AlfalfaGEDB | MS.gene062985

M. sativa cultivar XinJiangDaYe / MS.gene062985

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062985.t1	AES89351.1	92.1	89	7	0	1	89	1	89	3.30E-39	170.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062985.t1	P33080	70.7	92	25	1	1	90	1	92	4.3e-32	138.3

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062985.t1	G7JMA8	92.1	89	7	0	1	89	1	89	2.3e-39	170.6

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene045360	MS.gene062985	PPI
MS.gene014669	MS.gene062985	PPI
MS.gene045367	MS.gene062985	PPI
MS.gene057818	MS.gene062985	PPI
MS.gene68162	MS.gene062985	PPI
MS.gene014223	MS.gene062985	PPI
MS.gene50687	MS.gene062985	PPI
MS.gene75677	MS.gene062985	PPI
MS.gene057795	MS.gene062985	PPI
MS.gene68165	MS.gene062985	PPI
MS.gene01764	MS.gene062985	PPI
MS.gene002380	MS.gene062985	PPI
MS.gene045361	MS.gene062985	PPI
MS.gene50675	MS.gene062985	PPI
MS.gene003591	MS.gene062985	PPI
MS.gene50684	MS.gene062985	PPI
MS.gene062979	MS.gene062985	PPI
MS.gene40325	MS.gene062985	PPI
MS.gene062943	MS.gene062985	PPI
MS.gene75679	MS.gene062985	PPI
MS.gene01358	MS.gene062985	PPI
MS.gene014668	MS.gene062985	PPI
MS.gene003608	MS.gene062985	PPI
MS.gene75675	MS.gene062985	PPI
MS.gene003583	MS.gene062985	PPI
MS.gene79888	MS.gene062985	PPI
MS.gene40326	MS.gene062985	PPI
MS.gene062952	MS.gene062985	PPI
MS.gene77527	MS.gene062985	PPI
MS.gene50654	MS.gene062985	PPI
MS.gene50676	MS.gene062985	PPI
MS.gene003614	MS.gene062985	PPI
MS.gene057797	MS.gene062985	PPI
MS.gene50652	MS.gene062985	PPI
MS.gene23370	MS.gene062985	PPI
MS.gene50766	MS.gene062985	PPI
MS.gene003594	MS.gene062985	PPI
MS.gene003596	MS.gene062985	PPI
MS.gene50665	MS.gene062985	PPI
MS.gene79889	MS.gene062985	PPI
MS.gene50677	MS.gene062985	PPI
MS.gene014671	MS.gene062985	PPI
MS.gene003625	MS.gene062985	PPI
MS.gene68759	MS.gene062985	PPI
MS.gene003586	MS.gene062985	PPI
MS.gene062988	MS.gene062985	PPI
MS.gene50764	MS.gene062985	PPI
MS.gene50763	MS.gene062985	PPI
MS.gene014670	MS.gene062985	PPI
MS.gene75315	MS.gene062985	PPI
MS.gene031200	MS.gene062985	PPI
MS.gene045365	MS.gene062985	PPI
MS.gene79885	MS.gene062985	PPI
MS.gene50659	MS.gene062985	PPI
MS.gene75316	MS.gene062985	PPI
MS.gene68163	MS.gene062985	PPI
MS.gene057790	MS.gene062985	PPI
MS.gene062974	MS.gene062985	PPI
MS.gene045363	MS.gene062985	PPI
MS.gene003624	MS.gene062985	PPI
MS.gene79886	MS.gene062985	PPI
MS.gene23371	MS.gene062985	PPI
MS.gene031199	MS.gene062985	PPI
MS.gene75314	MS.gene062985	PPI
MS.gene057808	MS.gene062985	PPI
