Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27264.t1 | XP_003589327.1 | 98.2 | 508 | 9 | 0 | 46 | 553 | 38 | 545 | 7.40E-243 | 849.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27264.t1 | D9R4W7 | 44.4 | 405 | 216 | 5 | 132 | 535 | 11 | 407 | 4.2e-85 | 317.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27264.t1 | G7I5C6 | 98.2 | 508 | 9 | 0 | 46 | 553 | 38 | 545 | 5.3e-243 | 849.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049173 | MS.gene27264 | 0.803804 | 2.93E-49 | -1.69E-46 |
| MS.gene049222 | MS.gene27264 | 0.837861 | 4.05E-57 | -1.69E-46 |
| MS.gene049356 | MS.gene27264 | 0.852659 | 3.99E-61 | -1.69E-46 |
| MS.gene049369 | MS.gene27264 | 0.852412 | 4.70E-61 | -1.69E-46 |
| MS.gene049396 | MS.gene27264 | 0.804573 | 2.03E-49 | -1.69E-46 |
| MS.gene049609 | MS.gene27264 | 0.846442 | 2.17E-59 | -1.69E-46 |
| MS.gene049633 | MS.gene27264 | 0.832083 | 1.16E-55 | -1.69E-46 |
| MS.gene049805 | MS.gene27264 | 0.803426 | 3.51E-49 | -1.69E-46 |
| MS.gene050538 | MS.gene27264 | 0.812718 | 3.68E-51 | -1.69E-46 |
| MS.gene050593 | MS.gene27264 | 0.80587 | 1.08E-49 | -1.69E-46 |
| MS.gene050675 | MS.gene27264 | 0.822197 | 2.69E-53 | -1.69E-46 |
| MS.gene050747 | MS.gene27264 | 0.834797 | 2.43E-56 | -1.69E-46 |
| MS.gene050772 | MS.gene27264 | 0.847255 | 1.30E-59 | -1.69E-46 |
| MS.gene05080 | MS.gene27264 | 0.844279 | 8.34E-59 | -1.69E-46 |
| MS.gene050950 | MS.gene27264 | 0.833611 | 4.83E-56 | -1.69E-46 |
| MS.gene05105 | MS.gene27264 | 0.840063 | 1.09E-57 | -1.69E-46 |
| MS.gene051268 | MS.gene27264 | 0.806731 | 7.13E-50 | -1.69E-46 |
| MS.gene051360 | MS.gene27264 | 0.829209 | 5.85E-55 | -1.69E-46 |
| MS.gene051438 | MS.gene27264 | 0.806936 | 6.46E-50 | -1.69E-46 |
| MS.gene051617 | MS.gene27264 | 0.813734 | 2.20E-51 | -1.69E-46 |
| MS.gene051666 | MS.gene27264 | 0.81121 | 7.85E-51 | -1.69E-46 |
| MS.gene051734 | MS.gene27264 | 0.821827 | 3.28E-53 | -1.69E-46 |
| MS.gene051810 | MS.gene27264 | 0.818473 | 1.92E-52 | -1.69E-46 |
| MS.gene051838 | MS.gene27264 | 0.838674 | 2.50E-57 | -1.69E-46 |
| MS.gene051858 | MS.gene27264 | 0.807583 | 4.71E-50 | -1.69E-46 |
| MS.gene052164 | MS.gene27264 | 0.812309 | 4.52E-51 | -1.69E-46 |
| MS.gene052346 | MS.gene27264 | 0.807197 | 5.68E-50 | -1.69E-46 |
