Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06900.t1 | XP_003602279.2 | 90.1 | 563 | 56 | 0 | 1 | 563 | 1 | 563 | 6.00E-139 | 504.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06900.t1 | G7J7G9 | 90.1 | 563 | 56 | 0 | 1 | 563 | 1 | 563 | 4.3e-139 | 504.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene06900 | 0.830639 | 2.62E-55 | -1.69E-46 |
| MS.gene049151 | MS.gene06900 | 0.809388 | 1.94E-50 | -1.69E-46 |
| MS.gene049153 | MS.gene06900 | 0.827592 | 1.44E-54 | -1.69E-46 |
| MS.gene049260 | MS.gene06900 | 0.808023 | 3.80E-50 | -1.69E-46 |
| MS.gene049297 | MS.gene06900 | 0.864834 | 9.14E-65 | -1.69E-46 |
| MS.gene04933 | MS.gene06900 | 0.812594 | 3.92E-51 | -1.69E-46 |
| MS.gene049346 | MS.gene06900 | 0.80596 | 1.04E-49 | -1.69E-46 |
| MS.gene049351 | MS.gene06900 | 0.836617 | 8.43E-57 | -1.69E-46 |
| MS.gene049758 | MS.gene06900 | 0.868819 | 4.92E-66 | -1.69E-46 |
| MS.gene049910 | MS.gene06900 | 0.834277 | 3.29E-56 | -1.69E-46 |
| MS.gene049915 | MS.gene06900 | 0.802529 | 5.37E-49 | -1.69E-46 |
| MS.gene050099 | MS.gene06900 | 0.845646 | 3.57E-59 | -1.69E-46 |
| MS.gene050168 | MS.gene06900 | 0.80729 | 5.43E-50 | -1.69E-46 |
| MS.gene050226 | MS.gene06900 | 0.82 | 8.64E-53 | -1.69E-46 |
| MS.gene050227 | MS.gene06900 | 0.829527 | 4.90E-55 | -1.69E-46 |
| MS.gene050228 | MS.gene06900 | 0.815911 | 7.25E-52 | -1.69E-46 |
| MS.gene050231 | MS.gene06900 | 0.805241 | 1.47E-49 | -1.69E-46 |
| MS.gene050301 | MS.gene06900 | 0.892396 | 1.65E-74 | -1.69E-46 |
| MS.gene050319 | MS.gene06900 | -0.81636 | 5.76E-52 | -1.69E-46 |
| MS.gene050330 | MS.gene06900 | -0.838209 | 3.29E-57 | -1.69E-46 |
| MS.gene050397 | MS.gene06900 | 0.819921 | 9.01E-53 | -1.69E-46 |
| MS.gene050464 | MS.gene06900 | 0.8097 | 1.66E-50 | -1.69E-46 |
| MS.gene050516 | MS.gene06900 | 0.806448 | 8.19E-50 | -1.69E-46 |
| MS.gene050529 | MS.gene06900 | 0.827111 | 1.87E-54 | -1.69E-46 |
| MS.gene050558 | MS.gene06900 | 0.883995 | 2.80E-71 | -1.69E-46 |
| MS.gene050560 | MS.gene06900 | 0.847875 | 8.77E-60 | -1.69E-46 |
| MS.gene050642 | MS.gene06900 | 0.844698 | 6.43E-59 | -1.69E-46 |
| MS.gene050650 | MS.gene06900 | 0.806202 | 9.22E-50 | -1.69E-46 |
| MS.gene050820 | MS.gene06900 | 0.852354 | 4.88E-61 | -1.69E-46 |
| MS.gene05101 | MS.gene06900 | 0.841591 | 4.33E-58 | -1.69E-46 |
| MS.gene05119 | MS.gene06900 | -0.810126 | 1.35E-50 | -1.69E-46 |
| MS.gene051240 | MS.gene06900 | 0.801567 | 8.47E-49 | -1.69E-46 |
| MS.gene051257 | MS.gene06900 | 0.805324 | 1.41E-49 | -1.69E-46 |
| MS.gene051471 | MS.gene06900 | 0.845008 | 5.31E-59 | -1.69E-46 |
| MS.gene051582 | MS.gene06900 | 0.827762 | 1.31E-54 | -1.69E-46 |
| MS.gene051662 | MS.gene06900 | 0.835237 | 1.89E-56 | -1.69E-46 |
| MS.gene051663 | MS.gene06900 | 0.864207 | 1.44E-64 | -1.69E-46 |
| MS.gene051860 | MS.gene06900 | 0.869221 | 3.64E-66 | -1.69E-46 |
| MS.gene051983 | MS.gene06900 | 0.838216 | 3.28E-57 | -1.69E-46 |
| MS.gene052011 | MS.gene06900 | -0.814765 | 1.30E-51 | -1.69E-46 |
| MS.gene052078 | MS.gene06900 | 0.836518 | 8.93E-57 | -1.69E-46 |
| MS.gene052178 | MS.gene06900 | 0.822776 | 1.98E-53 | -1.69E-46 |
| MS.gene052188 | MS.gene06900 | 0.831133 | 1.98E-55 | -1.69E-46 |
| MS.gene052207 | MS.gene06900 | 0.85097 | 1.20E-60 | -1.69E-46 |
| MS.gene052253 | MS.gene06900 | 0.844051 | 9.60E-59 | -1.69E-46 |
| MS.gene052255 | MS.gene06900 | 0.801173 | 1.02E-48 | -1.69E-46 |
| MS.gene052310 | MS.gene06900 | 0.823056 | 1.70E-53 | -1.69E-46 |
| MS.gene052326 | MS.gene06900 | 0.819048 | 1.43E-52 | -1.69E-46 |
| MS.gene052340 | MS.gene06900 | 0.819916 | 9.03E-53 | -1.69E-46 |
| MS.gene052600 | MS.gene06900 | 0.842156 | 3.07E-58 | -1.69E-46 |
| MS.gene053557 | MS.gene06900 | 0.81916 | 1.34E-52 | -1.69E-46 |
| MS.gene053836 | MS.gene06900 | 0.913823 | 3.93E-84 | -1.69E-46 |
| MS.gene053907 | MS.gene06900 | 0.832905 | 7.24E-56 | -1.69E-46 |
| MS.gene053971 | MS.gene06900 | 0.812377 | 4.37E-51 | -1.69E-46 |
| MS.gene054183 | MS.gene06900 | 0.808417 | 3.13E-50 | -1.69E-46 |
| MS.gene054473 | MS.gene06900 | 0.8486 | 5.53E-60 | -1.69E-46 |
| MS.gene05455 | MS.gene06900 | 0.861646 | 8.86E-64 | -1.69E-46 |
| MS.gene054667 | MS.gene06900 | 0.815172 | 1.06E-51 | -1.69E-46 |
| MS.gene054930 | MS.gene06900 | 0.822943 | 1.81E-53 | -1.69E-46 |
| MS.gene054942 | MS.gene06900 | 0.875709 | 2.49E-68 | -1.69E-46 |
| MS.gene054983 | MS.gene06900 | 0.858053 | 1.07E-62 | -1.69E-46 |
| MS.gene055277 | MS.gene06900 | 0.839448 | 1.58E-57 | -1.69E-46 |
| MS.gene055303 | MS.gene06900 | 0.822595 | 2.18E-53 | -1.69E-46 |
| MS.gene055390 | MS.gene06900 | 0.863454 | 2.46E-64 | -1.69E-46 |
| MS.gene055422 | MS.gene06900 | 0.885591 | 7.13E-72 | -1.69E-46 |
| MS.gene055428 | MS.gene06900 | 0.880391 | 5.70E-70 | -1.69E-46 |
| MS.gene05553 | MS.gene06900 | 0.812771 | 3.58E-51 | -1.69E-46 |
| MS.gene055604 | MS.gene06900 | 0.838483 | 2.80E-57 | -1.69E-46 |
