AlfalfaGEDB | MS.gene062970

M. sativa cultivar XinJiangDaYe / MS.gene062970

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062970.t1	XP_003607131.1	92	87	7	0	1	87	1	87	9.20E-39	169.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062970.t1	P33080	73.6	91	17	2	1	85	1	90	7.1e-32	137.5

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062970.t1	G7JL53	92.0	87	7	0	1	87	1	87	6.6e-39	169.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene062970	MS.gene062973	PPI
MS.gene062970	MS.gene50652	PPI
MS.gene062970	MS.gene014669	PPI
MS.gene062970	MS.gene057808	PPI
MS.gene062970	MS.gene002380	PPI
MS.gene062970	MS.gene77529	PPI
MS.gene062970	MS.gene77526	PPI
MS.gene062970	MS.gene77523	PPI
MS.gene062970	MS.gene045366	PPI
MS.gene062970	MS.gene045365	PPI
MS.gene062970	MS.gene68163	PPI
MS.gene062970	MS.gene057790	PPI
MS.gene062970	MS.gene75315	PPI
MS.gene062970	MS.gene062952	PPI
MS.gene062970	MS.gene057818	PPI
MS.gene062970	MS.gene68164	PPI
MS.gene062970	MS.gene062979	PPI
MS.gene062970	MS.gene68759	PPI
MS.gene062970	MS.gene003586	PPI
MS.gene062970	MS.gene79889	PPI
MS.gene062970	MS.gene003627	PPI
MS.gene062970	MS.gene031200	PPI
MS.gene062970	MS.gene79888	PPI
MS.gene062970	MS.gene75676	PPI
MS.gene062970	MS.gene40326	PPI
MS.gene062970	MS.gene003590	PPI
MS.gene062970	MS.gene031199	PPI
MS.gene062970	MS.gene50687	PPI
MS.gene062970	MS.gene014223	PPI
MS.gene062970	MS.gene003625	PPI
MS.gene062970	MS.gene50766	PPI
MS.gene062970	MS.gene79885	PPI
MS.gene062970	MS.gene003587	PPI
MS.gene062970	MS.gene047517	PPI
MS.gene062970	MS.gene01358	PPI
MS.gene062970	MS.gene062963	PPI
MS.gene062970	MS.gene063112	PPI
MS.gene062970	MS.gene003602	PPI
MS.gene062970	MS.gene062984	PPI
MS.gene062970	MS.gene045368	PPI
MS.gene062970	MS.gene23370	PPI
MS.gene062970	MS.gene40327	PPI
MS.gene062970	MS.gene045360	PPI
MS.gene062970	MS.gene014222	PPI
MS.gene062970	MS.gene045361	PPI
MS.gene062970	MS.gene50659	PPI
MS.gene062970	MS.gene75678	PPI
MS.gene062970	MS.gene75314	PPI
MS.gene062970	MS.gene01764	PPI
MS.gene062970	MS.gene75673	PPI
MS.gene062970	MS.gene057778	PPI
MS.gene062970	MS.gene50763	PPI
MS.gene062970	MS.gene68760	PPI
MS.gene062970	MS.gene031198	PPI
MS.gene062970	MS.gene50676	PPI
MS.gene062970	MS.gene50764	PPI
MS.gene062970	MS.gene77528	PPI
MS.gene062970	MS.gene75316	PPI
MS.gene062970	MS.gene014671	PPI
MS.gene062970	MS.gene003615	PPI
MS.gene062970	MS.gene003577	PPI
MS.gene062970	MS.gene23371	PPI
MS.gene062970	MS.gene003594	PPI
