AlfalfaGEDB | MS.gene062980

M. sativa cultivar XinJiangDaYe / MS.gene062980

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062980.t1	RHN53459.1	93.5	92	6	0	3	94	5	96	1.80E-40	174.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062980.t1	P33083	78.3	92	18	1	1	92	1	90	4.1e-33	141.7

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062980.t1	A0A396HJG4	93.5	92	6	0	3	94	5	96	1.3e-40	174.9

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene68761	MS.gene062980	PPI
MS.gene68760	MS.gene062980	PPI
MS.gene75676	MS.gene062980	PPI
MS.gene062980	MS.gene79891	PPI
MS.gene062980	MS.gene045367	PPI
MS.gene062980	MS.gene045364	PPI
MS.gene057778	MS.gene062980	PPI
MS.gene045366	MS.gene062980	PPI
MS.gene062963	MS.gene062980	PPI
MS.gene062980	MS.gene014669	PPI
MS.gene062980	MS.gene057808	PPI
MS.gene062980	MS.gene002380	PPI
MS.gene75674	MS.gene062980	PPI
MS.gene79890	MS.gene062980	PPI
MS.gene003615	MS.gene062980	PPI
MS.gene062973	MS.gene062980	PPI
MS.gene003602	MS.gene062980	PPI
MS.gene23372	MS.gene062980	PPI
MS.gene003627	MS.gene062980	PPI
MS.gene003577	MS.gene062980	PPI
MS.gene062980	MS.gene68163	PPI
MS.gene062984	MS.gene062980	PPI
MS.gene062980	MS.gene75315	PPI
MS.gene40327	MS.gene062980	PPI
MS.gene062980	MS.gene68164	PPI
MS.gene062980	MS.gene68759	PPI
MS.gene062980	MS.gene79889	PPI
MS.gene062980	MS.gene014222	PPI
MS.gene062980	MS.gene79888	PPI
MS.gene062980	MS.gene75678	PPI
MS.gene045362	MS.gene062980	PPI
MS.gene77523	MS.gene062980	PPI
MS.gene003587	MS.gene062980	PPI
MS.gene062980	MS.gene014223	PPI
MS.gene003590	MS.gene062980	PPI
MS.gene045368	MS.gene062980	PPI
MS.gene063112	MS.gene062980	PPI
MS.gene062980	MS.gene79885	PPI
MS.gene003608	MS.gene062980	PPI
MS.gene062980	MS.gene50764	PPI
MS.gene77526	MS.gene062980	PPI
MS.gene047517	MS.gene062980	PPI
MS.gene045360	MS.gene062980	PPI
MS.gene057818	MS.gene062980	PPI
MS.gene50687	MS.gene062980	PPI
MS.gene75677	MS.gene062980	PPI
MS.gene062980	MS.gene014670	PPI
MS.gene003625	MS.gene062980	PPI
MS.gene057795	MS.gene062980	PPI
MS.gene68165	MS.gene062980	PPI
MS.gene045361	MS.gene062980	PPI
MS.gene062980	MS.gene75314	PPI
MS.gene062980	MS.gene01764	PPI
MS.gene50675	MS.gene062980	PPI
MS.gene003591	MS.gene062980	PPI
MS.gene062980	MS.gene75679	PPI
MS.gene062979	MS.gene062980	PPI
MS.gene062943	MS.gene062980	PPI
MS.gene01358	MS.gene062980	PPI
MS.gene062980	MS.gene031198	PPI
MS.gene062980	MS.gene057797	PPI
MS.gene062980	MS.gene003614	PPI
MS.gene40326	MS.gene062980	PPI
MS.gene062952	MS.gene062980	PPI
MS.gene062980	MS.gene77528	PPI
MS.gene062980	MS.gene014671	PPI
MS.gene062980	MS.gene003596	PPI
MS.gene031199	MS.gene062980	PPI
MS.gene50676	MS.gene062980	PPI
