PPI
MS.gene50677	MS.gene062967	PPI
MS.gene062967	MS.gene75679	PPI
MS.gene003586	MS.gene062967	PPI
MS.gene062967	MS.gene40325	PPI
MS.gene062988	MS.gene062967	PPI
MS.gene75673	MS.gene062967	PPI
MS.gene062967	MS.gene68760	PPI
MS.gene50763	MS.gene062967	PPI
MS.gene062967	MS.gene057797	PPI
MS.gene062967	MS.gene003614	PPI
MS.gene062967	MS.gene014668	PPI
MS.gene045365	MS.gene062967	PPI
MS.gene062967	MS.gene77528	PPI
MS.gene062967	MS.gene79886	PPI
MS.gene062967	MS.gene014671	PPI
MS.gene062967	MS.gene50765	PPI
MS.gene062967	MS.gene003596	PPI
MS.gene50659	MS.gene062967	PPI
MS.gene062967	MS.gene23371	PPI
MS.gene062967	MS.gene75672	PPI
MS.gene75316	MS.gene062967	PPI
MS.gene057790	MS.gene062967	PPI
MS.gene062967	MS.gene062974	PPI
MS.gene003624	MS.gene062967	PPI
MS.gene062967	MS.gene003583	PPI
MS.gene062967	MS.gene062951	PPI
MS.gene062967	MS.gene057801	PPI
MS.gene062967	MS.gene77527	PPI
MS.gene062967	MS.gene79891	PPI
MS.gene031201	MS.gene062967	PPI
MS.gene062967	MS.gene057795	PPI
MS.gene062967	MS.gene68162	PPI
MS.gene062967	MS.gene045367	PPI
MS.gene062967	MS.gene045364	PPI
MS.gene062967	MS.gene045363	PPI
MS.gene062967	MS.gene75675	PPI
MS.gene062967	MS.gene50652	PPI
MS.gene062967	MS.gene68761	PPI
MS.gene062967	MS.gene002380	PPI
MS.gene77523	MS.gene062967	PPI
MS.gene057778	MS.gene062967	PPI
MS.gene062967	MS.gene68165	PPI
MS.gene045366	MS.gene062967	PPI
MS.gene062963	MS.gene062967	PPI
MS.gene062967	MS.gene50684	PPI
MS.gene75674	MS.gene062967	PPI
MS.gene79890	MS.gene062967	PPI
MS.gene003615	MS.gene062967	PPI
MS.gene062967	MS.gene75315	PPI
MS.gene062967	MS.gene68164	PPI
MS.gene062973	MS.gene062967	PPI
MS.gene003602	MS.gene062967	PPI
MS.gene23372	MS.gene062967	PPI
MS.gene047517	MS.gene062967	PPI
MS.gene062967	MS.gene68759	PPI
MS.gene003627	MS.gene062967	PPI
MS.gene062967	MS.gene031200	PPI
MS.gene062984	MS.gene062967	PPI
MS.gene062967	MS.gene75676	PPI
MS.gene40327	MS.gene062967	PPI
MS.gene062967	MS.gene50687	PPI
MS.gene062967	MS.gene014223	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062967.t1	MTR_4g072620	82.609	92	16	0	1	92	1	92	6.61e-55	165
MS.gene062967.t1	MTR_4g072460	82.609	92	16	0	1	92	1	92	9.50e-55	164
MS.gene062967.t1	MTR_4g072680	82.609	92	16	0	1	92	1	92	1.22e-54	164
MS.gene062967.t1	MTR_4g072730	83.516	91	15	0	1	91	1	91	1.33e-54	164
MS.gene062967.t1	MTR_4g072480	81.522	92	17	0	1	92	1	92	3.43e-54	163
MS.gene062967.t1	MTR_4g072570	77.174	92	21	0	1	92	1	92	3.61e-51	155
MS.gene062967.t1	MTR_4g072660	78.261	92	15	1	1	92	1	87	4.90e-49	150
MS.gene062967.t1	MTR_4g072500	76.087	92	22	0	1	92	1	92	5.88e-49	150
