AlfalfaGEDB | MS.gene062972

M. sativa cultivar XinJiangDaYe / MS.gene062972

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062972.t1	XP_003607123.1	94.6	92	5	0	1	92	1	92	1.20E-41	178.7

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062972.t1	P33083	72.2	90	25	0	1	90	1	90	2.0e-32	139.4

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062972.t1	G7JL45	94.6	92	5	0	1	92	1	92	8.8e-42	178.7

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene062972	MS.gene062974	PPI
MS.gene062972	MS.gene003583	PPI
MS.gene062972	MS.gene062951	PPI
MS.gene062972	MS.gene057801	PPI
MS.gene062972	MS.gene003608	PPI
MS.gene062972	MS.gene77527	PPI
MS.gene062972	MS.gene003591	PPI
MS.gene062972	MS.gene79891	PPI
MS.gene062972	MS.gene057795	PPI
MS.gene062972	MS.gene045367	PPI
MS.gene062972	MS.gene045364	PPI
MS.gene062972	MS.gene045363	PPI
MS.gene062972	MS.gene75675	PPI
MS.gene062972	MS.gene062973	PPI
MS.gene062972	MS.gene50652	PPI
MS.gene062972	MS.gene68761	PPI
MS.gene062972	MS.gene002380	PPI
MS.gene062972	MS.gene77529	PPI
MS.gene062972	MS.gene68165	PPI
MS.gene062972	MS.gene77526	PPI
MS.gene062972	MS.gene77523	PPI
MS.gene062972	MS.gene045366	PPI
MS.gene062972	MS.gene045365	PPI
MS.gene062972	MS.gene045362	PPI
MS.gene062972	MS.gene23372	PPI
MS.gene062972	MS.gene057790	PPI
MS.gene062972	MS.gene75315	PPI
MS.gene062972	MS.gene062952	PPI
MS.gene062972	MS.gene68164	PPI
MS.gene062972	MS.gene062979	PPI
MS.gene062972	MS.gene003624	PPI
MS.gene062972	MS.gene68759	PPI
MS.gene062972	MS.gene003586	PPI
MS.gene062972	MS.gene003627	PPI
MS.gene062972	MS.gene031200	PPI
MS.gene062972	MS.gene75676	PPI
MS.gene062972	MS.gene40326	PPI
MS.gene062972	MS.gene003590	PPI
MS.gene062972	MS.gene50687	PPI
MS.gene062972	MS.gene50665	PPI
MS.gene062972	MS.gene014223	PPI
MS.gene062972	MS.gene003625	PPI
MS.gene062972	MS.gene50766	PPI
MS.gene062972	MS.gene003587	PPI
MS.gene062972	MS.gene014669	PPI
MS.gene062972	MS.gene057808	PPI
MS.gene062972	MS.gene047517	PPI
MS.gene062972	MS.gene01358	PPI
MS.gene062972	MS.gene062963	PPI
MS.gene062972	MS.gene063112	PPI
MS.gene062972	MS.gene003602	PPI
MS.gene062972	MS.gene68163	PPI
MS.gene062972	MS.gene057818	PPI
MS.gene062972	MS.gene79889	PPI
MS.gene062972	MS.gene045368	PPI
MS.gene062972	MS.gene23370	PPI
MS.gene062972	MS.gene40327	PPI
MS.gene062972	MS.gene045360	PPI
MS.gene062972	MS.gene014222	PPI
MS.gene062972	MS.gene79888	PPI
MS.gene062972	MS.gene50659	PPI
MS.gene062972	MS.gene75678	PPI
MS.gene062972	MS.gene75314	PPI
MS.gene062972	MS.gene01764	PPI
MS.gene062972	MS.gene031199	PPI
MS.gene062972	MS.gene75673	PPI
MS.gene062972	MS.gene79885	PPI
MS.gene062972	MS.gene057778	PPI
MS.gene062972	MS.gene031198	PPI
MS.gene062972	MS.gene50676	PPI