MS.gene062980	MS.gene75672	PPI
MS.gene23370	MS.gene062980	PPI
MS.gene50766	MS.gene062980	PPI
MS.gene77529	MS.gene062980	PPI
MS.gene014667	MS.gene062980	PPI
MS.gene003594	MS.gene062980	PPI
MS.gene062980	MS.gene50654	PPI
MS.gene062980	MS.gene062974	PPI
MS.gene50665	MS.gene062980	PPI
MS.gene50677	MS.gene062980	PPI
MS.gene062980	MS.gene003583	PPI
MS.gene062980	MS.gene062951	PPI
MS.gene062980	MS.gene057801	PPI
MS.gene062980	MS.gene77527	PPI
MS.gene062980	MS.gene77524	PPI
MS.gene003586	MS.gene062980	PPI
MS.gene062980	MS.gene68162	PPI
MS.gene062988	MS.gene062980	PPI
MS.gene062980	MS.gene045363	PPI
MS.gene062980	MS.gene75675	PPI
MS.gene75673	MS.gene062980	PPI
MS.gene062980	MS.gene79887	PPI
MS.gene062980	MS.gene50652	PPI
MS.gene50763	MS.gene062980	PPI
MS.gene031200	MS.gene062980	PPI
MS.gene045365	MS.gene062980	PPI
MS.gene062980	MS.gene40325	PPI
MS.gene50659	MS.gene062980	PPI
MS.gene062980	MS.gene50684	PPI
MS.gene75316	MS.gene062980	PPI
MS.gene057790	MS.gene062980	PPI
MS.gene062980	MS.gene014668	PPI
MS.gene003624	MS.gene062980	PPI
MS.gene062980	MS.gene79886	PPI
MS.gene062980	MS.gene50765	PPI
MS.gene23371	MS.gene062980	PPI
MS.gene031201	MS.gene062980	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062980.t1	MTR_4g072500	85.106	94	12	1	1	94	1	92	1.37e-55	167
MS.gene062980.t1	MTR_4g072530	83.696	92	13	1	1	92	1	90	3.40e-53	160
MS.gene062980.t1	MTR_4g072480	79.787	94	17	1	1	94	1	92	4.00e-52	158
MS.gene062980.t1	MTR_4g072640	82.609	92	14	1	1	92	1	90	8.07e-52	157
MS.gene062980.t1	MTR_4g072620	77.660	94	19	1	1	94	1	92	3.40e-51	155
MS.gene062980.t1	MTR_4g072730	77.419	93	19	1	1	93	1	91	1.03e-50	154
MS.gene062980.t1	MTR_4g072680	78.723	94	18	1	1	94	1	92	3.05e-50	153
MS.gene062980.t1	MTR_4g072570	79.787	94	17	1	1	94	1	92	4.58e-50	153
MS.gene062980.t1	MTR_4g072460	76.596	94	20	1	1	94	1	92	1.23e-48	149
MS.gene062980.t1	MTR_3g084150	77.660	94	19	1	1	94	1	92	1.77e-48	149
MS.gene062980.t1	MTR_4g072310	77.895	95	18	2	1	94	1	93	2.51e-48	149
MS.gene062980.t1	MTR_4g072270	74.737	95	21	2	1	94	1	93	4.49e-48	148
MS.gene062980.t1	MTR_8g461410	76.596	94	20	1	1	94	1	92	5.43e-48	147
MS.gene062980.t1	MTR_3g084180	76.596	94	20	1	1	94	1	92	1.79e-47	146
MS.gene062980.t1	MTR_4g072880	74.737	95	21	2	1	94	1	93	2.87e-46	143
MS.gene062980.t1	MTR_4g050700	73.684	95	22	2	1	94	1	93	3.42e-46	143
MS.gene062980.t1	MTR_2g012410	73.684	95	22	2	1	94	1	93	3.42e-46	143
MS.gene062980.t1	MTR_3g084240	75.789	95	19	2	1	94	1	92	5.50e-46	142
MS.gene062980.t1	MTR_4g072860	73.684	95	22	2	1	94	1	93	8.80e-46	142
MS.gene062980.t1	MTR_4g072240	72.043	93	23	2	1	92	1	91	1.52e-45	141
MS.gene062980.t1	MTR_5g008370	89.189	74	8	0	20	93	18	91	1.52e-45	143