| MS.gene052484 | MS.gene27264 | 0.805531 | 1.28E-49 | -1.69E-46 |
| MS.gene052615 | MS.gene27264 | 0.825637 | 4.20E-54 | -1.69E-46 |
| MS.gene052870 | MS.gene27264 | 0.831519 | 1.59E-55 | -1.69E-46 |
| MS.gene052872 | MS.gene27264 | 0.83053 | 2.79E-55 | -1.69E-46 |
| MS.gene052966 | MS.gene27264 | 0.833857 | 4.19E-56 | -1.69E-46 |
| MS.gene052982 | MS.gene27264 | 0.805709 | 1.17E-49 | -1.69E-46 |
| MS.gene053009 | MS.gene27264 | 0.816244 | 6.11E-52 | -1.69E-46 |
| MS.gene053203 | MS.gene27264 | 0.801793 | 7.61E-49 | -1.69E-46 |
| MS.gene053207 | MS.gene27264 | 0.852933 | 3.33E-61 | -1.69E-46 |
| MS.gene053209 | MS.gene27264 | 0.81865 | 1.76E-52 | -1.69E-46 |
| MS.gene053213 | MS.gene27264 | 0.817653 | 2.95E-52 | -1.69E-46 |
| MS.gene053286 | MS.gene27264 | 0.812856 | 3.43E-51 | -1.69E-46 |
| MS.gene053449 | MS.gene27264 | 0.821599 | 3.71E-53 | -1.69E-46 |
| MS.gene053574 | MS.gene27264 | 0.84114 | 5.69E-58 | -1.69E-46 |
| MS.gene053632 | MS.gene27264 | 0.828703 | 7.76E-55 | -1.69E-46 |
| MS.gene053824 | MS.gene27264 | 0.82212 | 2.81E-53 | -1.69E-46 |
| MS.gene053912 | MS.gene27264 | 0.866726 | 2.31E-65 | -1.69E-46 |
| MS.gene053916 | MS.gene27264 | 0.805124 | 1.55E-49 | -1.69E-46 |
| MS.gene054600 | MS.gene27264 | 0.854457 | 1.22E-61 | -1.69E-46 |
| MS.gene054642 | MS.gene27264 | 0.803451 | 3.46E-49 | -1.69E-46 |
| MS.gene054927 | MS.gene27264 | 0.809205 | 2.12E-50 | -1.69E-46 |
| MS.gene05494 | MS.gene27264 | 0.860984 | 1.41E-63 | -1.69E-46 |
| MS.gene05505 | MS.gene27264 | 0.823504 | 1.34E-53 | -1.69E-46 |
| MS.gene055206 | MS.gene27264 | 0.800033 | 1.74E-48 | -1.69E-46 |
| MS.gene055224 | MS.gene27264 | 0.806054 | 9.91E-50 | -1.69E-46 |
| MS.gene055577 | MS.gene27264 | 0.842447 | 2.57E-58 | -1.69E-46 |
| MS.gene055722 | MS.gene27264 | 0.867105 | 1.75E-65 | -1.69E-46 |
| MS.gene055741 | MS.gene27264 | 0.83452 | 2.86E-56 | -1.69E-46 |
| MS.gene055744 | MS.gene27264 | 0.827913 | 1.20E-54 | -1.69E-46 |
| MS.gene055909 | MS.gene27264 | 0.810043 | 1.40E-50 | -1.69E-46 |
| MS.gene055911 | MS.gene27264 | 0.80564 | 1.21E-49 | -1.69E-46 |
| MS.gene055941 | MS.gene27264 | 0.827627 | 1.41E-54 | -1.69E-46 |
| MS.gene056166 | MS.gene27264 | 0.808982 | 2.37E-50 | -1.69E-46 |
| MS.gene056283 | MS.gene27264 | 0.818032 | 2.42E-52 | -1.69E-46 |
