AlfalfaGEDB | MS.gene062986

M. sativa cultivar XinJiangDaYe / MS.gene062986

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062986.t1	AES89353.1	95.7	94	4	0	1	94	1	94	4.60E-44	186.8

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062986.t1	P33083	75.0	92	21	1	1	92	1	90	6.3e-34	144.4

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062986.t1	G7JMB0	95.7	94	4	0	1	94	1	94	3.3e-44	186.8

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene01358	MS.gene062986	PPI
MS.gene014668	MS.gene062986	PPI
MS.gene003608	MS.gene062986	PPI
MS.gene75675	MS.gene062986	PPI
MS.gene003583	MS.gene062986	PPI
MS.gene79888	MS.gene062986	PPI
MS.gene40326	MS.gene062986	PPI
MS.gene062952	MS.gene062986	PPI
MS.gene77527	MS.gene062986	PPI
MS.gene50654	MS.gene062986	PPI
MS.gene031199	MS.gene062986	PPI
MS.gene50676	MS.gene062986	PPI
MS.gene003614	MS.gene062986	PPI
MS.gene057797	MS.gene062986	PPI
MS.gene50652	MS.gene062986	PPI
MS.gene23370	MS.gene062986	PPI
MS.gene50766	MS.gene062986	PPI
MS.gene77529	MS.gene062986	PPI
MS.gene014667	MS.gene062986	PPI
MS.gene003594	MS.gene062986	PPI
MS.gene003596	MS.gene062986	PPI
MS.gene50665	MS.gene062986	PPI
MS.gene79889	MS.gene062986	PPI
MS.gene50677	MS.gene062986	PPI
MS.gene68759	MS.gene062986	PPI
MS.gene003586	MS.gene062986	PPI
MS.gene062988	MS.gene062986	PPI
MS.gene75673	MS.gene062986	PPI
MS.gene062986	MS.gene68163	PPI
MS.gene77528	MS.gene062986	PPI
MS.gene50763	MS.gene062986	PPI
MS.gene031198	MS.gene062986	PPI
MS.gene031200	MS.gene062986	PPI
MS.gene045365	MS.gene062986	PPI
MS.gene79885	MS.gene062986	PPI
MS.gene50659	MS.gene062986	PPI
MS.gene75316	MS.gene062986	PPI
MS.gene062986	MS.gene75678	PPI
MS.gene057790	MS.gene062986	PPI
MS.gene045363	MS.gene062986	PPI
MS.gene003624	MS.gene062986	PPI
MS.gene23371	MS.gene062986	PPI
MS.gene031201	MS.gene062986	PPI
MS.gene75314	MS.gene062986	PPI
MS.gene68761	MS.gene062986	PPI
MS.gene68760	MS.gene062986	PPI
MS.gene75676	MS.gene062986	PPI
MS.gene062986	MS.gene50764	PPI
MS.gene062951	MS.gene062986	PPI
MS.gene062986	MS.gene014671	PPI
MS.gene057778	MS.gene062986	PPI
MS.gene045366	MS.gene062986	PPI
MS.gene062986	MS.gene75672	PPI
MS.gene062963	MS.gene062986	PPI
MS.gene68164	MS.gene062986	PPI
MS.gene062986	MS.gene062974	PPI
MS.gene75674	MS.gene062986	PPI
MS.gene79890	MS.gene062986	PPI
MS.gene062986	MS.gene014670	PPI
MS.gene003615	MS.gene062986	PPI
MS.gene045364	MS.gene062986	PPI
MS.gene062973	MS.gene062986	PPI
MS.gene003602	MS.gene062986	PPI
MS.gene23372	MS.gene062986	PPI
MS.gene003627	MS.gene062986	PPI
MS.gene003577	MS.gene062986	PPI