MS.gene062980.t1	MTR_4g072660	71.277	94	20	1	1	94	1	87	1.73e-45	141
MS.gene062980.t1	MTR_3g084170	75.789	95	19	2	1	94	1	92	2.10e-45	141
MS.gene062980.t1	MTR_4g072230	75.789	95	18	3	1	94	1	91	2.51e-45	141
MS.gene062980.t1	MTR_4g072250	75.789	95	19	3	1	94	1	92	3.55e-45	140
MS.gene062980.t1	MTR_4g072870	72.043	93	23	2	1	92	1	91	5.06e-45	140
MS.gene062980.t1	MTR_3g110042	77.528	89	18	1	1	89	1	87	4.35e-44	138
MS.gene062980.t1	MTR_4g072220	69.474	95	26	2	1	94	1	93	1.38e-43	137
MS.gene062980.t1	MTR_3g117630	76.404	89	19	1	6	94	6	92	1.45e-43	136
MS.gene062980.t1	MTR_4g072300	68.817	93	26	2	1	92	1	91	3.69e-43	135
MS.gene062980.t1	MTR_3g084220	72.632	95	22	2	1	94	1	92	4.69e-43	135
MS.gene062980.t1	MTR_3g084250	71.277	94	25	1	1	94	1	92	7.77e-43	135
MS.gene062980.t1	MTR_4g072330	70.968	93	21	2	1	92	1	88	2.22e-42	133
MS.gene062980.t1	MTR_4g072370	72.043	93	20	2	1	92	1	88	2.34e-42	133
MS.gene062980.t1	MTR_3g110032	71.579	95	24	2	1	94	1	93	2.40e-42	133
MS.gene062980.t1	MTR_4g072850	74.468	94	24	0	1	94	1	94	3.25e-42	133
MS.gene062980.t1	MTR_5g008360	75.610	82	20	0	13	94	2	83	9.15e-42	132
MS.gene062980.t1	MTR_3g110038	70.526	95	24	2	1	94	1	92	3.27e-41	130
MS.gene062980.t1	MTR_4g072260	67.368	95	28	2	1	94	1	93	3.48e-41	130
MS.gene062980.t1	MTR_3g084210	72.340	94	24	1	1	94	1	92	4.45e-41	130
MS.gene062980.t1	MTR_4g072890	67.742	93	27	2	1	92	1	91	8.24e-41	129
MS.gene062980.t1	MTR_4g072490	68.817	93	20	2	1	92	1	85	4.13e-40	127
MS.gene062980.t1	MTR_4g072830	71.739	92	20	2	1	91	1	87	4.33e-40	127
MS.gene062980.t1	MTR_4g072740	69.892	93	19	2	1	92	1	85	4.61e-40	127
MS.gene062980.t1	MTR_3g084190	71.277	94	25	1	1	94	1	92	1.06e-39	127
MS.gene062980.t1	MTR_8g461420	72.826	92	23	1	1	92	1	90	2.07e-39	126
MS.gene062980.t1	MTR_3g084160	71.277	94	25	1	1	94	1	92	2.21e-39	126
MS.gene062980.t1	MTR_4g072820	69.565	92	21	1	1	92	1	85	2.25e-39	125
MS.gene062980.t1	MTR_4g072580	68.817	93	20	2	1	92	1	85	5.00e-39	125
MS.gene062980.t1	MTR_4g072470	69.892	93	19	2	1	92	1	85	5.38e-39	125
MS.gene062980.t1	MTR_3g084230	72.826	92	23	1	1	92	1	90	7.96e-39	124
MS.gene062980.t1	MTR_3g084260	67.368	95	28	2	1	94	1	93	9.45e-39	124
MS.gene062980.t1	MTR_4g072630	68.478	92	23	1	1	92	1	86	1.62e-38	124
MS.gene062980.t1	MTR_4g072610	69.565	92	20	1	1	92	1	84	1.91e-38	123
MS.gene062980.t1	MTR_4g072550	76.712	73	17	0	22	94	31	103	2.27e-38	124
MS.gene062980.t1	MTR_4g072600	67.742	93	21	2	1	92	1	85	2.62e-38	123
MS.gene062980.t1	MTR_4g072540	67.391	92	24	1	1	92	1	86	3.65e-38	122
MS.gene062980.t1	MTR_4g072750	79.452	73	15	0	1	73	1	73	4.33e-38	122
MS.gene062980.t1	MTR_4g072940	71.739	92	26	0	3	94	33	124	7.75e-38	123
MS.gene062980.t1	MTR_4g072590	69.565	92	21	1	1	92	1	85	1.30e-37	121
