AlfalfaGEDB | MS.gene062987

M. sativa cultivar XinJiangDaYe / MS.gene062987

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062987.t1	XP_003607158.1	94.5	91	5	0	1	91	1	91	2.70E-41	177.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062987.t1	P33079	71.4	91	26	0	1	91	1	91	5.1e-33	141.4

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062987.t1	B7FN73	94.5	91	5	0	1	91	1	91	1.9e-41	177.6

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene057779	MS.gene062987	0.898798	3.73E-77	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene003590	MS.gene062987	PPI
MS.gene062943	MS.gene062987	PPI
MS.gene003608	MS.gene062987	PPI
MS.gene40326	MS.gene062987	PPI
MS.gene062987	MS.gene014223	PPI
MS.gene50676	MS.gene062987	PPI
MS.gene057818	MS.gene062987	PPI
MS.gene50766	MS.gene062987	PPI
MS.gene062987	MS.gene014669	PPI
MS.gene062987	MS.gene057808	PPI
MS.gene003594	MS.gene062987	PPI
MS.gene50677	MS.gene062987	PPI
MS.gene003625	MS.gene062987	PPI
MS.gene062987	MS.gene68163	PPI
MS.gene50763	MS.gene062987	PPI
MS.gene062987	MS.gene79889	PPI
MS.gene01358	MS.gene062987	PPI
MS.gene062987	MS.gene014222	PPI
MS.gene062987	MS.gene79888	PPI
MS.gene50659	MS.gene062987	PPI
MS.gene062987	MS.gene75678	PPI
MS.gene062987	MS.gene75314	PPI
MS.gene062987	MS.gene01764	PPI
MS.gene057790	MS.gene062987	PPI
MS.gene062952	MS.gene062987	PPI
MS.gene003624	MS.gene062987	PPI
MS.gene031199	MS.gene062987	PPI
MS.gene062987	MS.gene79885	PPI
MS.gene23370	MS.gene062987	PPI
MS.gene77529	MS.gene062987	PPI
MS.gene68761	MS.gene062987	PPI
MS.gene014667	MS.gene062987	PPI
MS.gene68760	MS.gene062987	PPI
MS.gene062987	MS.gene031198	PPI
MS.gene75676	MS.gene062987	PPI
MS.gene50665	MS.gene062987	PPI
MS.gene062987	MS.gene50764	PPI
MS.gene003586	MS.gene062987	PPI
MS.gene057778	MS.gene062987	PPI
MS.gene062988	MS.gene062987	PPI
MS.gene75673	MS.gene062987	PPI
MS.gene045366	MS.gene062987	PPI
MS.gene062987	MS.gene75672	PPI
MS.gene062963	MS.gene062987	PPI
MS.gene062987	MS.gene50654	PPI
MS.gene75674	MS.gene062987	PPI
MS.gene031200	MS.gene062987	PPI
MS.gene062987	MS.gene014670	PPI
MS.gene045365	MS.gene062987	PPI
MS.gene062987	MS.gene77524	PPI
MS.gene003602	MS.gene062987	PPI
MS.gene23372	MS.gene062987	PPI
MS.gene75316	MS.gene062987	PPI
MS.gene062987	MS.gene79887	PPI
MS.gene003627	MS.gene062987	PPI
MS.gene003577	MS.gene062987	PPI
MS.gene062987	MS.gene75679	PPI
MS.gene062984	MS.gene062987	PPI
MS.gene062987	MS.gene40325	PPI
MS.gene23371	MS.gene062987	PPI
MS.gene031201	MS.gene062987	PPI
MS.gene062987	MS.gene50684	PPI
MS.gene062987	MS.gene057797	PPI
MS.gene062987	MS.gene003614	PPI