MS.gene062967.t1	MTR_3g084180	71.739	92	26	0	1	92	1	92	4.24e-48	148
MS.gene062967.t1	MTR_3g084150	70.652	92	27	0	1	92	1	92	3.27e-47	145
MS.gene062967.t1	MTR_4g072530	75.556	90	22	0	1	90	1	90	8.44e-47	144
MS.gene062967.t1	MTR_4g072310	68.817	93	28	1	1	92	1	93	3.30e-46	143
MS.gene062967.t1	MTR_8g461410	69.565	92	28	0	1	92	1	92	5.30e-46	142
MS.gene062967.t1	MTR_4g072880	67.742	93	29	1	1	92	1	93	4.44e-45	140
MS.gene062967.t1	MTR_4g072230	70.968	93	24	2	1	92	1	91	9.63e-45	139
MS.gene062967.t1	MTR_4g072640	71.111	90	26	0	1	90	1	90	2.16e-44	139
MS.gene062967.t1	MTR_4g072250	68.817	93	27	2	1	92	1	92	3.83e-44	138
MS.gene062967.t1	MTR_3g117630	72.222	90	25	0	1	90	1	90	4.92e-44	137
MS.gene062967.t1	MTR_4g072270	67.742	93	29	1	1	92	1	93	1.39e-43	136
MS.gene062967.t1	MTR_3g084240	66.304	92	31	0	1	92	1	92	8.44e-43	134
MS.gene062967.t1	MTR_4g072240	64.835	91	31	1	1	90	1	91	1.39e-42	134
MS.gene062967.t1	MTR_3g110032	68.817	93	28	1	1	92	1	93	1.92e-42	134
MS.gene062967.t1	MTR_3g084170	66.304	92	31	0	1	92	1	92	2.03e-42	134
MS.gene062967.t1	MTR_3g084260	67.742	93	29	1	1	92	1	93	2.14e-42	134
MS.gene062967.t1	MTR_4g072220	64.835	91	31	1	1	90	1	91	7.72e-42	132
MS.gene062967.t1	MTR_3g084250	66.304	92	31	0	1	92	1	92	8.00e-42	132
MS.gene062967.t1	MTR_4g072860	66.667	93	30	1	1	92	1	93	1.21e-41	132
MS.gene062967.t1	MTR_5g008360	73.750	80	21	0	13	92	4	83	1.31e-41	131
MS.gene062967.t1	MTR_4g072550	82.192	73	13	0	20	92	31	103	1.31e-41	132
MS.gene062967.t1	MTR_4g072370	67.778	90	27	1	1	90	1	88	1.85e-41	131
MS.gene062967.t1	MTR_4g072300	62.637	91	33	1	1	90	1	91	1.89e-41	131
MS.gene062967.t1	MTR_3g110038	65.556	90	31	0	1	90	1	90	5.39e-41	130
MS.gene062967.t1	MTR_4g072330	64.444	90	30	1	1	90	1	88	1.00e-40	129
MS.gene062967.t1	MTR_3g084220	65.217	92	32	0	1	92	1	92	1.56e-40	129
MS.gene062967.t1	MTR_4g050700	65.591	93	31	1	1	92	1	93	1.58e-40	129
MS.gene062967.t1	MTR_2g012410	65.591	93	31	1	1	92	1	93	1.58e-40	129
MS.gene062967.t1	MTR_4g072870	63.736	91	32	1	1	90	1	91	1.75e-40	129
MS.gene062967.t1	MTR_3g110042	68.966	87	27	0	1	87	1	87	2.45e-40	128
MS.gene062967.t1	MTR_4g072580	65.556	90	26	1	1	90	1	85	3.58e-40	127
MS.gene062967.t1	MTR_4g072890	62.637	91	33	1	1	90	1	91	1.98e-39	126
MS.gene062967.t1	MTR_4g072830	66.292	89	28	1	1	89	1	87	2.31e-39	125
MS.gene062967.t1	MTR_4g072260	60.215	93	36	1	1	92	1	93	3.79e-39	125
MS.gene062967.t1	MTR_4g072850	67.391	92	28	1	1	90	1	92	3.90e-39	125
MS.gene062967.t1	MTR_4g072470	63.333	90	28	1	1	90	1	85	4.92e-38	122
MS.gene062967.t1	MTR_4g072740	63.333	90	28	1	1	90	1	85	8.42e-38	122
MS.gene062967.t1	MTR_4g072610	64.444	90	26	1	1	90	1	84	2.27e-37	120