MS.gene77529	MS.gene062985	PPI
MS.gene68761	MS.gene062985	PPI
MS.gene014667	MS.gene062985	PPI
MS.gene68760	MS.gene062985	PPI
MS.gene75676	MS.gene062985	PPI
MS.gene062951	MS.gene062985	PPI
MS.gene057778	MS.gene062985	PPI
MS.gene75673	MS.gene062985	PPI
MS.gene045366	MS.gene062985	PPI
MS.gene062963	MS.gene062985	PPI
MS.gene77528	MS.gene062985	PPI
MS.gene68164	MS.gene062985	PPI
MS.gene031198	MS.gene062985	PPI
MS.gene75674	MS.gene062985	PPI
MS.gene79890	MS.gene062985	PPI
MS.gene50765	MS.gene062985	PPI
MS.gene003615	MS.gene062985	PPI
MS.gene045364	MS.gene062985	PPI
MS.gene003602	MS.gene062985	PPI
MS.gene23372	MS.gene062985	PPI
MS.gene003627	MS.gene062985	PPI
MS.gene003577	MS.gene062985	PPI
MS.gene77524	MS.gene062985	PPI
MS.gene062984	MS.gene062985	PPI
MS.gene057801	MS.gene062985	PPI
MS.gene014222	MS.gene062985	PPI
MS.gene40327	MS.gene062985	PPI
MS.gene031201	MS.gene062985	PPI
MS.gene75678	MS.gene062985	PPI
MS.gene045362	MS.gene062985	PPI
MS.gene77523	MS.gene062985	PPI
MS.gene003587	MS.gene062985	PPI
MS.gene003590	MS.gene062985	PPI
MS.gene045368	MS.gene062985	PPI
MS.gene063112	MS.gene062985	PPI
MS.gene79891	MS.gene062985	PPI
MS.gene79887	MS.gene062985	PPI
MS.gene062973	MS.gene062985	PPI
MS.gene75672	MS.gene062985	PPI
MS.gene77526	MS.gene062985	PPI
MS.gene047517	MS.gene062985	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062985.t1	MTR_4g072830	91.111	90	8	0	1	90	1	90	2.36e-57	171
MS.gene062985.t1	MTR_4g072370	87.500	88	11	0	1	88	1	88	5.95e-53	160
MS.gene062985.t1	MTR_4g072330	84.091	88	14	0	1	88	1	88	3.60e-52	158
MS.gene062985.t1	MTR_4g072580	87.640	89	8	1	1	89	1	86	9.13e-52	157
MS.gene062985.t1	MTR_4g072740	84.091	88	11	1	1	88	1	85	1.85e-49	151
MS.gene062985.t1	MTR_4g072490	80.682	88	14	1	1	88	1	85	4.76e-48	147
MS.gene062985.t1	MTR_4g072600	82.022	89	13	1	1	89	1	86	1.82e-47	146
MS.gene062985.t1	MTR_4g072470	82.955	88	12	1	1	88	1	85	2.78e-47	145
MS.gene062985.t1	MTR_4g072630	78.409	88	17	1	1	88	1	86	9.28e-47	144
MS.gene062985.t1	MTR_4g072540	79.545	88	16	1	1	88	1	86	4.42e-45	140
MS.gene062985.t1	MTR_3g084150	71.739	92	24	1	1	90	1	92	1.08e-44	139
MS.gene062985.t1	MTR_4g072670	80.682	88	15	1	1	88	1	86	1.53e-44	139
MS.gene062985.t1	MTR_4g072870	71.429	91	23	1	1	88	1	91	3.50e-44	138
MS.gene062985.t1	MTR_3g084180	70.652	92	25	1	1	90	1	92	5.65e-44	137
MS.gene062985.t1	MTR_4g072465	75.000	88	20	1	1	88	1	86	9.24e-44	137
MS.gene062985.t1	MTR_4g072510	77.273	88	18	1	1	88	1	86	1.63e-43	136
MS.gene062985.t1	MTR_8g461410	69.565	92	26	1	1	90	1	92	3.65e-43	135