| MS.gene055712 | MS.gene06900 | 0.808878 | 2.49E-50 | -1.69E-46 |
| MS.gene056407 | MS.gene06900 | 0.821097 | 4.84E-53 | -1.69E-46 |
| MS.gene056451 | MS.gene06900 | 0.823876 | 1.09E-53 | -1.69E-46 |
| MS.gene056612 | MS.gene06900 | 0.866674 | 2.40E-65 | -1.69E-46 |
| MS.gene056723 | MS.gene06900 | 0.824345 | 8.49E-54 | -1.69E-46 |
| MS.gene056846 | MS.gene06900 | 0.807417 | 5.11E-50 | -1.69E-46 |
| MS.gene056875 | MS.gene06900 | 0.801981 | 6.97E-49 | -1.69E-46 |
| MS.gene056979 | MS.gene06900 | 0.834319 | 3.21E-56 | -1.69E-46 |
| MS.gene05702 | MS.gene06900 | 0.832953 | 7.04E-56 | -1.69E-46 |
| MS.gene057121 | MS.gene06900 | 0.979822 | 8.06E-149 | -1.69E-46 |
| MS.gene057245 | MS.gene06900 | 0.873065 | 1.96E-67 | -1.69E-46 |
| MS.gene057260 | MS.gene06900 | 0.828389 | 9.24E-55 | -1.69E-46 |
| MS.gene057439 | MS.gene06900 | 0.842116 | 3.15E-58 | -1.69E-46 |
| MS.gene057469 | MS.gene06900 | 0.83117 | 1.94E-55 | -1.69E-46 |
| MS.gene058002 | MS.gene06900 | 0.894008 | 3.69E-75 | -1.69E-46 |
| MS.gene05811 | MS.gene06900 | 0.889396 | 2.51E-73 | -1.69E-46 |
| MS.gene058142 | MS.gene06900 | 0.875139 | 3.90E-68 | -1.69E-46 |
| MS.gene058233 | MS.gene06900 | 0.837503 | 5.00E-57 | -1.69E-46 |
| MS.gene058276 | MS.gene06900 | 0.854088 | 1.55E-61 | -1.69E-46 |
| MS.gene058660 | MS.gene06900 | 0.854814 | 9.58E-62 | -1.69E-46 |
| MS.gene058710 | MS.gene06900 | 0.820996 | 5.11E-53 | -1.69E-46 |
| MS.gene058736 | MS.gene06900 | 0.803016 | 4.26E-49 | -1.69E-46 |
| MS.gene058739 | MS.gene06900 | 0.821681 | 3.55E-53 | -1.69E-46 |
| MS.gene058749 | MS.gene06900 | 0.845286 | 4.47E-59 | -1.69E-46 |
| MS.gene058833 | MS.gene06900 | 0.842374 | 2.69E-58 | -1.69E-46 |
| MS.gene058845 | MS.gene06900 | 0.840269 | 9.63E-58 | -1.69E-46 |
| MS.gene05886 | MS.gene06900 | 0.826757 | 2.28E-54 | -1.69E-46 |
| MS.gene05907 | MS.gene06900 | 0.870191 | 1.76E-66 | -1.69E-46 |
| MS.gene059247 | MS.gene06900 | 0.807083 | 6.01E-50 | -1.69E-46 |
| MS.gene059342 | MS.gene06900 | 0.806181 | 9.32E-50 | -1.69E-46 |
| MS.gene059420 | MS.gene06900 | 0.801664 | 8.09E-49 | -1.69E-46 |
| MS.gene059518 | MS.gene06900 | 0.861422 | 1.04E-63 | -1.69E-46 |
| MS.gene059597 | MS.gene06900 | 0.822161 | 2.75E-53 | -1.69E-46 |
| MS.gene059692 | MS.gene06900 | 0.810275 | 1.25E-50 | -1.69E-46 |
| MS.gene059695 | MS.gene06900 | 0.811204 | 7.87E-51 | -1.69E-46 |
| MS.gene05984 | MS.gene06900 | 0.890106 | 1.33E-73 | -1.69E-46 |
| MS.gene059894 | MS.gene06900 | 0.835789 | 1.37E-56 | -1.69E-46 |
| MS.gene060407 | MS.gene06900 | 0.81612 | 6.51E-52 | -1.69E-46 |
| MS.gene060476 | MS.gene06900 | 0.818488 | 1.91E-52 | -1.69E-46 |
| MS.gene06090 | MS.gene06900 | 0.80008 | 1.70E-48 | -1.69E-46 |
| MS.gene060994 | MS.gene06900 | 0.834771 | 2.47E-56 | -1.69E-46 |
| MS.gene061000 | MS.gene06900 | 0.832459 | 9.34E-56 | -1.69E-46 |
| MS.gene061049 | MS.gene06900 | 0.857675 | 1.39E-62 | -1.69E-46 |
| MS.gene061114 | MS.gene06900 | -0.815147 | 1.07E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06900.t1 | MTR_3g091780 | 95.213 | 564 | 27 | 0 | 1 | 564 | 1 | 564 | 0.0 | 1055 |
| MS.gene06900.t1 | MTR_3g091780 | 96.256 | 454 | 17 | 0 | 111 | 564 | 1 | 454 | 0.0 | 889 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06900.t1 | AT5G53080 | 57.765 | 528 | 221 | 1 | 39 | 564 | 37 | 564 | 0.0 | 601 |
Find 110 sgRNAs with CRISPR-Local
Find 222 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACCCTCTTTCATTGGATTC+AGG | 0.207485 | 3.2:-77175636 | MS.gene06900:intron |
| ATGTGGTGCATCGTCCTTTA+AGG | 0.225818 | 3.2:+77174270 | None:intergenic |
| GCTGAATTACTCCATACTTC+TGG | 0.251548 | 3.2:-77173202 | MS.gene06900:CDS |
| ATCCTTTCTCTTGGATAATC+AGG | 0.268976 | 3.2:+77172473 | None:intergenic |
| GGAGAAAATGATGGAAGAAT+TGG | 0.269813 | 3.2:-77173525 | MS.gene06900:CDS |
| TACATTGTGGAGAGGATTTA+TGG | 0.277215 | 3.2:-77174160 | MS.gene06900:intron |
| CCAGCATGTAATCACTCTTT+TGG | 0.280025 | 3.2:-77173779 | MS.gene06900:CDS |
| TATTCTTGTTACACCTCATT+TGG | 0.294632 | 3.2:-77173857 | MS.gene06900:CDS |
| CGCATCCGTGAAAAGGCATT+TGG | 0.302103 | 3.2:-77172753 | MS.gene06900:CDS |
| AGAAGTTGTTGATACCTTAA+AGG | 0.303730 | 3.2:-77174284 | MS.gene06900:CDS |
| GTTCCATCACCCTCTTTCAT+TGG | 0.314733 | 3.2:-77175643 | MS.gene06900:CDS |
| GCAAAAGCTCTTGGTTCAAT+TGG | 0.329290 | 3.2:-77173829 | MS.gene06900:CDS |
| AACATATACACAAAAGTATA+TGG | 0.333209 | 3.2:-77173546 | MS.gene06900:CDS |
| ATTTGCATTAAGCAGGTCTA+TGG | 0.343466 | 3.2:+77175080 | None:intergenic |
| TTTATTCAAACGTGCTCTTA+AGG | 0.344816 | 3.2:-77173290 | MS.gene06900:CDS |
| AGATTCAATACTTATGCATA+TGG | 0.358609 | 3.2:-77174245 | MS.gene06900:CDS |
| CATATTAGCACTTGGTTACA+TGG | 0.361389 | 3.2:-77174992 | MS.gene06900:CDS |
| AAGCTTACCTCCCAGAAGTA+TGG | 0.367519 | 3.2:+77173191 | None:intergenic |
| CGGCTTAATGCTGGCACTAA+AGG | 0.370326 | 3.2:-77175039 | MS.gene06900:CDS |