MS.gene062970	MS.gene75672	PPI
MS.gene062970	MS.gene75674	PPI
MS.gene062970	MS.gene50654	PPI
MS.gene062970	MS.gene50675	PPI
MS.gene062970	MS.gene062974	PPI
MS.gene062970	MS.gene031201	PPI
MS.gene062970	MS.gene014670	PPI
MS.gene062970	MS.gene062943	PPI
MS.gene062970	MS.gene057801	PPI
MS.gene062970	MS.gene77524	PPI
MS.gene062970	MS.gene68162	PPI
MS.gene062970	MS.gene75675	PPI
MS.gene062970	MS.gene79887	PPI
MS.gene062970	MS.gene75679	PPI
MS.gene062970	MS.gene68761	PPI
MS.gene062970	MS.gene40325	PPI
MS.gene062970	MS.gene68165	PPI
MS.gene062970	MS.gene75677	PPI
MS.gene062970	MS.gene50677	PPI
MS.gene062970	MS.gene79890	PPI
MS.gene062970	MS.gene50684	PPI
MS.gene062970	MS.gene057797	PPI
MS.gene062970	MS.gene045362	PPI
MS.gene062970	MS.gene003614	PPI
MS.gene062970	MS.gene23372	PPI
MS.gene062970	MS.gene014668	PPI
MS.gene062970	MS.gene79886	PPI
MS.gene062970	MS.gene50765	PPI
MS.gene062970	MS.gene003596	PPI
MS.gene062970	MS.gene014667	PPI
MS.gene062970	MS.gene062988	PPI
MS.gene062970	MS.gene003624	PPI
MS.gene062970	MS.gene003583	PPI
MS.gene062970	MS.gene062951	PPI
MS.gene062970	MS.gene003608	PPI
MS.gene062970	MS.gene77527	PPI
MS.gene062970	MS.gene003591	PPI
MS.gene062970	MS.gene79891	PPI
MS.gene062970	MS.gene057795	PPI
MS.gene062970	MS.gene045367	PPI
MS.gene062970	MS.gene045364	PPI
MS.gene062970	MS.gene50665	PPI
MS.gene062970	MS.gene045363	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062970.t1	MTR_4g072580	91.954	87	7	0	1	87	1	87	9.19e-56	167
MS.gene062970.t1	MTR_4g072600	89.655	87	9	0	1	87	1	87	9.05e-54	162
MS.gene062970.t1	MTR_4g072740	83.529	85	14	0	1	85	1	85	1.20e-49	151
MS.gene062970.t1	MTR_4g072490	82.353	85	15	0	1	85	1	85	1.74e-49	151
MS.gene062970.t1	MTR_4g072830	84.270	89	11	1	1	86	1	89	6.84e-49	149
MS.gene062970.t1	MTR_4g072370	82.222	90	13	1	1	87	1	90	9.10e-49	149
MS.gene062970.t1	MTR_4g072470	83.529	85	14	0	1	85	1	85	1.37e-48	149
MS.gene062970.t1	MTR_4g072630	81.395	86	15	1	1	85	1	86	2.45e-47	145
MS.gene062970.t1	MTR_4g072330	77.778	90	17	1	1	87	1	90	4.94e-47	145
MS.gene062970.t1	MTR_4g072610	78.161	87	18	1	1	87	1	86	1.59e-45	141
MS.gene062970.t1	MTR_4g072465	76.744	86	19	1	1	85	1	86	4.14e-44	137
MS.gene062970.t1	MTR_4g072650	75.862	87	20	1	1	87	1	86	1.06e-43	136
MS.gene062970.t1	MTR_4g072540	82.558	86	14	1	1	85	1	86	2.98e-43	135
MS.gene062970.t1	MTR_3g084150	71.111	90	21	1	1	85	1	90	7.85e-43	134
MS.gene062970.t1	MTR_4g072670	83.721	86	13	1	1	85	1	86	8.10e-43	134