MS.gene062972	MS.gene50764	PPI
MS.gene062972	MS.gene003577	PPI
MS.gene062972	MS.gene003594	PPI
MS.gene062972	MS.gene75672	PPI
MS.gene062972	MS.gene75674	PPI
MS.gene062972	MS.gene062984	PPI
MS.gene062972	MS.gene50654	PPI
MS.gene062972	MS.gene50675	PPI
MS.gene062972	MS.gene031201	PPI
MS.gene062972	MS.gene014670	PPI
MS.gene062972	MS.gene062943	PPI
MS.gene062972	MS.gene77524	PPI
MS.gene062972	MS.gene68162	PPI
MS.gene062972	MS.gene045361	PPI
MS.gene062972	MS.gene79887	PPI
MS.gene062972	MS.gene75679	PPI
MS.gene062972	MS.gene40325	PPI
MS.gene062972	MS.gene75677	PPI
MS.gene062972	MS.gene50763	PPI
MS.gene062972	MS.gene50677	PPI
MS.gene062972	MS.gene79890	PPI
MS.gene062972	MS.gene68760	PPI
MS.gene062972	MS.gene50684	PPI
MS.gene062972	MS.gene057797	PPI
MS.gene062972	MS.gene003614	PPI
MS.gene062972	MS.gene014668	PPI
MS.gene062972	MS.gene77528	PPI
MS.gene062972	MS.gene75316	PPI
MS.gene062972	MS.gene79886	PPI
MS.gene062972	MS.gene014671	PPI
MS.gene062972	MS.gene50765	PPI
MS.gene062972	MS.gene003596	PPI
MS.gene062972	MS.gene014667	PPI
MS.gene062972	MS.gene003615	PPI
MS.gene062972	MS.gene062988	PPI
MS.gene062972	MS.gene23371	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062972.t1	MTR_4g072500	94.565	92	5	0	1	92	1	92	9.61e-62	182
MS.gene062972.t1	MTR_4g072530	94.444	90	5	0	1	90	1	90	1.91e-60	179
MS.gene062972.t1	MTR_4g072640	89.011	91	10	0	1	91	1	91	2.42e-57	171
MS.gene062972.t1	MTR_4g072570	80.435	92	18	0	1	92	1	92	8.60e-51	155
MS.gene062972.t1	MTR_4g072310	75.269	93	22	1	1	92	1	93	5.73e-50	152
MS.gene062972.t1	MTR_4g072230	77.419	93	18	2	1	92	1	91	2.10e-49	151
MS.gene062972.t1	MTR_4g072480	78.261	92	20	0	1	92	1	92	6.86e-49	150
MS.gene062972.t1	MTR_4g072680	78.261	92	20	0	1	92	1	92	1.08e-48	149
MS.gene062972.t1	MTR_3g084150	73.913	92	24	0	1	92	1	92	1.82e-48	149
MS.gene062972.t1	MTR_4g072880	70.968	93	26	1	1	92	1	93	3.59e-48	148
MS.gene062972.t1	MTR_4g072730	76.667	90	21	0	1	90	1	90	5.00e-48	147
MS.gene062972.t1	MTR_4g072620	76.087	92	22	0	1	92	1	92	8.28e-48	147
MS.gene062972.t1	MTR_3g084180	72.826	92	25	0	1	92	1	92	2.01e-47	146
MS.gene062972.t1	MTR_8g461410	71.739	92	26	0	1	92	1	92	4.20e-47	145
MS.gene062972.t1	MTR_4g072460	76.087	92	22	0	1	92	1	92	5.97e-47	145
MS.gene062972.t1	MTR_4g072250	73.118	93	23	2	1	92	1	92	7.68e-47	145
MS.gene062972.t1	MTR_4g072860	74.194	93	23	1	1	92	1	93	8.01e-47	145
MS.gene062972.t1	MTR_4g072240	70.330	91	26	1	1	90	1	91	8.79e-47	144
MS.gene062972.t1	MTR_4g072220	70.968	93	26	1	1	92	1	93	1.71e-46	144
MS.gene062972.t1	MTR_4g072270	70.968	93	26	1	1	92	1	93	2.74e-46	143
MS.gene062972.t1	MTR_3g117630	74.713	87	22	0	6	92	6	92	6.39e-46	142
MS.gene062972.t1	MTR_3g084250	71.739	92	26	0	1	92	1	92	3.03e-45	140