| AAAATGACTTTCTGCATCAT+TGG | 0.373578 | 3.2:+77173675 | None:intergenic |
| ATTCTTGTTACACCTCATTT+GGG | 0.377310 | 3.2:-77173856 | MS.gene06900:CDS |
| CAGCAACTTTGAGAAAGAAT+TGG | 0.381841 | 3.2:-77175157 | MS.gene06900:CDS |
| ATGCATGTCAGGGGAGGCTT+TGG | 0.385246 | 3.2:-77172566 | MS.gene06900:intron |
| TGTTGGTTATCTGTTAAATT+CGG | 0.389764 | 3.2:-77174950 | MS.gene06900:intron |
| AAGATCTTTCGCGAAGTCAT+TGG | 0.390737 | 3.2:-77175341 | MS.gene06900:CDS |
| AGGTGCTGAAAGTAAGGATT+TGG | 0.391390 | 3.2:-77173746 | MS.gene06900:CDS |
| CTGAATTACTCCATACTTCT+GGG | 0.392390 | 3.2:-77173201 | MS.gene06900:CDS |
| GAAGCTAGAAATGGTCCTAA+TGG | 0.393809 | 3.2:+77175372 | None:intergenic |
| GTTGTACCTTTACTTAGTCT+TGG | 0.402641 | 3.2:-77173724 | MS.gene06900:CDS |
| TATCATGTGTGTTGCTAAGC+TGG | 0.404372 | 3.2:+77172971 | None:intergenic |
| ACTGTCATCTTTACCAAGTC+TGG | 0.409745 | 3.2:+77172522 | None:intergenic |
| GTATACTACTTAGATAAGTT+AGG | 0.422605 | 3.2:-77172406 | MS.gene06900:CDS |
| CATGTCCGAATCCTTTCTCT+TGG | 0.428885 | 3.2:+77172464 | None:intergenic |
| CACCTCTGATTATCTTCGTC+GGG | 0.429167 | 3.2:+77175268 | None:intergenic |
| GTCACCGGAGAACAGTATAA+TGG | 0.436670 | 3.2:-77173245 | MS.gene06900:CDS |
| TGTACCTCTCTGTAATCAAT+AGG | 0.440395 | 3.2:+77173009 | None:intergenic |
| TTTCATAATTTGCATTAAGC+AGG | 0.445985 | 3.2:+77175073 | None:intergenic |
| TTCGCGAAGTCATTGGAACT+TGG | 0.446451 | 3.2:-77175334 | MS.gene06900:CDS |
| AGAAGGAAGAGAGATATTAG+AGG | 0.448038 | 3.2:-77173036 | MS.gene06900:CDS |
| AAATAGAGGTGCTGAAAGTA+AGG | 0.452020 | 3.2:-77173752 | MS.gene06900:CDS |
| AAGCTAGAAATGGTCCTAAT+GGG | 0.455185 | 3.2:+77175373 | None:intergenic |
| GCACGGATAACCTTCTCTGC+AGG | 0.465290 | 3.2:+77172362 | None:intergenic |
| TTGGGTATGGCAAAAGCTCT+TGG | 0.466663 | 3.2:-77173838 | MS.gene06900:CDS |
| CACGGATGCGTAAAACCTCC+AGG | 0.470890 | 3.2:+77172766 | None:intergenic |
| TAGGAAGAAATATAAGCATA+TGG | 0.476228 | 3.2:-77172338 | MS.gene06900:CDS |
| AGAGGGTGATGGAACAAAAC+AGG | 0.480276 | 3.2:+77175651 | None:intergenic |
| TGTTACACCTCATTTGGGTA+TGG | 0.480427 | 3.2:-77173851 | MS.gene06900:CDS |
| TGAAATGCAGAAGCTAGAAA+TGG | 0.483695 | 3.2:+77175363 | None:intergenic |
| GTGAAAGAGCGGCTTAATGC+TGG | 0.485836 | 3.2:-77175048 | MS.gene06900:CDS |
| ATTATCCAAGAGAAAGGATT+CGG | 0.491963 | 3.2:-77172469 | MS.gene06900:CDS |
| AAAGAATTGGAGGAATTGTT+CGG | 0.497560 | 3.2:-77175144 | MS.gene06900:CDS |
| GTAGCTGCAAGTTGCAACAT+AGG | 0.503628 | 3.2:+77172831 | None:intergenic |
| TCATTGGAACTTGGAGGGAC+AGG | 0.505021 | 3.2:-77175325 | MS.gene06900:CDS |
| GATTCAATACTTATGCATAT+GGG | 0.505489 | 3.2:-77174244 | MS.gene06900:CDS |
| GCACTTGGTTACATGGCTGT+TGG | 0.509178 | 3.2:-77174985 | MS.gene06900:CDS |
| GCTTAATGCAAATTATGAAA+TGG | 0.511993 | 3.2:-77175070 | MS.gene06900:CDS |
| CTTATATTTCTTCCTAAGCA+CGG | 0.513677 | 3.2:+77172345 | None:intergenic |
| CAACTTTGAGAAAGAATTGG+AGG | 0.515276 | 3.2:-77175154 | MS.gene06900:CDS |
| AGAGAAGGTTATCCGTGCTT+AGG | 0.516989 | 3.2:-77172357 | MS.gene06900:CDS |
| GAACAAATTTGAAGACTCAC+TGG | 0.521362 | 3.2:-77174203 | MS.gene06900:CDS |
| GGAGATCATTCTCTTCCTGT+TGG | 0.521643 | 3.2:-77172732 | MS.gene06900:intron |
| AAAGTATATGGAGAAAATGA+TGG | 0.522288 | 3.2:-77173534 | MS.gene06900:CDS |
| GCTCAAGTGAAGTGTGCTCT+AGG | 0.526312 | 3.2:-77173483 | MS.gene06900:intron |
| ATCCTGATTATCCAAGAGAA+AGG | 0.530040 | 3.2:-77172475 | MS.gene06900:CDS |
| AAAAGCTTCCCCTGCAGAGA+AGG | 0.530458 | 3.2:-77172372 | MS.gene06900:CDS |
| ATCATGTGTGTTGCTAAGCT+GGG | 0.537536 | 3.2:+77172972 | None:intergenic |
| AGCTATACATTATACCCATT+AGG | 0.542016 | 3.2:-77175387 | MS.gene06900:CDS |
| GCGAAGTCATTGGAACTTGG+AGG | 0.542669 | 3.2:-77175331 | MS.gene06900:CDS |
| CTCACTGGACACATATCAAA+GGG | 0.542709 | 3.2:-77174188 | MS.gene06900:CDS |
| GTTGGAGACTTGAAGTATGT+TGG | 0.543920 | 3.2:-77174967 | MS.gene06900:CDS |
| CAGTATAATGGAAAAGATGA+GGG | 0.546450 | 3.2:-77173233 | MS.gene06900:CDS |
| TAGCTGCAAGTTGCAACATA+GGG | 0.546816 | 3.2:+77172832 | None:intergenic |
| GAACCTGAATCCAATGAAAG+AGG | 0.550486 | 3.2:+77175633 | None:intergenic |
| GTGTCTATTCAAGCCAGACT+TGG | 0.550978 | 3.2:-77172535 | MS.gene06900:CDS |
| ACAGTATAATGGAAAAGATG+AGG | 0.554987 | 3.2:-77173234 | MS.gene06900:CDS |
| CACGGATAACCTTCTCTGCA+GGG | 0.555081 | 3.2:+77172363 | None:intergenic |
| ATTCGGACATGAGAGTGAGC+AGG | 0.562524 | 3.2:-77172452 | MS.gene06900:CDS |
| AGAAGCAGAGAAACTCGCCC+TGG | 0.567980 | 3.2:-77172784 | MS.gene06900:CDS |
| CGAAGTCATTGGAACTTGGA+GGG | 0.570572 | 3.2:-77175330 | MS.gene06900:CDS |
| TACAGAGAGGTACAAAGGAA+AGG | 0.570695 | 3.2:-77173000 | MS.gene06900:CDS |
| ACATAGGGAAGCTGATGGAC+TGG | 0.571586 | 3.2:+77172847 | None:intergenic |
| ACGTGCTCTTAAGGTCATGA+AGG | 0.572087 | 3.2:-77173281 | MS.gene06900:CDS |
| CTTACTTCAAGAGGACAAGA+AGG | 0.574909 | 3.2:-77173053 | MS.gene06900:intron |
| CCAAAAGAGTGATTACATGC+TGG | 0.579083 | 3.2:+77173779 | None:intergenic |