| MS.gene056449 | MS.gene27264 | 0.809296 | 2.03E-50 | -1.69E-46 |
| MS.gene056487 | MS.gene27264 | 0.80071 | 1.27E-48 | -1.69E-46 |
| MS.gene056510 | MS.gene27264 | 0.809992 | 1.44E-50 | -1.69E-46 |
| MS.gene056511 | MS.gene27264 | 0.808717 | 2.70E-50 | -1.69E-46 |
| MS.gene056609 | MS.gene27264 | 0.808264 | 3.37E-50 | -1.69E-46 |
| MS.gene05664 | MS.gene27264 | 0.847922 | 8.51E-60 | -1.69E-46 |
| MS.gene056659 | MS.gene27264 | 0.809482 | 1.85E-50 | -1.69E-46 |
| MS.gene05666 | MS.gene27264 | 0.867492 | 1.31E-65 | -1.69E-46 |
| MS.gene056897 | MS.gene27264 | 0.843175 | 1.65E-58 | -1.69E-46 |
| MS.gene056947 | MS.gene27264 | 0.81549 | 9.00E-52 | -1.69E-46 |
| MS.gene057076 | MS.gene27264 | 0.857886 | 1.20E-62 | -1.69E-46 |
| MS.gene057124 | MS.gene27264 | 0.826686 | 2.37E-54 | -1.69E-46 |
| MS.gene057331 | MS.gene27264 | 0.830684 | 2.56E-55 | -1.69E-46 |
| MS.gene057416 | MS.gene27264 | 0.80423 | 2.39E-49 | -1.69E-46 |
| MS.gene057734 | MS.gene27264 | 0.863257 | 2.83E-64 | -1.69E-46 |
| MS.gene057831 | MS.gene27264 | 0.809168 | 2.16E-50 | -1.69E-46 |
| MS.gene058082 | MS.gene27264 | 0.801716 | 7.90E-49 | -1.69E-46 |
| MS.gene058090 | MS.gene27264 | 0.809297 | 2.03E-50 | -1.69E-46 |
| MS.gene058120 | MS.gene27264 | 0.856101 | 4.04E-62 | -1.69E-46 |
| MS.gene058130 | MS.gene27264 | 0.832071 | 1.17E-55 | -1.69E-46 |
| MS.gene058448 | MS.gene27264 | 0.8152 | 1.04E-51 | -1.69E-46 |
| MS.gene058700 | MS.gene27264 | 0.804889 | 1.74E-49 | -1.69E-46 |
| MS.gene058723 | MS.gene27264 | 0.834635 | 2.68E-56 | -1.69E-46 |
| MS.gene058748 | MS.gene27264 | 0.828087 | 1.09E-54 | -1.69E-46 |
| MS.gene058773 | MS.gene27264 | 0.826735 | 2.30E-54 | -1.69E-46 |
| MS.gene058838 | MS.gene27264 | 0.820099 | 8.20E-53 | -1.69E-46 |
| MS.gene058948 | MS.gene27264 | 0.888622 | 5.01E-73 | -1.69E-46 |
| MS.gene059023 | MS.gene27264 | 0.819025 | 1.44E-52 | -1.69E-46 |
| MS.gene05913 | MS.gene27264 | 0.80834 | 3.25E-50 | -1.69E-46 |
| MS.gene059674 | MS.gene27264 | 0.811147 | 8.10E-51 | -1.69E-46 |
| MS.gene059680 | MS.gene27264 | 0.804031 | 2.63E-49 | -1.69E-46 |
| MS.gene059711 | MS.gene27264 | 0.827073 | 1.91E-54 | -1.69E-46 |
| MS.gene059718 | MS.gene27264 | 0.843941 | 1.03E-58 | -1.69E-46 |
| MS.gene059865 | MS.gene27264 | 0.800092 | 1.69E-48 | -1.69E-46 |