MS.gene062987	MS.gene014668	PPI
MS.gene045362	MS.gene062987	PPI
MS.gene062987	MS.gene77528	PPI
MS.gene062987	MS.gene79886	PPI
MS.gene062987	MS.gene014671	PPI
MS.gene77523	MS.gene062987	PPI
MS.gene062987	MS.gene50765	PPI
MS.gene062987	MS.gene003596	PPI
MS.gene003587	MS.gene062987	PPI
MS.gene045368	MS.gene062987	PPI
MS.gene063112	MS.gene062987	PPI
MS.gene062987	MS.gene062974	PPI
MS.gene79890	MS.gene062987	PPI
MS.gene062987	MS.gene003583	PPI
MS.gene062987	MS.gene062951	PPI
MS.gene062987	MS.gene057801	PPI
MS.gene003615	MS.gene062987	PPI
MS.gene062987	MS.gene77527	PPI
MS.gene062987	MS.gene79891	PPI
MS.gene062987	MS.gene68162	PPI
MS.gene062987	MS.gene045367	PPI
MS.gene062987	MS.gene045364	PPI
MS.gene062973	MS.gene062987	PPI
MS.gene062987	MS.gene045363	PPI
MS.gene77526	MS.gene062987	PPI
MS.gene047517	MS.gene062987	PPI
MS.gene062987	MS.gene75675	PPI
MS.gene045360	MS.gene062987	PPI
MS.gene062987	MS.gene50652	PPI
MS.gene062987	MS.gene002380	PPI
MS.gene50687	MS.gene062987	PPI
MS.gene40327	MS.gene062987	PPI
MS.gene75677	MS.gene062987	PPI
MS.gene057795	MS.gene062987	PPI
MS.gene68165	MS.gene062987	PPI
MS.gene045361	MS.gene062987	PPI
MS.gene50675	MS.gene062987	PPI
MS.gene062987	MS.gene75315	PPI
MS.gene003591	MS.gene062987	PPI
MS.gene062987	MS.gene68164	PPI
MS.gene062979	MS.gene062987	PPI
MS.gene062987	MS.gene68759	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062987.t1	MTR_4g072870	94.505	91	5	0	1	91	1	91	1.38e-60	179
MS.gene062987.t1	MTR_4g072240	82.418	91	16	0	1	91	1	91	1.17e-53	162
MS.gene062987.t1	MTR_4g072300	82.418	91	16	0	1	91	1	91	4.75e-53	160
MS.gene062987.t1	MTR_4g072260	81.319	91	17	0	1	91	1	91	6.04e-52	157
MS.gene062987.t1	MTR_4g072220	82.418	91	16	0	1	91	1	91	1.29e-51	157
MS.gene062987.t1	MTR_4g072890	81.319	91	17	0	1	91	1	91	1.48e-51	156
MS.gene062987.t1	MTR_4g072370	72.527	91	22	1	1	91	1	88	3.93e-46	143
MS.gene062987.t1	MTR_4g072330	72.527	91	22	1	1	91	1	88	1.81e-45	141
MS.gene062987.t1	MTR_4g072310	69.231	91	28	0	1	91	1	91	2.72e-45	140
MS.gene062987.t1	MTR_4g072740	74.725	91	17	1	1	91	1	85	7.33e-45	139
MS.gene062987.t1	MTR_3g110038	72.527	91	24	1	1	91	1	90	9.95e-45	139
MS.gene062987.t1	MTR_4g072500	69.231	91	27	1	1	91	1	90	1.27e-44	139
MS.gene062987.t1	MTR_3g084150	70.330	91	26	1	1	91	1	90	1.32e-44	139
MS.gene062987.t1	MTR_4g072470	72.527	91	19	1	1	91	1	85	2.86e-44	138
MS.gene062987.t1	MTR_4g072830	72.222	90	22	1	1	90	1	87	4.08e-44	137
MS.gene062987.t1	MTR_3g084240	70.330	91	26	1	1	91	1	90	6.36e-44	137
MS.gene062987.t1	MTR_4g072490	72.527	91	19	1	1	91	1	85	8.85e-44	137
MS.gene062987.t1	MTR_3g084180	69.231	91	27	1	1	91	1	90	9.23e-44	137
