Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20109.t1 | XP_013441979.1 | 92.7 | 150 | 11 | 0 | 1 | 150 | 1 | 150 | 5.00E-77 | 297 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20109.t1 | O22150 | 48.7 | 154 | 69 | 4 | 1 | 147 | 1 | 151 | 9.1e-35 | 147.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20109.t1 | G7J151 | 92.7 | 150 | 11 | 0 | 1 | 150 | 1 | 150 | 3.6e-77 | 297.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene20109 | 0.814068 | 1.86E-51 | -1.69E-46 |
| MS.gene049222 | MS.gene20109 | 0.811747 | 6.00E-51 | -1.69E-46 |
| MS.gene049232 | MS.gene20109 | 0.811451 | 6.96E-51 | -1.69E-46 |
| MS.gene049285 | MS.gene20109 | 0.818975 | 1.48E-52 | -1.69E-46 |
| MS.gene049320 | MS.gene20109 | 0.817797 | 2.74E-52 | -1.69E-46 |
| MS.gene049396 | MS.gene20109 | 0.851552 | 8.24E-61 | -1.69E-46 |
| MS.gene049609 | MS.gene20109 | 0.817699 | 2.88E-52 | -1.69E-46 |
| MS.gene049633 | MS.gene20109 | 0.836188 | 1.08E-56 | -1.69E-46 |
| MS.gene05010 | MS.gene20109 | 0.807724 | 4.40E-50 | -1.69E-46 |
| MS.gene050170 | MS.gene20109 | 0.861109 | 1.29E-63 | -1.69E-46 |
| MS.gene050323 | MS.gene20109 | 0.863528 | 2.33E-64 | -1.69E-46 |
| MS.gene050375 | MS.gene20109 | 0.800622 | 1.32E-48 | -1.69E-46 |
| MS.gene050444 | MS.gene20109 | 0.83463 | 2.68E-56 | -1.69E-46 |
| MS.gene050496 | MS.gene20109 | 0.847197 | 1.35E-59 | -1.69E-46 |
| MS.gene050504 | MS.gene20109 | 0.810518 | 1.11E-50 | -1.69E-46 |
| MS.gene050577 | MS.gene20109 | 0.808382 | 3.18E-50 | -1.69E-46 |
| MS.gene050612 | MS.gene20109 | 0.812513 | 4.08E-51 | -1.69E-46 |
| MS.gene050675 | MS.gene20109 | 0.814635 | 1.39E-51 | -1.69E-46 |
| MS.gene050697 | MS.gene20109 | 0.839872 | 1.22E-57 | -1.69E-46 |
| MS.gene050699 | MS.gene20109 | 0.801094 | 1.06E-48 | -1.69E-46 |
| MS.gene050772 | MS.gene20109 | 0.826967 | 2.03E-54 | -1.69E-46 |
| MS.gene05080 | MS.gene20109 | 0.836973 | 6.83E-57 | -1.69E-46 |
| MS.gene05081 | MS.gene20109 | 0.814381 | 1.59E-51 | -1.69E-46 |
| MS.gene050868 | MS.gene20109 | 0.867162 | 1.68E-65 | -1.69E-46 |
| MS.gene050871 | MS.gene20109 | 0.869535 | 2.88E-66 | -1.69E-46 |
| MS.gene051268 | MS.gene20109 | 0.823062 | 1.70E-53 | -1.69E-46 |
| MS.gene051439 | MS.gene20109 | -0.812506 | 4.10E-51 | -1.69E-46 |
| MS.gene051651 | MS.gene20109 | -0.80733 | 5.33E-50 | -1.69E-46 |
| MS.gene051838 | MS.gene20109 | 0.839948 | 1.17E-57 | -1.69E-46 |
| MS.gene051874 | MS.gene20109 | 0.834105 | 3.63E-56 | -1.69E-46 |
| MS.gene051941 | MS.gene20109 | 0.820531 | 6.53E-53 | -1.69E-46 |
| MS.gene052318 | MS.gene20109 | 0.801726 | 7.86E-49 | -1.69E-46 |
| MS.gene052482 | MS.gene20109 | 0.804752 | 1.86E-49 | -1.69E-46 |
| MS.gene052486 | MS.gene20109 | 0.809226 | 2.10E-50 | -1.69E-46 |
| MS.gene052503 | MS.gene20109 | 0.835935 | 1.26E-56 | -1.69E-46 |
| MS.gene052506 | MS.gene20109 | 0.80742 | 5.10E-50 | -1.69E-46 |
| MS.gene052615 | MS.gene20109 | 0.813744 | 2.19E-51 | -1.69E-46 |
| MS.gene052822 | MS.gene20109 | 0.817174 | 3.78E-52 | -1.69E-46 |
| MS.gene052823 | MS.gene20109 | 0.837353 | 5.46E-57 | -1.69E-46 |
| MS.gene052825 | MS.gene20109 | 0.828547 | 8.46E-55 | -1.69E-46 |
| MS.gene052870 | MS.gene20109 | 0.837248 | 5.81E-57 | -1.69E-46 |
| MS.gene052872 | MS.gene20109 | 0.853811 | 1.87E-61 | -1.69E-46 |
| MS.gene053449 | MS.gene20109 | 0.814513 | 1.48E-51 | -1.69E-46 |
| MS.gene053479 | MS.gene20109 | 0.866973 | 1.93E-65 | -1.69E-46 |
| MS.gene053480 | MS.gene20109 | 0.876768 | 1.07E-68 | -1.69E-46 |
| MS.gene053574 | MS.gene20109 | 0.819951 | 8.87E-53 | -1.69E-46 |
| MS.gene053626 | MS.gene20109 | 0.816184 | 6.30E-52 | -1.69E-46 |
| MS.gene053632 | MS.gene20109 | 0.803134 | 4.03E-49 | -1.69E-46 |