| MS.gene05986 | MS.gene27264 | 0.81717 | 3.79E-52 | -1.69E-46 |
| MS.gene060762 | MS.gene27264 | 0.824662 | 7.15E-54 | -1.69E-46 |
| MS.gene060804 | MS.gene27264 | 0.806245 | 9.03E-50 | -1.69E-46 |
| MS.gene060835 | MS.gene27264 | 0.817594 | 3.04E-52 | -1.69E-46 |
| MS.gene060837 | MS.gene27264 | 0.860786 | 1.62E-63 | -1.69E-46 |
| MS.gene06092 | MS.gene27264 | 0.801923 | 7.16E-49 | -1.69E-46 |
| MS.gene060982 | MS.gene27264 | 0.801474 | 8.85E-49 | -1.69E-46 |
| MS.gene061041 | MS.gene27264 | 0.826867 | 2.14E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27264.t1 | MTR_1g022980 | 92.280 | 557 | 27 | 4 | 1 | 553 | 1 | 545 | 0.0 | 954 |
| MS.gene27264.t1 | MTR_5g089970 | 38.462 | 299 | 148 | 7 | 185 | 450 | 107 | 402 | 2.89e-45 | 168 |
| MS.gene27264.t1 | MTR_5g089970 | 38.014 | 292 | 145 | 7 | 192 | 450 | 106 | 394 | 6.62e-42 | 158 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27264.t1 | AT5G57960 | 83.445 | 447 | 68 | 1 | 102 | 548 | 90 | 530 | 0.0 | 759 |
| MS.gene27264.t1 | AT5G57960 | 86.133 | 375 | 52 | 0 | 175 | 549 | 3 | 377 | 0.0 | 687 |
| MS.gene27264.t1 | AT3G49725 | 35.535 | 318 | 166 | 8 | 169 | 450 | 157 | 471 | 1.01e-41 | 159 |
Find 110 sgRNAs with CRISPR-Local
Find 392 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTTGTTACCATTTGAAAA+TGG | 0.177139 | 1.1:+1586554 | MS.gene27264:CDS |
| AGCTGATACTGCTGGATTAT+TGG | 0.256175 | 1.1:+1581523 | MS.gene27264:CDS |
| AGAAGATTCTTTGAGTGAAT+TGG | 0.301356 | 1.1:+1581493 | MS.gene27264:CDS |
| CAATTCCAAAGTTGATGGTT+TGG | 0.311895 | 1.1:+1584956 | MS.gene27264:CDS |
| GTTGTTACTGTTATCGTTGT+TGG | 0.344925 | 1.1:-1580696 | None:intergenic |
| CTTTGTTACCATTTGAAAAT+GGG | 0.348300 | 1.1:+1586555 | MS.gene27264:CDS |
| GATATCAGAATCATCACTTT+TGG | 0.348904 | 1.1:+1584727 | MS.gene27264:CDS |
| ACCGAAAGCAGTACCGTAAT+CGG | 0.366937 | 1.1:+1583879 | MS.gene27264:CDS |
| GCCGATTACGGTACTGCTTT+CGG | 0.367836 | 1.1:-1583880 | None:intergenic |
| CATTTATCTGTTGCTCGGCC+AGG | 0.375286 | 1.1:-1584897 | None:intergenic |
| TAAAACCAACAGTGTCTGTT+AGG | 0.378664 | 1.1:-1584526 | None:intergenic |
| ATCATCAATTCCAAAGTTGA+TGG | 0.378860 | 1.1:+1584951 | MS.gene27264:CDS |
| AACACATGAAGCATCTTTAC+AGG | 0.379979 | 1.1:+1583135 | MS.gene27264:CDS |
| TGGTGCATGTGATTGATATC+AGG | 0.385889 | 1.1:+1584747 | MS.gene27264:CDS |