MS.gene062987.t1	MTR_4g072570	69.231	91	27	1	1	91	1	90	2.17e-43	136
MS.gene062987.t1	MTR_3g084170	70.330	91	26	1	1	91	1	90	2.27e-43	136
MS.gene062987.t1	MTR_8g461410	68.132	91	28	1	1	91	1	90	3.52e-43	135
MS.gene062987.t1	MTR_4g072580	69.231	91	22	1	1	91	1	85	4.66e-43	135
MS.gene062987.t1	MTR_4g072530	67.033	91	29	1	1	91	1	90	4.87e-43	135
MS.gene062987.t1	MTR_4g072640	68.132	91	28	1	1	91	1	90	5.90e-43	135
MS.gene062987.t1	MTR_4g072880	68.132	91	29	0	1	91	1	91	6.28e-43	135
MS.gene062987.t1	MTR_4g072230	68.132	91	27	1	1	91	1	89	6.46e-43	135
MS.gene062987.t1	MTR_4g072860	70.330	91	27	0	1	91	1	91	6.93e-43	135
MS.gene062987.t1	MTR_4g072250	69.231	91	27	1	1	91	1	90	3.34e-42	133
MS.gene062987.t1	MTR_4g072630	70.330	91	22	1	1	91	1	86	3.84e-42	132
MS.gene062987.t1	MTR_3g084250	69.231	91	27	1	1	91	1	90	8.76e-42	132
MS.gene062987.t1	MTR_4g072480	68.132	91	28	1	1	91	1	90	1.93e-41	131
MS.gene062987.t1	MTR_4g072600	68.132	91	23	1	1	91	1	85	2.12e-41	130
MS.gene062987.t1	MTR_3g110032	64.835	91	32	0	1	91	1	91	2.17e-41	131
MS.gene062987.t1	MTR_4g072730	65.934	91	30	1	1	91	1	90	2.20e-41	131
MS.gene062987.t1	MTR_4g050700	65.934	91	31	0	1	91	1	91	2.79e-41	130
MS.gene062987.t1	MTR_2g012410	65.934	91	31	0	1	91	1	91	2.79e-41	130
MS.gene062987.t1	MTR_3g084220	67.033	91	29	1	1	91	1	90	5.91e-41	130
MS.gene062987.t1	MTR_3g117630	65.909	88	30	0	4	91	3	90	9.58e-41	129
MS.gene062987.t1	MTR_4g072680	65.934	91	30	1	1	91	1	90	1.52e-40	129
MS.gene062987.t1	MTR_4g072820	70.330	91	21	2	1	91	1	85	1.73e-40	128
MS.gene062987.t1	MTR_4g072270	64.835	91	32	0	1	91	1	91	2.22e-40	128
MS.gene062987.t1	MTR_4g072620	63.736	91	32	1	1	91	1	90	3.03e-40	128
MS.gene062987.t1	MTR_4g072850	70.652	92	26	1	1	91	1	92	1.02e-39	127
MS.gene062987.t1	MTR_3g084260	64.835	91	32	0	1	91	1	91	1.75e-39	126
MS.gene062987.t1	MTR_4g072460	64.835	91	31	1	1	91	1	90	2.04e-39	126
MS.gene062987.t1	MTR_3g110042	66.667	90	29	1	1	90	1	89	2.75e-39	125
MS.gene062987.t1	MTR_3g084190	71.429	91	25	1	1	91	1	90	3.35e-39	125
MS.gene062987.t1	MTR_3g084160	71.429	91	25	1	1	91	1	90	5.79e-39	125
MS.gene062987.t1	MTR_3g084210	68.132	91	28	1	1	91	1	90	1.49e-38	124
MS.gene062987.t1	MTR_4g072610	67.033	91	23	2	1	91	1	84	1.57e-38	124
MS.gene062987.t1	MTR_8g461420	69.231	91	27	1	1	91	1	90	3.35e-38	123
MS.gene062987.t1	MTR_4g072380	67.033	91	25	1	1	91	1	86	3.56e-38	123
MS.gene062987.t1	MTR_4g072540	67.033	91	25	1	1	91	1	86	4.86e-38	122
MS.gene062987.t1	MTR_4g072660	63.736	91	27	1	1	91	1	85	6.73e-38	122
MS.gene062987.t1	MTR_3g084230	69.231	91	27	1	1	91	1	90	6.75e-38	122
MS.gene062987.t1	MTR_4g072650	67.033	91	23	2	1	91	1	84	9.81e-38	121