MS.gene062985.t1	MTR_5g008350	83.117	77	10	1	1	77	1	74	1.15e-42	134
MS.gene062985.t1	MTR_4g072310	70.968	93	24	1	1	90	1	93	1.28e-42	134
MS.gene062985.t1	MTR_4g072240	68.132	91	26	1	1	88	1	91	1.34e-42	134
MS.gene062985.t1	MTR_3g110038	71.739	92	24	1	1	90	1	92	1.41e-42	134
MS.gene062985.t1	MTR_3g110032	69.892	93	25	1	1	90	1	93	1.75e-42	134
MS.gene062985.t1	MTR_4g072610	73.034	89	20	1	1	89	1	85	1.79e-42	133
MS.gene062985.t1	MTR_3g084170	71.739	92	24	1	1	90	1	92	2.31e-42	133
MS.gene062985.t1	MTR_4g072880	70.330	91	24	1	1	88	1	91	2.43e-42	133
MS.gene062985.t1	MTR_4g072220	68.817	93	26	1	1	90	1	93	3.23e-42	133
MS.gene062985.t1	MTR_4g072650	76.404	89	17	2	1	89	1	85	3.53e-42	132
MS.gene062985.t1	MTR_4g072300	67.033	91	27	1	1	88	1	91	8.08e-42	132
MS.gene062985.t1	MTR_4g072720	75.000	88	20	1	1	88	1	86	1.01e-41	131
MS.gene062985.t1	MTR_3g084240	70.652	92	25	1	1	90	1	92	1.83e-41	131
MS.gene062985.t1	MTR_4g072260	66.667	93	28	1	1	90	1	93	2.60e-41	130
MS.gene062985.t1	MTR_4g072250	73.626	91	20	2	1	88	1	90	4.36e-41	130
MS.gene062985.t1	MTR_4g072230	73.118	93	20	2	1	90	1	91	5.45e-41	130
MS.gene062985.t1	MTR_4g072860	73.118	93	22	1	1	90	1	93	7.20e-41	129
MS.gene062985.t1	MTR_4g050700	68.817	93	26	1	1	90	1	93	7.69e-41	129
MS.gene062985.t1	MTR_2g012410	68.817	93	26	1	1	90	1	93	7.69e-41	129
MS.gene062985.t1	MTR_4g072890	65.934	91	28	1	1	88	1	91	3.15e-40	128
MS.gene062985.t1	MTR_4g072730	67.778	90	27	1	1	88	1	90	3.35e-40	128
MS.gene062985.t1	MTR_3g084220	68.478	92	27	1	1	90	1	92	4.32e-40	127
MS.gene062985.t1	MTR_4g072690	75.000	88	19	1	1	88	1	85	6.09e-40	127
MS.gene062985.t1	MTR_3g084260	68.132	91	26	1	1	88	1	91	6.82e-40	127
MS.gene062985.t1	MTR_4g072640	71.111	90	24	1	1	88	1	90	8.34e-40	127
MS.gene062985.t1	MTR_4g072270	66.667	93	28	1	1	90	1	93	1.02e-39	127
MS.gene062985.t1	MTR_4g072500	70.968	93	23	2	1	90	1	92	1.41e-39	126
MS.gene062985.t1	MTR_4g072820	72.727	88	19	2	1	87	1	84	1.57e-39	126
MS.gene062985.t1	MTR_3g084250	66.304	92	29	1	1	90	1	92	4.98e-39	125
MS.gene062985.t1	MTR_3g110042	71.264	87	23	1	1	85	1	87	5.04e-39	125
MS.gene062985.t1	MTR_4g072480	65.217	92	30	1	1	90	1	92	5.15e-39	125
MS.gene062985.t1	MTR_4g072620	64.130	92	31	1	1	90	1	92	5.38e-39	125
MS.gene062985.t1	MTR_4g072380	74.419	86	18	2	1	85	1	83	5.66e-39	125
MS.gene062985.t1	MTR_3g117630	67.778	90	26	1	4	90	3	92	8.07e-39	124
MS.gene062985.t1	MTR_4g072570	69.892	93	24	2	1	90	1	92	8.16e-39	124
MS.gene062985.t1	MTR_4g072450	73.864	88	20	1	1	88	1	85	1.36e-38	124
MS.gene062985.t1	MTR_4g072590	72.727	88	21	1	1	88	1	85	1.81e-38	123