MS.gene77524	MS.gene062986	PPI
MS.gene062986	MS.gene75679	PPI
MS.gene062984	MS.gene062986	PPI
MS.gene057801	MS.gene062986	PPI
MS.gene014223	MS.gene062986	PPI
MS.gene014222	MS.gene062986	PPI
MS.gene40327	MS.gene062986	PPI
MS.gene062986	MS.gene50684	PPI
MS.gene045362	MS.gene062986	PPI
MS.gene062986	MS.gene79886	PPI
MS.gene77523	MS.gene062986	PPI
MS.gene062986	MS.gene50765	PPI
MS.gene003587	MS.gene062986	PPI
MS.gene003590	MS.gene062986	PPI
MS.gene045368	MS.gene062986	PPI
MS.gene063112	MS.gene062986	PPI
MS.gene79891	MS.gene062986	PPI
MS.gene79887	MS.gene062986	PPI
MS.gene062986	MS.gene045367	PPI
MS.gene77526	MS.gene062986	PPI
MS.gene047517	MS.gene062986	PPI
MS.gene045360	MS.gene062986	PPI
MS.gene014669	MS.gene062986	PPI
MS.gene057818	MS.gene062986	PPI
MS.gene062986	MS.gene057808	PPI
MS.gene062986	MS.gene002380	PPI
MS.gene68162	MS.gene062986	PPI
MS.gene50687	MS.gene062986	PPI
MS.gene75677	MS.gene062986	PPI
MS.gene003625	MS.gene062986	PPI
MS.gene057795	MS.gene062986	PPI
MS.gene68165	MS.gene062986	PPI
MS.gene01764	MS.gene062986	PPI
MS.gene045361	MS.gene062986	PPI
MS.gene50675	MS.gene062986	PPI
MS.gene062986	MS.gene75315	PPI
MS.gene003591	MS.gene062986	PPI
MS.gene062979	MS.gene062986	PPI
MS.gene40325	MS.gene062986	PPI
MS.gene062943	MS.gene062986	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062986.t1	MTR_4g072850	95.745	94	4	0	1	94	1	94	6.27e-55	165
MS.gene062986.t1	MTR_4g072310	80.851	94	17	1	1	94	1	93	7.34e-54	162
MS.gene062986.t1	MTR_4g072880	80.851	94	17	1	1	94	1	93	1.81e-53	161
MS.gene062986.t1	MTR_4g072250	84.783	92	12	2	1	92	1	90	7.63e-53	160
MS.gene062986.t1	MTR_4g072230	79.787	94	16	2	1	94	1	91	1.15e-51	157
MS.gene062986.t1	MTR_4g072860	79.787	94	18	1	1	94	1	93	2.12e-51	156
MS.gene062986.t1	MTR_4g072270	77.660	94	20	1	1	94	1	93	2.56e-50	154
MS.gene062986.t1	MTR_4g072940	91.304	92	8	0	3	94	33	124	8.36e-49	151
MS.gene062986.t1	MTR_3g084150	74.468	94	22	1	1	94	1	92	2.04e-48	149
MS.gene062986.t1	MTR_4g072500	74.468	94	22	2	1	94	1	92	2.18e-48	149
MS.gene062986.t1	MTR_4g072640	75.269	93	21	1	1	93	1	91	4.26e-48	148
MS.gene062986.t1	MTR_8g461410	73.404	94	23	1	1	94	1	92	5.61e-48	147
MS.gene062986.t1	MTR_3g084170	75.532	94	21	2	1	94	1	92	1.35e-47	147
MS.gene062986.t1	MTR_4g072530	73.913	92	22	2	1	92	1	90	1.67e-47	146
MS.gene062986.t1	MTR_3g084180	73.404	94	23	1	1	94	1	92	1.74e-47	146
MS.gene062986.t1	MTR_4g072570	74.468	94	22	1	1	94	1	92	3.11e-47	145
MS.gene062986.t1	MTR_3g084240	74.468	94	22	2	1	94	1	92	1.43e-46	144
MS.gene062986.t1	MTR_3g110038	73.404	94	23	2	1	94	1	92	3.04e-46	143