| MS.gene053824 | MS.gene20109 | 0.876856 | 1.00E-68 | -1.69E-46 |
| MS.gene053912 | MS.gene20109 | 0.80435 | 2.25E-49 | -1.69E-46 |
| MS.gene053916 | MS.gene20109 | 0.843543 | 1.31E-58 | -1.69E-46 |
| MS.gene054003 | MS.gene20109 | 0.83285 | 7.47E-56 | -1.69E-46 |
| MS.gene054344 | MS.gene20109 | 0.807233 | 5.59E-50 | -1.69E-46 |
| MS.gene054595 | MS.gene20109 | 0.816218 | 6.19E-52 | -1.69E-46 |
| MS.gene054706 | MS.gene20109 | -0.802204 | 6.27E-49 | -1.69E-46 |
| MS.gene05470 | MS.gene20109 | 0.818041 | 2.41E-52 | -1.69E-46 |
| MS.gene05494 | MS.gene20109 | 0.864757 | 9.67E-65 | -1.69E-46 |
| MS.gene054954 | MS.gene20109 | 0.820354 | 7.17E-53 | -1.69E-46 |
| MS.gene05505 | MS.gene20109 | 0.818551 | 1.85E-52 | -1.69E-46 |
| MS.gene055206 | MS.gene20109 | 0.803359 | 3.62E-49 | -1.69E-46 |
| MS.gene055224 | MS.gene20109 | 0.824745 | 6.83E-54 | -1.69E-46 |
| MS.gene055362 | MS.gene20109 | 0.802795 | 4.74E-49 | -1.69E-46 |
| MS.gene055502 | MS.gene20109 | 0.833087 | 6.52E-56 | -1.69E-46 |
| MS.gene055577 | MS.gene20109 | 0.811753 | 5.98E-51 | -1.69E-46 |
| MS.gene055722 | MS.gene20109 | 0.800764 | 1.24E-48 | -1.69E-46 |
| MS.gene055741 | MS.gene20109 | 0.803507 | 3.37E-49 | -1.69E-46 |
| MS.gene055750 | MS.gene20109 | 0.832205 | 1.08E-55 | -1.69E-46 |
| MS.gene055751 | MS.gene20109 | 0.812513 | 4.08E-51 | -1.69E-46 |
| MS.gene05589 | MS.gene20109 | 0.862512 | 4.81E-64 | -1.69E-46 |
| MS.gene055941 | MS.gene20109 | 0.840338 | 9.23E-58 | -1.69E-46 |
| MS.gene056046 | MS.gene20109 | 0.808396 | 3.16E-50 | -1.69E-46 |
| MS.gene056166 | MS.gene20109 | 0.806245 | 9.03E-50 | -1.69E-46 |
| MS.gene056198 | MS.gene20109 | -0.80596 | 1.04E-49 | -1.69E-46 |
| MS.gene056387 | MS.gene20109 | 0.892209 | 1.96E-74 | -1.69E-46 |
| MS.gene056422 | MS.gene20109 | 0.805138 | 1.54E-49 | -1.69E-46 |
| MS.gene056446 | MS.gene20109 | 0.847168 | 1.37E-59 | -1.69E-46 |
| MS.gene056448 | MS.gene20109 | 0.803618 | 3.20E-49 | -1.69E-46 |
| MS.gene056504 | MS.gene20109 | 0.866807 | 2.18E-65 | -1.69E-46 |
| MS.gene056510 | MS.gene20109 | 0.82748 | 1.53E-54 | -1.69E-46 |
| MS.gene056657 | MS.gene20109 | 0.820516 | 6.58E-53 | -1.69E-46 |
| MS.gene056697 | MS.gene20109 | -0.810443 | 1.15E-50 | -1.69E-46 |
| MS.gene057076 | MS.gene20109 | 0.87933 | 1.36E-69 | -1.69E-46 |
| MS.gene057086 | MS.gene20109 | 0.82153 | 3.84E-53 | -1.69E-46 |
| MS.gene057734 | MS.gene20109 | 0.801447 | 8.96E-49 | -1.69E-46 |
| MS.gene057856 | MS.gene20109 | 0.81472 | 1.33E-51 | -1.69E-46 |
| MS.gene057857 | MS.gene20109 | 0.846864 | 1.66E-59 | -1.69E-46 |
| MS.gene05787 | MS.gene20109 | 0.838293 | 3.13E-57 | -1.69E-46 |
| MS.gene058130 | MS.gene20109 | 0.811664 | 6.25E-51 | -1.69E-46 |
| MS.gene058157 | MS.gene20109 | 0.841389 | 4.90E-58 | -1.69E-46 |
| MS.gene058338 | MS.gene20109 | 0.836053 | 1.17E-56 | -1.69E-46 |
| MS.gene05837 | MS.gene20109 | 0.84827 | 6.82E-60 | -1.69E-46 |
| MS.gene058382 | MS.gene20109 | -0.811556 | 6.60E-51 | -1.69E-46 |
| MS.gene058419 | MS.gene20109 | 0.832553 | 8.85E-56 | -1.69E-46 |
| MS.gene058838 | MS.gene20109 | 0.807602 | 4.67E-50 | -1.69E-46 |
| MS.gene059022 | MS.gene20109 | 0.804543 | 2.05E-49 | -1.69E-46 |
| MS.gene059023 | MS.gene20109 | 0.846058 | 2.76E-59 | -1.69E-46 |
| MS.gene05913 | MS.gene20109 | 0.841235 | 5.37E-58 | -1.69E-46 |
| MS.gene05926 | MS.gene20109 | -0.81598 | 7.00E-52 | -1.69E-46 |
| MS.gene059305 | MS.gene20109 | 0.806309 | 8.76E-50 | -1.69E-46 |
| MS.gene059367 | MS.gene20109 | 0.801292 | 9.64E-49 | -1.69E-46 |
| MS.gene059667 | MS.gene20109 | 0.834685 | 2.60E-56 | -1.69E-46 |
| MS.gene059677 | MS.gene20109 | 0.805705 | 1.17E-49 | -1.69E-46 |
| MS.gene059703 | MS.gene20109 | -0.814821 | 1.27E-51 | -1.69E-46 |