MS.gene062985.t1	MTR_4g072530	69.231	91	24	2	1	88	1	90	4.40e-38	122
MS.gene062985.t1	MTR_4g072680	64.130	92	31	1	1	90	1	92	5.27e-38	122
MS.gene062985.t1	MTR_4g072850	68.085	94	26	1	1	90	1	94	5.35e-37	120
MS.gene062985.t1	MTR_4g072660	63.333	90	30	1	1	90	1	87	9.81e-37	119
MS.gene062985.t1	MTR_4g072460	61.957	92	33	1	1	90	1	92	1.17e-36	119
MS.gene062985.t1	MTR_3g084160	65.217	92	30	1	1	90	1	92	5.69e-36	117
MS.gene062985.t1	MTR_3g084190	64.130	92	31	1	1	90	1	92	1.19e-35	116
MS.gene062985.t1	MTR_3g084210	64.130	92	31	1	1	90	1	92	2.17e-35	115
MS.gene062985.t1	MTR_8g461420	64.130	92	31	1	1	90	1	92	2.64e-35	115
MS.gene062985.t1	MTR_5g008360	72.368	76	21	0	15	90	8	83	4.84e-35	114
MS.gene062985.t1	MTR_3g084230	64.130	92	31	1	1	90	1	92	7.24e-35	114
MS.gene062985.t1	MTR_5g008370	66.667	90	28	1	1	88	1	90	2.40e-34	114
MS.gene062985.t1	MTR_3g110045	73.611	72	19	0	19	90	80	151	2.42e-34	115
MS.gene062985.t1	MTR_4g072940	66.304	92	27	1	3	90	33	124	1.16e-33	112
MS.gene062985.t1	MTR_4g072560	54.082	98	33	3	1	87	1	97	5.33e-32	107
MS.gene062985.t1	MTR_4g072980	54.348	92	37	2	1	87	1	92	2.30e-31	105
MS.gene062985.t1	MTR_3g117640	51.515	99	36	2	1	87	1	99	1.43e-30	104
MS.gene062985.t1	MTR_4g072550	65.753	73	25	0	18	90	31	103	3.36e-30	103
MS.gene062985.t1	MTR_3g084200	68.056	72	21	1	1	70	1	72	4.12e-30	103
MS.gene062985.t1	MTR_4g072910	57.647	85	35	1	4	88	17	100	5.87e-30	102
MS.gene062985.t1	MTR_4g072770	71.875	64	18	0	24	87	16	79	7.33e-30	101
MS.gene062985.t1	MTR_3g110035	58.333	84	30	1	7	90	60	138	4.08e-29	101
MS.gene062985.t1	MTR_4g072750	63.514	74	23	1	1	70	1	74	1.64e-26	93.2
MS.gene062985.t1	MTR_4g072280	60.000	75	27	1	1	72	1	75	3.63e-26	92.4
MS.gene062985.t1	MTR_4g072290	55.556	90	29	2	1	90	1	79	5.72e-26	91.7
MS.gene062985.t1	MTR_6g077850	52.500	80	38	0	10	89	21	100	1.29e-24	89.0
MS.gene062985.t1	MTR_3g113310	56.716	67	28	1	21	87	40	105	4.27e-23	85.5
MS.gene062985.t1	MTR_3g117610	57.971	69	28	1	21	89	43	110	5.04e-23	85.5
MS.gene062985.t1	MTR_4g072930	51.852	81	34	2	13	88	30	110	2.49e-22	83.6
MS.gene062985.t1	MTR_4g072190	50.000	84	40	2	5	87	17	99	3.76e-22	82.8
MS.gene062985.t1	MTR_5g021820	53.030	66	30	1	22	87	39	103	5.98e-19	74.7
MS.gene062985.t1	MTR_8g076040	45.882	85	38	2	8	85	19	102	7.89e-19	74.3
MS.gene062985.t1	MTR_8g461400	47.826	92	20	2	1	90	1	66	1.41e-18	72.8
MS.gene062985.t1	MTR_4g072840	48.864	88	15	3	1	87	1	59	1.92e-17	69.7
MS.gene062985.t1	MTR_2g043960	44.444	90	38	2	2	80	44	132	3.13e-17	72.0
MS.gene062985.t1	MTR_1g094750	53.226	62	28	1	22	83	49	109	4.59e-17	70.5