MS.gene062987.t1	MTR_4g072940	68.889	90	27	1	3	91	33	122	4.98e-37	121
MS.gene062987.t1	MTR_4g072670	64.835	91	27	1	1	91	1	86	1.03e-36	119
MS.gene062987.t1	MTR_4g072465	61.538	91	30	1	1	91	1	86	1.11e-36	119
MS.gene062987.t1	MTR_4g072510	64.835	91	27	1	1	91	1	86	1.98e-36	118
MS.gene062987.t1	MTR_3g110045	71.084	83	24	0	9	91	67	149	2.75e-36	120
MS.gene062987.t1	MTR_4g072720	63.736	91	28	1	1	91	1	86	3.95e-36	117
MS.gene062987.t1	MTR_4g072590	77.612	67	15	0	25	91	19	85	1.19e-35	116
MS.gene062987.t1	MTR_4g072280	72.000	75	21	0	1	75	1	75	1.28e-35	116
MS.gene062987.t1	MTR_5g008350	70.000	80	18	1	1	80	1	74	1.52e-35	115
MS.gene062987.t1	MTR_4g072450	70.330	91	21	1	1	91	1	85	1.15e-34	114
MS.gene062987.t1	MTR_4g072690	70.330	91	21	1	1	91	1	85	3.33e-34	112
MS.gene062987.t1	MTR_4g072910	59.036	83	34	0	9	91	18	100	5.12e-34	112
MS.gene062987.t1	MTR_5g008360	67.568	74	24	0	18	91	8	81	6.28e-34	112
MS.gene062987.t1	MTR_5g008370	76.119	67	16	0	25	91	24	90	8.98e-34	113
MS.gene062987.t1	MTR_4g072550	64.103	78	28	0	14	91	24	101	2.77e-32	108
MS.gene062987.t1	MTR_4g072980	55.435	92	39	2	1	90	1	92	4.94e-32	107
MS.gene062987.t1	MTR_3g084200	67.123	73	23	1	1	73	1	72	3.17e-31	105
MS.gene062987.t1	MTR_4g072770	68.182	66	21	0	26	91	15	80	8.24e-31	103
MS.gene062987.t1	MTR_3g117640	67.164	67	21	1	26	91	34	100	2.80e-30	103
MS.gene062987.t1	MTR_4g072560	63.636	66	23	1	26	90	32	97	3.40e-29	100
MS.gene062987.t1	MTR_4g072750	65.333	75	23	2	1	73	1	74	5.49e-29	99.8
MS.gene062987.t1	MTR_4g072930	54.321	81	33	1	15	91	30	110	1.91e-28	99.0
MS.gene062987.t1	MTR_4g072290	52.747	91	29	1	1	91	1	77	5.78e-28	97.1
MS.gene062987.t1	MTR_3g110035	65.625	64	22	0	28	91	73	136	1.15e-25	92.8
MS.gene062987.t1	MTR_3g113310	50.000	92	39	3	5	90	15	105	1.88e-25	91.3
MS.gene062987.t1	MTR_3g117610	59.375	64	25	1	25	88	44	106	4.75e-23	85.5
MS.gene062987.t1	MTR_4g072190	48.837	86	41	2	5	90	17	99	5.12e-23	85.1
MS.gene062987.t1	MTR_6g077850	50.746	67	33	0	25	91	33	99	8.01e-23	84.3
MS.gene062987.t1	MTR_8g076040	49.451	91	35	3	5	88	16	102	1.84e-22	83.6
MS.gene062987.t1	MTR_5g021820	46.237	93	39	3	5	90	15	103	2.46e-21	80.9
MS.gene062987.t1	MTR_8g461400	48.352	91	20	2	1	91	1	64	3.34e-21	79.3
MS.gene062987.t1	MTR_4g124750	47.674	86	43	2	4	88	46	130	2.59e-20	79.7
MS.gene062987.t1	MTR_4g072840	49.451	91	15	3	1	91	1	60	4.21e-20	76.6
MS.gene062987.t1	MTR_2g043960	49.383	81	39	2	4	83	53	132	7.00e-20	79.0
MS.gene062987.t1	MTR_4g005310	52.113	71	33	1	14	83	50	120	1.12e-18	75.5
MS.gene062987.t1	MTR_4g072160	53.125	64	29	1	23	86	34	96	9.15e-18	72.8
MS.gene062987.t1	MTR_4g025830	49.296	71	32	2	23	90	76	145	9.43e-18	73.2