MS.gene062980.t1	MTR_4g072650	68.478	92	21	1	1	92	1	84	2.28e-37	120
MS.gene062980.t1	MTR_4g072720	66.304	92	25	1	1	92	1	86	3.54e-37	120
MS.gene062980.t1	MTR_4g072465	66.304	92	25	1	1	92	1	86	3.91e-37	120
MS.gene062980.t1	MTR_3g110045	72.826	92	23	1	3	94	62	151	9.21e-37	121
MS.gene062980.t1	MTR_4g072380	65.591	93	24	2	1	92	1	86	1.04e-36	119
MS.gene062980.t1	MTR_4g072670	65.217	92	26	1	1	92	1	86	3.66e-36	117
MS.gene062980.t1	MTR_4g072510	65.217	92	26	1	1	92	1	86	5.61e-36	117
MS.gene062980.t1	MTR_4g072980	56.842	95	40	1	1	94	1	95	6.43e-33	110
MS.gene062980.t1	MTR_4g072690	77.273	66	15	0	27	92	20	85	1.58e-32	108
MS.gene062980.t1	MTR_4g072290	62.105	95	19	3	1	94	1	79	2.23e-32	108
MS.gene062980.t1	MTR_4g072450	75.758	66	16	0	27	92	20	85	5.75e-32	107
MS.gene062980.t1	MTR_4g072910	67.568	74	24	0	19	92	27	100	6.20e-32	107
MS.gene062980.t1	MTR_4g072770	74.242	66	17	0	27	92	15	80	1.17e-31	106
MS.gene062980.t1	MTR_4g072560	54.639	97	38	2	1	91	1	97	2.74e-31	105
MS.gene062980.t1	MTR_5g008350	63.415	82	21	2	1	81	1	74	2.83e-31	105
MS.gene062980.t1	MTR_3g084200	70.667	75	18	2	1	74	1	72	7.27e-31	105
MS.gene062980.t1	MTR_3g117640	55.446	101	37	2	1	93	1	101	2.23e-29	101
MS.gene062980.t1	MTR_4g072280	62.338	77	26	2	1	76	1	75	5.78e-27	94.4
MS.gene062980.t1	MTR_3g110035	66.667	66	22	0	29	94	73	138	6.10e-27	96.3
MS.gene062980.t1	MTR_3g113310	59.091	66	26	1	26	91	41	105	1.50e-25	91.7
MS.gene062980.t1	MTR_6g077850	55.072	69	31	0	24	92	31	99	7.65e-25	89.7
MS.gene062980.t1	MTR_3g117610	60.606	66	25	1	26	91	44	108	9.59e-25	89.7
MS.gene062980.t1	MTR_4g072190	60.606	66	25	1	26	91	35	99	3.35e-24	88.2
MS.gene062980.t1	MTR_8g076040	55.714	70	30	1	22	91	36	104	8.35e-23	84.7
MS.gene062980.t1	MTR_4g072930	44.330	97	45	2	5	92	14	110	1.54e-22	84.3
MS.gene062980.t1	MTR_5g021820	56.061	66	28	1	26	91	39	103	1.02e-21	82.0
MS.gene062980.t1	MTR_8g461400	51.579	95	16	3	1	94	1	66	1.49e-21	80.5
MS.gene062980.t1	MTR_4g124750	43.182	88	49	1	4	91	46	132	2.66e-21	82.4
MS.gene062980.t1	MTR_2g043960	42.045	88	50	1	4	91	53	139	1.20e-20	80.9
MS.gene062980.t1	MTR_4g072840	48.387	93	14	3	1	92	1	60	4.48e-19	73.9
MS.gene062980.t1	MTR_1g024085	48.101	79	40	1	7	85	17	94	3.66e-18	73.9
MS.gene062980.t1	MTR_1g009150	51.471	68	32	1	20	87	64	130	7.39e-18	73.9
MS.gene062980.t1	MTR_4g005310	51.515	66	31	1	23	87	58	123	2.71e-17	72.0
MS.gene062980.t1	MTR_1g094750	45.000	80	41	2	10	87	31	109	7.61e-17	69.7
MS.gene062980.t1	MTR_7g118010	48.529	68	32	2	27	92	23	89	1.49e-16	68.9
MS.gene062980.t1	MTR_4g005320	52.459	61	28	1	27	87	70	129	2.67e-16	69.7
MS.gene062980.t1	MTR_3g109160	41.667	84	48	1	10	93	52	134	2.67e-16	69.7
MS.gene062980.t1	MTR_3g092220	45.714	70	35	2	18	85	24	92	4.54e-16	67.8