MS.gene062985.t1	MTR_4g124750	54.237	59	26	1	22	80	68	125	4.02e-16	68.9
MS.gene062985.t1	MTR_4g025830	41.379	87	43	3	5	88	65	146	5.34e-16	68.6
MS.gene062985.t1	MTR_7g118010	47.059	68	33	2	24	89	24	90	2.13e-15	65.9
MS.gene062985.t1	MTR_4g005310	50.820	61	29	1	24	83	63	123	2.27e-15	67.0
MS.gene062985.t1	MTR_1g009150	55.000	60	26	1	24	83	72	130	5.28e-15	66.6
MS.gene062985.t1	MTR_7g101740	50.000	64	31	1	22	85	39	101	5.43e-15	65.1
MS.gene062985.t1	MTR_1g063950	42.857	70	39	1	14	83	39	107	5.68e-15	65.1
MS.gene062985.t1	MTR_1g061570	50.000	72	33	2	14	83	8	78	1.43e-14	64.3
MS.gene062985.t1	MTR_0388s0020	43.421	76	39	2	16	88	68	142	1.57e-14	64.7
MS.gene062985.t1	MTR_4g072160	40.698	86	50	1	4	89	18	102	3.63e-14	63.5
MS.gene062985.t1	MTR_1g024085	40.659	91	48	2	4	89	13	102	4.57e-14	63.5
MS.gene062985.t1	MTR_4g005320	50.000	60	29	1	24	83	71	129	6.42e-14	63.5
MS.gene062985.t1	MTR_3g092220	46.377	69	34	2	14	80	24	91	7.15e-14	62.0
MS.gene062985.t1	MTR_8g026730	43.836	73	36	3	19	89	25	94	9.48e-14	61.6
MS.gene062985.t1	MTR_8g461210	47.059	68	35	1	22	89	34	100	1.45e-13	61.2
MS.gene062985.t1	MTR_3g105900	64.286	42	15	0	22	63	1171	1212	2.69e-13	63.9
MS.gene062985.t1	MTR_3g109160	51.667	60	28	1	24	83	70	128	1.27e-12	60.1
MS.gene062985.t1	MTR_5g008380	84.375	32	5	0	57	88	246	277	1.60e-12	61.2
MS.gene062985.t1	MTR_8g101520	43.939	66	36	1	24	89	51	115	1.13e-11	57.4
MS.gene062985.t1	MTR_1g059770	34.568	81	45	2	14	87	33	112	4.75e-11	55.1
MS.gene062985.t1	MTR_7g405740	43.333	60	33	1	24	83	68	126	4.77e-11	55.8
MS.gene062985.t1	MTR_2g095430	39.189	74	40	2	7	76	29	101	6.81e-11	54.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062985.t1	AT5G18020	60.241	83	28	2	8	89	13	91	5.72e-33	109
MS.gene062985.t1	AT4G38840	69.118	68	20	1	22	88	32	99	3.49e-32	108
MS.gene062985.t1	AT5G18080	61.333	75	28	1	14	87	15	89	4.66e-32	107
MS.gene062985.t1	AT5G18050	58.025	81	29	2	8	87	13	89	1.41e-31	106
MS.gene062985.t1	AT5G18060	59.259	81	28	2	8	87	13	89	2.31e-31	105
MS.gene062985.t1	AT5G18030	58.025	81	27	2	8	87	13	87	8.96e-31	104
MS.gene062985.t1	AT2G21210	62.162	74	26	1	17	88	22	95	9.89e-31	104
MS.gene062985.t1	AT5G18010	58.667	75	30	1	14	87	15	89	1.66e-30	103
MS.gene062985.t1	AT4G38825	59.459	74	29	1	15	87	15	88	2.50e-30	103
MS.gene062985.t1	AT2G21200	62.500	72	26	1	17	87	15	86	3.64e-30	102
MS.gene062985.t1	AT2G21210	62.162	74	26	1	17	88	89	162	4.40e-30	104
MS.gene062985.t1	AT4G34810	69.565	69	16	2	24	87	49	117	5.96e-30	103
MS.gene062985.t1	AT4G34770	64.557	79	26	1	12	88	24	102	7.04e-29	100