MS.gene062970.t1	MTR_3g084180	70.000	90	22	1	1	85	1	90	5.07e-42	132
MS.gene062970.t1	MTR_3g110038	71.111	90	21	1	1	85	1	90	6.89e-42	132
MS.gene062970.t1	MTR_3g084170	71.111	90	21	1	1	85	1	90	8.78e-42	132
MS.gene062970.t1	MTR_4g072310	72.527	91	19	1	1	85	1	91	9.45e-42	132
MS.gene062970.t1	MTR_8g461410	68.889	90	23	1	1	85	1	90	1.50e-41	131
MS.gene062970.t1	MTR_4g072690	81.176	85	16	0	1	85	1	85	1.68e-41	130
MS.gene062970.t1	MTR_4g072510	80.233	86	16	1	1	85	1	86	3.16e-41	130
MS.gene062970.t1	MTR_5g008350	82.432	74	13	0	1	74	1	74	3.32e-41	130
MS.gene062970.t1	MTR_4g072820	73.810	84	22	0	1	84	1	84	7.61e-41	129
MS.gene062970.t1	MTR_4g072880	69.231	91	22	1	1	85	1	91	7.68e-41	129
MS.gene062970.t1	MTR_3g084240	70.000	90	22	1	1	85	1	90	9.08e-41	129
MS.gene062970.t1	MTR_4g072870	67.033	91	24	1	1	85	1	91	1.25e-40	129
MS.gene062970.t1	MTR_4g072380	75.904	83	19	1	1	82	1	83	2.71e-40	128
MS.gene062970.t1	MTR_3g110032	69.231	91	22	1	1	85	1	91	3.20e-40	128
MS.gene062970.t1	MTR_4g072220	68.132	91	23	1	1	85	1	91	3.94e-40	127
MS.gene062970.t1	MTR_4g072240	67.033	91	24	1	1	85	1	91	4.14e-40	127
MS.gene062970.t1	MTR_4g072450	80.000	85	17	0	1	85	1	85	4.47e-40	127
MS.gene062970.t1	MTR_4g072250	73.626	91	17	2	1	85	1	90	4.61e-40	127
MS.gene062970.t1	MTR_3g084250	68.889	90	23	1	1	85	1	90	5.80e-40	127
MS.gene062970.t1	MTR_4g072720	77.907	86	18	1	1	85	1	86	7.22e-40	127
MS.gene062970.t1	MTR_4g072660	70.732	82	24	0	1	82	1	82	9.88e-40	126
MS.gene062970.t1	MTR_3g084220	67.778	90	24	1	1	85	1	90	1.85e-39	126
MS.gene062970.t1	MTR_4g072260	65.934	91	25	1	1	85	1	91	3.45e-39	125
MS.gene062970.t1	MTR_4g050700	68.132	91	23	1	1	85	1	91	6.38e-39	124
MS.gene062970.t1	MTR_2g012410	68.132	91	23	1	1	85	1	91	6.38e-39	124
MS.gene062970.t1	MTR_4g072480	66.667	90	25	1	1	85	1	90	8.07e-39	124
MS.gene062970.t1	MTR_4g072590	77.647	85	19	0	1	85	1	85	9.44e-39	124
MS.gene062970.t1	MTR_4g072300	64.835	91	26	1	1	85	1	91	1.01e-38	124
MS.gene062970.t1	MTR_4g072270	69.318	88	21	1	1	82	1	88	1.12e-38	124
MS.gene062970.t1	MTR_4g072890	64.835	91	26	1	1	85	1	91	1.24e-38	124
MS.gene062970.t1	MTR_4g072570	67.778	90	24	1	1	85	1	90	2.21e-38	123
MS.gene062970.t1	MTR_3g117630	73.494	83	16	1	9	85	8	90	2.50e-38	123
MS.gene062970.t1	MTR_4g072230	71.910	89	17	2	1	83	1	87	3.97e-38	122
MS.gene062970.t1	MTR_3g110042	71.264	87	20	1	1	82	1	87	4.14e-38	122
MS.gene062970.t1	MTR_4g072730	65.556	90	26	1	1	85	1	90	6.92e-38	122
MS.gene062970.t1	MTR_4g072620	64.444	90	27	1	1	85	1	90	9.83e-38	121