| AAATGATGGAAGAATTGGAA+TGG | 0.582126 | 3.2:-77173520 | MS.gene06900:CDS |
| ACACCTCTGATTATCTTCGT+CGG | 0.583628 | 3.2:+77175267 | None:intergenic |
| CAAATCATGATAAAGCATAA+CGG | 0.586673 | 3.2:-77172879 | MS.gene06900:CDS |
| AATCCAATGAAAGAGGGTGA+TGG | 0.596105 | 3.2:+77175640 | None:intergenic |
| GGACTCAAATTACATGTCAC+CGG | 0.596445 | 3.2:-77173260 | MS.gene06900:CDS |
| TGCTGGCACTAAAGGCATAG+AGG | 0.599485 | 3.2:-77175031 | MS.gene06900:CDS |
| ACTCACTGGACACATATCAA+AGG | 0.601175 | 3.2:-77174189 | MS.gene06900:CDS |
| TTGCAACATAGGGAAGCTGA+TGG | 0.612312 | 3.2:+77172842 | None:intergenic |
| AACCTGAATCCAATGAAAGA+GGG | 0.613573 | 3.2:+77175634 | None:intergenic |
| TCAAAGGGCTGTCTACATTG+TGG | 0.614616 | 3.2:-77174173 | MS.gene06900:CDS |
| TCTTGCAATGAGAGAGCATG+TGG | 0.623593 | 3.2:+77175466 | None:intergenic |
| AGATTGCCAAGACTAAGTAA+AGG | 0.624430 | 3.2:+77173718 | None:intergenic |
| TTGATTACAGAGAGGTACAA+AGG | 0.629542 | 3.2:-77173005 | MS.gene06900:CDS |
| ATCTCGCAACTTCGTACACA+CGG | 0.633480 | 3.2:-77172947 | MS.gene06900:CDS |
| AGCAGAGAAACTCGCCCTGG+AGG | 0.648249 | 3.2:-77172781 | MS.gene06900:CDS |
| ACGGATAACCTTCTCTGCAG+GGG | 0.654802 | 3.2:+77172364 | None:intergenic |
| CTCCCGACGAAGATAATCAG+AGG | 0.658761 | 3.2:-77175270 | MS.gene06900:intron |
| ATTATGAAATGGTGAAAGAG+CGG | 0.664891 | 3.2:-77175059 | MS.gene06900:CDS |
| GGGCTGTCTACATTGTGGAG+AGG | 0.670249 | 3.2:-77174168 | MS.gene06900:CDS |
| ACGGATGCGTAAAACCTCCA+GGG | 0.672923 | 3.2:+77172767 | None:intergenic |
| GCATATGGGAAATATGTATG+CGG | 0.687958 | 3.2:-77174230 | MS.gene06900:CDS |
| TGGCACTAAAGGCATAGAGG+AGG | 0.696456 | 3.2:-77175028 | MS.gene06900:CDS |
| ATAAGTATTGAATCTAGATG+TGG | 0.709685 | 3.2:+77174253 | None:intergenic |
| ACGGTCAAAGAATTATGCAG+AGG | 0.715366 | 3.2:-77172928 | MS.gene06900:CDS |
| AATTACTCCATACTTCTGGG+AGG | 0.730279 | 3.2:-77173198 | MS.gene06900:intron |
| AGTGCCTATTGATTACAGAG+AGG | 0.754196 | 3.2:-77173013 | MS.gene06900:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAAAAAAAA+AGG | + | chr3.2:77174610-77174629 | None:intergenic | 0.0% |
| !!! | AGTAGTATACAATTTTTTTA+AGG | + | chr3.2:77175575-77175594 | None:intergenic | 15.0% |
| !!! | ATATACAATATATTTTTGCA+GGG | - | chr3.2:77174658-77174677 | MS.gene06900:intron | 15.0% |
| !!! | GTAGTATACAATTTTTTTAA+GGG | + | chr3.2:77175574-77175593 | None:intergenic | 15.0% |
| !!! | TTATTTATTGTTTTTCACTA+GGG | - | chr3.2:77174417-77174436 | MS.gene06900:intron | 15.0% |
| !! | ACTAATACACTAAATATTGA+AGG | + | chr3.2:77174371-77174390 | None:intergenic | 20.0% |
| !! | AGTGAAAAAAATGATTAAGA+TGG | - | chr3.2:77172873-77172892 | MS.gene06900:CDS | 20.0% |
| !! | ATTGAAGGAGAAAAAAAATT+AGG | + | chr3.2:77174356-77174375 | None:intergenic | 20.0% |
| !! | GTGAAAAAAATGATTAAGAT+GGG | - | chr3.2:77172874-77172893 | MS.gene06900:CDS | 20.0% |
| !!! | AACATATACACAAAAGTATA+TGG | - | chr3.2:77174445-77174464 | MS.gene06900:intron | 20.0% |
| !!! | CTTATTTATTGTTTTTCACT+AGG | - | chr3.2:77174416-77174435 | MS.gene06900:intron | 20.0% |
| !!! | GATATACAATATATTTTTGC+AGG | - | chr3.2:77174657-77174676 | MS.gene06900:intron | 20.0% |
| !!! | TTTTTGTACAATGAGAATAA+AGG | - | chr3.2:77173269-77173288 | MS.gene06900:CDS | 20.0% |
| ! | AAAGTATATGGAGAAAATGA+TGG | - | chr3.2:77174457-77174476 | MS.gene06900:intron | 25.0% |
| ! | AAATGTTGCAATAATGAGTT+TGG | + | chr3.2:77173547-77173566 | None:intergenic | 25.0% |
| ! | AACATGAAAAACATTGCTAA+CGG | + | chr3.2:77173870-77173889 | None:intergenic | 25.0% |
| ! | AAGAATTACAATGTGAATAC+CGG | + | chr3.2:77174094-77174113 | None:intergenic | 25.0% |
| ! | ACATATGGAATTTGAAAAGA+AGG | + | chr3.2:77172383-77172402 | None:intergenic | 25.0% |
| ! | ACTTAAGAATCCAGATTTAT+TGG | - | chr3.2:77173229-77173248 | MS.gene06900:CDS | 25.0% |
| ! | AGATTCAATACTTATGCATA+TGG | - | chr3.2:77173746-77173765 | MS.gene06900:CDS | 25.0% |
| ! | ATGTTATCTGTTCTTCTATT+AGG | - | chr3.2:77172487-77172506 | MS.gene06900:CDS | 25.0% |
| ! | ATTCTCATTGTACAAAAATC+TGG | + | chr3.2:77173267-77173286 | None:intergenic | 25.0% |
| ! | ATTGTATATTATGCATGTCA+GGG | - | chr3.2:77175415-77175434 | MS.gene06900:CDS | 25.0% |
| ! | CAAATCATGATAAAGCATAA+CGG | - | chr3.2:77175112-77175131 | MS.gene06900:CDS | 25.0% |
| ! | GATTCAATACTTATGCATAT+GGG | - | chr3.2:77173747-77173766 | MS.gene06900:CDS | 25.0% |
| ! | GATTTGACTGCATATATTAT+TGG | + | chr3.2:77173381-77173400 | None:intergenic | 25.0% |
| ! | GCTTAATGCAAATTATGAAA+TGG | - | chr3.2:77172921-77172940 | MS.gene06900:CDS | 25.0% |
| ! | GTATACTACTTAGATAAGTT+AGG | - | chr3.2:77175585-77175604 | MS.gene06900:intron | 25.0% |
| ! | GTTAAGCTTGAATGAATAAA+CGG | - | chr3.2:77173352-77173371 | MS.gene06900:intron | 25.0% |
| ! | TAAAGCAAGAGTAAAACATA+TGG | + | chr3.2:77172398-77172417 | None:intergenic | 25.0% |
| ! | TAGAACTATTATAAGCTTCA+GGG | + | chr3.2:77175319-77175338 | None:intergenic | 25.0% |