MS.gene062986.t1	MTR_3g117630	76.136	88	21	0	7	94	5	92	8.17e-46	142
MS.gene062986.t1	MTR_3g110042	77.528	89	18	1	1	89	1	87	1.36e-45	142
MS.gene062986.t1	MTR_4g072480	72.340	94	24	1	1	94	1	92	2.08e-45	141
MS.gene062986.t1	MTR_4g072240	69.565	92	27	1	1	92	1	91	3.19e-45	140
MS.gene062986.t1	MTR_4g050700	71.277	94	26	1	1	94	1	93	3.54e-45	140
MS.gene062986.t1	MTR_2g012410	71.277	94	26	1	1	94	1	93	3.54e-45	140
MS.gene062986.t1	MTR_3g084220	72.340	94	24	2	1	94	1	92	3.55e-45	140
MS.gene062986.t1	MTR_3g084250	71.277	94	25	1	1	94	1	92	9.33e-45	139
MS.gene062986.t1	MTR_4g072620	71.277	94	25	1	1	94	1	92	1.05e-44	139
MS.gene062986.t1	MTR_4g072220	68.085	94	29	1	1	94	1	93	1.66e-44	139
MS.gene062986.t1	MTR_4g072730	72.826	92	23	1	1	92	1	90	1.69e-44	139
MS.gene062986.t1	MTR_4g072680	71.277	94	25	1	1	94	1	92	3.19e-44	138
MS.gene062986.t1	MTR_3g110032	69.149	94	28	1	1	94	1	93	5.04e-44	137
MS.gene062986.t1	MTR_4g072370	71.739	92	22	1	1	92	1	88	5.62e-44	137
MS.gene062986.t1	MTR_4g072580	72.826	92	18	1	1	92	1	85	5.99e-44	137
MS.gene062986.t1	MTR_4g072740	73.913	92	17	1	1	92	1	85	1.77e-43	136
MS.gene062986.t1	MTR_4g072490	71.739	92	19	1	1	92	1	85	3.45e-43	135
MS.gene062986.t1	MTR_4g072870	67.391	92	29	1	1	92	1	91	3.90e-43	135
MS.gene062986.t1	MTR_4g072300	66.304	92	30	1	1	92	1	91	8.14e-43	134
MS.gene062986.t1	MTR_4g072460	69.149	94	27	1	1	94	1	92	9.05e-43	134
MS.gene062986.t1	MTR_4g072330	68.478	92	25	1	1	92	1	88	9.21e-43	134
MS.gene062986.t1	MTR_3g084260	70.652	92	26	1	1	92	1	91	1.63e-42	134
MS.gene062986.t1	MTR_4g072260	63.830	94	33	1	1	94	1	93	1.90e-41	131
MS.gene062986.t1	MTR_4g072600	69.565	92	21	1	1	92	1	85	3.48e-41	130
MS.gene062986.t1	MTR_4g072890	65.217	92	31	1	1	92	1	91	3.62e-41	130
MS.gene062986.t1	MTR_4g072830	70.330	91	23	1	1	91	1	87	4.43e-41	130
MS.gene062986.t1	MTR_4g072470	69.565	92	21	1	1	92	1	85	5.74e-41	130
MS.gene062986.t1	MTR_4g072610	71.739	92	18	1	1	92	1	84	7.20e-41	129
MS.gene062986.t1	MTR_5g008360	75.949	79	19	0	16	94	5	83	1.91e-40	128
MS.gene062986.t1	MTR_3g084190	71.277	94	25	2	1	94	1	92	2.13e-40	129
MS.gene062986.t1	MTR_5g008370	69.149	94	23	2	1	92	1	90	3.31e-40	129
MS.gene062986.t1	MTR_8g461420	69.149	94	27	2	1	94	1	92	1.06e-39	127
MS.gene062986.t1	MTR_4g072660	65.957	94	25	1	1	94	1	87	1.08e-39	127
MS.gene062986.t1	MTR_3g084210	69.149	94	27	1	1	94	1	92	2.33e-39	126
MS.gene062986.t1	MTR_3g084230	69.149	94	27	1	1	94	1	92	2.97e-39	125
MS.gene062986.t1	MTR_4g072820	69.892	93	19	3	1	92	1	85	3.46e-39	125
MS.gene062986.t1	MTR_4g072630	67.391	92	24	1	1	92	1	86	3.61e-39	125