MS.gene062987.t1	MTR_0388s0020	44.444	81	41	2	13	90	62	141	1.06e-17	72.8
MS.gene062987.t1	MTR_3g092220	48.485	66	31	2	20	83	27	91	2.24e-16	68.6
MS.gene062987.t1	MTR_7g118010	47.059	68	33	2	26	91	23	89	2.68e-16	68.2
MS.gene062987.t1	MTR_1g024085	52.459	61	28	1	25	85	36	95	4.08e-16	68.6
MS.gene062987.t1	MTR_1g009150	49.254	67	33	1	17	83	62	127	7.00e-16	68.9
MS.gene062987.t1	MTR_1g094750	41.975	81	43	2	9	86	30	109	1.10e-15	66.6
MS.gene062987.t1	MTR_8g026730	50.000	60	27	2	26	83	27	85	3.63e-15	65.1
MS.gene062987.t1	MTR_1g061570	46.753	77	36	2	10	86	7	78	5.85e-15	65.1
MS.gene062987.t1	MTR_1g063950	41.096	73	42	1	14	86	36	107	1.37e-14	64.3
MS.gene062987.t1	MTR_8g461210	39.506	81	48	1	3	83	12	91	1.48e-14	63.9
MS.gene062987.t1	MTR_3g097120	44.872	78	34	2	21	90	4	80	1.73e-14	63.5
MS.gene062987.t1	MTR_1g059770	40.789	76	37	2	22	90	38	112	1.77e-14	63.9
MS.gene062987.t1	MTR_7g101740	44.000	75	41	1	14	88	28	101	1.87e-14	63.5
MS.gene062987.t1	MTR_3g109160	47.368	76	38	2	9	83	51	125	2.52e-14	64.7
MS.gene062987.t1	MTR_8g101520	47.692	65	33	1	27	91	51	114	2.84e-14	64.3
MS.gene062987.t1	MTR_4g005320	50.000	58	28	1	26	83	70	126	4.73e-14	63.9
MS.gene062987.t1	MTR_7g405740	47.541	61	31	1	26	86	67	126	6.21e-14	63.5
MS.gene062987.t1	MTR_7g104950	38.961	77	41	2	14	90	43	113	8.54e-14	62.4
MS.gene062987.t1	MTR_2g066830	47.170	53	27	1	26	78	58	109	2.46e-13	61.2
MS.gene062987.t1	MTR_8g096440	41.558	77	42	2	9	85	30	103	6.95e-13	60.5
MS.gene062987.t1	MTR_8g096470	45.000	60	32	1	27	86	47	105	8.99e-13	59.3
MS.gene062987.t1	MTR_3g098970	32.558	86	55	2	8	91	33	117	1.53e-12	59.7
MS.gene062987.t1	MTR_7g104940	38.158	76	41	2	15	90	44	113	1.72e-12	58.9
MS.gene062987.t1	MTR_8g094980	41.772	79	32	2	25	90	2	79	2.76e-12	57.8
MS.gene062987.t1	MTR_8g096500	46.667	60	31	1	26	85	49	107	5.19e-12	58.2
MS.gene062987.t1	MTR_4g021810	45.588	68	34	3	17	83	18	83	1.75e-11	55.8
MS.gene062987.t1	MTR_3g105900	58.537	41	17	0	25	65	1171	1211	2.38e-11	58.5
MS.gene062987.t1	MTR_2g095430	45.763	59	27	2	25	79	44	101	2.60e-11	55.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062987.t1	AT4G38840	63.529	85	30	1	8	91	15	99	7.12e-35	115
MS.gene062987.t1	AT2G21210	52.632	95	41	2	1	91	1	95	5.02e-33	110
MS.gene062987.t1	AT5G18080	61.842	76	28	1	17	91	15	90	2.86e-32	108
MS.gene062987.t1	AT2G21210	52.632	95	41	2	1	91	68	162	3.03e-32	110
MS.gene062987.t1	AT4G38825	62.667	75	27	1	18	91	15	89	4.41e-32	107
MS.gene062987.t1	AT5G18060	68.182	66	20	1	27	91	25	90	2.68e-31	105
MS.gene062987.t1	AT5G18020	57.895	76	31	1	17	91	15	90	3.54e-31	105
MS.gene062987.t1	AT5G18050	65.672	67	22	1	26	91	24	90	8.65e-31	104