| ! | TAGGAAGAAATATAAGCATA+TGG | - | chr3.2:77175653-77175672 | MS.gene06900:CDS | 25.0% |
| !! | AATTGTTGTTAAAATGCATC+TGG | - | chr3.2:77173577-77173596 | MS.gene06900:intron | 25.0% |
| !! | CACATTGTAATTCTTCTTTT+AGG | - | chr3.2:77174099-77174118 | MS.gene06900:intron | 25.0% |
| !! | TGTTGGTTATCTGTTAAATT+CGG | - | chr3.2:77173041-77173060 | MS.gene06900:CDS | 25.0% |
| !! | TTTCATAATTTGCATTAAGC+AGG | + | chr3.2:77172921-77172940 | None:intergenic | 25.0% |
| !!! | AAATAATAACAAGAGTGCTA+TGG | + | chr3.2:77173954-77173973 | None:intergenic | 25.0% |
| !!! | ATAAGTATTGAATCTAGATG+TGG | + | chr3.2:77173741-77173760 | None:intergenic | 25.0% |
| !!! | ATTTACCGACATTTTTCAAT+TGG | - | chr3.2:77173970-77173989 | MS.gene06900:intron | 25.0% |
| !!! | CTTCTTCATCATTTTTCAAA+TGG | + | chr3.2:77175192-77175211 | None:intergenic | 25.0% |
| !!! | GATGCATTTTAACAACAATT+TGG | + | chr3.2:77173577-77173596 | None:intergenic | 25.0% |
| !!! | TGCTACATTTTTCAAAATTC+CGG | - | chr3.2:77174072-77174091 | MS.gene06900:intron | 25.0% |
| !!! | TGTAATTCTTCTTTTAGGTA+AGG | - | chr3.2:77174104-77174123 | MS.gene06900:intron | 25.0% |
| !!! | TTTACCGACATTTTTCAATT+GGG | - | chr3.2:77173971-77173990 | MS.gene06900:intron | 25.0% |
| !!! | TTTTTTGTGTTATCAAGCTT+AGG | - | chr3.2:77174626-77174645 | MS.gene06900:intron | 25.0% |
| AAAAAAGGAAAGAAAAACCC+AGG | + | chr3.2:77174596-77174615 | None:intergenic | 30.0% | |
| AAAAAGGAAAGAAAAACCCA+GGG | + | chr3.2:77174595-77174614 | None:intergenic | 30.0% | |
| AAAATGACTTTCTGCATCAT+TGG | + | chr3.2:77174319-77174338 | None:intergenic | 30.0% | |
| AAAGAATTGGAGGAATTGTT+CGG | - | chr3.2:77172847-77172866 | MS.gene06900:CDS | 30.0% | |
| AGAAGTTGTTGATACCTTAA+AGG | - | chr3.2:77173707-77173726 | MS.gene06900:CDS | 30.0% | |
| AGCTATACATTATACCCATT+AGG | - | chr3.2:77172604-77172623 | MS.gene06900:intron | 30.0% | |
| ATCAACAACTTCTTTCAACT+GGG | + | chr3.2:77173700-77173719 | None:intergenic | 30.0% | |
| ATGAACAACTATCAAGAGTT+GGG | + | chr3.2:77172430-77172449 | None:intergenic | 30.0% | |
| ATTATCCAAGAGAAAGGATT+CGG | - | chr3.2:77175522-77175541 | MS.gene06900:intron | 30.0% | |
| ATTATGAAATGGTGAAAGAG+CGG | - | chr3.2:77172932-77172951 | MS.gene06900:CDS | 30.0% | |
| ATTATTCAGATGATCCTGTT+TGG | - | chr3.2:77175346-77175365 | MS.gene06900:CDS | 30.0% | |
| ATTCTTGTTACACCTCATTT+GGG | - | chr3.2:77174135-77174154 | MS.gene06900:intron | 30.0% | |
| CAATCAATGTCAGTTTCATA+AGG | + | chr3.2:77175399-77175418 | None:intergenic | 30.0% | |
| CAGATTTATTGGATGATCAT+AGG | - | chr3.2:77173240-77173259 | MS.gene06900:CDS | 30.0% | |
| CTAGAACTATTATAAGCTTC+AGG | + | chr3.2:77175320-77175339 | None:intergenic | 30.0% | |
| CTAGGTAACTTCATAATTAC+CGG | - | chr3.2:77174526-77174545 | MS.gene06900:intron | 30.0% | |
| CTATGATCATCCAATAAATC+TGG | + | chr3.2:77173242-77173261 | None:intergenic | 30.0% | |
| CTTATATTTCTTCCTAAGCA+CGG | + | chr3.2:77175649-77175668 | None:intergenic | 30.0% | |
| GAAAATATGCTTGTAAGACA+AGG | + | chr3.2:77173413-77173432 | None:intergenic | 30.0% | |
| GATTGTATATTATGCATGTC+AGG | - | chr3.2:77175414-77175433 | MS.gene06900:CDS | 30.0% | |
| TACACAGATAATTTCCTCTA+AGG | + | chr3.2:77174046-77174065 | None:intergenic | 30.0% | |
| TATCAACAACTTCTTTCAAC+TGG | + | chr3.2:77173701-77173720 | None:intergenic | 30.0% | |
| TATGAACAACTATCAAGAGT+TGG | + | chr3.2:77172431-77172450 | None:intergenic | 30.0% | |
| TATTCTTGTTACACCTCATT+TGG | - | chr3.2:77174134-77174153 | MS.gene06900:intron | 30.0% | |
| TTCAACTAATTCATACCATG+CGG | + | chr3.2:77173138-77173157 | None:intergenic | 30.0% | |
| TTGACTGCATATATTATTGG+TGG | + | chr3.2:77173378-77173397 | None:intergenic | 30.0% | |
| TTGTACAATGAGAATAAAGG+AGG | - | chr3.2:77173272-77173291 | MS.gene06900:CDS | 30.0% | |
| TTGTATATTATGCATGTCAG+GGG | - | chr3.2:77175416-77175435 | MS.gene06900:CDS | 30.0% | |
| TTTATTCAAACGTGCTCTTA+AGG | - | chr3.2:77174701-77174720 | MS.gene06900:intron | 30.0% | |
| ! | AAATGATGGAAGAATTGGAA+TGG | - | chr3.2:77174471-77174490 | MS.gene06900:intron | 30.0% |
| ! | ACAGTATAATGGAAAAGATG+AGG | - | chr3.2:77174757-77174776 | MS.gene06900:intron | 30.0% |
| ! | AGCTTTATAAACTTGGTAGT+AGG | - | chr3.2:77174818-77174837 | MS.gene06900:intron | 30.0% |
| ! | AGTTTTCTTTGTATCTGTCT+TGG | - | chr3.2:77173508-77173527 | MS.gene06900:CDS | 30.0% |
| ! | CAGTATAATGGAAAAGATGA+GGG | - | chr3.2:77174758-77174777 | MS.gene06900:intron | 30.0% |
| ! | CTTTTGTTCTCTCTTCAAAT+GGG | - | chr3.2:77174556-77174575 | MS.gene06900:intron | 30.0% |
| ! | TTTTCACTCAATAAGAGAGT+GGG | - | chr3.2:77173899-77173918 | MS.gene06900:intron | 30.0% |
| ! | TTTTCCATTATACTGTTCTC+CGG | + | chr3.2:77174753-77174772 | None:intergenic | 30.0% |
| ! | TTTTGTTCTCTCTTCAAATG+GGG | - | chr3.2:77174557-77174576 | MS.gene06900:intron | 30.0% |
| !! | GTTTTAGACATATTAGCACT+TGG | - | chr3.2:77172991-77173010 | MS.gene06900:CDS | 30.0% |