MS.gene062970.t1	MTR_3g084260	67.033	91	24	1	1	85	1	91	1.21e-37	121
MS.gene062970.t1	MTR_4g072680	64.444	90	27	1	1	85	1	90	2.55e-37	120
MS.gene062970.t1	MTR_4g072860	69.231	91	22	1	1	85	1	91	4.21e-37	120
MS.gene062970.t1	MTR_4g072850	68.817	93	22	1	1	86	1	93	4.39e-37	120
MS.gene062970.t1	MTR_8g461420	65.934	91	26	1	1	86	1	91	6.93e-37	119
MS.gene062970.t1	MTR_3g084190	64.835	91	27	1	1	86	1	91	7.08e-37	119
MS.gene062970.t1	MTR_4g072640	66.304	92	24	2	1	86	1	91	1.53e-36	119
MS.gene062970.t1	MTR_3g084230	64.835	91	27	1	1	86	1	91	2.21e-36	118
MS.gene062970.t1	MTR_4g072500	65.934	91	24	2	1	85	1	90	2.53e-36	118
MS.gene062970.t1	MTR_4g072460	62.222	90	29	1	1	85	1	90	6.63e-36	117
MS.gene062970.t1	MTR_3g084210	64.444	90	27	1	1	85	1	90	1.51e-35	116
MS.gene062970.t1	MTR_3g110045	66.292	89	25	1	3	86	62	150	1.69e-35	118
MS.gene062970.t1	MTR_4g072530	63.736	91	26	2	1	85	1	90	3.24e-35	115
MS.gene062970.t1	MTR_3g084160	62.637	91	29	1	1	86	1	91	1.74e-34	113
MS.gene062970.t1	MTR_4g072940	67.778	90	22	1	3	85	33	122	7.08e-34	113
MS.gene062970.t1	MTR_5g008360	66.667	78	26	0	8	85	4	81	1.97e-33	110
MS.gene062970.t1	MTR_4g072980	56.522	92	32	2	1	84	1	92	6.47e-33	109
MS.gene062970.t1	MTR_4g072770	66.667	84	23	2	1	84	1	79	2.45e-32	107
MS.gene062970.t1	MTR_5g008370	61.957	92	26	2	1	85	1	90	4.26e-32	108
MS.gene062970.t1	MTR_3g117640	66.667	69	22	1	20	87	34	102	3.63e-31	105
MS.gene062970.t1	MTR_4g072560	54.639	97	31	3	1	84	1	97	5.10e-31	105
MS.gene062970.t1	MTR_4g072550	61.446	83	28	1	7	85	19	101	1.91e-30	103
MS.gene062970.t1	MTR_3g084200	68.056	72	18	1	1	67	1	72	2.70e-30	103
MS.gene062970.t1	MTR_4g072910	63.636	77	26	1	9	85	26	100	5.15e-30	102
MS.gene062970.t1	MTR_4g072290	55.294	85	30	1	1	85	1	77	4.57e-27	94.4
MS.gene062970.t1	MTR_3g110035	65.625	64	22	0	22	85	73	136	2.05e-26	94.7
MS.gene062970.t1	MTR_4g072280	58.667	75	25	1	1	69	1	75	1.01e-24	88.6
MS.gene062970.t1	MTR_6g077850	57.143	70	30	0	17	86	31	100	1.97e-24	88.6
MS.gene062970.t1	MTR_4g072750	60.811	74	22	2	1	67	1	74	3.29e-23	84.7
MS.gene062970.t1	MTR_3g113310	56.923	65	27	1	20	84	42	105	1.50e-22	84.0
MS.gene062970.t1	MTR_3g117610	58.209	67	27	1	20	86	45	110	3.90e-22	82.8
MS.gene062970.t1	MTR_4g072930	48.750	80	37	1	10	85	31	110	2.25e-21	80.9
MS.gene062970.t1	MTR_4g072190	48.810	84	38	2	5	84	17	99	4.18e-21	80.1
MS.gene062970.t1	MTR_4g072840	48.810	84	18	2	1	84	1	59	1.12e-18	72.8
MS.gene062970.t1	MTR_5g021820	52.308	65	30	1	20	84	40	103	3.03e-18	72.8