| MS.gene059865 | MS.gene20109 | 0.84527 | 4.51E-59 | -1.69E-46 |
| MS.gene06000 | MS.gene20109 | 0.841654 | 4.17E-58 | -1.69E-46 |
| MS.gene060595 | MS.gene20109 | -0.806137 | 9.52E-50 | -1.69E-46 |
| MS.gene060703 | MS.gene20109 | 0.80556 | 1.26E-49 | -1.69E-46 |
| MS.gene060762 | MS.gene20109 | 0.818555 | 1.84E-52 | -1.69E-46 |
| MS.gene060778 | MS.gene20109 | 0.875526 | 2.88E-68 | -1.69E-46 |
| MS.gene06077 | MS.gene20109 | 0.813451 | 2.54E-51 | -1.69E-46 |
| MS.gene060835 | MS.gene20109 | 0.800466 | 1.42E-48 | -1.69E-46 |
| MS.gene06097 | MS.gene20109 | 0.845413 | 4.13E-59 | -1.69E-46 |
| MS.gene060982 | MS.gene20109 | 0.843447 | 1.39E-58 | -1.69E-46 |
| MS.gene061218 | MS.gene20109 | 0.823006 | 1.75E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20109.t1 | MTR_0388s0020 | 92.667 | 150 | 11 | 0 | 1 | 150 | 1 | 150 | 3.73e-104 | 294 |
| MS.gene20109.t1 | MTR_4g025830 | 53.947 | 152 | 56 | 5 | 7 | 147 | 3 | 151 | 5.09e-47 | 150 |
| MS.gene20109.t1 | MTR_7g118010 | 60.294 | 68 | 26 | 1 | 74 | 141 | 22 | 88 | 7.18e-24 | 89.7 |
| MS.gene20109.t1 | MTR_3g092220 | 50.000 | 74 | 36 | 1 | 74 | 147 | 32 | 104 | 1.73e-20 | 81.3 |
| MS.gene20109.t1 | MTR_8g026730 | 55.882 | 68 | 29 | 1 | 74 | 141 | 26 | 92 | 4.86e-20 | 79.7 |
| MS.gene20109.t1 | MTR_3g084250 | 49.398 | 83 | 37 | 3 | 61 | 141 | 10 | 89 | 1.02e-18 | 75.9 |
| MS.gene20109.t1 | MTR_4g072240 | 44.706 | 85 | 42 | 3 | 57 | 139 | 7 | 88 | 1.04e-17 | 73.6 |
| MS.gene20109.t1 | MTR_4g072500 | 42.045 | 88 | 46 | 3 | 56 | 141 | 5 | 89 | 2.24e-17 | 72.8 |
| MS.gene20109.t1 | MTR_4g072570 | 45.783 | 83 | 40 | 3 | 61 | 141 | 10 | 89 | 2.34e-17 | 72.4 |
| MS.gene20109.t1 | MTR_4g072300 | 44.706 | 85 | 42 | 3 | 57 | 139 | 7 | 88 | 2.68e-17 | 72.4 |
| MS.gene20109.t1 | MTR_4g072870 | 41.860 | 86 | 45 | 3 | 58 | 141 | 8 | 90 | 5.47e-17 | 71.6 |
| MS.gene20109.t1 | MTR_4g072530 | 40.909 | 88 | 47 | 3 | 56 | 141 | 5 | 89 | 6.40e-17 | 71.2 |
| MS.gene20109.t1 | MTR_4g072220 | 40.909 | 88 | 47 | 3 | 57 | 142 | 7 | 91 | 1.10e-16 | 70.9 |
| MS.gene20109.t1 | MTR_4g072980 | 39.080 | 87 | 50 | 2 | 56 | 141 | 8 | 92 | 1.16e-16 | 70.9 |
| MS.gene20109.t1 | MTR_4g072640 | 39.773 | 88 | 48 | 3 | 56 | 141 | 5 | 89 | 1.46e-16 | 70.5 |
| MS.gene20109.t1 | MTR_4g072600 | 43.590 | 78 | 40 | 2 | 66 | 142 | 11 | 85 | 5.06e-16 | 68.9 |
| MS.gene20109.t1 | MTR_4g072190 | 37.755 | 98 | 55 | 3 | 46 | 141 | 6 | 99 | 8.74e-16 | 68.6 |
| MS.gene20109.t1 | MTR_3g117640 | 44.595 | 74 | 38 | 2 | 74 | 146 | 33 | 104 | 8.87e-16 | 68.9 |
| MS.gene20109.t1 | MTR_4g072860 | 46.377 | 69 | 33 | 2 | 74 | 141 | 25 | 90 | 1.41e-15 | 68.2 |
| MS.gene20109.t1 | MTR_4g072330 | 44.000 | 75 | 38 | 2 | 68 | 141 | 16 | 87 | 3.91e-15 | 66.6 |
| MS.gene20109.t1 | MTR_3g084210 | 50.000 | 60 | 26 | 2 | 72 | 130 | 22 | 78 | 4.49e-15 | 66.6 |
| MS.gene20109.t1 | MTR_4g072850 | 46.269 | 67 | 32 | 2 | 74 | 139 | 26 | 89 | 5.03e-15 | 66.6 |
| MS.gene20109.t1 | MTR_3g084230 | 50.000 | 60 | 26 | 2 | 72 | 130 | 22 | 78 | 5.62e-15 | 66.2 |
| MS.gene20109.t1 | MTR_3g084160 | 51.667 | 60 | 25 | 2 | 72 | 130 | 22 | 78 | 7.28e-15 | 66.2 |
| MS.gene20109.t1 | MTR_8g076040 | 48.529 | 68 | 32 | 1 | 74 | 141 | 40 | 104 | 7.37e-15 | 66.6 |
| MS.gene20109.t1 | MTR_4g072910 | 49.275 | 69 | 30 | 3 | 62 | 129 | 23 | 87 | 9.21e-15 | 66.2 |
| MS.gene20109.t1 | MTR_4g072230 | 43.662 | 71 | 34 | 2 | 70 | 139 | 21 | 86 | 1.09e-14 | 65.5 |
| MS.gene20109.t1 | MTR_8g461420 | 50.000 | 60 | 26 | 2 | 72 | 130 | 22 | 78 | 1.18e-14 | 65.5 |
| MS.gene20109.t1 | MTR_3g113310 | 42.857 | 70 | 37 | 1 | 72 | 141 | 39 | 105 | 1.35e-14 | 65.9 |
| MS.gene20109.t1 | MTR_3g117610 | 42.029 | 69 | 37 | 1 | 73 | 141 | 43 | 108 | 1.56e-14 | 65.9 |