| !!! | ACTCTTTTGGAATCAAATAG+AGG | - | chr3.2:77174225-77174244 | MS.gene06900:CDS | 30.0% |
| !!! | ATGCAGAAAGTCATTTTTCT+AGG | - | chr3.2:77174322-77174341 | MS.gene06900:intron | 30.0% |
| AACCTGAATCCAATGAAAGA+GGG | + | chr3.2:77172360-77172379 | None:intergenic | 35.0% | |
| AAGCTAGAAATGGTCCTAAT+GGG | + | chr3.2:77172621-77172640 | None:intergenic | 35.0% | |
| AGAAGGAAGAGAGATATTAG+AGG | - | chr3.2:77174955-77174974 | MS.gene06900:CDS | 35.0% | |
| AGATTGCCAAGACTAAGTAA+AGG | + | chr3.2:77174276-77174295 | None:intergenic | 35.0% | |
| AGCAAAAGATTAAGACCAAG+AGG | - | chr3.2:77174841-77174860 | MS.gene06900:intron | 35.0% | |
| ATCCTGATTATCCAAGAGAA+AGG | - | chr3.2:77175516-77175535 | MS.gene06900:intron | 35.0% | |
| ATCCTTTCTCTTGGATAATC+AGG | + | chr3.2:77175521-77175540 | None:intergenic | 35.0% | |
| ATGTAACTCAACACTTACTG+TGG | - | chr3.2:77174905-77174924 | MS.gene06900:intron | 35.0% | |
| ATTTGCATTAAGCAGGTCTA+TGG | + | chr3.2:77172914-77172933 | None:intergenic | 35.0% | |
| CATATTAGCACTTGGTTACA+TGG | - | chr3.2:77172999-77173018 | MS.gene06900:CDS | 35.0% | |
| CTGAATTACTCCATACTTCT+GGG | - | chr3.2:77174790-77174809 | MS.gene06900:intron | 35.0% | |
| GAACAAATTTGAAGACTCAC+TGG | - | chr3.2:77173788-77173807 | MS.gene06900:CDS | 35.0% | |
| GCATATGGGAAATATGTATG+CGG | - | chr3.2:77173761-77173780 | MS.gene06900:CDS | 35.0% | |
| GTATGTGAATGAAACCAAAC+AGG | + | chr3.2:77175363-77175382 | None:intergenic | 35.0% | |
| GTTGTACCTTTACTTAGTCT+TGG | - | chr3.2:77174267-77174286 | MS.gene06900:CDS | 35.0% | |
| TACATTGTGGAGAGGATTTA+TGG | - | chr3.2:77173831-77173850 | MS.gene06900:CDS | 35.0% | |
| TGAAATGCAGAAGCTAGAAA+TGG | + | chr3.2:77172631-77172650 | None:intergenic | 35.0% | |
| TGTACCTCTCTGTAATCAAT+AGG | + | chr3.2:77174985-77175004 | None:intergenic | 35.0% | |
| TGTGCCCAATTGAAAAATGT+CGG | + | chr3.2:77173978-77173997 | None:intergenic | 35.0% | |
| TTTCTAGACAGATACCTTAG+AGG | - | chr3.2:77174029-77174048 | MS.gene06900:intron | 35.0% | |
| ! | ACTGAAGAGTATACAAGAGA+AGG | + | chr3.2:77173083-77173102 | None:intergenic | 35.0% |
| ! | AGATAATCAGAGGTGTGAAT+TGG | - | chr3.2:77172731-77172750 | MS.gene06900:intron | 35.0% |
| ! | CAACTTTGAGAAAGAATTGG+AGG | - | chr3.2:77172837-77172856 | MS.gene06900:CDS | 35.0% |
| ! | CAGCAACTTTGAGAAAGAAT+TGG | - | chr3.2:77172834-77172853 | MS.gene06900:CDS | 35.0% |
| ! | CTAAGGTATCTGTCTAGAAA+TGG | + | chr3.2:77174029-77174048 | None:intergenic | 35.0% |
| ! | CTGAAGAGTATACAAGAGAA+GGG | + | chr3.2:77173082-77173101 | None:intergenic | 35.0% |
| ! | GCTTTTGTTCTCTCTTCAAA+TGG | - | chr3.2:77174555-77174574 | MS.gene06900:intron | 35.0% |
| ! | GGAGAAAATGATGGAAGAAT+TGG | - | chr3.2:77174466-77174485 | MS.gene06900:intron | 35.0% |
| ! | GGAGGTAAGCTTTATAAACT+TGG | - | chr3.2:77174811-77174830 | MS.gene06900:intron | 35.0% |
| ! | GTTTTCACTCAATAAGAGAG+TGG | - | chr3.2:77173898-77173917 | MS.gene06900:intron | 35.0% |
| ! | TTGATTACAGAGAGGTACAA+AGG | - | chr3.2:77174986-77175005 | MS.gene06900:CDS | 35.0% |
| !! | AAATAGAGGTGCTGAAAGTA+AGG | - | chr3.2:77174239-77174258 | MS.gene06900:CDS | 35.0% |
| AACAACTATCAAGAGTTGGG+TGG | + | chr3.2:77172427-77172446 | None:intergenic | 40.0% | |
| AAGAGGAGTAAGAACACAGT+AGG | - | chr3.2:77174858-77174877 | MS.gene06900:intron | 40.0% | |
| AAGATCTTTCGCGAAGTCAT+TGG | - | chr3.2:77172650-77172669 | MS.gene06900:intron | 40.0% | |
| AATCCAATGAAAGAGGGTGA+TGG | + | chr3.2:77172354-77172373 | None:intergenic | 40.0% | |
| AATCCACACCATAGAGAAAG+TGG | + | chr3.2:77173659-77173678 | None:intergenic | 40.0% | |
| AATTACTCCATACTTCTGGG+AGG | - | chr3.2:77174793-77174812 | MS.gene06900:intron | 40.0% | |
| ACACCTCTGATTATCTTCGT+CGG | + | chr3.2:77172727-77172746 | None:intergenic | 40.0% | |
| ACGGTCAAAGAATTATGCAG+AGG | - | chr3.2:77175063-77175082 | MS.gene06900:CDS | 40.0% | |
| ACTCACTGGACACATATCAA+AGG | - | chr3.2:77173802-77173821 | MS.gene06900:CDS | 40.0% | |
| ACTGTCATCTTTACCAAGTC+TGG | + | chr3.2:77175472-77175491 | None:intergenic | 40.0% | |
| ATAAAGGAGGAGTCAGTTGT+TGG | - | chr3.2:77173285-77173304 | MS.gene06900:CDS | 40.0% | |
| ATGCTGATAGAAAGATAGCG+TGG | + | chr3.2:77173460-77173479 | None:intergenic | 40.0% | |
| CAATAAGAGAGTGGGTGTTA+GGG | - | chr3.2:77173907-77173926 | MS.gene06900:intron | 40.0% | |
| CATCACATCTTTGACTCTCT+TGG | - | chr3.2:77173477-77173496 | MS.gene06900:intron | 40.0% | |
| CCAAAAGAGTGATTACATGC+TGG | + | chr3.2:77174215-77174234 | None:intergenic | 40.0% | |
| CTCACTGGACACATATCAAA+GGG | - | chr3.2:77173803-77173822 | MS.gene06900:CDS | 40.0% | |
| CTTACTTCAAGAGGACAAGA+AGG | - | chr3.2:77174938-77174957 | MS.gene06900:intron | 40.0% | |
| CTTCTTGTCCTCTTGAAGTA+AGG | + | chr3.2:77174940-77174959 | None:intergenic | 40.0% | |
| GAACCTGAATCCAATGAAAG+AGG | + | chr3.2:77172361-77172380 | None:intergenic | 40.0% | |