MS.gene062986.t1	MTR_3g110045	71.739	92	24	1	3	94	62	151	1.75e-38	125
MS.gene062986.t1	MTR_4g072650	69.565	92	20	2	1	92	1	84	1.91e-38	123
MS.gene062986.t1	MTR_4g072465	65.217	92	26	1	1	92	1	86	2.57e-38	123
MS.gene062986.t1	MTR_4g072540	69.565	92	22	1	1	92	1	86	2.97e-38	123
MS.gene062986.t1	MTR_3g084160	69.149	94	27	2	1	94	1	92	6.46e-38	122
MS.gene062986.t1	MTR_4g072380	68.817	93	21	2	1	92	1	86	6.51e-38	122
MS.gene062986.t1	MTR_4g072670	68.478	92	23	1	1	92	1	86	2.60e-37	120
MS.gene062986.t1	MTR_4g072720	68.478	92	23	1	1	92	1	86	1.29e-36	119
MS.gene062986.t1	MTR_4g072290	62.766	94	20	2	1	94	1	79	5.47e-36	117
MS.gene062986.t1	MTR_4g072550	63.636	88	29	1	7	94	19	103	1.07e-35	117
MS.gene062986.t1	MTR_4g072590	66.304	92	24	1	1	92	1	85	1.38e-35	116
MS.gene062986.t1	MTR_4g072510	67.391	92	24	1	1	92	1	86	2.60e-35	115
MS.gene062986.t1	MTR_4g072910	68.919	74	23	0	19	92	27	100	2.15e-34	114
MS.gene062986.t1	MTR_4g072980	56.522	92	39	1	1	91	1	92	1.26e-33	111
MS.gene062986.t1	MTR_4g072560	54.639	97	38	2	1	91	1	97	1.41e-33	111
MS.gene062986.t1	MTR_4g072450	65.217	92	25	1	1	92	1	85	1.51e-33	111
MS.gene062986.t1	MTR_5g008350	66.667	81	20	1	1	81	1	74	2.13e-33	110
MS.gene062986.t1	MTR_3g084200	71.622	74	19	2	1	74	1	72	6.63e-33	110
MS.gene062986.t1	MTR_4g072690	64.130	92	26	1	1	92	1	85	1.56e-32	108
MS.gene062986.t1	MTR_4g072770	57.609	92	27	2	1	92	1	80	6.89e-30	102
MS.gene062986.t1	MTR_3g117640	48.000	100	44	2	1	92	1	100	1.87e-29	101
MS.gene062986.t1	MTR_4g072750	65.753	73	25	0	1	73	1	73	6.89e-29	99.4
MS.gene062986.t1	MTR_4g072280	60.526	76	29	1	1	76	1	75	4.35e-28	97.4
MS.gene062986.t1	MTR_3g110035	65.152	66	23	0	29	94	73	138	2.18e-26	94.7
MS.gene062986.t1	MTR_8g461400	55.319	94	14	3	1	94	1	66	1.26e-25	90.9
MS.gene062986.t1	MTR_3g113310	56.716	67	28	1	25	91	40	105	4.59e-25	90.5
MS.gene062986.t1	MTR_6g077850	55.224	67	30	0	26	92	33	99	4.63e-25	90.5
MS.gene062986.t1	MTR_4g072190	50.575	87	39	2	5	91	17	99	6.50e-25	90.1
MS.gene062986.t1	MTR_3g117610	48.913	92	39	2	5	89	16	106	1.25e-24	89.7
MS.gene062986.t1	MTR_4g072930	49.451	91	37	3	11	92	20	110	2.72e-24	88.6
MS.gene062986.t1	MTR_5g021820	47.126	87	42	2	8	91	18	103	4.27e-23	85.5
MS.gene062986.t1	MTR_8g076040	47.059	85	41	2	8	89	19	102	4.06e-22	83.2
MS.gene062986.t1	MTR_4g072840	52.688	93	10	4	1	92	1	60	5.75e-21	79.0
MS.gene062986.t1	MTR_2g043960	46.429	84	44	1	4	87	53	135	1.34e-19	78.2
MS.gene062986.t1	MTR_4g124750	45.349	86	46	1	4	89	46	130	4.27e-19	76.6
MS.gene062986.t1	MTR_4g025830	48.529	68	31	2	27	91	79	145	3.37e-18	74.7