| GGAGATGATTGTTCTTGAAT+TGG | 0.387058 | 1.1:-1580614 | None:intergenic |
| CTAGGTTGCATTAGCACAAA+TGG | 0.387279 | 1.1:+1583482 | MS.gene27264:intron |
| CCAATGTACGTCCTAGGGTT+TGG | 0.404578 | 1.1:-1582536 | None:intergenic |
| ATTTATCTGTTGCTCGGCCA+GGG | 0.407400 | 1.1:-1584896 | None:intergenic |
| CTAGTGATCCCCAGAAAATC+AGG | 0.410458 | 1.1:+1586313 | MS.gene27264:CDS |
| TTGTATGCCATCGCCACTTA+AGG | 0.410809 | 1.1:-1586376 | None:intergenic |
| GGTGAAGTTAGTGATTCATT+TGG | 0.426485 | 1.1:+1581467 | MS.gene27264:CDS |
| AACCATTCCAACTTGGTGTA+TGG | 0.431181 | 1.1:-1586591 | None:intergenic |
| ATGAAATGCGCATGCGTTAA+CGG | 0.432671 | 1.1:+1580371 | MS.gene27264:CDS |
| GTTAAGAGAGAAAGAGGATA+AGG | 0.435361 | 1.1:-1580513 | None:intergenic |
| ACCTGTGCCTGTGGTATCCT+TGG | 0.436714 | 1.1:+1583913 | MS.gene27264:CDS |
| AGTAGTGGCTTTATCTTCAT+CGG | 0.441482 | 1.1:-1580645 | None:intergenic |
| CCAGAGCCAATGTACGTCCT+AGG | 0.441800 | 1.1:-1582542 | None:intergenic |
| GTAGTGGCTTTATCTTCATC+GGG | 0.443213 | 1.1:-1580644 | None:intergenic |
| GGAGGACAGGTGAAGGGAAT+GGG | 0.443918 | 1.1:+1583558 | MS.gene27264:CDS |
| ATCTTTCTTACTAGTGTAGT+AGG | 0.445633 | 1.1:-1584560 | None:intergenic |
| GTACTGAGAGACGCCGATTA+CGG | 0.446417 | 1.1:-1583892 | None:intergenic |
| TAAGAGTGCAATTAATGCAT+TGG | 0.446596 | 1.1:+1582580 | MS.gene27264:CDS |
| CAGAAAATCAGGCTAGAAGC+TGG | 0.447370 | 1.1:+1586324 | MS.gene27264:CDS |
| TTCTTGAATTGGAAGTAAAA+CGG | 0.449115 | 1.1:-1580603 | None:intergenic |
| GGTACACACAGTTGTCTCAT+AGG | 0.449520 | 1.1:-1586809 | None:intergenic |
| GCTTTATCTTCATCGGGAGT+TGG | 0.450309 | 1.1:-1580638 | None:intergenic |
| TGGAAGTAAAACGGCGTCGT+TGG | 0.454503 | 1.1:-1580594 | None:intergenic |
| TAGGTTGGTTATACGAATGC+TGG | 0.454748 | 1.1:+1584036 | MS.gene27264:intron |
| CACAGCATTTATCTGTTGCT+CGG | 0.455772 | 1.1:-1584902 | None:intergenic |
| TTGTTCCAAACCATCAACTT+TGG | 0.473073 | 1.1:-1584961 | None:intergenic |
| ACTCACCTTGAGCGTCAATC+AGG | 0.473830 | 1.1:+1583537 | MS.gene27264:CDS |
| TTTGATGATGAGCTATCAGC+TGG | 0.475329 | 1.1:+1582620 | MS.gene27264:CDS |
| TTTAACAGGACTCCATGGTA+TGG | 0.475571 | 1.1:+1586525 | MS.gene27264:intron |
| AGGAGGACAGGTGAAGGGAA+TGG | 0.488898 | 1.1:+1583557 | MS.gene27264:CDS |
| CTCCTCCAGTGTGGCTCTGA+AGG | 0.489626 | 1.1:-1584705 | None:intergenic |