| GAAGCTAGAAATGGTCCTAA+TGG | + | chr3.2:77172622-77172641 | None:intergenic | 40.0% | |
| GAGAGAACAACAACAGAAAG+TGG | + | chr3.2:77173615-77173634 | None:intergenic | 40.0% | |
| GCAAAAGCTCTTGGTTCAAT+TGG | - | chr3.2:77174162-77174181 | MS.gene06900:CDS | 40.0% | |
| GCTGAATTACTCCATACTTC+TGG | - | chr3.2:77174789-77174808 | MS.gene06900:intron | 40.0% | |
| GGACTCAAATTACATGTCAC+CGG | - | chr3.2:77174731-77174750 | MS.gene06900:intron | 40.0% | |
| GTTGGAGACTTGAAGTATGT+TGG | - | chr3.2:77173024-77173043 | MS.gene06900:CDS | 40.0% | |
| TACTGTGTTCTTACTCCTCT+TGG | + | chr3.2:77174859-77174878 | None:intergenic | 40.0% | |
| TAGCTGCAAGTTGCAACATA+GGG | + | chr3.2:77175162-77175181 | None:intergenic | 40.0% | |
| TATATTATGCATGTCAGGGG+AGG | - | chr3.2:77175419-77175438 | MS.gene06900:CDS | 40.0% | |
| TCAATAAGAGAGTGGGTGTT+AGG | - | chr3.2:77173906-77173925 | MS.gene06900:intron | 40.0% | |
| TCCTATTGCCTTACTTCAAG+AGG | - | chr3.2:77174929-77174948 | MS.gene06900:intron | 40.0% | |
| TCCTCTTGAAGTAAGGCAAT+AGG | + | chr3.2:77174933-77174952 | None:intergenic | 40.0% | |
| TGCAGAATTTGCAGAGTCAA+CGG | + | chr3.2:77172803-77172822 | None:intergenic | 40.0% | |
| TGCTGATAGAAAGATAGCGT+GGG | + | chr3.2:77173459-77173478 | None:intergenic | 40.0% | |
| TGTTACACCTCATTTGGGTA+TGG | - | chr3.2:77174140-77174159 | MS.gene06900:intron | 40.0% | |
| ! | AAGAGTATACAAGAGAAGGG+TGG | + | chr3.2:77173079-77173098 | None:intergenic | 40.0% |
| ! | AGTGCCTATTGATTACAGAG+AGG | - | chr3.2:77174978-77174997 | MS.gene06900:CDS | 40.0% |
| ! | ATCATGTGTGTTGCTAAGCT+GGG | + | chr3.2:77175022-77175041 | None:intergenic | 40.0% |
| ! | CCAGCATGTAATCACTCTTT+TGG | - | chr3.2:77174212-77174231 | MS.gene06900:CDS | 40.0% |
| ! | GAGAAGGGAATTTTACCAAC+AGG | + | chr3.2:77175277-77175296 | None:intergenic | 40.0% |
| ! | GATCTCCAAATGCCTTTTCA+CGG | + | chr3.2:77175246-77175265 | None:intergenic | 40.0% |
| ! | TACAGAGAGGTACAAAGGAA+AGG | - | chr3.2:77174991-77175010 | MS.gene06900:CDS | 40.0% |
| ! | TATCATGTGTGTTGCTAAGC+TGG | + | chr3.2:77175023-77175042 | None:intergenic | 40.0% |
| !! | AGAGAACAAAAGCATCACTC+CGG | + | chr3.2:77174548-77174567 | None:intergenic | 40.0% |
| !! | AGGTGCTGAAAGTAAGGATT+TGG | - | chr3.2:77174245-77174264 | MS.gene06900:CDS | 40.0% |
| AAGCTTACCTCCCAGAAGTA+TGG | + | chr3.2:77174803-77174822 | None:intergenic | 45.0% | |
| ACCATAGAGAAAGTGGAGTG+AGG | + | chr3.2:77173652-77173671 | None:intergenic | 45.0% | |
| ACGTGCTCTTAAGGTCATGA+AGG | - | chr3.2:77174710-77174729 | MS.gene06900:intron | 45.0% | |
| ACTCCACTTTCTCTATGGTG+TGG | - | chr3.2:77173653-77173672 | MS.gene06900:intron | 45.0% | |
| AGAGAAGGTTATCCGTGCTT+AGG | - | chr3.2:77175634-77175653 | MS.gene06900:intron | 45.0% | |
| AGTATACAAGAGAAGGGTGG+AGG | + | chr3.2:77173076-77173095 | None:intergenic | 45.0% | |
| ATCTCGCAACTTCGTACACA+CGG | - | chr3.2:77175044-77175063 | MS.gene06900:CDS | 45.0% | |
| ATGTGGTGCATCGTCCTTTA+AGG | + | chr3.2:77173724-77173743 | None:intergenic | 45.0% | |
| CACCCTCTTTCATTGGATTC+AGG | - | chr3.2:77172355-77172374 | MS.gene06900:CDS | 45.0% | |
| CACCTCTGATTATCTTCGTC+GGG | + | chr3.2:77172726-77172745 | None:intergenic | 45.0% | |
| CATGTCCGAATCCTTTCTCT+TGG | + | chr3.2:77175530-77175549 | None:intergenic | 45.0% | |
| CGAAGTCATTGGAACTTGGA+GGG | - | chr3.2:77172661-77172680 | MS.gene06900:intron | 45.0% | |
| GGAGATCATTCTCTTCCTGT+TGG | - | chr3.2:77175259-77175278 | MS.gene06900:intron | 45.0% | |
| GTAGCTGCAAGTTGCAACAT+AGG | + | chr3.2:77175163-77175182 | None:intergenic | 45.0% | |
| GTCACCGGAGAACAGTATAA+TGG | - | chr3.2:77174746-77174765 | MS.gene06900:intron | 45.0% | |
| GTGTCTATTCAAGCCAGACT+TGG | - | chr3.2:77175456-77175475 | MS.gene06900:CDS | 45.0% | |
| GTTCCATCACCCTCTTTCAT+TGG | - | chr3.2:77172348-77172367 | MS.gene06900:CDS | 45.0% | |
| TCAAAGGGCTGTCTACATTG+TGG | - | chr3.2:77173818-77173837 | MS.gene06900:CDS | 45.0% | |
| TCTCAAAGTTGCTGCATCAG+TGG | + | chr3.2:77172828-77172847 | None:intergenic | 45.0% | |
| TGATAGAAAGATAGCGTGGG+TGG | + | chr3.2:77173456-77173475 | None:intergenic | 45.0% | |
| TTCAAATGGGGTCCAAGTAC+AGG | - | chr3.2:77174569-77174588 | MS.gene06900:intron | 45.0% | |
| TTCGCGAAGTCATTGGAACT+TGG | - | chr3.2:77172657-77172676 | MS.gene06900:intron | 45.0% | |
| TTGCAACATAGGGAAGCTGA+TGG | + | chr3.2:77175152-77175171 | None:intergenic | 45.0% | |
| TTGGGTATGGCAAAAGCTCT+TGG | - | chr3.2:77174153-77174172 | MS.gene06900:intron | 45.0% | |
| ! | CATGTTTTCACGGAGGAGAA+GGG | + | chr3.2:77175292-77175311 | None:intergenic | 45.0% |
| ! | GATTTCTTGTTGTGTCCGCA+TGG | - | chr3.2:77173120-77173139 | MS.gene06900:intron | 45.0% |
| ! | GCTTTTGCCATACCCAAATG+AGG | + | chr3.2:77174150-77174169 | None:intergenic | 45.0% |
| ! | GGTTTTACGCATCCGTGAAA+AGG | - | chr3.2:77175231-77175250 | MS.gene06900:intron | 45.0% |
| ! | TCAGGGTGACCATGTTTTCA+CGG | + | chr3.2:77175302-77175321 | None:intergenic | 45.0% |