MS.gene062970.t1	MTR_1g009150	55.072	69	30	1	12	80	63	130	3.26e-18	74.7
MS.gene062970.t1	MTR_8g076040	53.968	63	28	1	20	82	41	102	1.94e-17	70.9
MS.gene062970.t1	MTR_1g094750	54.098	61	27	1	20	80	50	109	4.58e-17	70.1
MS.gene062970.t1	MTR_2g043960	56.897	58	24	1	20	77	76	132	5.45e-17	71.2
MS.gene062970.t1	MTR_8g461400	45.556	90	18	2	1	85	1	64	5.51e-17	68.6
MS.gene062970.t1	MTR_4g124750	55.172	58	25	1	20	77	69	125	3.83e-16	68.9
MS.gene062970.t1	MTR_7g118010	47.826	69	33	2	20	86	23	90	4.50e-16	67.4
MS.gene062970.t1	MTR_4g025830	44.928	69	34	2	20	85	79	146	1.40e-15	67.4
MS.gene062970.t1	MTR_4g005310	50.000	62	30	1	20	80	62	123	1.99e-15	67.0
MS.gene062970.t1	MTR_1g063950	53.226	62	26	2	20	80	48	107	2.93e-15	65.9
MS.gene062970.t1	MTR_7g101740	56.250	64	25	2	20	82	40	101	2.99e-15	65.5
MS.gene062970.t1	MTR_8g461210	44.048	84	41	2	8	86	18	100	6.27e-15	64.7
MS.gene062970.t1	MTR_4g021810	52.239	67	30	2	12	77	18	83	1.52e-14	63.5
MS.gene062970.t1	MTR_0388s0020	41.026	78	42	2	11	85	66	142	1.57e-14	64.7
MS.gene062970.t1	MTR_4g005320	50.820	61	29	1	20	80	70	129	1.63e-14	64.7
MS.gene062970.t1	MTR_1g061570	52.459	61	28	1	20	80	19	78	2.20e-14	63.5
MS.gene062970.t1	MTR_8g026730	43.478	69	36	2	20	86	27	94	2.37e-14	63.2
MS.gene062970.t1	MTR_3g092220	38.095	84	49	2	3	84	16	98	2.37e-14	63.2
MS.gene062970.t1	MTR_3g105900	70.732	41	12	0	20	60	1172	1212	4.22e-14	66.2
MS.gene062970.t1	MTR_1g024085	47.761	67	34	1	20	86	37	102	1.43e-13	62.0
MS.gene062970.t1	MTR_3g109160	52.459	61	28	1	20	80	69	128	1.48e-13	62.4
MS.gene062970.t1	MTR_7g405740	39.474	76	45	1	5	80	52	126	2.84e-13	61.6
MS.gene062970.t1	MTR_4g072160	47.761	67	34	1	20	86	37	102	3.08e-13	60.8
MS.gene062970.t1	MTR_2g066830	39.474	76	44	2	2	77	41	114	2.07e-12	58.9
MS.gene062970.t1	MTR_8g101520	43.939	66	36	1	21	86	51	115	2.84e-12	58.9
MS.gene062970.t1	MTR_5g008380	81.250	32	6	0	54	85	246	277	7.75e-12	59.3
MS.gene062970.t1	MTR_1g059770	36.923	65	40	1	20	84	49	112	3.45e-11	55.5
MS.gene062970.t1	MTR_2g095430	41.892	74	34	3	8	73	29	101	5.82e-11	55.1
MS.gene062970.t1	MTR_8g096470	40.909	66	38	1	21	86	47	111	5.82e-11	54.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062970.t1	AT4G38840	71.642	67	18	1	20	85	33	99	1.91e-32	108
MS.gene062970.t1	AT2G21210	60.526	76	28	1	12	85	20	95	2.90e-31	105
MS.gene062970.t1	AT5G18020	59.494	79	31	1	9	86	13	91	7.51e-31	104
MS.gene062970.t1	AT2G21210	60.526	76	28	1	12	85	87	162	1.63e-30	105
MS.gene062970.t1	AT4G34800	59.524	84	30	2	1	80	1	84	2.24e-30	103