MS.gene062987.t1	AT5G18030	58.228	79	32	1	14	91	10	88	1.31e-30	103
MS.gene062987.t1	AT4G34770	56.667	90	28	2	4	91	22	102	1.73e-30	103
MS.gene062987.t1	AT4G38850	56.322	87	25	2	8	91	13	89	1.81e-30	103
MS.gene062987.t1	AT5G18010	57.895	76	31	1	17	91	15	90	2.56e-30	103
MS.gene062987.t1	AT3G03820	56.471	85	34	1	10	91	11	95	2.97e-30	103
MS.gene062987.t1	AT2G21200	62.500	72	26	1	20	90	15	86	3.66e-30	102
MS.gene062987.t1	AT3G03840	61.333	75	27	1	19	91	20	94	4.05e-30	102
MS.gene062987.t1	AT3G03850	65.672	67	21	1	27	91	26	92	6.67e-29	99.8
MS.gene062987.t1	AT4G34800	51.685	89	35	2	1	86	1	84	1.25e-28	99.0
MS.gene062987.t1	AT4G34810	60.563	71	23	2	25	90	47	117	1.48e-27	97.1
MS.gene062987.t1	AT4G34790	64.615	65	21	1	26	88	39	103	3.16e-27	95.9
MS.gene062987.t1	AT4G34780	52.941	85	37	2	9	90	11	95	4.55e-26	92.8
MS.gene062987.t1	AT3G03830	53.571	84	34	2	13	91	9	92	5.27e-26	92.4
MS.gene062987.t1	AT4G13790	43.333	90	43	2	3	90	8	91	4.29e-24	87.4
MS.gene062987.t1	AT4G38860	46.809	94	40	2	5	91	15	105	6.68e-24	87.4
MS.gene062987.t1	AT1G75580	51.064	94	37	3	5	90	15	107	1.63e-23	86.7
MS.gene062987.t1	AT2G21220	46.667	90	43	3	5	90	15	103	4.60e-22	82.8
MS.gene062987.t1	AT4G36110	48.837	86	41	2	5	88	17	101	5.60e-22	82.4
MS.gene062987.t1	AT4G34760	47.872	94	38	4	5	90	16	106	7.72e-22	82.4
MS.gene062987.t1	AT1G19830	45.918	98	40	2	5	90	15	111	9.63e-22	82.4
MS.gene062987.t1	AT2G16580	47.253	91	40	2	5	88	16	105	2.81e-21	80.9
MS.gene062987.t1	AT3G43120	57.627	59	24	1	25	83	78	135	9.47e-20	78.6
MS.gene062987.t1	AT2G18010	43.617	94	42	2	5	88	17	109	1.42e-19	76.6
MS.gene062987.t1	AT5G20810	54.545	66	29	1	18	83	71	135	2.09e-19	77.8
MS.gene062987.t1	AT5G66260	46.067	89	45	2	5	91	11	98	3.21e-19	75.5
MS.gene062987.t1	AT5G20810	54.545	66	29	1	18	83	71	135	4.40e-19	77.4
MS.gene062987.t1	AT3G20220	53.846	65	28	2	26	89	47	110	4.40e-18	73.2
MS.gene062987.t1	AT3G51200	46.250	80	39	3	8	86	23	99	1.05e-16	69.3
MS.gene062987.t1	AT1G75590	52.459	61	28	1	25	85	41	100	3.48e-16	68.9
MS.gene062987.t1	AT5G10990	50.820	61	29	1	25	85	40	99	8.99e-16	67.8
MS.gene062987.t1	AT2G37030	46.032	63	33	1	25	87	48	109	1.19e-15	67.0
MS.gene062987.t1	AT1G19840	52.459	61	28	1	25	85	40	99	1.88e-15	67.0
MS.gene062987.t1	AT4G12410	48.529	68	31	2	26	90	76	142	3.14e-15	66.6
MS.gene062987.t1	AT4G34750	37.079	89	52	2	3	88	11	98	3.16e-15	66.6
MS.gene062987.t1	AT4G34750	37.079	89	52	2	3	88	11	98	3.16e-15	66.6
MS.gene062987.t1	AT2G45210	42.466	73	38	2	21	90	74	145	3.55e-15	66.6
MS.gene062987.t1	AT3G60690	45.588	68	33	2	26	90	88	154	4.41e-15	66.6
MS.gene062987.t1	AT3G61900	39.286	84	47	2	11	91	15	97	6.88e-15	65.5