| MS.gene20109.t1 | MTR_3g084190 | 51.667 | 60 | 25 | 2 | 72 | 130 | 22 | 78 | 1.58e-14 | 65.1 |
| MS.gene20109.t1 | MTR_4g072310 | 40.541 | 74 | 40 | 2 | 69 | 141 | 20 | 90 | 1.58e-14 | 65.5 |
| MS.gene20109.t1 | MTR_4g072270 | 44.444 | 72 | 36 | 2 | 69 | 139 | 20 | 88 | 1.86e-14 | 65.1 |
| MS.gene20109.t1 | MTR_4g072480 | 43.373 | 83 | 42 | 3 | 61 | 141 | 10 | 89 | 1.98e-14 | 65.1 |
| MS.gene20109.t1 | MTR_5g021820 | 41.975 | 81 | 42 | 2 | 61 | 141 | 28 | 103 | 2.72e-14 | 65.1 |
| MS.gene20109.t1 | MTR_3g117630 | 46.479 | 71 | 33 | 3 | 61 | 129 | 10 | 77 | 2.79e-14 | 64.7 |
| MS.gene20109.t1 | MTR_3g110038 | 41.250 | 80 | 43 | 2 | 61 | 139 | 11 | 87 | 2.82e-14 | 64.7 |
| MS.gene20109.t1 | MTR_4g072880 | 40.476 | 84 | 45 | 3 | 58 | 139 | 8 | 88 | 2.83e-14 | 64.7 |
| MS.gene20109.t1 | MTR_4g072560 | 51.724 | 58 | 25 | 2 | 74 | 130 | 31 | 86 | 3.18e-14 | 64.7 |
| MS.gene20109.t1 | MTR_4g072890 | 42.500 | 80 | 41 | 3 | 57 | 134 | 7 | 83 | 4.00e-14 | 64.3 |
| MS.gene20109.t1 | MTR_4g072620 | 40.000 | 85 | 47 | 2 | 58 | 141 | 8 | 89 | 5.19e-14 | 63.9 |
| MS.gene20109.t1 | MTR_3g084240 | 40.000 | 80 | 44 | 2 | 61 | 139 | 11 | 87 | 6.23e-14 | 63.5 |
| MS.gene20109.t1 | MTR_4g072370 | 43.243 | 74 | 38 | 2 | 69 | 141 | 17 | 87 | 6.32e-14 | 63.5 |
| MS.gene20109.t1 | MTR_4g072250 | 43.284 | 67 | 33 | 2 | 74 | 139 | 25 | 87 | 7.88e-14 | 63.5 |
| MS.gene20109.t1 | MTR_4g072260 | 37.079 | 89 | 51 | 3 | 57 | 143 | 7 | 92 | 8.08e-14 | 63.5 |
| MS.gene20109.t1 | MTR_3g084170 | 40.000 | 80 | 44 | 2 | 61 | 139 | 11 | 87 | 1.02e-13 | 63.2 |
| MS.gene20109.t1 | MTR_3g084220 | 44.286 | 70 | 35 | 2 | 61 | 129 | 11 | 77 | 1.04e-13 | 63.2 |
| MS.gene20109.t1 | MTR_3g110045 | 50.000 | 58 | 25 | 2 | 74 | 130 | 83 | 137 | 1.05e-13 | 64.7 |
| MS.gene20109.t1 | MTR_4g072550 | 39.175 | 97 | 54 | 3 | 42 | 137 | 4 | 96 | 1.06e-13 | 63.5 |
| MS.gene20109.t1 | MTR_4g072730 | 43.836 | 73 | 37 | 2 | 70 | 141 | 20 | 89 | 1.06e-13 | 63.2 |
| MS.gene20109.t1 | MTR_4g072820 | 42.647 | 68 | 35 | 2 | 75 | 141 | 20 | 84 | 1.14e-13 | 62.8 |
| MS.gene20109.t1 | MTR_4g072740 | 42.857 | 77 | 40 | 2 | 66 | 141 | 11 | 84 | 1.33e-13 | 62.8 |
| MS.gene20109.t1 | MTR_3g084150 | 41.975 | 81 | 42 | 3 | 61 | 139 | 10 | 87 | 1.57e-13 | 62.8 |
| MS.gene20109.t1 | MTR_3g084180 | 41.975 | 81 | 42 | 3 | 61 | 139 | 10 | 87 | 1.76e-13 | 62.4 |
| MS.gene20109.t1 | MTR_4g072680 | 45.570 | 79 | 38 | 3 | 61 | 137 | 10 | 85 | 1.94e-13 | 62.4 |
| MS.gene20109.t1 | MTR_4g072660 | 44.444 | 72 | 36 | 2 | 70 | 140 | 15 | 83 | 1.95e-13 | 62.4 |
| MS.gene20109.t1 | MTR_4g072460 | 45.570 | 79 | 38 | 3 | 61 | 137 | 10 | 85 | 2.35e-13 | 62.4 |
| MS.gene20109.t1 | MTR_4g072490 | 42.857 | 77 | 40 | 2 | 66 | 141 | 11 | 84 | 2.48e-13 | 62.0 |
| MS.gene20109.t1 | MTR_4g072590 | 49.231 | 65 | 26 | 3 | 74 | 134 | 19 | 80 | 2.76e-13 | 62.0 |
| MS.gene20109.t1 | MTR_4g072940 | 46.154 | 65 | 31 | 2 | 74 | 137 | 56 | 117 | 2.97e-13 | 62.8 |
| MS.gene20109.t1 | MTR_4g072580 | 39.744 | 78 | 43 | 2 | 66 | 142 | 11 | 85 | 3.44e-13 | 61.6 |
| MS.gene20109.t1 | MTR_4g072830 | 42.105 | 76 | 40 | 2 | 68 | 142 | 16 | 88 | 3.91e-13 | 61.6 |
| MS.gene20109.t1 | MTR_4g124750 | 41.333 | 75 | 39 | 2 | 69 | 141 | 61 | 132 | 4.07e-13 | 63.2 |
| MS.gene20109.t1 | MTR_4g072630 | 44.776 | 67 | 33 | 2 | 65 | 130 | 11 | 74 | 4.34e-13 | 61.2 |
| MS.gene20109.t1 | MTR_2g043960 | 41.096 | 73 | 40 | 1 | 71 | 143 | 72 | 141 | 4.69e-13 | 63.2 |
| MS.gene20109.t1 | MTR_8g461410 | 43.662 | 71 | 35 | 3 | 61 | 129 | 10 | 77 | 5.54e-13 | 61.2 |
| MS.gene20109.t1 | MTR_4g072160 | 36.364 | 99 | 43 | 2 | 44 | 142 | 23 | 101 | 9.42e-13 | 62.0 |