MS.gene062967.t1	MTR_4g072600	66.667	87	24	1	1	87	1	82	3.22e-37	120
MS.gene062967.t1	MTR_4g072490	61.111	90	30	1	1	90	1	85	3.82e-37	120
MS.gene062967.t1	MTR_4g072630	61.111	90	31	1	1	90	1	86	4.07e-37	120
MS.gene062967.t1	MTR_3g084210	63.043	92	34	0	1	92	1	92	4.95e-37	120
MS.gene062967.t1	MTR_5g008370	73.333	75	20	0	18	92	18	92	5.91e-37	121
MS.gene062967.t1	MTR_3g084190	64.444	90	32	0	1	90	1	90	2.35e-36	118
MS.gene062967.t1	MTR_4g072820	62.637	91	27	2	1	90	1	85	2.48e-36	118
MS.gene062967.t1	MTR_8g461420	61.957	92	35	0	1	92	1	92	4.25e-36	117
MS.gene062967.t1	MTR_4g072940	72.222	72	20	0	21	92	53	124	6.08e-36	118
MS.gene062967.t1	MTR_4g072650	61.111	90	29	1	1	90	1	84	1.42e-35	116
MS.gene062967.t1	MTR_4g072540	72.857	70	19	0	21	90	17	86	1.64e-35	116
MS.gene062967.t1	MTR_3g110045	65.909	88	30	0	3	90	62	149	1.81e-35	118
MS.gene062967.t1	MTR_4g072465	57.778	90	34	1	1	90	1	86	2.08e-35	115
MS.gene062967.t1	MTR_3g084230	60.870	92	36	0	1	92	1	92	4.68e-35	115
MS.gene062967.t1	MTR_3g084160	62.222	90	34	0	1	90	1	90	7.93e-35	114
MS.gene062967.t1	MTR_4g072670	71.429	70	20	0	21	90	17	86	2.51e-34	113
MS.gene062967.t1	MTR_4g072720	61.111	90	31	1	1	90	1	86	3.03e-33	110
MS.gene062967.t1	MTR_4g072510	70.000	70	21	0	21	90	17	86	1.09e-32	108
MS.gene062967.t1	MTR_4g072380	60.440	91	30	2	1	90	1	86	3.78e-32	107
MS.gene062967.t1	MTR_4g072590	67.647	68	22	0	23	90	18	85	1.09e-31	106
MS.gene062967.t1	MTR_4g072910	57.831	83	34	1	9	90	18	100	2.35e-31	106
MS.gene062967.t1	MTR_5g008350	62.025	79	25	1	1	79	1	74	3.29e-31	105
MS.gene062967.t1	MTR_4g072690	69.118	68	21	0	23	90	18	85	5.13e-31	104
MS.gene062967.t1	MTR_4g072560	55.422	83	36	1	8	89	15	97	2.50e-30	103
MS.gene062967.t1	MTR_4g072980	52.688	93	38	2	1	92	8	95	2.80e-30	103
MS.gene062967.t1	MTR_3g110035	54.023	87	35	1	6	92	57	138	1.14e-29	103
MS.gene062967.t1	MTR_4g072450	66.176	68	23	0	23	90	18	85	3.49e-29	100
MS.gene062967.t1	MTR_4g072770	55.556	90	30	1	1	90	1	80	4.19e-29	99.8
MS.gene062967.t1	MTR_4g072290	52.688	93	29	2	1	92	1	79	4.38e-29	99.8
MS.gene062967.t1	MTR_3g117640	67.647	68	21	1	25	91	34	101	5.91e-29	100
MS.gene062967.t1	MTR_4g072750	63.514	74	25	1	1	72	1	74	7.85e-29	99.4
MS.gene062967.t1	MTR_3g084200	56.944	72	31	0	1	72	1	72	9.56e-27	94.7
MS.gene062967.t1	MTR_4g072280	56.000	75	32	1	1	74	1	75	3.87e-25	89.7
MS.gene062967.t1	MTR_6g077850	50.746	67	33	0	24	90	33	99	1.51e-23	86.3
MS.gene062967.t1	MTR_3g113310	56.923	65	27	1	23	87	40	103	1.61e-23	86.7
MS.gene062967.t1	MTR_3g117610	60.000	65	25	1	23	87	43	106	7.00e-23	85.1
MS.gene062967.t1	MTR_4g072190	58.209	67	27	1	21	87	32	97	1.02e-22	84.3