MS.gene062985.t1	AT4G34800	55.814	86	33	2	1	83	1	84	7.70e-29	99.8
MS.gene062985.t1	AT3G03820	52.809	89	39	1	2	87	6	94	7.94e-28	97.1
MS.gene062985.t1	AT4G38850	61.194	67	23	1	24	87	22	88	8.03e-28	96.7
MS.gene062985.t1	AT3G03840	60.563	71	26	1	19	87	23	93	1.11e-27	96.7
MS.gene062985.t1	AT3G03850	65.152	66	21	1	24	87	26	91	9.99e-27	94.4
MS.gene062985.t1	AT4G34780	62.500	72	24	1	21	89	26	97	7.90e-26	92.4
MS.gene062985.t1	AT3G03830	61.194	67	23	1	24	87	25	91	2.30e-25	90.9
MS.gene062985.t1	AT4G13790	49.315	73	35	1	17	87	19	91	5.51e-25	89.7
MS.gene062985.t1	AT4G34790	62.500	64	22	1	24	85	40	103	2.14e-24	88.6
MS.gene062985.t1	AT4G38860	48.864	88	38	1	5	85	15	102	2.87e-23	85.9
MS.gene062985.t1	AT2G21220	46.667	90	40	2	5	87	15	103	7.90e-22	82.0
MS.gene062985.t1	AT1G75580	50.549	91	33	3	8	87	18	107	1.91e-21	81.3
MS.gene062985.t1	AT4G34760	45.652	92	40	2	5	87	16	106	5.97e-21	80.1
MS.gene062985.t1	AT4G36110	46.512	86	40	2	5	85	17	101	1.47e-18	73.9
MS.gene062985.t1	AT2G16580	44.318	88	38	2	8	85	19	105	2.04e-18	73.6
MS.gene062985.t1	AT1G19830	57.353	68	27	2	21	87	46	112	2.40e-18	73.6
MS.gene062985.t1	AT2G18010	48.611	72	36	1	14	85	39	109	8.10e-17	69.7
MS.gene062985.t1	AT3G43120	54.237	59	26	1	22	80	78	135	1.02e-16	70.5
MS.gene062985.t1	AT3G20220	53.125	64	28	2	24	86	48	110	1.29e-16	69.3
MS.gene062985.t1	AT5G20810	55.932	59	25	1	22	80	78	135	8.10e-16	68.6
MS.gene062985.t1	AT2G37030	52.381	63	29	1	22	84	48	109	1.14e-15	67.0
MS.gene062985.t1	AT5G20810	55.932	59	25	1	22	80	78	135	1.42e-15	68.2
MS.gene062985.t1	AT5G66260	41.304	92	48	2	2	88	8	98	5.24e-15	64.7
MS.gene062985.t1	AT3G51200	49.153	59	29	1	25	83	42	99	3.65e-14	62.8
MS.gene062985.t1	AT3G53250	43.243	74	36	2	11	84	42	109	4.65e-14	62.8
MS.gene062985.t1	AT1G75590	44.048	84	39	3	4	80	16	98	5.68e-14	63.2
MS.gene062985.t1	AT3G53250	43.243	74	36	2	11	84	73	140	7.49e-14	63.2
MS.gene062985.t1	AT5G10990	45.070	71	38	1	10	80	28	97	1.31e-13	62.4
MS.gene062985.t1	AT1G19840	43.373	83	40	2	4	80	16	97	1.77e-13	62.0
MS.gene062985.t1	AT3G61900	43.662	71	36	2	22	89	29	98	3.31e-13	60.8
MS.gene062985.t1	AT4G34750	42.029	69	39	1	22	90	36	103	3.77e-13	61.2
MS.gene062985.t1	AT4G34750	42.029	69	39	1	22	90	36	103	3.77e-13	61.2
MS.gene062985.t1	AT2G45210	41.176	68	36	2	24	88	80	146	7.94e-13	60.5
MS.gene062985.t1	AT4G12410	44.118	68	34	2	24	88	77	143	9.37e-13	60.1
MS.gene062985.t1	AT4G22620	39.024	82	44	3	10	88	68	146	1.47e-12	59.7
MS.gene062985.t1	AT4G31320	51.667	60	28	1	24	83	81	139	3.14e-12	59.3