MS.gene062970.t1	AT5G18080	59.740	77	30	1	9	84	13	89	3.03e-30	102
MS.gene062970.t1	AT5G18050	58.442	77	31	1	9	84	13	89	6.32e-30	102
MS.gene062970.t1	AT5G18060	67.692	65	20	1	21	84	25	89	7.70e-30	101
MS.gene062970.t1	AT2G21200	60.526	76	29	1	10	84	11	86	9.25e-30	101
MS.gene062970.t1	AT5G18030	58.025	81	33	1	5	84	7	87	1.23e-29	101
MS.gene062970.t1	AT4G38825	51.724	87	33	2	7	84	2	88	3.63e-29	100
MS.gene062970.t1	AT4G34810	66.197	71	19	2	19	84	47	117	3.71e-29	100
MS.gene062970.t1	AT5G18010	57.143	77	32	1	9	84	13	89	1.14e-28	99.0
MS.gene062970.t1	AT4G38850	57.500	80	27	2	8	84	13	88	1.70e-28	98.6
MS.gene062970.t1	AT3G03840	54.651	86	31	2	1	84	14	93	6.29e-28	97.1
MS.gene062970.t1	AT4G34770	64.000	75	25	1	13	85	28	102	8.19e-28	97.1
MS.gene062970.t1	AT4G13790	47.619	84	42	1	3	84	8	91	4.48e-27	94.7
MS.gene062970.t1	AT3G03850	58.537	82	28	2	5	84	14	91	7.46e-27	94.4
MS.gene062970.t1	AT3G03820	55.263	76	31	1	12	84	19	94	1.14e-26	94.0
MS.gene062970.t1	AT4G34780	63.889	72	23	1	18	86	26	97	4.85e-26	92.8
MS.gene062970.t1	AT3G03830	53.012	83	31	2	5	84	14	91	2.40e-24	88.2
MS.gene062970.t1	AT4G34790	61.538	65	23	1	20	82	39	103	3.88e-24	87.8
MS.gene062970.t1	AT4G38860	56.923	65	28	0	20	84	40	104	4.19e-22	82.8
MS.gene062970.t1	AT1G75580	60.000	65	25	1	20	84	44	107	4.64e-21	80.1
MS.gene062970.t1	AT2G21220	53.731	67	30	1	18	84	38	103	4.32e-20	77.4
MS.gene062970.t1	AT4G34760	55.385	65	28	1	20	84	43	106	7.63e-20	77.0
MS.gene062970.t1	AT3G20220	52.174	69	31	2	20	87	47	114	3.02e-18	73.2
MS.gene062970.t1	AT1G19830	57.576	66	26	2	20	84	48	112	1.77e-17	71.2
MS.gene062970.t1	AT2G16580	53.968	63	28	1	20	82	44	105	2.57e-17	70.5
MS.gene062970.t1	AT3G43120	55.172	58	25	1	20	77	79	135	3.23e-17	71.6
MS.gene062970.t1	AT4G36110	52.381	63	29	1	20	82	40	101	5.33e-17	69.7
MS.gene062970.t1	AT5G20810	56.897	58	24	1	20	77	79	135	2.59e-16	69.7
MS.gene062970.t1	AT5G20810	56.897	58	24	1	20	77	79	135	4.83e-16	69.3
MS.gene062970.t1	AT2G37030	53.226	62	28	1	20	81	49	109	9.55e-16	67.0
MS.gene062970.t1	AT2G18010	50.794	63	30	1	20	82	48	109	1.02e-15	66.6
MS.gene062970.t1	AT5G66260	49.333	75	34	2	14	85	25	98	2.56e-15	65.5
MS.gene062970.t1	AT3G51200	47.143	70	35	2	11	80	32	99	8.80e-15	64.3
MS.gene062970.t1	AT4G34750	44.118	68	37	1	20	87	37	103	1.79e-14	64.3
MS.gene062970.t1	AT4G34750	44.118	68	37	1	20	87	37	103	1.79e-14	64.3
MS.gene062970.t1	AT1G75590	51.724	58	27	1	20	77	42	98	4.25e-14	63.5