MS.gene062972.t1	MTR_4g072870	69.231	91	27	1	1	90	1	91	5.04e-45	140
MS.gene062972.t1	MTR_4g050700	70.968	93	26	1	1	92	1	93	7.12e-45	140
MS.gene062972.t1	MTR_2g012410	70.968	93	26	1	1	92	1	93	7.12e-45	140
MS.gene062972.t1	MTR_4g072300	68.132	91	28	1	1	90	1	91	7.57e-45	139
MS.gene062972.t1	MTR_3g084240	73.118	93	23	2	1	92	1	92	2.05e-44	139
MS.gene062972.t1	MTR_3g084170	73.118	93	23	2	1	92	1	92	8.34e-44	137
MS.gene062972.t1	MTR_3g110042	71.910	89	25	0	1	89	1	89	1.37e-43	137
MS.gene062972.t1	MTR_3g110038	72.043	93	24	2	1	92	1	92	1.78e-43	136
MS.gene062972.t1	MTR_4g072260	66.667	93	30	1	1	92	1	93	2.18e-43	136
MS.gene062972.t1	MTR_4g072330	72.527	91	21	2	1	90	1	88	5.30e-43	135
MS.gene062972.t1	MTR_4g072850	72.340	94	24	1	1	92	1	94	8.39e-43	134
MS.gene062972.t1	MTR_4g072890	68.132	91	28	1	1	90	1	91	8.85e-43	134
MS.gene062972.t1	MTR_3g110032	68.817	93	28	1	1	92	1	93	8.99e-43	134
MS.gene062972.t1	MTR_4g072370	72.527	91	21	2	1	90	1	88	1.33e-42	134
MS.gene062972.t1	MTR_3g084220	72.043	93	24	2	1	92	1	92	7.57e-42	132
MS.gene062972.t1	MTR_4g072660	70.652	92	22	1	1	92	1	87	9.80e-42	132
MS.gene062972.t1	MTR_3g084190	69.565	92	28	0	1	92	1	92	2.64e-41	130
MS.gene062972.t1	MTR_8g461420	69.565	92	28	0	1	92	1	92	6.87e-41	130
MS.gene062972.t1	MTR_3g084260	68.132	91	28	1	1	90	1	91	1.05e-40	129
MS.gene062972.t1	MTR_3g084160	67.391	92	30	0	1	92	1	92	2.59e-40	128
MS.gene062972.t1	MTR_3g084210	70.652	92	27	0	1	92	1	92	3.02e-40	128
MS.gene062972.t1	MTR_4g072830	72.222	90	21	2	1	89	1	87	4.09e-40	127
MS.gene062972.t1	MTR_4g072940	77.778	72	16	0	21	92	53	124	8.96e-40	128
MS.gene062972.t1	MTR_3g084230	68.478	92	29	0	1	92	1	92	1.28e-39	126
MS.gene062972.t1	MTR_5g008360	75.949	79	19	0	14	92	5	83	1.58e-39	126
MS.gene062972.t1	MTR_4g072820	68.889	90	23	2	1	90	1	85	2.74e-39	125
MS.gene062972.t1	MTR_4g072740	68.132	91	22	2	1	90	1	85	3.82e-39	125
MS.gene062972.t1	MTR_4g072470	69.231	91	21	2	1	90	1	85	4.40e-39	125
MS.gene062972.t1	MTR_4g072580	67.033	91	23	2	1	90	1	85	6.77e-39	124
MS.gene062972.t1	MTR_5g008370	80.822	73	14	0	18	90	18	90	9.27e-39	126
MS.gene062972.t1	MTR_3g110045	71.111	90	26	0	3	92	62	151	1.29e-38	126
MS.gene062972.t1	MTR_4g072490	64.835	91	25	2	1	90	1	85	3.78e-38	122
MS.gene062972.t1	MTR_4g072550	79.167	72	15	0	21	92	32	103	8.62e-38	122
MS.gene062972.t1	MTR_4g072610	65.556	90	25	1	1	90	1	84	3.38e-37	120
MS.gene062972.t1	MTR_4g072630	64.444	90	28	1	1	90	1	86	3.64e-37	120
MS.gene062972.t1	MTR_4g072540	64.444	90	28	1	1	90	1	86	3.64e-37	120
MS.gene062972.t1	MTR_4g072600	65.934	91	24	2	1	90	1	85	5.57e-37	120
MS.gene062972.t1	MTR_4g072650	65.556	90	25	1	1	90	1	84	1.34e-36	119
MS.gene062972.t1	MTR_4g072670	64.444	90	28	1	1	90	1	86	3.85e-36	117