MS.gene062967.t1	MTR_4g072930	54.412	68	27	1	27	90	43	110	4.84e-21	80.5
MS.gene062967.t1	MTR_8g461400	45.652	92	24	1	1	92	1	66	3.31e-20	77.0
MS.gene062967.t1	MTR_8g076040	54.688	64	28	1	24	87	40	102	3.56e-19	75.5
MS.gene062967.t1	MTR_5g021820	51.562	64	30	1	24	87	39	101	6.45e-19	74.7
MS.gene062967.t1	MTR_8g461210	44.318	88	46	2	6	91	16	102	1.25e-17	72.0
MS.gene062967.t1	MTR_2g043960	46.377	69	36	1	17	85	68	135	5.43e-16	68.9
MS.gene062967.t1	MTR_4g124750	48.438	64	32	1	24	87	68	130	1.09e-15	67.8
MS.gene062967.t1	MTR_4g005310	46.970	66	34	1	21	85	58	123	2.22e-15	67.0
MS.gene062967.t1	MTR_4g072840	39.560	91	23	3	1	90	1	60	8.36e-15	63.2
MS.gene062967.t1	MTR_1g009150	46.154	78	37	2	12	85	54	130	8.97e-15	65.9
MS.gene062967.t1	MTR_3g092220	40.000	85	45	3	1	83	12	92	1.40e-14	63.9
MS.gene062967.t1	MTR_1g094750	40.000	85	46	2	5	85	26	109	1.57e-14	63.9
MS.gene062967.t1	MTR_1g024085	45.333	75	40	1	9	83	21	94	2.66e-14	63.9
MS.gene062967.t1	MTR_7g118010	49.231	65	30	2	25	87	23	86	5.58e-14	62.4
MS.gene062967.t1	MTR_4g025830	45.588	68	33	2	25	89	79	145	1.17e-13	62.8
MS.gene062967.t1	MTR_1g061570	42.647	68	38	1	24	91	18	84	1.96e-13	61.2
MS.gene062967.t1	MTR_4g072160	47.143	70	36	1	16	85	28	96	2.82e-13	61.2
MS.gene062967.t1	MTR_4g005320	47.541	61	31	1	25	85	70	129	3.07e-13	61.6
MS.gene062967.t1	MTR_0388s0020	43.210	81	41	3	10	87	61	139	3.19e-13	61.2
MS.gene062967.t1	MTR_8g026730	49.206	63	29	2	25	85	27	88	4.30e-13	60.1
MS.gene062967.t1	MTR_1g059770	45.000	60	32	1	28	87	52	110	6.35e-13	60.1
MS.gene062967.t1	MTR_3g109160	41.250	80	46	1	12	91	56	134	7.29e-13	60.8
MS.gene062967.t1	MTR_3g097120	40.789	76	36	2	21	88	5	79	1.54e-12	58.5
MS.gene062967.t1	MTR_8g101520	37.931	87	49	2	7	89	28	113	2.52e-12	59.3
MS.gene062967.t1	MTR_1g063950	44.068	59	32	1	24	82	47	104	3.68e-12	58.2
MS.gene062967.t1	MTR_2g066830	39.474	76	45	1	10	85	43	117	4.75e-12	58.2
MS.gene062967.t1	MTR_7g104950	38.356	73	43	2	16	87	40	111	6.91e-12	57.4
MS.gene062967.t1	MTR_7g104940	37.681	69	42	1	19	87	44	111	1.31e-11	56.6
MS.gene062967.t1	MTR_8g101530	39.706	68	40	1	20	87	35	101	1.68e-11	56.6
MS.gene062967.t1	MTR_4g021810	48.387	62	30	2	25	85	26	86	1.71e-11	55.8
MS.gene062967.t1	MTR_7g101740	42.188	64	36	1	24	87	39	101	2.09e-11	55.8
MS.gene062967.t1	MTR_2g095430	38.750	80	41	3	5	77	22	100	3.27e-11	55.8
MS.gene062967.t1	MTR_8g094980	39.241	79	34	3	23	88	1	78	3.58e-11	55.1
MS.gene062967.t1	MTR_3g098970	32.051	78	52	1	15	92	43	119	5.59e-11	55.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062967.t1	AT4G38840	72.059	68	18	1	24	90	32	99	2.75e-33	110