MS.gene062970.t1	AT2G24400	50.685	73	34	2	9	80	52	123	4.64e-14	63.9
MS.gene062970.t1	AT3G53250	46.774	62	29	1	20	81	52	109	5.29e-14	62.8
MS.gene062970.t1	AT3G53250	46.774	62	29	1	20	81	83	140	6.86e-14	63.2
MS.gene062970.t1	AT4G31320	47.887	71	36	1	10	80	70	139	8.87e-14	63.5
MS.gene062970.t1	AT3G61900	39.286	84	47	2	6	86	16	98	1.15e-13	62.0
MS.gene062970.t1	AT5G10990	50.000	58	28	1	20	77	41	97	1.16e-13	62.4
MS.gene062970.t1	AT4G22620	38.554	83	47	2	6	85	65	146	1.50e-13	62.4
MS.gene062970.t1	AT1G19840	51.724	58	27	1	20	77	41	97	4.53e-13	60.8
MS.gene062970.t1	AT4G12410	39.744	78	43	2	11	85	67	143	4.99e-13	60.8
MS.gene062970.t1	AT4G00880	47.826	69	33	2	20	86	28	95	6.62e-13	59.7
MS.gene062970.t1	AT2G45210	40.580	69	37	2	20	85	79	146	8.19e-13	60.5
MS.gene062970.t1	AT3G60690	42.647	68	35	2	20	84	88	154	1.55e-12	59.7
MS.gene062970.t1	AT2G46690	41.667	72	38	2	9	77	13	83	2.37e-12	58.2
MS.gene062970.t1	AT3G12830	39.474	76	45	1	9	84	39	113	2.62e-12	58.5
MS.gene062970.t1	AT1G56150	40.000	75	44	1	10	84	28	101	2.96e-12	57.8
MS.gene062970.t1	AT2G36210	39.706	68	41	0	20	87	54	121	8.68e-12	57.0
MS.gene062970.t1	AT1G16510	43.077	65	36	1	20	84	54	117	2.18e-11	56.2
MS.gene062970.t1	AT5G03310	43.038	79	35	3	12	80	26	104	5.65e-11	54.7

Find 20 sgRNAs with CRISPR-Local

Find 19 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GGTTGGTTCAAGTATGATAT+TGG	0.247037	4.2:+35476677	None:intergenic
GTTGGTTCAAGTATGATATT+GGG	0.382183	4.2:+35476678	None:intergenic
ATTCGAATTGTTCCTCGGCT+TGG	0.441224	4.2:+35476633	None:intergenic
ATCATATTCGAATTGTTCCT+CGG	0.498996	4.2:+35476628	None:intergenic
CTCGTTTGAGTAGGTGCTAA+CGG	0.521428	4.2:-35476547	None:intergenic
AAAAGATGTGTACGTGCCAA+AGG	0.525194	4.2:-35476747	MS.gene062970:CDS
ATATCACTTCTCGTTTGAGT+AGG	0.532328	4.2:-35476556	MS.gene062970:CDS
GGATATCTTGCAGTATATGT+AGG	0.533794	4.2:-35476725	MS.gene062970:CDS
TATACTGCAAGATATCCCTT+TGG	0.554191	4.2:+35476731	None:intergenic
AAAGATGTGTACGTGCCAAA+GGG	0.557476	4.2:-35476746	MS.gene062970:CDS
ACAAGTCTTGAAACGATGGT+TGG	0.568123	4.2:+35476660	None:intergenic
TTCGAATATGATCATCCAGC+GGG	0.576347	4.2:-35476617	MS.gene062970:CDS
TTCAACAAGTCTTGAAACGA+TGG	0.599919	4.2:+35476656	None:intergenic
AAGAAAACATCTTCTCTACA+AGG	0.601482	4.2:+35476581	None:intergenic
GGAATAGTGAGACCACCCGC+TGG	0.621275	4.2:+35476602	None:intergenic
GATGTCTTTCTGATGATACC+AGG	0.624908	4.2:+35476776	None:intergenic
TCTTGCAGTATATGTAGGAG+AGG	0.631317	4.2:-35476720	MS.gene062970:CDS