MS.gene062980.t1	MTR_1g061570	50.725	69	33	1	25	93	17	84	1.00e-15	67.4
MS.gene062980.t1	MTR_4g072160	53.968	63	26	2	26	87	36	96	1.18e-15	67.4
MS.gene062980.t1	MTR_4g025830	47.059	68	32	2	25	89	77	143	1.19e-15	68.2
MS.gene062980.t1	MTR_8g461210	41.026	78	45	1	14	91	22	98	2.20e-15	66.2
MS.gene062980.t1	MTR_8g026730	44.118	68	35	2	27	92	27	93	2.95e-15	65.5
MS.gene062980.t1	MTR_1g063950	42.105	76	43	1	15	90	36	110	5.52e-15	65.5
MS.gene062980.t1	MTR_0388s0020	39.506	81	45	2	14	91	62	141	8.38e-15	65.5
MS.gene062980.t1	MTR_1g059770	41.096	73	39	2	24	93	46	117	2.31e-14	63.9
MS.gene062980.t1	MTR_7g101740	44.000	75	41	1	15	89	28	101	4.75e-14	62.8
MS.gene062980.t1	MTR_3g098970	29.545	88	61	1	7	94	33	119	6.44e-13	60.5
MS.gene062980.t1	MTR_4g021810	51.613	62	28	2	27	87	26	86	9.16e-13	59.3
MS.gene062980.t1	MTR_3g105900	64.286	42	15	0	25	66	1170	1211	1.90e-12	61.6
MS.gene062980.t1	MTR_2g066830	35.165	91	50	2	2	92	41	122	2.10e-12	59.3
MS.gene062980.t1	MTR_7g405740	45.902	61	32	1	27	87	67	126	2.78e-12	59.3
MS.gene062980.t1	MTR_3g097120	44.595	74	32	2	22	87	4	76	2.83e-12	57.8
MS.gene062980.t1	MTR_7g104940	40.323	62	36	1	30	91	53	113	3.24e-12	58.5
MS.gene062980.t1	MTR_7g104950	35.526	76	44	2	16	91	43	113	3.72e-12	58.2
MS.gene062980.t1	MTR_8g101520	37.931	87	51	2	8	92	29	114	1.13e-11	57.8
MS.gene062980.t1	MTR_7g101890	34.884	86	50	3	4	87	32	113	1.17e-11	56.6
MS.gene062980.t1	MTR_2g095430	38.667	75	41	2	9	79	27	100	2.30e-11	56.2
MS.gene062980.t1	MTR_1g063310	38.202	89	49	4	8	92	6	92	3.01e-11	55.1
MS.gene062980.t1	MTR_8g096470	45.000	60	32	1	28	87	47	105	7.89e-11	54.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062980.t1	AT5G18020	65.753	73	24	1	18	89	15	87	2.78e-32	108
MS.gene062980.t1	AT4G34770	62.069	87	31	1	9	93	17	103	3.75e-32	108
MS.gene062980.t1	AT5G18060	64.474	76	26	1	18	92	15	90	5.22e-32	107
MS.gene062980.t1	AT4G38840	70.588	68	19	1	26	92	32	99	8.14e-32	107
MS.gene062980.t1	AT5G18080	63.158	76	27	1	18	92	15	90	9.75e-32	107
MS.gene062980.t1	AT4G38825	55.056	89	39	1	5	92	1	89	2.04e-31	106
MS.gene062980.t1	AT5G18050	61.842	76	28	1	18	92	15	90	3.22e-31	105
MS.gene062980.t1	AT5G18030	58.333	84	34	1	10	92	5	88	4.04e-31	105
MS.gene062980.t1	AT4G34800	62.821	78	26	1	10	84	4	81	6.17e-31	105
MS.gene062980.t1	AT2G21200	66.197	71	23	1	22	91	16	86	1.26e-30	103
MS.gene062980.t1	AT5G18010	60.526	76	29	1	18	92	15	90	9.09e-30	102
MS.gene062980.t1	AT2G21210	51.579	95	43	2	1	92	1	95	3.16e-29	100
MS.gene062980.t1	AT4G38850	65.714	70	21	1	23	89	17	86	3.18e-29	100
MS.gene062980.t1	AT3G03840	61.644	73	26	1	23	93	23	95	1.02e-28	99.4
MS.gene062980.t1	AT3G03820	60.811	74	26	1	23	93	23	96	1.07e-28	99.4