MS.gene062967.t1	AT5G18020	54.945	91	39	2	1	90	1	90	1.25e-32	108
MS.gene062967.t1	AT4G34770	58.427	89	35	1	5	91	15	103	1.08e-31	107
MS.gene062967.t1	AT5G18080	54.023	87	39	1	5	90	4	90	8.42e-31	104
MS.gene062967.t1	AT5G18060	52.273	88	37	2	7	89	2	89	2.39e-30	103
MS.gene062967.t1	AT2G21200	55.294	85	36	2	7	89	2	86	4.29e-30	102
MS.gene062967.t1	AT5G18030	51.724	87	39	2	7	90	2	88	8.58e-30	102
MS.gene062967.t1	AT5G18050	51.724	87	41	1	5	90	4	90	1.27e-29	101
MS.gene062967.t1	AT3G03840	61.644	73	26	1	21	91	23	95	5.06e-29	100
MS.gene062967.t1	AT2G21210	48.421	95	44	2	1	90	1	95	6.15e-29	100
MS.gene062967.t1	AT5G18010	50.549	91	43	2	1	90	1	90	6.66e-29	99.8
MS.gene062967.t1	AT2G21210	48.421	95	44	2	1	90	68	162	3.64e-28	100
MS.gene062967.t1	AT4G34800	58.442	77	29	1	9	82	5	81	6.45e-28	97.4
MS.gene062967.t1	AT4G38825	56.000	75	32	1	17	90	15	89	1.38e-27	96.3
MS.gene062967.t1	AT4G38850	55.952	84	33	2	9	88	4	87	2.09e-27	95.9
MS.gene062967.t1	AT4G34810	67.143	70	18	2	25	89	48	117	2.60e-27	96.7
MS.gene062967.t1	AT3G03850	65.672	67	21	1	27	91	27	93	2.66e-27	95.9
MS.gene062967.t1	AT3G03820	55.172	87	33	2	8	91	13	96	3.97e-27	95.5
MS.gene062967.t1	AT4G13790	53.846	78	34	1	13	88	13	90	1.07e-25	91.7
MS.gene062967.t1	AT4G34780	61.972	71	24	1	23	90	26	96	1.14e-24	89.4
MS.gene062967.t1	AT3G03830	48.315	89	43	1	5	90	4	92	1.15e-24	89.0
MS.gene062967.t1	AT4G34790	64.615	65	21	1	25	87	39	103	3.25e-24	88.2
MS.gene062967.t1	AT4G34760	58.462	65	26	1	23	87	41	104	5.78e-22	82.8
MS.gene062967.t1	AT4G38860	56.923	65	28	0	23	87	38	102	8.95e-22	82.0
MS.gene062967.t1	AT2G21220	56.923	65	27	1	23	87	38	101	1.87e-21	81.3
MS.gene062967.t1	AT1G75580	60.000	65	25	1	23	87	42	105	2.15e-21	81.3
MS.gene062967.t1	AT2G16580	53.846	65	29	1	23	87	42	105	1.14e-18	74.3
MS.gene062967.t1	AT4G36110	53.030	66	30	1	24	89	39	103	2.31e-18	73.6
MS.gene062967.t1	AT1G19830	52.308	65	30	1	23	87	46	109	4.76e-18	72.8
MS.gene062967.t1	AT2G18010	51.515	66	31	1	24	89	47	111	1.82e-17	71.2
MS.gene062967.t1	AT3G20220	50.000	66	31	2	25	89	47	111	3.56e-17	70.9
MS.gene062967.t1	AT3G43120	40.964	83	48	1	3	85	57	138	1.56e-16	70.1
MS.gene062967.t1	AT5G20810	50.000	62	30	1	24	85	78	138	2.74e-15	67.0
MS.gene062967.t1	AT5G20810	50.000	62	30	1	24	85	78	138	4.46e-15	67.0
MS.gene062967.t1	AT5G66260	48.485	66	33	1	25	90	34	98	1.13e-14	63.9
MS.gene062967.t1	AT2G46690	38.372	86	49	2	9	91	8	92	1.36e-14	64.3
MS.gene062967.t1	AT1G75590	53.333	60	27	1	24	83	41	99	1.74e-14	64.7
MS.gene062967.t1	AT3G12830	44.304	79	42	2	7	85	33	109	2.65e-14	63.9
MS.gene062967.t1	AT3G51200	49.123	57	28	1	26	82	41	96	2.77e-14	63.2