MS.gene062986.t1	MTR_1g024085	43.373	83	45	2	4	85	13	94	5.44e-17	70.9
MS.gene062986.t1	MTR_7g118010	48.529	68	32	2	27	92	23	89	1.27e-16	68.9
MS.gene062986.t1	MTR_0388s0020	43.902	82	41	3	13	91	62	141	1.44e-16	70.1
MS.gene062986.t1	MTR_3g092220	50.000	66	30	2	22	85	28	92	3.38e-16	68.2
MS.gene062986.t1	MTR_4g005310	44.304	79	40	2	10	87	48	123	9.15e-16	68.2
MS.gene062986.t1	MTR_1g094750	44.186	86	44	2	11	93	31	115	9.53e-16	67.0
MS.gene062986.t1	MTR_8g026730	44.118	68	35	2	27	92	27	93	3.02e-15	65.5
MS.gene062986.t1	MTR_4g072160	50.000	62	30	1	26	87	36	96	3.12e-15	66.2
MS.gene062986.t1	MTR_1g009150	52.459	61	28	1	27	87	71	130	4.88e-15	66.6
MS.gene062986.t1	MTR_1g061570	48.387	62	31	1	26	87	18	78	5.08e-15	65.5
MS.gene062986.t1	MTR_8g461210	41.176	85	48	2	3	87	12	94	8.16e-15	64.7
MS.gene062986.t1	MTR_1g063950	47.458	59	30	1	26	84	47	104	3.39e-14	63.2
MS.gene062986.t1	MTR_4g005320	42.857	84	42	3	9	87	47	129	4.49e-14	63.9
MS.gene062986.t1	MTR_7g101740	46.875	64	33	1	26	89	39	101	5.96e-14	62.4
MS.gene062986.t1	MTR_1g059770	38.462	65	39	1	27	91	49	112	7.99e-14	62.4
MS.gene062986.t1	MTR_3g109160	52.459	61	28	1	27	87	69	128	3.28e-13	62.0
MS.gene062986.t1	MTR_3g098970	30.682	88	59	2	8	94	33	119	1.35e-12	59.7
MS.gene062986.t1	MTR_8g101520	42.424	66	37	1	28	93	51	115	1.65e-12	59.7
MS.gene062986.t1	MTR_7g405740	44.262	61	33	1	27	87	67	126	2.16e-12	59.7
MS.gene062986.t1	MTR_3g097120	40.506	79	38	2	23	93	5	82	2.36e-12	58.2
MS.gene062986.t1	MTR_7g104950	34.722	72	46	1	20	91	43	113	3.07e-12	58.5
MS.gene062986.t1	MTR_3g105900	65.789	38	13	0	24	61	1169	1206	6.55e-12	60.1
MS.gene062986.t1	MTR_7g104940	37.097	62	38	1	30	91	53	113	8.78e-12	57.4
MS.gene062986.t1	MTR_4g021810	42.353	85	44	3	4	87	6	86	1.81e-11	55.8
MS.gene062986.t1	MTR_2g066830	34.409	93	48	3	2	92	41	122	2.42e-11	56.2
MS.gene062986.t1	MTR_8g096470	41.667	60	34	1	28	87	47	105	3.71e-11	55.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062986.t1	AT4G38840	56.566	99	36	2	1	92	1	99	4.52e-33	110
MS.gene062986.t1	AT5G18060	65.789	76	25	1	18	92	15	90	5.96e-33	110
MS.gene062986.t1	AT5G18050	64.474	76	26	1	18	92	15	90	9.87e-33	109
MS.gene062986.t1	AT5G18020	63.158	76	27	1	18	92	15	90	1.56e-32	108
MS.gene062986.t1	AT5G18080	65.789	76	25	1	18	92	15	90	2.15e-32	108
MS.gene062986.t1	AT4G38850	59.091	88	22	2	8	92	13	89	6.04e-31	104
MS.gene062986.t1	AT2G21200	65.278	72	24	1	21	91	15	86	1.13e-30	103
MS.gene062986.t1	AT5G18010	61.842	76	28	1	18	92	15	90	1.34e-30	103
MS.gene062986.t1	AT3G03840	65.278	72	23	1	23	92	23	94	1.38e-30	104