MS.gene062987.t1	AT2G46690	47.761	67	31	2	20	83	18	83	7.81e-15	64.7
MS.gene062987.t1	AT4G00880	54.098	61	25	2	25	83	27	86	2.16e-14	63.5
MS.gene062987.t1	AT3G12830	46.053	76	33	3	3	78	34	101	2.62e-14	63.9
MS.gene062987.t1	AT3G53250	38.889	72	40	1	16	87	42	109	5.31e-14	62.8
MS.gene062987.t1	AT3G53250	38.889	72	40	1	16	87	73	140	1.10e-13	62.8
MS.gene062987.t1	AT4G22620	44.118	68	34	2	26	90	79	145	2.21e-13	62.0
MS.gene062987.t1	AT3G03847	56.604	53	21	2	34	86	80	130	3.33e-13	60.8
MS.gene062987.t1	AT1G56150	41.176	68	39	1	16	83	28	94	6.44e-13	59.7
MS.gene062987.t1	AT5G53590	38.889	72	38	2	25	91	45	115	1.17e-12	59.7
MS.gene062987.t1	AT4G31320	48.276	58	29	1	26	83	80	136	4.10e-12	59.3
MS.gene062987.t1	AT5G03310	43.478	69	32	3	24	86	37	104	4.62e-12	57.4
MS.gene062987.t1	AT2G24400	50.000	58	28	1	26	83	64	120	4.93e-12	58.9
MS.gene062987.t1	AT1G16510	44.828	58	31	1	26	83	54	110	8.73e-12	57.4
MS.gene062987.t1	AT4G09530	38.356	73	42	2	17	86	19	91	2.56e-11	55.5
MS.gene062987.t1	AT2G36210	39.062	64	39	0	25	88	53	116	8.87e-11	54.7

Find 21 sgRNAs with CRISPR-Local

Find 24 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AATCAAACAGAAGAAGAATT+TGG	0.263153	4.2:-35383029	MS.gene062987:CDS
CTTGCTAGATCCTTGAGTTT+TGG	0.285879	4.2:+35383160	None:intergenic
GGTTGGTTCAAGTATGATAC+TGG	0.408482	4.2:+35383071	None:intergenic
TAGACTGCGAGATAGCCTTT+TGG	0.442524	4.2:+35383125	None:intergenic
GGCTATCTCGCAGTCTATGT+TGG	0.463238	4.2:-35383119	MS.gene062987:CDS
TTTGGTTATGATCATCCAAT+GGG	0.474171	4.2:-35383011	MS.gene062987:CDS
GTATAGCCAGTATTATCAAA+AGG	0.485566	4.2:-35383193	MS.gene062987:CDS
TATAGCCAGTATTATCAAAA+GGG	0.519957	4.2:-35383192	MS.gene062987:CDS
TTTAGTAATTCTTGAAACAA+TGG	0.528370	4.2:+35383050	None:intergenic
ATTTGGTTATGATCATCCAA+TGG	0.535398	4.2:-35383012	MS.gene062987:CDS
AAGGGATATGAAGTTCCAAA+AGG	0.544324	4.2:-35383140	MS.gene062987:CDS
GTAATTCTTGAAACAATGGT+TGG	0.547064	4.2:+35383054	None:intergenic
CAAAACTCAAGGATCTAGCA+AGG	0.563912	4.2:-35383159	MS.gene062987:CDS
AAGAAAGCATCTTCACTGCA+AGG	0.587573	4.2:+35382975	None:intergenic
GCATCATCTTCCAAAACTCA+AGG	0.594606	4.2:-35383170	MS.gene062987:CDS
AAAACTCAAGGATCTAGCAA+GGG	0.632437	4.2:-35383158	MS.gene062987:CDS
TCTATGTTGGAGATCAAATG+AGG	0.633263	4.2:-35383106	MS.gene062987:CDS
TGGTTATGATCATCCAATGG+GGG	0.633887	4.2:-35383009	MS.gene062987:CDS
GGTTATGATCATCCAATGGG+GGG	0.652150	4.2:-35383008	MS.gene062987:CDS
TTGGTTATGATCATCCAATG+GGG	0.701814	4.2:-35383010	MS.gene062987:CDS
ATGTTGGAGATCAAATGAGG+CGG	0.701935	4.2:-35383103	MS.gene062987:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTTAGTAATTCTTGAAACAA+TGG	+	chr4.2:35383106-35383125	None:intergenic	20.0%