MS.gene062967.t1	AT5G10990	51.667	60	28	1	24	83	40	98	3.84e-14	63.5
MS.gene062967.t1	AT1G19840	53.333	60	27	1	24	83	40	98	1.21e-13	62.4
MS.gene062967.t1	AT3G61900	40.217	92	45	3	8	90	7	97	1.71e-13	61.6
MS.gene062967.t1	AT4G34750	45.312	64	34	1	24	87	36	98	3.60e-13	61.2
MS.gene062967.t1	AT4G34750	45.312	64	34	1	24	87	36	98	3.60e-13	61.2
MS.gene062967.t1	AT4G31320	45.455	66	35	1	20	85	75	139	7.57e-13	61.2
MS.gene062967.t1	AT2G37030	41.791	67	38	1	16	82	40	105	1.34e-12	59.3
MS.gene062967.t1	AT3G60690	41.667	72	38	2	21	89	84	154	2.06e-12	59.7
MS.gene062967.t1	AT2G24400	49.180	61	30	1	25	85	64	123	3.08e-12	59.3
MS.gene062967.t1	AT5G53590	38.636	88	47	3	3	85	25	110	3.98e-12	58.5
MS.gene062967.t1	AT2G45210	38.889	72	40	2	21	89	75	145	4.20e-12	58.9
MS.gene062967.t1	AT3G09870	45.714	70	35	2	18	85	38	106	6.06e-12	57.4
MS.gene062967.t1	AT4G00880	48.438	64	30	2	24	85	27	89	8.55e-12	57.0
MS.gene062967.t1	AT1G56150	47.541	61	31	1	25	85	38	97	7.32e-11	54.3

Find 22 sgRNAs with CRISPR-Local

Find 24 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CACATAACATCTCGCTTTAA+TGG	0.176390	4.2:-35485234	MS.gene062967:CDS
CTTAAACGAACCATCATTTC+AGG	0.258113	4.2:-35485343	MS.gene062967:CDS
CTCTTAGAATAGTGTGTAAA+TGG	0.279923	4.2:+35485475	None:intergenic
ACATAACATCTCGCTTTAAT+GGG	0.296469	4.2:-35485233	MS.gene062967:CDS
AATCAAGCTGAGGAAGAGTT+TGG	0.326184	4.2:-35485312	MS.gene062967:CDS
AAAATCTGTTGAAGTAAGAA+AGG	0.441806	4.2:-35485424	MS.gene062967:CDS
GGATATGTTGCAGTGTATGT+TGG	0.538211	4.2:-35485402	MS.gene062967:CDS
GACATCTTCGGTACAAGGAA+TGG	0.540589	4.2:+35485263	None:intergenic
TGGAAGACATCTTCGGTACA+AGG	0.542793	4.2:+35485258	None:intergenic
AAATCTGTTGAAGTAAGAAA+GGG	0.544718	4.2:-35485423	MS.gene062967:CDS
TTTGGATATGATCATCCAAT+GGG	0.545525	4.2:-35485294	MS.gene062967:CDS
GTTTGGATATGATCATCCAA+TGG	0.573812	4.2:-35485295	MS.gene062967:CDS
GGAATGGTGAGGCCACCCAT+TGG	0.574145	4.2:+35485279	None:intergenic
TATGTGTTGGAAGACATCTT+CGG	0.578273	4.2:+35485251	None:intergenic
TAAAGCGAGATGTTATGTGT+TGG	0.579913	4.2:+35485238	None:intergenic
GGTTCGTTTAAGTATGACAC+AGG	0.607652	4.2:+35485354	None:intergenic
CATAACATCTCGCTTTAATG+GGG	0.610636	4.2:-35485232	MS.gene062967:CDS
ATGTTGGAGAGGAACACAAA+CGG	0.630935	4.2:-35485386	MS.gene062967:CDS
TGTTGCAGTGTATGTTGGAG+AGG	0.641595	4.2:-35485397	MS.gene062967:CDS
GGATATGATCATCCAATGGG+TGG	0.648071	4.2:-35485291	MS.gene062967:CDS
CTTCGGTACAAGGAATGGTG+AGG	0.686019	4.2:+35485268	None:intergenic
GTTCGTTTAAGTATGACACA+GGG	0.737905	4.2:+35485355	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	AAAATCTGTTGAAGTAAGAA+AGG	-	chr4.2:35485286-35485305	MS.gene062967:CDS	25.0%