| ACCTGTACTCTCCTTGTAGT+TGG | 0.491218 | 1.1:-1584132 | None:intergenic |
| TTATCTTCATCGGGAGTTGG+AGG | 0.492319 | 1.1:-1580635 | None:intergenic |
| TCCTAGGCAACTGCGCAACC+TGG | 0.497117 | 1.1:+1583036 | MS.gene27264:intron |
| GCAACTGCGCAACCTGGAAA+AGG | 0.498140 | 1.1:+1583042 | MS.gene27264:CDS |
| TTTCTTATGGCAGATTGATA+GGG | 0.500022 | 1.1:+1586290 | MS.gene27264:intron |
| CTCGCTGATTAAATATATCA+AGG | 0.502133 | 1.1:-1583108 | None:intergenic |
| AACAAACCTCTCTTCCGTTA+CGG | 0.507246 | 1.1:-1580739 | None:intergenic |
| TGCGCATGCGTTAACGGTGG+TGG | 0.508686 | 1.1:+1580377 | MS.gene27264:CDS |
| AAAGTTGATGGTTTGGAACA+AGG | 0.512730 | 1.1:+1584963 | MS.gene27264:CDS |
| TTCCGTTACGGAGCTTGAAG+CGG | 0.515448 | 1.1:-1580727 | None:intergenic |
| GAGCAGTTAGCTGATACTGC+TGG | 0.517824 | 1.1:+1581515 | MS.gene27264:CDS |
| TCAATCAGGAGGACAGGTGA+AGG | 0.530450 | 1.1:+1583551 | MS.gene27264:CDS |
| CAACTTTAGATCCAACTACA+AGG | 0.530983 | 1.1:+1584121 | MS.gene27264:CDS |
| TTAACAGGACTCCATGGTAT+GGG | 0.535370 | 1.1:+1586526 | MS.gene27264:intron |
| TATTCTTTAACAGGACTCCA+TGG | 0.536002 | 1.1:+1586520 | MS.gene27264:intron |
| AAGCAACCTCGCAAAACGTA+GGG | 0.539631 | 1.1:-1586783 | None:intergenic |
| TGTAACGTTAAGAGAGAAAG+AGG | 0.539755 | 1.1:-1580519 | None:intergenic |
| CCTAGGACGTACATTGGCTC+TGG | 0.544137 | 1.1:+1582542 | MS.gene27264:CDS |
| AGTTGCAAATAGTTTATCCT+CGG | 0.544687 | 1.1:-1584103 | None:intergenic |
| TGCGGCCTTCAGAGCCACAC+TGG | 0.551739 | 1.1:+1584700 | MS.gene27264:CDS |
| CGAGCAAGGGACATATATCA+AGG | 0.553171 | 1.1:+1586751 | MS.gene27264:CDS |
| AACCGCTTCAAGCTCCGTAA+CGG | 0.554129 | 1.1:+1580725 | MS.gene27264:CDS |
| TGAGCGTCAATCAGGAGGAC+AGG | 0.558310 | 1.1:+1583545 | MS.gene27264:CDS |
| TTTGTTACCATTTGAAAATG+GGG | 0.559718 | 1.1:+1586556 | MS.gene27264:CDS |
| CACCATACACCAAGTTGGAA+TGG | 0.561527 | 1.1:+1586589 | MS.gene27264:CDS |
| CAGAGCCAATGTACGTCCTA+GGG | 0.562024 | 1.1:-1582541 | None:intergenic |
| CTGGTTGGTGTTGAGAGAAA+AGG | 0.565144 | 1.1:+1581446 | MS.gene27264:CDS |
| ATATAGGAATATACCGAGCA+AGG | 0.568191 | 1.1:+1586737 | MS.gene27264:intron |
| ACCAAGGATACCACAGGCAC+AGG | 0.571154 | 1.1:-1583914 | None:intergenic |
| CTTGGTGTATGGTGCTGAGA+AGG | 0.572248 | 1.1:-1586580 | None:intergenic |