| MS.gene20109.t1 | MTR_5g008370 | 42.029 | 69 | 36 | 2 | 74 | 141 | 24 | 89 | 1.01e-12 | 62.0 |
| MS.gene20109.t1 | MTR_4g072930 | 37.500 | 96 | 52 | 4 | 41 | 134 | 13 | 102 | 1.03e-12 | 61.2 |
| MS.gene20109.t1 | MTR_1g009150 | 40.541 | 74 | 41 | 1 | 74 | 147 | 70 | 140 | 1.37e-12 | 62.4 |
| MS.gene20109.t1 | MTR_2g095430 | 43.860 | 57 | 32 | 0 | 81 | 137 | 52 | 108 | 1.38e-12 | 61.2 |
| MS.gene20109.t1 | MTR_5g008360 | 38.961 | 77 | 43 | 2 | 66 | 141 | 7 | 80 | 1.47e-12 | 60.1 |
| MS.gene20109.t1 | MTR_4g057810 | 43.750 | 64 | 35 | 1 | 74 | 137 | 37 | 99 | 1.49e-12 | 60.8 |
| MS.gene20109.t1 | MTR_4g072610 | 37.647 | 85 | 49 | 2 | 59 | 142 | 3 | 84 | 1.62e-12 | 60.1 |
| MS.gene20109.t1 | MTR_4g072540 | 42.029 | 69 | 36 | 2 | 74 | 141 | 20 | 85 | 1.69e-12 | 59.7 |
| MS.gene20109.t1 | MTR_4g072670 | 43.478 | 69 | 35 | 2 | 74 | 141 | 20 | 85 | 1.88e-12 | 59.7 |
| MS.gene20109.t1 | MTR_5g008350 | 44.737 | 76 | 37 | 3 | 59 | 132 | 3 | 75 | 3.09e-12 | 58.9 |
| MS.gene20109.t1 | MTR_3g084260 | 37.234 | 94 | 52 | 3 | 47 | 139 | 1 | 88 | 4.05e-12 | 58.9 |
| MS.gene20109.t1 | MTR_1g024085 | 39.326 | 89 | 49 | 3 | 60 | 147 | 23 | 107 | 5.34e-12 | 60.1 |
| MS.gene20109.t1 | MTR_4g072720 | 42.029 | 69 | 36 | 2 | 74 | 141 | 20 | 85 | 5.42e-12 | 58.5 |
| MS.gene20109.t1 | MTR_4g072465 | 41.791 | 67 | 35 | 2 | 65 | 130 | 11 | 74 | 6.78e-12 | 58.2 |
| MS.gene20109.t1 | MTR_8g461210 | 40.909 | 66 | 36 | 1 | 72 | 137 | 32 | 94 | 7.31e-12 | 58.9 |
| MS.gene20109.t1 | MTR_4g005320 | 42.857 | 63 | 33 | 1 | 75 | 137 | 70 | 129 | 7.70e-12 | 60.1 |
| MS.gene20109.t1 | MTR_4g072470 | 44.615 | 65 | 32 | 2 | 66 | 129 | 11 | 72 | 1.14e-11 | 57.8 |
| MS.gene20109.t1 | MTR_3g109160 | 37.500 | 88 | 50 | 2 | 52 | 137 | 44 | 128 | 1.42e-11 | 59.3 |
| MS.gene20109.t1 | MTR_4g072510 | 41.429 | 70 | 37 | 2 | 73 | 141 | 19 | 85 | 1.54e-11 | 57.4 |
| MS.gene20109.t1 | MTR_4g072650 | 36.471 | 85 | 50 | 2 | 59 | 142 | 3 | 84 | 1.63e-11 | 57.4 |
| MS.gene20109.t1 | MTR_2g066830 | 32.558 | 86 | 55 | 1 | 59 | 144 | 42 | 124 | 1.64e-11 | 58.5 |
| MS.gene20109.t1 | MTR_4g072450 | 42.647 | 68 | 35 | 2 | 75 | 141 | 20 | 84 | 2.12e-11 | 57.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20109.t1 | AT2G45210 | 48.701 | 154 | 69 | 4 | 1 | 147 | 1 | 151 | 4.46e-43 | 140 |
| MS.gene20109.t1 | AT3G60690 | 39.623 | 159 | 81 | 5 | 1 | 145 | 1 | 158 | 1.33e-35 | 121 |
| MS.gene20109.t1 | AT4G22620 | 41.497 | 147 | 82 | 3 | 1 | 143 | 1 | 147 | 1.54e-32 | 113 |
| MS.gene20109.t1 | AT4G12410 | 38.462 | 156 | 71 | 4 | 1 | 143 | 1 | 144 | 5.52e-30 | 107 |
| MS.gene20109.t1 | AT2G46690 | 48.052 | 77 | 40 | 0 | 74 | 150 | 23 | 99 | 1.42e-21 | 84.3 |
| MS.gene20109.t1 | AT3G61900 | 54.412 | 68 | 31 | 0 | 74 | 141 | 29 | 96 | 5.97e-21 | 83.2 |
| MS.gene20109.t1 | AT4G00880 | 50.000 | 74 | 36 | 1 | 75 | 148 | 28 | 100 | 1.54e-19 | 79.0 |
| MS.gene20109.t1 | AT5G53590 | 41.772 | 79 | 44 | 1 | 74 | 150 | 45 | 123 | 1.62e-17 | 74.3 |
| MS.gene20109.t1 | AT4G34800 | 55.738 | 61 | 26 | 1 | 75 | 134 | 21 | 81 | 2.67e-17 | 72.4 |
| MS.gene20109.t1 | AT3G03820 | 46.667 | 75 | 39 | 1 | 68 | 141 | 20 | 94 | 5.31e-17 | 71.6 |
| MS.gene20109.t1 | AT4G34810 | 48.148 | 81 | 40 | 2 | 52 | 130 | 25 | 105 | 1.46e-16 | 71.2 |
| MS.gene20109.t1 | AT4G38850 | 46.377 | 69 | 36 | 1 | 74 | 141 | 20 | 88 | 1.76e-16 | 70.1 |
| MS.gene20109.t1 | AT2G21210 | 42.308 | 78 | 43 | 2 | 69 | 145 | 22 | 98 | 2.01e-16 | 70.5 |
| MS.gene20109.t1 | AT4G34790 | 55.738 | 61 | 25 | 2 | 75 | 134 | 39 | 98 | 4.39e-16 | 69.7 |
| MS.gene20109.t1 | AT4G34770 | 46.250 | 80 | 40 | 3 | 67 | 145 | 27 | 104 | 7.66e-16 | 68.9 |
| MS.gene20109.t1 | AT2G21210 | 42.308 | 78 | 43 | 2 | 69 | 145 | 89 | 165 | 8.14e-16 | 70.5 |