MS.gene062980.t1	AT2G21210	51.579	95	43	2	1	92	68	162	1.84e-28	100
MS.gene062980.t1	AT3G03850	67.647	68	20	1	28	93	26	93	8.25e-28	97.1
MS.gene062980.t1	AT4G34810	54.878	82	33	1	7	84	28	109	2.24e-27	96.7
MS.gene062980.t1	AT3G03830	61.972	71	24	1	22	89	19	89	1.02e-26	94.4
MS.gene062980.t1	AT4G13790	51.163	86	32	2	6	89	12	89	8.22e-26	92.0
MS.gene062980.t1	AT1G75580	63.077	65	23	1	27	91	44	107	9.56e-25	89.7
MS.gene062980.t1	AT4G38860	58.209	67	28	0	26	92	39	105	3.16e-24	88.6
MS.gene062980.t1	AT4G34790	61.538	65	23	1	27	89	39	103	3.55e-24	88.2
MS.gene062980.t1	AT4G34760	60.938	64	24	1	26	89	42	104	2.57e-23	86.3
MS.gene062980.t1	AT2G21220	57.576	66	27	1	26	91	39	103	6.84e-23	85.1
MS.gene062980.t1	AT4G34780	61.765	68	23	1	27	91	28	95	1.04e-22	84.7
MS.gene062980.t1	AT1G19830	61.765	68	24	2	26	92	47	113	2.35e-22	84.0
MS.gene062980.t1	AT3G43120	45.122	82	44	1	12	93	64	144	9.33e-22	83.6
MS.gene062980.t1	AT4G36110	45.783	83	44	1	7	89	20	101	2.99e-21	80.9
MS.gene062980.t1	AT5G20810	43.182	88	49	1	4	91	56	142	3.60e-21	82.4
MS.gene062980.t1	AT2G16580	57.812	64	26	1	26	89	43	105	4.86e-21	80.5
MS.gene062980.t1	AT5G20810	43.182	88	49	1	4	91	56	142	5.69e-21	82.4
MS.gene062980.t1	AT3G20220	48.649	74	36	2	15	87	35	107	2.01e-19	76.6
MS.gene062980.t1	AT5G66260	45.349	86	46	1	7	92	14	98	2.10e-19	75.9
MS.gene062980.t1	AT2G18010	50.000	72	35	1	18	89	39	109	3.74e-19	75.9
MS.gene062980.t1	AT1G75590	45.122	82	42	2	6	85	19	99	9.19e-17	70.9
MS.gene062980.t1	AT3G51200	51.562	64	29	2	22	84	34	96	3.28e-16	68.2
MS.gene062980.t1	AT2G46690	39.744	78	43	2	19	93	16	92	6.20e-16	67.8
MS.gene062980.t1	AT2G37030	49.231	65	32	1	26	90	48	111	2.07e-15	66.6
MS.gene062980.t1	AT5G10990	47.826	69	35	1	17	85	31	98	2.70e-15	66.6
MS.gene062980.t1	AT4G34750	46.154	65	34	1	25	89	35	98	2.75e-15	66.6
MS.gene062980.t1	AT4G34750	46.154	65	34	1	25	89	35	98	2.75e-15	66.6
MS.gene062980.t1	AT3G61900	44.286	70	35	2	26	92	29	97	5.09e-15	65.9
MS.gene062980.t1	AT1G19840	52.459	61	28	1	25	85	39	98	8.85e-15	65.5
MS.gene062980.t1	AT2G45210	43.662	71	36	2	22	89	74	143	8.92e-15	65.9
MS.gene062980.t1	AT4G00880	46.479	71	35	2	24	92	25	94	1.67e-14	63.9
MS.gene062980.t1	AT3G09870	50.769	65	29	2	25	87	43	106	1.70e-14	63.9
MS.gene062980.t1	AT3G60690	45.714	70	34	2	23	89	84	152	2.71e-14	64.7
MS.gene062980.t1	AT3G12830	37.975	79	48	1	14	92	37	114	4.39e-14	63.2
MS.gene062980.t1	AT4G31320	46.970	66	34	1	22	87	75	139	4.46e-14	64.3
MS.gene062980.t1	AT4G09530	42.466	73	39	2	24	93	25	97	8.10e-14	62.0
MS.gene062980.t1	AT2G24400	52.459	61	28	1	27	87	64	123	1.37e-13	63.2
MS.gene062980.t1	AT5G53590	41.667	72	36	2	26	92	45	115	1.44e-13	62.0
MS.gene062980.t1	AT1G56150	36.634	101	49	2	6	92	3	102	1.59e-13	61.2