MS.gene062985.t1	AT3G60690	43.284	67	34	2	24	87	89	154	3.78e-12	58.9
MS.gene062985.t1	AT4G00880	47.059	68	33	2	24	89	29	95	4.09e-12	57.8
MS.gene062985.t1	AT2G46690	43.478	69	35	2	15	80	16	83	5.08e-12	57.4
MS.gene062985.t1	AT2G24400	51.667	60	28	1	24	83	65	123	6.82e-12	58.5
MS.gene062985.t1	AT2G36210	34.615	78	51	0	8	85	39	116	2.91e-11	55.8
MS.gene062985.t1	AT3G12830	39.241	79	44	2	9	87	39	113	4.49e-11	55.5

Find 26 sgRNAs with CRISPR-Local

Find 26 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GGTTGGTTTAAGTATGATAT+TGG	0.286782	4.2:+35391006	None:intergenic
AATTTCCTCTCCCACATATA+CGG	0.318798	4.2:+35391044	None:intergenic
GTTGGTTTAAGTATGATATT+GGG	0.370306	4.2:+35391007	None:intergenic
GATGCCCTTGTGATGATAAC+AGG	0.390427	4.2:+35391114	None:intergenic
CCACACCCTTTGAAGATGCT+TGG	0.444906	4.2:+35391088	None:intergenic
GGGATATCTTGCCGTATATG+TGG	0.487155	4.2:-35391055	MS.gene062985:CDS
TTCAGCAGTTCTTGAAATGA+TGG	0.497296	4.2:+35390985	None:intergenic
TTCGAATATGATCATCCAAT+GGG	0.511444	4.2:-35390946	MS.gene062985:CDS
CCAAGCATCTTCAAAGGGTG+TGG	0.518182	4.2:-35391088	MS.gene062985:CDS
GCAGTTCTTGAAATGATGGT+TGG	0.526801	4.2:+35390989	None:intergenic
TATACGGCAAGATATCCCTT+TGG	0.542745	4.2:+35391060	None:intergenic
ATTCGAATATGATCATCCAA+TGG	0.544520	4.2:-35390947	MS.gene062985:CDS
ATCAAACCAAGCATCTTCAA+AGG	0.547858	4.2:-35391094	MS.gene062985:CDS
ATATCACTTCTCGCTTGAGT+AGG	0.558383	4.2:-35390885	MS.gene062985:CDS
AAAGGGTGTGGATGAGCCAA+AGG	0.570313	4.2:-35391076	MS.gene062985:CDS
TCAAACCAAGCATCTTCAAA+GGG	0.571970	4.2:-35391093	MS.gene062985:CDS
TCTTGCCGTATATGTGGGAG+AGG	0.580806	4.2:-35391049	MS.gene062985:CDS
GGATATCTTGCCGTATATGT+GGG	0.581962	4.2:-35391054	MS.gene062985:CDS
GTTTACCTGTTATCATCACA+AGG	0.599022	4.2:-35391119	MS.gene062985:CDS
AAGAACACATCTTCTCTGCA+TGG	0.602229	4.2:+35390910	None:intergenic
GGAATAGTGAGACCACCCAT+TGG	0.603922	4.2:+35390931	None:intergenic
AAGGGTGTGGATGAGCCAAA+GGG	0.624910	4.2:-35391075	MS.gene062985:CDS
AGAACTGCTGAATCAAGCTG+AGG	0.650449	4.2:-35390974	MS.gene062985:CDS
GAATATGATCATCCAATGGG+TGG	0.654072	4.2:-35390943	MS.gene062985:CDS
TTTACCTGTTATCATCACAA+GGG	0.671036	4.2:-35391118	MS.gene062985:CDS
ATGTGGGAGAGGAAATTAAG+CGG	0.692919	4.2:-35391038	MS.gene062985:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	GTTGGTTTAAGTATGATATT+GGG	+	chr4.2:35391004-35391023	None:intergenic	25.0%
	ATTCGAATATGATCATCCAA+TGG	-	chr4.2:35391061-35391080	MS.gene062985:CDS	30.0%
	TTCGAATATGATCATCCAAT+GGG	-	chr4.2:35391062-35391081	MS.gene062985:CDS	30.0%
	TTTACCTGTTATCATCACAA+GGG	-	chr4.2:35390890-35390909	MS.gene062985:CDS	30.0%