| MS.gene20109.t1 | AT2G21220 | 44.928 | 69 | 35 | 1 | 74 | 142 | 39 | 104 | 2.01e-15 | 67.8 |
| MS.gene20109.t1 | AT3G43120 | 41.250 | 80 | 44 | 1 | 71 | 150 | 75 | 151 | 4.64e-15 | 68.6 |
| MS.gene20109.t1 | AT3G03850 | 47.761 | 67 | 33 | 2 | 76 | 141 | 26 | 91 | 6.44e-15 | 66.2 |
| MS.gene20109.t1 | AT5G18080 | 48.052 | 77 | 31 | 4 | 54 | 129 | 9 | 77 | 7.48e-15 | 66.2 |
| MS.gene20109.t1 | AT4G38825 | 41.573 | 89 | 42 | 3 | 54 | 141 | 9 | 88 | 1.35e-14 | 65.5 |
| MS.gene20109.t1 | AT5G18020 | 42.857 | 77 | 35 | 3 | 54 | 129 | 9 | 77 | 2.06e-14 | 65.1 |
| MS.gene20109.t1 | AT4G38840 | 52.632 | 57 | 24 | 2 | 74 | 129 | 32 | 86 | 2.14e-14 | 65.1 |
| MS.gene20109.t1 | AT4G34780 | 50.877 | 57 | 27 | 1 | 74 | 129 | 27 | 83 | 2.21e-14 | 65.5 |
| MS.gene20109.t1 | AT2G21200 | 52.632 | 57 | 24 | 2 | 74 | 129 | 20 | 74 | 2.23e-14 | 64.7 |
| MS.gene20109.t1 | AT3G20220 | 42.466 | 73 | 37 | 2 | 68 | 137 | 37 | 107 | 2.74e-14 | 65.5 |
| MS.gene20109.t1 | AT4G34760 | 43.478 | 69 | 36 | 1 | 73 | 141 | 41 | 106 | 5.29e-14 | 64.3 |
| MS.gene20109.t1 | AT3G12830 | 36.111 | 108 | 66 | 1 | 37 | 144 | 12 | 116 | 5.85e-14 | 65.1 |
| MS.gene20109.t1 | AT5G20810 | 45.312 | 64 | 32 | 1 | 71 | 134 | 75 | 135 | 6.76e-14 | 65.5 |
| MS.gene20109.t1 | AT5G18050 | 37.079 | 89 | 47 | 3 | 54 | 141 | 9 | 89 | 9.84e-14 | 63.2 |
| MS.gene20109.t1 | AT5G18030 | 41.558 | 77 | 34 | 3 | 54 | 129 | 9 | 75 | 1.19e-13 | 62.8 |
| MS.gene20109.t1 | AT5G20810 | 44.615 | 65 | 33 | 1 | 71 | 135 | 75 | 136 | 1.59e-13 | 65.1 |
| MS.gene20109.t1 | AT4G13790 | 50.877 | 57 | 26 | 2 | 74 | 129 | 24 | 79 | 2.10e-13 | 62.4 |
| MS.gene20109.t1 | AT3G03840 | 44.928 | 69 | 36 | 2 | 74 | 141 | 26 | 93 | 2.26e-13 | 62.4 |
| MS.gene20109.t1 | AT1G75580 | 35.455 | 110 | 53 | 4 | 45 | 141 | 3 | 107 | 3.06e-13 | 62.4 |
| MS.gene20109.t1 | AT5G18060 | 44.737 | 76 | 33 | 4 | 55 | 129 | 10 | 77 | 4.70e-13 | 61.6 |
| MS.gene20109.t1 | AT3G03830 | 45.588 | 68 | 36 | 1 | 75 | 141 | 24 | 91 | 5.93e-13 | 61.2 |
| MS.gene20109.t1 | AT4G38860 | 44.286 | 70 | 35 | 2 | 73 | 141 | 38 | 104 | 1.05e-12 | 60.8 |
| MS.gene20109.t1 | AT1G19830 | 43.243 | 74 | 35 | 2 | 68 | 139 | 41 | 109 | 1.33e-12 | 60.8 |
| MS.gene20109.t1 | AT1G56150 | 41.096 | 73 | 40 | 1 | 75 | 147 | 38 | 107 | 3.56e-12 | 59.7 |
| MS.gene20109.t1 | AT5G66260 | 47.273 | 55 | 26 | 1 | 75 | 129 | 34 | 85 | 7.51e-12 | 58.5 |
| MS.gene20109.t1 | AT2G18010 | 41.892 | 74 | 39 | 2 | 56 | 129 | 30 | 99 | 1.14e-11 | 58.5 |
| MS.gene20109.t1 | AT5G10990 | 36.047 | 86 | 52 | 1 | 60 | 145 | 26 | 108 | 1.16e-11 | 59.3 |
| MS.gene20109.t1 | AT4G36110 | 48.214 | 56 | 26 | 1 | 74 | 129 | 39 | 91 | 1.24e-11 | 58.2 |
| MS.gene20109.t1 | AT2G28085 | 40.678 | 59 | 35 | 0 | 81 | 139 | 62 | 120 | 4.64e-11 | 57.0 |
| MS.gene20109.t1 | AT1G75590 | 41.892 | 74 | 37 | 2 | 62 | 135 | 32 | 99 | 5.47e-11 | 57.8 |
Find 44 sgRNAs with CRISPR-Local
Find 48 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAAAGAGGAAGAGATAAAT+AGG | 0.176068 | 7.2:-57290886 | MS.gene20109:CDS |
| CCTTCGGCACGCTGAATTTC+GGG | 0.191900 | 7.2:+57290933 | None:intergenic |
| CCCTTCGGCACGCTGAATTT+CGG | 0.222131 | 7.2:+57290932 | None:intergenic |
| AAAGATGTTGAAGAGGAGTA+TGG | 0.344907 | 7.2:-57290812 | MS.gene20109:CDS |
| TTGCATCAGGTTCCAGCAAT+TGG | 0.352794 | 7.2:-57290721 | MS.gene20109:CDS |
| TACGATACCATGTAGGTTTA+CGG | 0.360176 | 7.2:-57290768 | MS.gene20109:CDS |
| CAGCAATTAAACTTCTCAAA+TGG | 0.373735 | 7.2:-57291024 | MS.gene20109:CDS |
| CGACCTGTTGAAAAGCTTCA+TGG | 0.377159 | 7.2:+57290979 | None:intergenic |
| AGCAATTAAACTTCTCAAAT+GGG | 0.385891 | 7.2:-57291023 | MS.gene20109:CDS |
| GGAAGAGATAAATAGGGTTA+TGG | 0.394223 | 7.2:-57290879 | MS.gene20109:CDS |