MS.gene062972.t1	MTR_4g072720	63.333	90	29	1	1	90	1	86	1.23e-35	116
MS.gene062972.t1	MTR_4g072465	60.000	90	32	1	1	90	1	86	1.19e-34	114
MS.gene062972.t1	MTR_4g072750	74.324	74	17	1	1	72	1	74	1.40e-34	114
MS.gene062972.t1	MTR_4g072590	64.444	90	27	1	1	90	1	85	3.70e-34	112
MS.gene062972.t1	MTR_4g072510	61.111	90	31	1	1	90	1	86	4.02e-34	112
MS.gene062972.t1	MTR_4g072290	61.290	93	21	2	1	92	1	79	3.93e-33	110
MS.gene062972.t1	MTR_4g072690	63.333	90	28	1	1	90	1	85	5.31e-33	109
MS.gene062972.t1	MTR_4g072450	63.333	90	28	1	1	90	1	85	5.80e-33	109
MS.gene062972.t1	MTR_4g072910	64.865	74	26	0	17	90	27	100	8.52e-33	109
MS.gene062972.t1	MTR_4g072380	62.637	91	28	3	1	90	1	86	1.56e-32	108
MS.gene062972.t1	MTR_4g072560	54.639	97	36	2	1	89	1	97	2.65e-32	108
MS.gene062972.t1	MTR_4g072770	58.242	91	28	1	1	91	1	81	1.44e-31	106
MS.gene062972.t1	MTR_4g072980	56.522	92	37	2	1	89	1	92	1.14e-30	104
MS.gene062972.t1	MTR_4g072280	64.000	75	26	1	1	74	1	75	4.17e-30	102
MS.gene062972.t1	MTR_5g008350	61.250	80	24	2	1	79	1	74	5.57e-30	102
MS.gene062972.t1	MTR_3g117640	71.642	67	18	1	25	90	34	100	1.57e-29	101
MS.gene062972.t1	MTR_3g084200	67.123	73	22	2	1	72	1	72	1.59e-29	101
MS.gene062972.t1	MTR_3g113310	65.152	66	22	1	24	89	41	105	6.71e-28	97.4
MS.gene062972.t1	MTR_6g077850	56.522	69	30	0	22	90	31	99	2.35e-27	95.9
MS.gene062972.t1	MTR_3g110035	65.152	66	23	0	27	92	73	138	4.90e-27	96.3
MS.gene062972.t1	MTR_3g117610	67.188	64	20	1	24	87	44	106	2.78e-26	93.6
MS.gene062972.t1	MTR_4g072190	65.152	66	22	1	24	89	35	99	1.03e-25	92.0
MS.gene062972.t1	MTR_4g072930	59.420	69	24	1	26	90	42	110	1.88e-23	86.7
MS.gene062972.t1	MTR_5g021820	48.837	86	40	2	7	89	19	103	8.59e-23	84.7
MS.gene062972.t1	MTR_8g076040	60.938	64	24	1	24	87	40	102	9.52e-23	84.3
MS.gene062972.t1	MTR_8g461400	51.613	93	17	3	1	92	1	66	2.08e-22	82.4
MS.gene062972.t1	MTR_4g124750	44.318	88	42	3	4	87	46	130	1.31e-18	75.5
MS.gene062972.t1	MTR_2g043960	47.887	71	36	1	15	85	66	135	1.71e-18	75.1
MS.gene062972.t1	MTR_1g024085	52.941	68	31	1	16	83	28	94	3.71e-18	73.9
MS.gene062972.t1	MTR_7g118010	51.471	68	30	2	25	90	23	89	4.80e-18	72.4
MS.gene062972.t1	MTR_4g072840	44.444	90	20	2	1	90	1	60	5.05e-18	71.2
MS.gene062972.t1	MTR_4g005310	51.515	66	31	1	21	85	58	123	2.78e-17	72.0
MS.gene062972.t1	MTR_4g025830	46.479	71	34	2	22	89	76	145	3.84e-17	71.6
MS.gene062972.t1	MTR_4g072160	52.174	69	32	1	17	85	29	96	4.91e-17	70.9
MS.gene062972.t1	MTR_0388s0020	40.909	88	47	3	5	89	56	141	2.01e-16	69.7
MS.gene062972.t1	MTR_3g092220	49.231	65	30	2	21	83	29	92	2.15e-16	68.6
MS.gene062972.t1	MTR_8g026730	48.529	68	32	2	25	90	27	93	2.72e-16	68.2
MS.gene062972.t1	MTR_1g094750	41.860	86	45	2	10	91	31	115	3.60e-16	68.2