!	AAATCTGTTGAAGTAAGAAA+GGG	-	chr4.2:35485287-35485306	MS.gene062967:CDS	25.0%
!	TTCAAAAAATCCTGAAATGA+TGG	+	chr4.2:35485380-35485399	None:intergenic	25.0%
	ACATAACATCTCGCTTTAAT+GGG	-	chr4.2:35485477-35485496	MS.gene062967:CDS	30.0%
	CTCTTAGAATAGTGTGTAAA+TGG	+	chr4.2:35485238-35485257	None:intergenic	30.0%
	TTTGGATATGATCATCCAAT+GGG	-	chr4.2:35485416-35485435	MS.gene062967:CDS	30.0%
	CACATAACATCTCGCTTTAA+TGG	-	chr4.2:35485476-35485495	MS.gene062967:CDS	35.0%
	CATAACATCTCGCTTTAATG+GGG	-	chr4.2:35485478-35485497	MS.gene062967:CDS	35.0%
	CTTAAACGAACCATCATTTC+AGG	-	chr4.2:35485367-35485386	MS.gene062967:CDS	35.0%
	GTTCGTTTAAGTATGACACA+GGG	+	chr4.2:35485358-35485377	None:intergenic	35.0%
	GTTTGGATATGATCATCCAA+TGG	-	chr4.2:35485415-35485434	MS.gene062967:CDS	35.0%
	TAAAGCGAGATGTTATGTGT+TGG	+	chr4.2:35485475-35485494	None:intergenic	35.0%
	TATGTGTTGGAAGACATCTT+CGG	+	chr4.2:35485462-35485481	None:intergenic	35.0%
!!!	GGATTTTTTGAATCAAGCTG+AGG	-	chr4.2:35485388-35485407	MS.gene062967:CDS	35.0%
	AATCAAGCTGAGGAAGAGTT+TGG	-	chr4.2:35485398-35485417	MS.gene062967:CDS	40.0%
	ATGTTGGAGAGGAACACAAA+CGG	-	chr4.2:35485324-35485343	MS.gene062967:CDS	40.0%
	GGATATGTTGCAGTGTATGT+TGG	-	chr4.2:35485308-35485327	MS.gene062967:CDS	40.0%
	GGTTCGTTTAAGTATGACAC+AGG	+	chr4.2:35485359-35485378	None:intergenic	40.0%
	GACATCTTCGGTACAAGGAA+TGG	+	chr4.2:35485450-35485469	None:intergenic	45.0%
	GGATATGATCATCCAATGGG+TGG	-	chr4.2:35485419-35485438	MS.gene062967:CDS	45.0%
	TGGAAGACATCTTCGGTACA+AGG	+	chr4.2:35485455-35485474	None:intergenic	45.0%
	TGTTGCAGTGTATGTTGGAG+AGG	-	chr4.2:35485313-35485332	MS.gene062967:CDS	45.0%
	CTTCGGTACAAGGAATGGTG+AGG	+	chr4.2:35485445-35485464	None:intergenic	50.0%
	GGAATGGTGAGGCCACCCAT+TGG	+	chr4.2:35485434-35485453	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.2	gene	35485227	35485505	35485227	ID=MS.gene062967
chr4.2	mRNA	35485227	35485505	35485227	ID=MS.gene062967.t1;Parent=MS.gene062967
chr4.2	exon	35485227	35485505	35485227	ID=MS.gene062967.t1.exon1;Parent=MS.gene062967.t1
chr4.2	CDS	35485227	35485505	35485227	ID=cds.MS.gene062967.t1;Parent=MS.gene062967.t1

Gene Sequence	>MS.gene062967 ATGGGTTTCCATTTACACACTATTCTAAGAGCATCAGTAACTGCAAGACAAGCAACAACAAAATCTGTTGAAGTAAGAAAGGGATATGTTGCAGTGTATGTTGGAGAGGAACACAAACGGTTTGTAGTCCCTGTGTCATACTTAAACGAACCATCATTTCAGGATTTTTTGAATCAAGCTGAGGAAGAGTTTGGATATGATCATCCAATGGGTGGCCTCACCATTCCTTGTACCGAAGATGTCTTCCAACACATAACATCTCGCTTTAATGGGGTTTAA
Protein sequence	>MS.gene062967.t1 MGFHLHTILRASVTARQATTKSVEVRKGYVAVYVGEEHKRFVVPVSYLNEPSFQDFLNQAEEEFGYDHPMGGLTIPCTEDVFQHITSRFNGV