| GAAAGAGGAAGAGATAAATA+GGG | 0.396870 | 7.2:-57290885 | MS.gene20109:CDS |
| AGCTCGGGAAGCGTCTCGTA+TGG | 0.398392 | 7.2:-57291120 | MS.gene20109:CDS |
| CATTTGAGAAGTTTAATTGC+TGG | 0.399121 | 7.2:+57291025 | None:intergenic |
| AATAAGACGCGGATTCGAAC+TGG | 0.406236 | 7.2:-57291079 | MS.gene20109:CDS |
| TACACAACCATTTGTCCCTT+CGG | 0.440608 | 7.2:+57290917 | None:intergenic |
| GCTGGAACCTGATGCAATCC+AGG | 0.450641 | 7.2:+57290727 | None:intergenic |
| TAAGCAATTCACTAAACAAT+GGG | 0.459340 | 7.2:+57290834 | None:intergenic |
| TGGGGCCGCAAGCTAACAAC+GGG | 0.472229 | 7.2:-57291004 | MS.gene20109:CDS |
| GCTCGGGAAGCGTCTCGTAT+GGG | 0.478069 | 7.2:-57291119 | MS.gene20109:CDS |
| AGATTCACGGATTTAAGCTC+GGG | 0.478403 | 7.2:-57291135 | MS.gene20109:CDS |
| AGGTCGAGTTATACTCGGTT+AGG | 0.479994 | 7.2:-57290962 | MS.gene20109:CDS |
| ATCAAGACCTGGATTGCATC+AGG | 0.485980 | 7.2:-57290734 | MS.gene20109:CDS |
| CCCGAAATTCAGCGTGCCGA+AGG | 0.490065 | 7.2:-57290933 | MS.gene20109:CDS |
| GTATCGTAATCCCACCTTGA+TGG | 0.497196 | 7.2:+57290783 | None:intergenic |
| CGGCACGCTGAATTTCGGGC+TGG | 0.506693 | 7.2:+57290937 | None:intergenic |
| CAGCGTGCCGAAGGGACAAA+TGG | 0.509825 | 7.2:-57290924 | MS.gene20109:CDS |
| GGGACAAATGGTTGTGTATG+TGG | 0.525067 | 7.2:-57290912 | MS.gene20109:CDS |
| TGGCACCCGTTGTTAGCTTG+CGG | 0.529427 | 7.2:+57290999 | None:intergenic |
| AAGATTCACGGATTTAAGCT+CGG | 0.536802 | 7.2:-57291136 | MS.gene20109:CDS |
| TGTGTATGTGGGACAGAAAG+AGG | 0.554416 | 7.2:-57290900 | MS.gene20109:CDS |
| TTAAGCAATTCACTAAACAA+TGG | 0.555508 | 7.2:+57290833 | None:intergenic |
| ATTGCTTAAAGATGTTGAAG+AGG | 0.557241 | 7.2:-57290819 | MS.gene20109:CDS |
| GGGTGGTTAAAGTATATCAC+TGG | 0.571494 | 7.2:+57290854 | None:intergenic |
| AGTTTGAACGGATCAAGACC+TGG | 0.576336 | 7.2:-57290745 | MS.gene20109:CDS |
| GTAGGTTTACGGAGTTTGAA+CGG | 0.580984 | 7.2:-57290757 | MS.gene20109:CDS |
| CCGAAATTCAGCGTGCCGAA+GGG | 0.592901 | 7.2:-57290932 | MS.gene20109:CDS |
| TCAAACTCCGTAAACCTACA+TGG | 0.593678 | 7.2:+57290761 | None:intergenic |
| TCAACAGGTCGAGTTATACT+CGG | 0.595591 | 7.2:-57290967 | MS.gene20109:CDS |
| GCAATTCACTAAACAATGGG+TGG | 0.601342 | 7.2:+57290837 | None:intergenic |
| GCAATTAAACTTCTCAAATG+GGG | 0.620747 | 7.2:-57291022 | MS.gene20109:CDS |
| GTGGGATTACGATACCATGT+AGG | 0.627453 | 7.2:-57290775 | MS.gene20109:CDS |
| ATGGGGCCGCAAGCTAACAA+CGG | 0.631433 | 7.2:-57291005 | MS.gene20109:CDS |
| GGACAAATGGTTGTGTATGT+GGG | 0.635159 | 7.2:-57290911 | MS.gene20109:CDS |
| GATTGATGTTTAATAAGACG+CGG | 0.689607 | 7.2:-57291090 | MS.gene20109:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AGCAATTAAACTTCTCAAAT+GGG | - | chr7.2:57290831-57290850 | MS.gene20109:CDS | 25.0% |
| ! | TAAGCAATTCACTAAACAAT+GGG | + | chr7.2:57291023-57291042 | None:intergenic | 25.0% |
| ! | TTAAGCAATTCACTAAACAA+TGG | + | chr7.2:57291024-57291043 | None:intergenic | 25.0% |
| AGAAAGAGGAAGAGATAAAT+AGG | - | chr7.2:57290968-57290987 | MS.gene20109:CDS | 30.0% | |
| ATTGCTTAAAGATGTTGAAG+AGG | - | chr7.2:57291035-57291054 | MS.gene20109:CDS | 30.0% | |
| CAGCAATTAAACTTCTCAAA+TGG | - | chr7.2:57290830-57290849 | MS.gene20109:CDS | 30.0% | |
| CATTTGAGAAGTTTAATTGC+TGG | + | chr7.2:57290832-57290851 | None:intergenic | 30.0% | |
| GAAAGAGGAAGAGATAAATA+GGG | - | chr7.2:57290969-57290988 | MS.gene20109:CDS | 30.0% | |
| GATTGATGTTTAATAAGACG+CGG | - | chr7.2:57290764-57290783 | MS.gene20109:CDS | 30.0% | |
| GCAATTAAACTTCTCAAATG+GGG | - | chr7.2:57290832-57290851 | MS.gene20109:CDS | 30.0% | |
| AAAGATGTTGAAGAGGAGTA+TGG | - | chr7.2:57291042-57291061 | MS.gene20109:CDS | 35.0% | |
| AAGATTCACGGATTTAAGCT+CGG | - | chr7.2:57290718-57290737 | MS.gene20109:CDS | 35.0% | |