!!	GGTTGGTTTAAGTATGATAT+TGG	+	chr4.2:35391005-35391024	None:intergenic	30.0%
	AATTTCCTCTCCCACATATA+CGG	+	chr4.2:35390967-35390986	None:intergenic	35.0%
	ATCAAACCAAGCATCTTCAA+AGG	-	chr4.2:35390914-35390933	MS.gene062985:CDS	35.0%
	GTTTACCTGTTATCATCACA+AGG	-	chr4.2:35390889-35390908	MS.gene062985:CDS	35.0%
	TCAAACCAAGCATCTTCAAA+GGG	-	chr4.2:35390915-35390934	MS.gene062985:CDS	35.0%
	TTCAGCAGTTCTTGAAATGA+TGG	+	chr4.2:35391026-35391045	None:intergenic	35.0%
	AAGAACACATCTTCTCTGCA+TGG	+	chr4.2:35391101-35391120	None:intergenic	40.0%
	ATATCACTTCTCGCTTGAGT+AGG	-	chr4.2:35391123-35391142	MS.gene062985:CDS	40.0%
	ATGTGGGAGAGGAAATTAAG+CGG	-	chr4.2:35390970-35390989	MS.gene062985:CDS	40.0%
	GAATATGATCATCCAATGGG+TGG	-	chr4.2:35391065-35391084	MS.gene062985:CDS	40.0%
	GCAGTTCTTGAAATGATGGT+TGG	+	chr4.2:35391022-35391041	None:intergenic	40.0%
	GGATATCTTGCCGTATATGT+GGG	-	chr4.2:35390954-35390973	MS.gene062985:CDS	40.0%
	TATACGGCAAGATATCCCTT+TGG	+	chr4.2:35390951-35390970	None:intergenic	40.0%
	AGAACTGCTGAATCAAGCTG+AGG	-	chr4.2:35391034-35391053	MS.gene062985:CDS	45.0%
	GATGCCCTTGTGATGATAAC+AGG	+	chr4.2:35390897-35390916	None:intergenic	45.0%
	GGGATATCTTGCCGTATATG+TGG	-	chr4.2:35390953-35390972	MS.gene062985:CDS	45.0%
	CCAAGCATCTTCAAAGGGTG+TGG	-	chr4.2:35390920-35390939	MS.gene062985:CDS	50.0%
	GGAATAGTGAGACCACCCAT+TGG	+	chr4.2:35391080-35391099	None:intergenic	50.0%
	TCTTGCCGTATATGTGGGAG+AGG	-	chr4.2:35390959-35390978	MS.gene062985:CDS	50.0%
!	AAAGGGTGTGGATGAGCCAA+AGG	-	chr4.2:35390932-35390951	MS.gene062985:CDS	50.0%
!	AAGGGTGTGGATGAGCCAAA+GGG	-	chr4.2:35390933-35390952	MS.gene062985:CDS	50.0%
!	CCACACCCTTTGAAGATGCT+TGG	+	chr4.2:35390923-35390942	None:intergenic	50.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.2	gene	35390879	35391151	35390879	ID=MS.gene062985
chr4.2	mRNA	35390879	35391151	35390879	ID=MS.gene062985.t1;Parent=MS.gene062985
chr4.2	exon	35390879	35391151	35390879	ID=MS.gene062985.t1.exon1;Parent=MS.gene062985.t1
chr4.2	CDS	35390879	35391151	35390879	ID=cds.MS.gene062985.t1;Parent=MS.gene062985.t1

Gene Sequence	>MS.gene062985 ATGGGTTTTCGTTTACCTGTTATCATCACAAGGGCATCAAACCAAGCATCTTCAAAGGGTGTGGATGAGCCAAAGGGATATCTTGCCGTATATGTGGGAGAGGAAATTAAGCGGTTTGTGATCCCAATATCATACTTAAACCAACCATCATTTCAAGAACTGCTGAATCAAGCTGAGGAACAATTCGAATATGATCATCCAATGGGTGGTCTCACTATTCCATGCAGAGAAGATGTGTTCTTAGATATCACTTCTCGCTTGAGTAGGTTGTAG
Protein sequence	>MS.gene062985.t1 MGFRLPVIITRASNQASSKGVDEPKGYLAVYVGEEIKRFVIPISYLNQPSFQELLNQAEEQFEYDHPMGGLTIPCREDVFLDITSRLSRL