AGACTTGTTGAACCAAGCCG+AGG	0.665105	4.2:-35476645	MS.gene062970:CDS
GAATATGATCATCCAGCGGG+TGG	0.676285	4.2:-35476614	MS.gene062970:CDS
ATTCGAATATGATCATCCAG+CGG	0.709307	4.2:-35476618	MS.gene062970:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	AAGAAAACATCTTCTCTACA+AGG	+	chr4.2:35476763-35476782	None:intergenic	30.0%
	ATCATATTCGAATTGTTCCT+CGG	+	chr4.2:35476716-35476735	None:intergenic	30.0%
!	GTTGGTTCAAGTATGATATT+GGG	+	chr4.2:35476666-35476685	None:intergenic	30.0%
	ATATCACTTCTCGTTTGAGT+AGG	-	chr4.2:35476785-35476804	MS.gene062970:CDS	35.0%
	ATTCGAATATGATCATCCAG+CGG	-	chr4.2:35476723-35476742	MS.gene062970:CDS	35.0%
	GGATATCTTGCAGTATATGT+AGG	-	chr4.2:35476616-35476635	MS.gene062970:CDS	35.0%
	TATACTGCAAGATATCCCTT+TGG	+	chr4.2:35476613-35476632	None:intergenic	35.0%
	TTCAACAAGTCTTGAAACGA+TGG	+	chr4.2:35476688-35476707	None:intergenic	35.0%
!	GGTTGGTTCAAGTATGATAT+TGG	+	chr4.2:35476667-35476686	None:intergenic	35.0%
	AAAAGATGTGTACGTGCCAA+AGG	-	chr4.2:35476594-35476613	MS.gene062970:CDS	40.0%
	AAAGATGTGTACGTGCCAAA+GGG	-	chr4.2:35476595-35476614	MS.gene062970:CDS	40.0%
	ACAAGTCTTGAAACGATGGT+TGG	+	chr4.2:35476684-35476703	None:intergenic	40.0%
	GATGTCTTTCTGATGATACC+AGG	+	chr4.2:35476568-35476587	None:intergenic	40.0%
	TCTTGCAGTATATGTAGGAG+AGG	-	chr4.2:35476621-35476640	MS.gene062970:CDS	40.0%
	TTCGAATATGATCATCCAGC+GGG	-	chr4.2:35476724-35476743	MS.gene062970:CDS	40.0%
	ATTCGAATTGTTCCTCGGCT+TGG	+	chr4.2:35476711-35476730	None:intergenic	45.0%
	GAATATGATCATCCAGCGGG+TGG	-	chr4.2:35476727-35476746	MS.gene062970:CDS	50.0%
!!	AGACTTGTTGAACCAAGCCG+AGG	-	chr4.2:35476696-35476715	MS.gene062970:CDS	50.0%
	GGAATAGTGAGACCACCCGC+TGG	+	chr4.2:35476742-35476761	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.2	gene	35476550	35476813	35476550	ID=MS.gene062970
chr4.2	mRNA	35476550	35476813	35476550	ID=MS.gene062970.t1;Parent=MS.gene062970
chr4.2	exon	35476550	35476813	35476550	ID=MS.gene062970.t1.exon1;Parent=MS.gene062970.t1
chr4.2	CDS	35476550	35476813	35476550	ID=cds.MS.gene062970.t1;Parent=MS.gene062970.t1

Gene Sequence	>MS.gene062970 ATGGGTTTTCGTTTACCTGGTATCATCAGAAAGACATCATCTTCAAAAGATGTGTACGTGCCAAAGGGATATCTTGCAGTATATGTAGGAGAGGAAATGAAACGATTTGTGATCCCAATATCATACTTGAACCAACCATCGTTTCAAGACTTGTTGAACCAAGCCGAGGAACAATTCGAATATGATCATCCAGCGGGTGGTCTCACTATTCCTTGTAGAGAAGATGTTTTCTTAGATATCACTTCTCGTTTGAGTAGGTGCTAA
Protein sequence	>MS.gene062970.t1 MGFRLPGIIRKTSSSKDVYVPKGYLAVYVGEEMKRFVIPISYLNQPSFQDLLNQAEEQFEYDHPAGGLTIPCREDVFLDITSRLSRC