MS.gene062986.t1	AT2G21210	51.579	95	43	2	1	92	1	95	1.46e-30	104
MS.gene062986.t1	AT4G34770	53.922	102	37	3	1	92	1	102	1.60e-30	104
MS.gene062986.t1	AT5G18030	63.514	74	26	1	20	92	15	88	2.00e-30	103
MS.gene062986.t1	AT3G03850	71.642	67	17	1	28	92	26	92	3.17e-30	103
MS.gene062986.t1	AT2G21210	51.579	95	43	2	1	92	68	162	9.99e-30	104
MS.gene062986.t1	AT3G03820	58.228	79	30	1	17	92	17	95	3.48e-29	100
MS.gene062986.t1	AT4G38825	62.500	72	26	1	22	92	18	89	3.96e-29	100
MS.gene062986.t1	AT4G34800	55.696	79	32	1	9	84	3	81	4.89e-27	95.1
MS.gene062986.t1	AT3G03830	57.895	76	29	1	20	92	17	92	5.39e-27	95.1
MS.gene062986.t1	AT4G34810	52.222	90	37	3	8	91	28	117	1.69e-26	94.7
MS.gene062986.t1	AT4G13790	47.253	91	39	2	3	91	8	91	2.77e-25	90.5
MS.gene062986.t1	AT4G34780	56.944	72	28	1	24	92	25	96	1.26e-24	89.4
MS.gene062986.t1	AT2G21220	47.778	90	43	2	5	91	15	103	1.88e-24	89.0
MS.gene062986.t1	AT4G38860	47.253	91	45	1	5	92	15	105	2.41e-24	88.6
MS.gene062986.t1	AT4G34790	55.385	65	27	1	27	89	39	103	3.32e-23	85.9
MS.gene062986.t1	AT4G34760	56.716	67	28	1	25	91	41	106	5.41e-23	85.5
MS.gene062986.t1	AT1G75580	48.352	91	39	2	8	91	18	107	5.80e-23	85.1
MS.gene062986.t1	AT1G19830	58.824	68	26	2	25	91	46	112	1.49e-20	79.3
MS.gene062986.t1	AT4G36110	46.512	86	44	2	5	89	17	101	3.47e-20	78.2
MS.gene062986.t1	AT2G16580	46.591	88	40	2	8	89	19	105	3.58e-20	78.2
MS.gene062986.t1	AT5G66260	44.944	89	47	2	5	92	11	98	2.01e-19	75.9
MS.gene062986.t1	AT2G18010	42.857	91	42	2	8	89	20	109	3.04e-19	75.9
MS.gene062986.t1	AT3G43120	47.368	76	39	1	12	87	64	138	3.95e-19	77.0
MS.gene062986.t1	AT1G19840	46.429	84	42	2	4	85	16	98	6.02e-18	73.6
MS.gene062986.t1	AT5G20810	45.238	84	45	1	4	87	56	138	6.51e-18	73.9
MS.gene062986.t1	AT5G20810	45.238	84	45	1	4	87	56	138	1.38e-17	73.6
MS.gene062986.t1	AT3G20220	47.297	74	37	2	18	90	38	110	1.83e-17	71.6
MS.gene062986.t1	AT1G75590	51.316	76	32	3	10	85	29	99	2.27e-17	72.4
MS.gene062986.t1	AT3G61900	44.872	78	39	2	18	92	21	97	3.54e-17	71.2
MS.gene062986.t1	AT3G60690	47.826	69	32	2	27	92	88	155	9.01e-17	71.2
MS.gene062986.t1	AT2G46690	42.857	84	43	3	13	92	9	91	9.60e-17	69.7
MS.gene062986.t1	AT3G51200	46.154	78	37	3	8	84	23	96	1.06e-16	69.3
MS.gene062986.t1	AT2G45210	42.466	73	38	2	22	91	74	145	1.28e-16	70.5
MS.gene062986.t1	AT5G10990	45.333	75	40	1	11	85	25	98	3.60e-16	68.9
MS.gene062986.t1	AT4G34750	43.939	66	36	1	24	89	34	98	7.82e-16	68.2
MS.gene062986.t1	AT4G34750	43.939	66	36	1	24	89	34	98	7.82e-16	68.2
MS.gene062986.t1	AT2G24400	44.706	85	40	2	9	93	52	129	6.14e-15	66.6