| ! | TCTTGCAATGAGAGAGCATG+TGG | + | chr3.2:77172528-77172547 | None:intergenic | 45.0% |
| !! | AGAGGGTGATGGAACAAAAC+AGG | + | chr3.2:77172343-77172362 | None:intergenic | 45.0% |
| AAAAACCCAGGGCCTGTACT+TGG | + | chr3.2:77174584-77174603 | None:intergenic | 50.0% | |
| AAAAGCTTCCCCTGCAGAGA+AGG | - | chr3.2:77175619-77175638 | MS.gene06900:intron | 50.0% | |
| ACGGATAACCTTCTCTGCAG+GGG | + | chr3.2:77175630-77175649 | None:intergenic | 50.0% | |
| ACGGATGCGTAAAACCTCCA+GGG | + | chr3.2:77175227-77175246 | None:intergenic | 50.0% | |
| ATTCGGACATGAGAGTGAGC+AGG | - | chr3.2:77175539-77175558 | MS.gene06900:intron | 50.0% | |
| CACGGATAACCTTCTCTGCA+GGG | + | chr3.2:77175631-77175650 | None:intergenic | 50.0% | |
| CCTTCTCCTCCGTGAAAACA+TGG | - | chr3.2:77175290-77175309 | MS.gene06900:CDS | 50.0% | |
| CGGCTTAATGCTGGCACTAA+AGG | - | chr3.2:77172952-77172971 | MS.gene06900:CDS | 50.0% | |
| CTCCCGACGAAGATAATCAG+AGG | - | chr3.2:77172721-77172740 | MS.gene06900:intron | 50.0% | |
| GCACTTGGTTACATGGCTGT+TGG | - | chr3.2:77173006-77173025 | MS.gene06900:CDS | 50.0% | |
| GCCTCACTCCACTTTCTCTA+TGG | - | chr3.2:77173648-77173667 | MS.gene06900:intron | 50.0% | |
| GCGAAGTCATTGGAACTTGG+AGG | - | chr3.2:77172660-77172679 | MS.gene06900:intron | 50.0% | |
| GCTCAAGTGAAGTGTGCTCT+AGG | - | chr3.2:77174508-77174527 | MS.gene06900:intron | 50.0% | |
| GTGAAAGAGCGGCTTAATGC+TGG | - | chr3.2:77172943-77172962 | MS.gene06900:CDS | 50.0% | |
| TCATTGGAACTTGGAGGGAC+AGG | - | chr3.2:77172666-77172685 | MS.gene06900:intron | 50.0% | |
| ! | ACATAGGGAAGCTGATGGAC+TGG | + | chr3.2:77175147-77175166 | None:intergenic | 50.0% |
| ! | CCATGTTTTCACGGAGGAGA+AGG | + | chr3.2:77175293-77175312 | None:intergenic | 50.0% |
| ! | TGCTGGCACTAAAGGCATAG+AGG | - | chr3.2:77172960-77172979 | MS.gene06900:CDS | 50.0% |
| ! | TGGCACTAAAGGCATAGAGG+AGG | - | chr3.2:77172963-77172982 | MS.gene06900:CDS | 50.0% |
| !! | CGCATCCGTGAAAAGGCATT+TGG | - | chr3.2:77175238-77175257 | MS.gene06900:intron | 50.0% |
| AGAAGCAGAGAAACTCGCCC+TGG | - | chr3.2:77175207-77175226 | MS.gene06900:intron | 55.0% | |
| ATGCATGTCAGGGGAGGCTT+TGG | - | chr3.2:77175425-77175444 | MS.gene06900:CDS | 55.0% | |
| CACGGATGCGTAAAACCTCC+AGG | + | chr3.2:77175228-77175247 | None:intergenic | 55.0% | |
| GCACGGATAACCTTCTCTGC+AGG | + | chr3.2:77175632-77175651 | None:intergenic | 55.0% | |
| GGGCTGTCTACATTGTGGAG+AGG | - | chr3.2:77173823-77173842 | MS.gene06900:CDS | 55.0% | |
| ! | GGGTGACCATGTTTTCACGG+AGG | + | chr3.2:77175299-77175318 | None:intergenic | 55.0% |
| AGCAGAGAAACTCGCCCTGG+AGG | - | chr3.2:77175210-77175229 | MS.gene06900:intron | 60.0% | |
| GGGGTCCAAGTACAGGCCCT+GGG | - | chr3.2:77174576-77174595 | MS.gene06900:intron | 65.0% | |
| TGGGGTCCAAGTACAGGCCC+TGG | - | chr3.2:77174575-77174594 | MS.gene06900:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 77172327 | 77175686 | 77172327 | ID=MS.gene06900 |
| chr3.2 | mRNA | 77172327 | 77175686 | 77172327 | ID=MS.gene06900.t1;Parent=MS.gene06900 |
| chr3.2 | exon | 77175637 | 77175686 | 77175637 | ID=MS.gene06900.t1.exon1;Parent=MS.gene06900.t1 |
| chr3.2 | CDS | 77175637 | 77175686 | 77175637 | ID=cds.MS.gene06900.t1;Parent=MS.gene06900.t1 |
| chr3.2 | exon | 77175271 | 77175504 | 77175271 | ID=MS.gene06900.t1.exon2;Parent=MS.gene06900.t1 |
| chr3.2 | CDS | 77175271 | 77175504 | 77175271 | ID=cds.MS.gene06900.t1;Parent=MS.gene06900.t1 |
| chr3.2 | exon | 77174951 | 77175176 | 77174951 | ID=MS.gene06900.t1.exon3;Parent=MS.gene06900.t1 |
| chr3.2 | CDS | 77174951 | 77175176 | 77174951 | ID=cds.MS.gene06900.t1;Parent=MS.gene06900.t1 |
| chr3.2 | exon | 77174161 | 77174311 | 77174161 | ID=MS.gene06900.t1.exon4;Parent=MS.gene06900.t1 |
| chr3.2 | CDS | 77174161 | 77174311 | 77174161 | ID=cds.MS.gene06900.t1;Parent=MS.gene06900.t1 |
| chr3.2 | exon | 77173670 | 77173892 | 77173670 | ID=MS.gene06900.t1.exon5;Parent=MS.gene06900.t1 |
| chr3.2 | CDS | 77173670 | 77173892 | 77173670 | ID=cds.MS.gene06900.t1;Parent=MS.gene06900.t1 |
| chr3.2 | exon | 77173484 | 77173575 | 77173484 | ID=MS.gene06900.t1.exon6;Parent=MS.gene06900.t1 |
| chr3.2 | CDS | 77173484 | 77173575 | 77173484 | ID=cds.MS.gene06900.t1;Parent=MS.gene06900.t1 |
| chr3.2 | exon | 77173199 | 77173334 | 77173199 | ID=MS.gene06900.t1.exon7;Parent=MS.gene06900.t1 |
| chr3.2 | CDS | 77173199 | 77173334 | 77173199 | ID=cds.MS.gene06900.t1;Parent=MS.gene06900.t1 |
| chr3.2 | exon | 77172733 | 77173064 | 77172733 | ID=MS.gene06900.t1.exon8;Parent=MS.gene06900.t1 |
| chr3.2 | CDS | 77172733 | 77173064 | 77172733 | ID=cds.MS.gene06900.t1;Parent=MS.gene06900.t1 |
| chr3.2 | exon | 77172327 | 77172577 | 77172327 | ID=MS.gene06900.t1.exon9;Parent=MS.gene06900.t1 |
| chr3.2 | CDS | 77172327 | 77172577 | 77172327 | ID=cds.MS.gene06900.t1;Parent=MS.gene06900.t1 |
| Gene Sequence |
| Protein sequence |