MS.gene062972.t1	MTR_1g061570	49.206	63	31	1	23	85	17	78	3.96e-16	68.2
MS.gene062972.t1	MTR_8g461210	42.683	82	46	1	4	85	14	94	4.54e-16	67.8
MS.gene062972.t1	MTR_1g009150	47.887	71	36	1	15	85	61	130	6.59e-16	68.9
MS.gene062972.t1	MTR_1g063950	50.000	60	29	1	23	82	46	104	1.51e-15	66.6
MS.gene062972.t1	MTR_7g101740	50.000	64	31	1	24	87	39	101	2.25e-15	65.9
MS.gene062972.t1	MTR_1g059770	40.000	70	41	1	20	89	44	112	2.18e-14	63.9
MS.gene062972.t1	MTR_4g005320	49.180	61	30	1	25	85	70	129	3.30e-14	64.3
MS.gene062972.t1	MTR_3g109160	44.156	77	42	1	9	85	53	128	5.69e-14	63.5
MS.gene062972.t1	MTR_3g097120	41.772	79	37	2	21	91	5	82	6.79e-14	62.0
MS.gene062972.t1	MTR_2g066830	39.130	92	43	3	2	90	41	122	5.34e-13	60.5
MS.gene062972.t1	MTR_8g101520	39.773	88	48	3	8	91	29	115	5.78e-13	60.8
MS.gene062972.t1	MTR_7g104940	41.935	62	35	1	28	89	53	113	1.20e-12	59.3
MS.gene062972.t1	MTR_7g405740	45.902	61	32	1	25	85	67	126	1.25e-12	60.1
MS.gene062972.t1	MTR_8g096470	45.000	60	32	1	26	85	47	105	2.07e-12	58.2
MS.gene062972.t1	MTR_3g098970	34.091	88	56	2	5	92	34	119	3.73e-12	58.5
MS.gene062972.t1	MTR_7g104950	38.710	62	37	1	28	89	53	113	1.29e-11	56.6
MS.gene062972.t1	MTR_8g094980	38.272	81	36	2	24	91	2	81	1.52e-11	55.8
MS.gene062972.t1	MTR_3g105900	64.865	37	13	0	23	59	1170	1206	2.60e-11	58.5
MS.gene062972.t1	MTR_8g096500	44.828	58	31	1	25	82	49	105	6.79e-11	55.5
MS.gene062972.t1	MTR_8g096440	42.623	61	34	1	22	82	42	101	9.42e-11	54.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062972.t1	AT4G38840	60.465	86	33	1	6	90	14	99	1.35e-34	114
MS.gene062972.t1	AT4G34770	65.476	84	24	2	9	90	22	102	2.41e-32	108
MS.gene062972.t1	AT5G18020	62.667	75	27	1	16	89	15	89	3.35e-32	108
MS.gene062972.t1	AT5G18060	63.158	76	27	1	16	90	15	90	3.92e-32	107
MS.gene062972.t1	AT5G18080	69.118	68	20	1	23	89	22	89	4.37e-32	107
MS.gene062972.t1	AT4G38850	64.384	73	23	1	21	90	17	89	1.08e-31	106
MS.gene062972.t1	AT5G18050	62.821	78	26	2	13	89	14	89	1.11e-31	106
MS.gene062972.t1	AT3G03840	65.278	72	23	1	21	90	23	94	1.35e-31	106
MS.gene062972.t1	AT5G18030	65.714	70	23	1	22	90	19	88	1.49e-31	106
MS.gene062972.t1	AT2G21200	67.143	70	22	1	21	89	17	86	3.98e-31	105
MS.gene062972.t1	AT2G21210	64.706	68	22	1	25	90	28	95	2.63e-30	103
MS.gene062972.t1	AT5G18010	54.945	91	39	2	1	90	1	90	3.28e-30	102
MS.gene062972.t1	AT4G38825	61.333	75	28	1	17	90	15	89	3.71e-30	102
MS.gene062972.t1	AT3G03850	67.606	71	21	1	22	90	22	92	6.88e-30	102
MS.gene062972.t1	AT3G03820	63.014	73	24	1	21	90	23	95	9.44e-30	102
MS.gene062972.t1	AT2G21210	64.706	68	22	1	25	90	95	162	1.28e-29	103
MS.gene062972.t1	AT4G34800	56.471	85	30	2	1	82	1	81	3.45e-28	98.2