MS.gene062986.t1	AT4G00880	48.529	68	32	2	27	92	28	94	8.25e-15	65.1
MS.gene062986.t1	AT4G31320	44.304	79	37	2	9	87	68	139	9.01e-15	66.2
MS.gene062986.t1	AT4G12410	45.588	68	33	2	27	91	76	142	1.34e-14	65.1
MS.gene062986.t1	AT5G53590	42.466	73	36	2	26	93	45	116	1.48e-14	64.7
MS.gene062986.t1	AT3G12830	40.230	87	47	2	10	92	29	114	1.87e-14	64.3
MS.gene062986.t1	AT2G37030	49.153	59	29	1	26	84	48	105	5.13e-14	62.8
MS.gene062986.t1	AT4G22620	40.278	72	39	2	23	91	75	145	1.69e-13	62.4
MS.gene062986.t1	AT3G03847	65.000	40	14	0	45	84	88	127	1.82e-12	58.9
MS.gene062986.t1	AT3G53250	45.763	59	28	1	26	84	51	105	4.75e-12	57.8
MS.gene062986.t1	AT3G53250	45.763	59	28	1	26	84	82	136	6.71e-12	58.2
MS.gene062986.t1	AT1G56150	40.909	66	38	1	27	92	38	102	1.24e-11	56.6
MS.gene062986.t1	AT4G09530	42.254	71	35	3	18	85	22	89	1.96e-11	55.8
MS.gene062986.t1	AT2G36210	39.683	63	38	0	27	89	54	116	2.55e-11	56.2
MS.gene062986.t1	AT1G16510	36.232	69	43	1	23	91	50	117	6.95e-11	55.5

Find 22 sgRNAs with CRISPR-Local

Find 23 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GTTTACCTGGTATCATTAGA+AGG	0.397060	4.2:+35386816	MS.gene062986:CDS
AGTCAAGCCGAAGAAGAGTT+TGG	0.400452	4.2:+35386983	MS.gene062986:CDS
ATCATATCCAAACTCTTCTT+CGG	0.425222	4.2:-35386990	None:intergenic
AAAAGTTGTGGACGTGCCAA+AGG	0.503430	4.2:+35386871	MS.gene062986:CDS
GCAAATCTTGAAACAATGGT+TGG	0.511544	4.2:-35386958	None:intergenic
CCGATCAGTTTCAAAAGTTG+TGG	0.514540	4.2:+35386859	MS.gene062986:CDS
GGTTGGTTCAAGTATGATAC+GGG	0.515731	4.2:-35386941	None:intergenic
CTCAGCAAATCTTGAAACAA+TGG	0.518561	4.2:-35386962	None:intergenic
TGGTTGGTTCAAGTATGATA+CGG	0.529215	4.2:-35386942	None:intergenic
GACATCTTCGGTGCAAGGAA+TGG	0.540062	4.2:-35387032	None:intergenic
TTTGGATATGATCATCCAAT+GGG	0.545525	4.2:+35387001	MS.gene062986:CDS
GGCTATCTTGCAGTGTACAT+TGG	0.549606	4.2:+35386893	MS.gene062986:CDS
TACACTGCAAGATAGCCCTT+TGG	0.553564	4.2:-35386887	None:intergenic
GGAATGGTGAGGCCACCCAT+TGG	0.562484	4.2:-35387016	None:intergenic
AAAGTTGTGGACGTGCCAAA+GGG	0.566864	4.2:+35386872	MS.gene062986:CDS
GTTTGGATATGATCATCCAA+TGG	0.573812	4.2:+35387000	MS.gene062986:CDS
TGAAAGACATCTTCGGTGCA+AGG	0.581063	4.2:-35387037	None:intergenic
TATATGTTGAAAGACATCTT+CGG	0.586920	4.2:-35387044	None:intergenic
GATGACCTTCTAATGATACC+AGG	0.640691	4.2:-35386821	None:intergenic
GGATATGATCATCCAATGGG+TGG	0.648071	4.2:+35387004	MS.gene062986:CDS
CTTCGGTGCAAGGAATGGTG+AGG	0.671810	4.2:-35387027	None:intergenic
GTTGGTTCAAGTATGATACG+GGG	0.774992	4.2:-35386940	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	TATATGTTGAAAGACATCTT+CGG	-	chr4.2:35387047-35387066	None:intergenic	25.0%