| GGAAGAGATAAATAGGGTTA+TGG | - | chr7.2:57290975-57290994 | MS.gene20109:CDS | 35.0% | |
| TACGATACCATGTAGGTTTA+CGG | - | chr7.2:57291086-57291105 | MS.gene20109:CDS | 35.0% | |
| !!! | ATGGTTTTAACCATCAAGGT+GGG | - | chr7.2:57291061-57291080 | MS.gene20109:CDS | 35.0% |
| !!! | GAGTATGGTTTTAACCATCA+AGG | - | chr7.2:57291057-57291076 | MS.gene20109:CDS | 35.0% |
| !!! | TATGGTTTTAACCATCAAGG+TGG | - | chr7.2:57291060-57291079 | MS.gene20109:CDS | 35.0% |
| AGATTCACGGATTTAAGCTC+GGG | - | chr7.2:57290719-57290738 | MS.gene20109:CDS | 40.0% | |
| GCAATTCACTAAACAATGGG+TGG | + | chr7.2:57291020-57291039 | None:intergenic | 40.0% | |
| GGACAAATGGTTGTGTATGT+GGG | - | chr7.2:57290943-57290962 | MS.gene20109:CDS | 40.0% | |
| GGGTGGTTAAAGTATATCAC+TGG | + | chr7.2:57291003-57291022 | None:intergenic | 40.0% | |
| GTAGGTTTACGGAGTTTGAA+CGG | - | chr7.2:57291097-57291116 | MS.gene20109:CDS | 40.0% | |
| TACACAACCATTTGTCCCTT+CGG | + | chr7.2:57290940-57290959 | None:intergenic | 40.0% | |
| TCAAACTCCGTAAACCTACA+TGG | + | chr7.2:57291096-57291115 | None:intergenic | 40.0% | |
| TCAACAGGTCGAGTTATACT+CGG | - | chr7.2:57290887-57290906 | MS.gene20109:CDS | 40.0% | |
| AATAAGACGCGGATTCGAAC+TGG | - | chr7.2:57290775-57290794 | MS.gene20109:CDS | 45.0% | |
| AGGTCGAGTTATACTCGGTT+AGG | - | chr7.2:57290892-57290911 | MS.gene20109:CDS | 45.0% | |
| AGTTTGAACGGATCAAGACC+TGG | - | chr7.2:57291109-57291128 | MS.gene20109:CDS | 45.0% | |
| ATCAAGACCTGGATTGCATC+AGG | - | chr7.2:57291120-57291139 | MS.gene20109:CDS | 45.0% | |
| CGACCTGTTGAAAAGCTTCA+TGG | + | chr7.2:57290878-57290897 | None:intergenic | 45.0% | |
| GGGACAAATGGTTGTGTATG+TGG | - | chr7.2:57290942-57290961 | MS.gene20109:CDS | 45.0% | |
| GTATCGTAATCCCACCTTGA+TGG | + | chr7.2:57291074-57291093 | None:intergenic | 45.0% | |
| GTGGGATTACGATACCATGT+AGG | - | chr7.2:57291079-57291098 | MS.gene20109:CDS | 45.0% | |
| TGTGTATGTGGGACAGAAAG+AGG | - | chr7.2:57290954-57290973 | MS.gene20109:CDS | 45.0% | |
| TTGCATCAGGTTCCAGCAAT+TGG | - | chr7.2:57291133-57291152 | MS.gene20109:CDS | 45.0% | |
| ! | GTGCCATGAAGCTTTTCAAC+AGG | - | chr7.2:57290872-57290891 | MS.gene20109:CDS | 45.0% |
| ATGGGGCCGCAAGCTAACAA+CGG | - | chr7.2:57290849-57290868 | MS.gene20109:CDS | 55.0% | |
| CCCTTCGGCACGCTGAATTT+CGG | + | chr7.2:57290925-57290944 | None:intergenic | 55.0% | |
| CCGAAATTCAGCGTGCCGAA+GGG | - | chr7.2:57290922-57290941 | MS.gene20109:CDS | 55.0% | |
| CCTTCGGCACGCTGAATTTC+GGG | + | chr7.2:57290924-57290943 | None:intergenic | 55.0% | |
| GCTGGAACCTGATGCAATCC+AGG | + | chr7.2:57291130-57291149 | None:intergenic | 55.0% | |
| ! | TGGCACCCGTTGTTAGCTTG+CGG | + | chr7.2:57290858-57290877 | None:intergenic | 55.0% |
| CAGCGTGCCGAAGGGACAAA+TGG | - | chr7.2:57290930-57290949 | MS.gene20109:CDS | 60.0% | |
| CCCGAAATTCAGCGTGCCGA+AGG | - | chr7.2:57290921-57290940 | MS.gene20109:CDS | 60.0% | |
| TGGGGCCGCAAGCTAACAAC+GGG | - | chr7.2:57290850-57290869 | MS.gene20109:CDS | 60.0% | |
| !! | AGCTCGGGAAGCGTCTCGTA+TGG | - | chr7.2:57290734-57290753 | MS.gene20109:CDS | 60.0% |
| !! | GCTCGGGAAGCGTCTCGTAT+GGG | - | chr7.2:57290735-57290754 | MS.gene20109:CDS | 60.0% |
| CGGCACGCTGAATTTCGGGC+TGG | + | chr7.2:57290920-57290939 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 57290712 | 57291164 | 57290712 | ID=MS.gene20109 |
| chr7.2 | mRNA | 57290712 | 57291164 | 57290712 | ID=MS.gene20109.t1;Parent=MS.gene20109 |
| chr7.2 | exon | 57290712 | 57291164 | 57290712 | ID=MS.gene20109.t1.exon1;Parent=MS.gene20109.t1 |
| chr7.2 | CDS | 57290712 | 57291164 | 57290712 | ID=cds.MS.gene20109.t1;Parent=MS.gene20109.t1 |
| Gene Sequence |
| Protein sequence |