MS.gene062972.t1	AT3G03830	53.409	88	34	2	10	90	5	92	6.44e-28	97.4
MS.gene062972.t1	AT4G34810	68.571	70	17	2	25	89	48	117	8.17e-28	97.8
MS.gene062972.t1	AT4G13790	53.488	86	32	3	6	89	12	91	1.18e-26	94.0
MS.gene062972.t1	AT4G34780	65.714	70	21	1	25	91	28	97	3.48e-26	93.2
MS.gene062972.t1	AT4G34790	66.154	65	20	1	25	87	39	103	1.90e-25	91.7
MS.gene062972.t1	AT1G75580	67.692	65	20	1	25	89	44	107	3.50e-25	90.9
MS.gene062972.t1	AT4G34760	63.636	66	23	1	24	89	42	106	4.33e-25	90.5
MS.gene062972.t1	AT4G38860	59.701	67	27	0	24	90	39	105	9.53e-24	87.0
MS.gene062972.t1	AT2G21220	59.091	66	26	1	24	89	39	103	3.44e-23	85.5
MS.gene062972.t1	AT2G16580	60.938	64	24	1	24	87	43	105	1.08e-21	82.0
MS.gene062972.t1	AT1G19830	62.687	67	23	2	24	89	47	112	2.47e-21	81.3
MS.gene062972.t1	AT2G18010	57.812	64	26	1	24	87	47	109	2.18e-20	79.0
MS.gene062972.t1	AT4G36110	57.812	64	26	1	24	87	39	101	2.43e-20	78.6
MS.gene062972.t1	AT3G43120	47.222	72	37	1	14	85	68	138	5.18e-19	76.6
MS.gene062972.t1	AT5G66260	53.030	66	30	1	25	90	34	98	8.69e-19	74.3
MS.gene062972.t1	AT3G20220	46.667	75	38	2	15	88	37	110	5.38e-18	72.8
MS.gene062972.t1	AT5G20810	53.226	62	28	1	24	85	78	138	1.30e-17	73.2
MS.gene062972.t1	AT4G34750	49.231	65	32	1	23	87	35	98	2.42e-17	72.0
MS.gene062972.t1	AT4G34750	49.231	65	32	1	23	87	35	98	2.42e-17	72.0
MS.gene062972.t1	AT5G20810	53.226	62	28	1	24	85	78	138	3.11e-17	72.8
MS.gene062972.t1	AT1G75590	47.945	73	37	1	11	83	28	99	3.57e-17	71.6
MS.gene062972.t1	AT3G60690	48.611	72	33	2	21	89	84	154	5.94e-17	71.6
MS.gene062972.t1	AT5G10990	47.297	74	37	2	10	83	27	98	7.18e-17	70.9
MS.gene062972.t1	AT2G45210	45.833	72	35	2	21	89	75	145	1.22e-16	70.5
MS.gene062972.t1	AT3G61900	47.143	70	33	2	24	90	29	97	1.45e-16	69.7
MS.gene062972.t1	AT1G19840	55.738	61	26	1	23	83	39	98	1.85e-16	69.7
MS.gene062972.t1	AT2G46690	41.558	77	41	2	17	90	16	91	2.76e-16	68.6
MS.gene062972.t1	AT3G51200	51.667	60	27	2	24	82	38	96	2.63e-15	65.9
MS.gene062972.t1	AT5G53590	46.575	73	33	2	24	91	45	116	3.32e-15	66.2
MS.gene062972.t1	AT4G00880	47.826	69	33	2	24	90	27	94	5.49e-15	65.1
MS.gene062972.t1	AT4G31320	46.753	77	34	2	9	85	70	139	9.72e-15	66.2
MS.gene062972.t1	AT2G36210	42.466	73	42	0	15	87	44	116	1.65e-14	64.3
MS.gene062972.t1	AT4G12410	47.059	68	32	2	25	89	76	142	1.70e-14	64.7
MS.gene062972.t1	AT2G37030	50.847	59	28	1	24	82	48	105	2.20e-14	63.9
MS.gene062972.t1	AT4G22620	43.056	72	37	2	21	89	75	145	2.30e-14	64.7
MS.gene062972.t1	AT2G24400	44.578	83	39	2	9	91	54	129	8.07e-14	63.5
MS.gene062972.t1	AT3G12830	40.741	81	46	2	10	90	36	114	2.42e-13	61.2
MS.gene062972.t1	AT1G56150	42.667	75	42	1	16	90	29	102	7.84e-13	59.3
MS.gene062972.t1	AT3G09870	47.143	70	34	2	18	85	38	106	2.13e-12	58.5