	ATCATATCCAAACTCTTCTT+CGG	-	chr4.2:35386993-35387012	None:intergenic	30.0%
	TTTGGATATGATCATCCAAT+GGG	+	chr4.2:35387001-35387020	MS.gene062986:CDS	30.0%
	CTCAGCAAATCTTGAAACAA+TGG	-	chr4.2:35386965-35386984	None:intergenic	35.0%
	GCAAATCTTGAAACAATGGT+TGG	-	chr4.2:35386961-35386980	None:intergenic	35.0%
	GTTTACCTGGTATCATTAGA+AGG	+	chr4.2:35386816-35386835	MS.gene062986:CDS	35.0%
	GTTTGGATATGATCATCCAA+TGG	+	chr4.2:35387000-35387019	MS.gene062986:CDS	35.0%
!	TGGTTGGTTCAAGTATGATA+CGG	-	chr4.2:35386945-35386964	None:intergenic	35.0%
!!!	CCACAACTTTTGAAACTGAT+CGG	-	chr4.2:35386862-35386881	None:intergenic	35.0%
	CCGATCAGTTTCAAAAGTTG+TGG	+	chr4.2:35386859-35386878	MS.gene062986:CDS	40.0%
	GATGACCTTCTAATGATACC+AGG	-	chr4.2:35386824-35386843	None:intergenic	40.0%
!	GGTTGGTTCAAGTATGATAC+GGG	-	chr4.2:35386944-35386963	None:intergenic	40.0%
!	GTTGGTTCAAGTATGATACG+GGG	-	chr4.2:35386943-35386962	None:intergenic	40.0%
	AAAAGTTGTGGACGTGCCAA+AGG	+	chr4.2:35386871-35386890	MS.gene062986:CDS	45.0%
	AAAGTTGTGGACGTGCCAAA+GGG	+	chr4.2:35386872-35386891	MS.gene062986:CDS	45.0%
	AGTCAAGCCGAAGAAGAGTT+TGG	+	chr4.2:35386983-35387002	MS.gene062986:CDS	45.0%
	GGATATGATCATCCAATGGG+TGG	+	chr4.2:35387004-35387023	MS.gene062986:CDS	45.0%
	GGCTATCTTGCAGTGTACAT+TGG	+	chr4.2:35386893-35386912	MS.gene062986:CDS	45.0%
	TACACTGCAAGATAGCCCTT+TGG	-	chr4.2:35386890-35386909	None:intergenic	45.0%
!	TGAAAGACATCTTCGGTGCA+AGG	-	chr4.2:35387040-35387059	None:intergenic	45.0%
!	GACATCTTCGGTGCAAGGAA+TGG	-	chr4.2:35387035-35387054	None:intergenic	50.0%
!	CTTCGGTGCAAGGAATGGTG+AGG	-	chr4.2:35387030-35387049	None:intergenic	55.0%
	GGAATGGTGAGGCCACCCAT+TGG	-	chr4.2:35387019-35387038	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.2	gene	35386806	35387090	35386806	ID=MS.gene062986
chr4.2	mRNA	35386806	35387090	35386806	ID=MS.gene062986.t1;Parent=MS.gene062986
chr4.2	exon	35386806	35387090	35386806	ID=MS.gene062986.t1.exon1;Parent=MS.gene062986.t1
chr4.2	CDS	35386806	35387090	35386806	ID=cds.MS.gene062986.t1;Parent=MS.gene062986.t1

Gene Sequence	>MS.gene062986 ATGGGTTTTCGTTTACCTGGTATCATTAGAAGGTCATCATCATTTACTTCAAGCCGATCAGTTTCAAAAGTTGTGGACGTGCCAAAGGGCTATCTTGCAGTGTACATTGGTGATAAACAAAAGAGAATTGTGATCCCCGTATCATACTTGAACCAACCATTGTTTCAAGATTTGCTGAGTCAAGCCGAAGAAGAGTTTGGATATGATCATCCAATGGGTGGCCTCACCATTCCTTGCACCGAAGATGTCTTTCAACATATAACTTCTCGCTTGAATGAGCTATGA
Protein sequence	>MS.gene062986.t1 MGFRLPGIIRRSSSFTSSRSVSKVVDVPKGYLAVYIGDKQKRIVIPVSYLNQPLFQDLLSQAEEEFGYDHPMGGLTIPCTEDVFQHITSRLNEL