!	AATCAAACAGAAGAAGAATT+TGG	-	chr4.2:35383124-35383143	MS.gene062987:CDS	25.0%
!	TATAGCCAGTATTATCAAAA+GGG	-	chr4.2:35382961-35382980	MS.gene062987:CDS	25.0%
!!!	TTTTGATAATACTGGCTATA+CGG	+	chr4.2:35382961-35382980	None:intergenic	25.0%
	ATTTGGTTATGATCATCCAA+TGG	-	chr4.2:35383141-35383160	MS.gene062987:CDS	30.0%
	GTAATTCTTGAAACAATGGT+TGG	+	chr4.2:35383102-35383121	None:intergenic	30.0%
	GTATAGCCAGTATTATCAAA+AGG	-	chr4.2:35382960-35382979	MS.gene062987:CDS	30.0%
	TTTGGTTATGATCATCCAAT+GGG	-	chr4.2:35383142-35383161	MS.gene062987:CDS	30.0%
	AAAACTCAAGGATCTAGCAA+GGG	-	chr4.2:35382995-35383014	MS.gene062987:CDS	35.0%
	AAGGGATATGAAGTTCCAAA+AGG	-	chr4.2:35383013-35383032	MS.gene062987:CDS	35.0%
	TCTATGTTGGAGATCAAATG+AGG	-	chr4.2:35383047-35383066	MS.gene062987:CDS	35.0%
	TTGGTTATGATCATCCAATG+GGG	-	chr4.2:35383143-35383162	MS.gene062987:CDS	35.0%
!!	TGATGCCCTTTTGATAATAC+TGG	+	chr4.2:35382969-35382988	None:intergenic	35.0%
	ATGTTGGAGATCAAATGAGG+CGG	-	chr4.2:35383050-35383069	MS.gene062987:CDS	40.0%
	CAAAACTCAAGGATCTAGCA+AGG	-	chr4.2:35382994-35383013	MS.gene062987:CDS	40.0%
	GCATCATCTTCCAAAACTCA+AGG	-	chr4.2:35382983-35383002	MS.gene062987:CDS	40.0%
	TGGTTATGATCATCCAATGG+GGG	-	chr4.2:35383144-35383163	MS.gene062987:CDS	40.0%
!	CTTGCTAGATCCTTGAGTTT+TGG	+	chr4.2:35382996-35383015	None:intergenic	40.0%
!	GGTTGGTTCAAGTATGATAC+TGG	+	chr4.2:35383085-35383104	None:intergenic	40.0%
!!	AAGAAAGCATCTTCACTGCA+AGG	+	chr4.2:35383181-35383200	None:intergenic	40.0%
	GGTTATGATCATCCAATGGG+GGG	-	chr4.2:35383145-35383164	MS.gene062987:CDS	45.0%
!	TAGACTGCGAGATAGCCTTT+TGG	+	chr4.2:35383031-35383050	None:intergenic	45.0%
	GGCTATCTCGCAGTCTATGT+TGG	-	chr4.2:35383034-35383053	MS.gene062987:CDS	50.0%
	GGAATTGTGAGACCCCCCAT+TGG	+	chr4.2:35383160-35383179	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.2	gene	35382950	35383225	35382950	ID=MS.gene062987
chr4.2	mRNA	35382950	35383225	35382950	ID=MS.gene062987.t1;Parent=MS.gene062987
chr4.2	exon	35382950	35383225	35382950	ID=MS.gene062987.t1.exon1;Parent=MS.gene062987.t1
chr4.2	CDS	35382950	35383225	35382950	ID=cds.MS.gene062987.t1;Parent=MS.gene062987.t1

Gene Sequence	>MS.gene062987 ATGGGTTTCCGTATAGCCAGTATTATCAAAAGGGCATCATCTTCCAAAACTCAAGGATCTAGCAAGGGATATGAAGTTCCAAAAGGCTATCTCGCAGTCTATGTTGGAGATCAAATGAGGCGGTTTGTGATTCCAGTATCATACTTGAACCAACCATTGTTTCAAGAATTACTAAATCAAACAGAAGAAGAATTTGGTTATGATCATCCAATGGGGGGTCTCACAATTCCTTGCAGTGAAGATGCTTTCTTAGAACTCACTTCTCGCTTGAATTGA
Protein sequence	>MS.gene062987.t1 MGFRIASIIKRASSSKTQGSSKGYEVPKGYLAVYVGDQMRRFVIPVSYLNQPLFQELLNQTEEEFGYDHPMGGLTIPCSEDAFLELTSRLN