MS.gene062980.t1	AT3G53250	43.077	65	33	1	26	90	51	111	5.06e-13	60.5
MS.gene062980.t1	AT2G36210	38.667	75	46	0	17	91	44	118	7.19e-13	60.1
MS.gene062980.t1	AT3G53250	43.077	65	33	1	26	90	82	142	9.86e-13	60.5
MS.gene062980.t1	AT4G12410	45.312	64	31	2	27	87	76	138	1.09e-12	60.1
MS.gene062980.t1	AT4G22620	41.176	68	36	2	23	87	75	141	3.23e-12	58.9
MS.gene062980.t1	AT1G76190	44.286	70	37	2	18	87	12	79	7.07e-12	57.4
MS.gene062980.t1	AT1G16510	39.437	71	42	1	21	91	48	117	7.82e-12	57.8
MS.gene062980.t1	AT1G20470	37.349	83	50	2	5	87	1	81	2.09e-11	56.6
MS.gene062980.t1	AT1G79130	38.356	73	44	1	19	91	40	111	7.62e-11	55.1

Find 26 sgRNAs with CRISPR-Local

Find 27 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GGTTTGTTCAAGTATGATAT+TGG	0.253620	4.2:+35431074	None:intergenic
CATATTACCTCTTGCTTGAA+TGG	0.296831	4.2:-35430954	MS.gene062980:CDS
GTTTGTTCAAGTATGATATT+GGG	0.356462	4.2:+35431075	None:intergenic
AGTCAAGCTGAGGAAGAGTT+TGG	0.376098	4.2:-35431032	MS.gene062980:CDS
ATATTACCTCTTGCTTGAAT+GGG	0.458776	4.2:-35430953	MS.gene062980:CDS
GTTTGGATATGATCATCCTA+TGG	0.460845	4.2:-35431015	MS.gene062980:CDS
CCCGTCGAATAACGTTTAAA+CGG	0.487929	4.2:+35431201	None:intergenic
CCGTTTAAACGTTATTCGAC+GGG	0.508828	4.2:-35431201	MS.gene062980:CDS
AATATGTTGGAAGGCATCTT+CGG	0.510466	4.2:+35430971	None:intergenic
TACACTGCAAGATATCCCTT+TGG	0.534094	4.2:+35431128	None:intergenic
CTCAACAAGTATTGAAACGA+TGG	0.539880	4.2:+35431053	None:intergenic
GGCATCTTCGGTGCAAGGAA+TGG	0.540062	4.2:+35430983	None:intergenic
GGATATCTTGCAGTGTATGT+TGG	0.542806	4.2:-35431122	MS.gene062980:CDS
TCCGTTTAAACGTTATTCGA+CGG	0.544009	4.2:-35431202	MS.gene062980:CDS
AAAATCATCAGAAGTACCAA+AGG	0.569679	4.2:-35431144	MS.gene062980:CDS
TGGAAGGCATCTTCGGTGCA+AGG	0.581063	4.2:+35430978	None:intergenic
TCAAGCAAGAGGTAATATGT+TGG	0.581622	4.2:+35430958	None:intergenic
AAATCATCAGAAGTACCAAA+GGG	0.583576	4.2:-35431143	MS.gene062980:CDS
TCATAGCCCATTCAAGCAAG+AGG	0.588293	4.2:+35430947	None:intergenic
GCAAGAGGTAATATGTTGGA+AGG	0.588982	4.2:+35430962	None:intergenic
TTTGGATATGATCATCCTAT+GGG	0.589729	4.2:-35431014	MS.gene062980:CDS
GGATATGATCATCCTATGGG+TGG	0.607666	4.2:-35431011	MS.gene062980:CDS
ATACTTGTTGAGTCAAGCTG+AGG	0.622437	4.2:-35431042	MS.gene062980:CDS
GGAATGGTGAGGCCACCCAT+AGG	0.638989	4.2:+35430999	None:intergenic
CTTCGGTGCAAGGAATGGTG+AGG	0.671810	4.2:+35430988	None:intergenic
ATGTTGGCGAGAAAATGAAG+CGG	0.743921	4.2:-35431106	MS.gene062980:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	GTTTGTTCAAGTATGATATT+GGG	+	chr4.2:35431084-35431103	None:intergenic	25.0%
	ATATTACCTCTTGCTTGAAT+GGG	-	chr4.2:35431203-35431222	MS.gene062980:CDS	30.0%
	TTTGGATATGATCATCCTAT+GGG	-	chr4.2:35431142-35431161	MS.gene062980:CDS	30.0%