MS.gene062972.t1	AT1G79130	41.096	73	42	1	17	89	40	111	2.33e-12	58.9
MS.gene062972.t1	AT1G76190	49.153	59	28	2	27	85	23	79	2.76e-12	58.5
MS.gene062972.t1	AT3G53250	42.373	59	30	1	24	82	51	105	4.83e-12	57.8
MS.gene062972.t1	AT3G03847	65.000	40	14	0	43	82	88	127	6.77e-12	57.4
MS.gene062972.t1	AT3G53250	42.373	59	30	1	24	82	82	136	7.50e-12	57.8
MS.gene062972.t1	AT4G09530	39.437	71	40	2	16	83	19	89	7.63e-12	56.6
MS.gene062972.t1	AT1G20470	46.154	65	33	2	21	85	19	81	1.04e-11	57.4
MS.gene062972.t1	AT1G16510	42.254	71	40	1	19	89	48	117	1.40e-11	57.0

Find 26 sgRNAs with CRISPR-Local

Find 28 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GGTTGATTTAAGTATGATAT+TGG	0.224179	4.2:+35459435	None:intergenic
CATCAAGCGGAAGAAGAATT+TGG	0.281625	4.2:-35459393	MS.gene062972:CDS
GTTGATTTAAGTATGATATT+GGG	0.370306	4.2:+35459436	None:intergenic
GTTTCCGCTTAAATGTTATT+CGG	0.401109	4.2:-35459560	MS.gene062972:CDS
AGAGAATCAGAAGCGGTTTG+TGG	0.491251	4.2:-35459460	MS.gene062972:CDS
TATTCGGAGGGCATCATTCA+CGG	0.507569	4.2:-35459544	MS.gene062972:CDS
TCAAGAATTGCTACATCAAG+CGG	0.512093	4.2:-35459406	MS.gene062972:CDS
TACACGGCAACATAGCCCTT+TGG	0.515785	4.2:+35459489	None:intergenic
GGCTATGTTGCCGTGTATGT+TGG	0.537170	4.2:-35459483	MS.gene062972:CDS
TCAAGCGAGAAGTTATATGT+TGG	0.546391	4.2:+35459319	None:intergenic
AGGAATGGTGAGGCCACCCA+TGG	0.554354	4.2:+35459359	None:intergenic
TCCGCTTAAATGTTATTCGG+AGG	0.563331	4.2:-35459557	MS.gene062972:CDS
CCGCTTAAATGTTATTCGGA+GGG	0.576931	4.2:-35459556	MS.gene062972:CDS
AAAATCAGCAGAAGTTCCAA+AGG	0.579122	4.2:-35459505	MS.gene062972:CDS
CTGATTCTCTCCAACATACA+CGG	0.585067	4.2:+35459473	None:intergenic
ATTTGGATATGATCATCCCA+TGG	0.585205	4.2:-35459376	MS.gene062972:CDS
TGTAGCAATTCTTGAAACAA+TGG	0.591172	4.2:+35459414	None:intergenic
GACATCTTCAGTGCAAGGAA+TGG	0.591180	4.2:+35459344	None:intergenic
AAATCAGCAGAAGTTCCAAA+GGG	0.597255	4.2:-35459504	MS.gene062972:CDS
TGGAAGACATCTTCAGTGCA+AGG	0.619549	4.2:+35459339	None:intergenic
TTTGGATATGATCATCCCAT+GGG	0.624132	4.2:-35459375	MS.gene062972:CDS
CCCTCCGAATAACATTTAAG+CGG	0.634114	4.2:+35459556	None:intergenic
GGAATGGTGAGGCCACCCAT+GGG	0.636587	4.2:+35459360	None:intergenic
GGATATGATCATCCCATGGG+TGG	0.642060	4.2:-35459372	MS.gene062972:CDS
CTTCAGTGCAAGGAATGGTG+AGG	0.671810	4.2:+35459349	None:intergenic
ATGTTGGAGAGAATCAGAAG+CGG	0.743921	4.2:-35459467	MS.gene062972:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	GTTGATTTAAGTATGATATT+GGG	+	chr4.2:35459439-35459458	None:intergenic	20.0%
!!	GGTTGATTTAAGTATGATAT+TGG	+	chr4.2:35459440-35459459	None:intergenic	25.0%
	GTTTCCGCTTAAATGTTATT+CGG	-	chr4.2:35459312-35459331	MS.gene062972:CDS	30.0%