!	GGTTTGTTCAAGTATGATAT+TGG	+	chr4.2:35431085-35431104	None:intergenic	30.0%
!!	AAAATCATCAGAAGTACCAA+AGG	-	chr4.2:35431012-35431031	MS.gene062980:CDS	30.0%
!!	AAATCATCAGAAGTACCAAA+GGG	-	chr4.2:35431013-35431032	MS.gene062980:CDS	30.0%
	CATATTACCTCTTGCTTGAA+TGG	-	chr4.2:35431202-35431221	MS.gene062980:CDS	35.0%
	GTTTGGATATGATCATCCTA+TGG	-	chr4.2:35431141-35431160	MS.gene062980:CDS	35.0%
	TCAAGCAAGAGGTAATATGT+TGG	+	chr4.2:35431201-35431220	None:intergenic	35.0%
	TCCGTTTAAACGTTATTCGA+CGG	-	chr4.2:35430954-35430973	MS.gene062980:CDS	35.0%
!!	AATATGTTGGAAGGCATCTT+CGG	+	chr4.2:35431188-35431207	None:intergenic	35.0%
!!	CTCAACAAGTATTGAAACGA+TGG	+	chr4.2:35431106-35431125	None:intergenic	35.0%
	ATGTTGGCGAGAAAATGAAG+CGG	-	chr4.2:35431050-35431069	MS.gene062980:CDS	40.0%
	CCCGTCGAATAACGTTTAAA+CGG	+	chr4.2:35430958-35430977	None:intergenic	40.0%
	CCGTTTAAACGTTATTCGAC+GGG	-	chr4.2:35430955-35430974	MS.gene062980:CDS	40.0%
	GCAAGAGGTAATATGTTGGA+AGG	+	chr4.2:35431197-35431216	None:intergenic	40.0%
	GGATATCTTGCAGTGTATGT+TGG	-	chr4.2:35431034-35431053	MS.gene062980:CDS	40.0%
	TACACTGCAAGATATCCCTT+TGG	+	chr4.2:35431031-35431050	None:intergenic	40.0%
!	ATACTTGTTGAGTCAAGCTG+AGG	-	chr4.2:35431114-35431133	MS.gene062980:CDS	40.0%
!!!	CTGATGATTTTGAAGCTGCT+TGG	+	chr4.2:35431003-35431022	None:intergenic	40.0%
	AGTCAAGCTGAGGAAGAGTT+TGG	-	chr4.2:35431124-35431143	MS.gene062980:CDS	45.0%
	GGATATGATCATCCTATGGG+TGG	-	chr4.2:35431145-35431164	MS.gene062980:CDS	45.0%
	TCATAGCCCATTCAAGCAAG+AGG	+	chr4.2:35431212-35431231	None:intergenic	45.0%
!	CTTCGGTGCAAGGAATGGTG+AGG	+	chr4.2:35431171-35431190	None:intergenic	55.0%
!	GGCATCTTCGGTGCAAGGAA+TGG	+	chr4.2:35431176-35431195	None:intergenic	55.0%
!!	TGGAAGGCATCTTCGGTGCA+AGG	+	chr4.2:35431181-35431200	None:intergenic	55.0%
	GGAATGGTGAGGCCACCCAT+AGG	+	chr4.2:35431160-35431179	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.2	gene	35430947	35431231	35430947	ID=MS.gene062980
chr4.2	mRNA	35430947	35431231	35430947	ID=MS.gene062980.t1;Parent=MS.gene062980
chr4.2	exon	35430947	35431231	35430947	ID=MS.gene062980.t1.exon1;Parent=MS.gene062980.t1
chr4.2	CDS	35430947	35431231	35430947	ID=cds.MS.gene062980.t1;Parent=MS.gene062980.t1

Gene Sequence	>MS.gene062980 ATGGGTTTCCGTTTAAACGTTATTCGACGGGCATCAGTAAGTGCTACTGCAAGCCAAGCAGCTTCAAAATCATCAGAAGTACCAAAGGGATATCTTGCAGTGTATGTTGGCGAGAAAATGAAGCGGTTTGTGATCCCAATATCATACTTGAACAAACCATCGTTTCAATACTTGTTGAGTCAAGCTGAGGAAGAGTTTGGATATGATCATCCTATGGGTGGCCTCACCATTCCTTGCACCGAAGATGCCTTCCAACATATTACCTCTTGCTTGAATGGGCTATGA
Protein sequence	>MS.gene062980.t1 MGFRLNVIRRASVSATASQAASKSSEVPKGYLAVYVGEKMKRFVIPISYLNKPSFQYLLSQAEEEFGYDHPMGGLTIPCTEDAFQHITSCLNGL