	TGTAGCAATTCTTGAAACAA+TGG	+	chr4.2:35459461-35459480	None:intergenic	30.0%
	AAAATCAGCAGAAGTTCCAA+AGG	-	chr4.2:35459367-35459386	MS.gene062972:CDS	35.0%
	AAATCAGCAGAAGTTCCAAA+GGG	-	chr4.2:35459368-35459387	MS.gene062972:CDS	35.0%
	ATTTGGATATGATCATCCCA+TGG	-	chr4.2:35459496-35459515	MS.gene062972:CDS	35.0%
	TCAAGAATTGCTACATCAAG+CGG	-	chr4.2:35459466-35459485	MS.gene062972:CDS	35.0%
	TCAAGCGAGAAGTTATATGT+TGG	+	chr4.2:35459556-35459575	None:intergenic	35.0%
	TTTGGATATGATCATCCCAT+GGG	-	chr4.2:35459497-35459516	MS.gene062972:CDS	35.0%
	ATGTTGGAGAGAATCAGAAG+CGG	-	chr4.2:35459405-35459424	MS.gene062972:CDS	40.0%
	CATCAAGCGGAAGAAGAATT+TGG	-	chr4.2:35459479-35459498	MS.gene062972:CDS	40.0%
	CCCTCCGAATAACATTTAAG+CGG	+	chr4.2:35459319-35459338	None:intergenic	40.0%
	CCGCTTAAATGTTATTCGGA+GGG	-	chr4.2:35459316-35459335	MS.gene062972:CDS	40.0%
	CTGATTCTCTCCAACATACA+CGG	+	chr4.2:35459402-35459421	None:intergenic	40.0%
	TCCGCTTAAATGTTATTCGG+AGG	-	chr4.2:35459315-35459334	MS.gene062972:CDS	40.0%
!!!	TGCTGATTTTAGAGCTGCTT+GGG	+	chr4.2:35459357-35459376	None:intergenic	40.0%
	AGAGAATCAGAAGCGGTTTG+TGG	-	chr4.2:35459412-35459431	MS.gene062972:CDS	45.0%
	GACATCTTCAGTGCAAGGAA+TGG	+	chr4.2:35459531-35459550	None:intergenic	45.0%
	TGGAAGACATCTTCAGTGCA+AGG	+	chr4.2:35459536-35459555	None:intergenic	45.0%
!!	TATTCGGAGGGCATCATTCA+CGG	-	chr4.2:35459328-35459347	MS.gene062972:CDS	45.0%
!!!	CTGCTGATTTTAGAGCTGCT+TGG	+	chr4.2:35459358-35459377	None:intergenic	45.0%
	CTTCAGTGCAAGGAATGGTG+AGG	+	chr4.2:35459526-35459545	None:intergenic	50.0%
	GGATATGATCATCCCATGGG+TGG	-	chr4.2:35459500-35459519	MS.gene062972:CDS	50.0%
	GGCTATGTTGCCGTGTATGT+TGG	-	chr4.2:35459389-35459408	MS.gene062972:CDS	50.0%
	TACACGGCAACATAGCCCTT+TGG	+	chr4.2:35459386-35459405	None:intergenic	50.0%
	AGGAATGGTGAGGCCACCCA+TGG	+	chr4.2:35459516-35459535	None:intergenic	60.0%
	GGAATGGTGAGGCCACCCAT+GGG	+	chr4.2:35459515-35459534	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.2	gene	35459308	35459586	35459308	ID=MS.gene062972
chr4.2	mRNA	35459308	35459586	35459308	ID=MS.gene062972.t1;Parent=MS.gene062972
chr4.2	exon	35459308	35459586	35459308	ID=MS.gene062972.t1.exon1;Parent=MS.gene062972.t1
chr4.2	CDS	35459308	35459586	35459308	ID=cds.MS.gene062972.t1;Parent=MS.gene062972.t1

Gene Sequence	>MS.gene062972 ATGGGTTTCCGCTTAAATGTTATTCGGAGGGCATCATTCACGGCTACCCAAGCAGCTCTAAAATCAGCAGAAGTTCCAAAGGGCTATGTTGCCGTGTATGTTGGAGAGAATCAGAAGCGGTTTGTGGTCCCAATATCATACTTAAATCAACCATTGTTTCAAGAATTGCTACATCAAGCGGAAGAAGAATTTGGATATGATCATCCCATGGGTGGCCTCACCATTCCTTGCACTGAAGATGTCTTCCAACATATAACTTCTCGCTTGAATGAGCTATGA
Protein sequence	>MS.gene062972.t1 MGFRLNVIRRASFTATQAALKSAEVPKGYVAVYVGENQKRFVVPISYLNQPLFQELLHQAEEEFGYDHPMGGLTIPCTEDVFQHITSRLNEL