| TGCAGTTCAAGACAAACTAA+AGG | 0.573803 | 1.1:+1586410 | MS.gene27264:CDS |
| CTCAGCACCATACACCAAGT+TGG | 0.574248 | 1.1:+1586584 | MS.gene27264:CDS |
| TGTCCAGATGAAGAATGGAA+AGG | 0.575689 | 1.1:+1584496 | MS.gene27264:intron |
| TTTATCTGTTGCTCGGCCAG+GGG | 0.576253 | 1.1:-1584895 | None:intergenic |
| TCCAACTACAAGGAGAGTAC+AGG | 0.576741 | 1.1:+1584131 | MS.gene27264:CDS |
| GAAGAGAAAGCGTATCTGGT+TGG | 0.578497 | 1.1:+1581431 | MS.gene27264:CDS |
| GTCCTCCTGATTGACGCTCA+AGG | 0.579237 | 1.1:-1583542 | None:intergenic |
| GTTTAAGAAAGTTAAGGTCG+TGG | 0.579779 | 1.1:-1586830 | None:intergenic |
| GTATGCATATCTGCCTTAAG+TGG | 0.586670 | 1.1:+1586363 | MS.gene27264:CDS |
| CTTGATATATGTCCCTTGCT+CGG | 0.592539 | 1.1:-1586750 | None:intergenic |
| ATATCTGCCTTAAGTGGCGA+TGG | 0.598505 | 1.1:+1586369 | MS.gene27264:CDS |
| CCAAACCCTAGGACGTACAT+TGG | 0.607208 | 1.1:+1582536 | MS.gene27264:CDS |
| CAAGCTCCGTAACGGAAGAG+AGG | 0.609194 | 1.1:+1580733 | MS.gene27264:CDS |
| TATAGGAATATACCGAGCAA+GGG | 0.610221 | 1.1:+1586738 | MS.gene27264:intron |
| TTTCTCCTAACAGACACTGT+TGG | 0.614231 | 1.1:+1584521 | MS.gene27264:CDS |
| GGTATACTTCTGGTAAGTAG+AGG | 0.616128 | 1.1:-1581552 | None:intergenic |
| TTATCTGTTGCTCGGCCAGG+GGG | 0.617915 | 1.1:-1584894 | None:intergenic |
| ACAGGACTCCATGGTATGGG+TGG | 0.618988 | 1.1:+1586529 | MS.gene27264:intron |
| CAATCAGGAGGACAGGTGAA+GGG | 0.620912 | 1.1:+1583552 | MS.gene27264:CDS |
| GATTTCAATTTCAACAACAA+CGG | 0.622908 | 1.1:+1580444 | MS.gene27264:CDS |
| CAAAGCTTCCACCCATACCA+TGG | 0.623436 | 1.1:-1586537 | None:intergenic |
| GGCTTGCTTCTCCAAACCCT+AGG | 0.630711 | 1.1:+1582525 | MS.gene27264:intron |
| TAAGCAACCTCGCAAAACGT+AGG | 0.630872 | 1.1:-1586784 | None:intergenic |
| AAACTAACCAAGGATACCAC+AGG | 0.635397 | 1.1:-1583920 | None:intergenic |
| CACCTTGAGCGTCAATCAGG+AGG | 0.636726 | 1.1:+1583540 | MS.gene27264:CDS |
| GGCCTTCAGAGCCACACTGG+AGG | 0.640849 | 1.1:+1584703 | MS.gene27264:CDS |
| TGGAGCAGATGTTCTTGCCG+AGG | 0.641917 | 1.1:+1584086 | MS.gene27264:CDS |
| TGAAGTTCTTCAGTGTTGTG+CGG | 0.644930 | 1.1:-1580542 | None:intergenic |
| TTCTGATATCTCCTCCAGTG+TGG | 0.648550 | 1.1:-1584714 | None:intergenic |
| TGATATATTTAATCAGCGAG+CGG | 0.651334 | 1.1:+1583111 | MS.gene27264:CDS |
| TCTCTCAGTACCTGTGCCTG+TGG | 0.654803 | 1.1:+1583904 | MS.gene27264:CDS |
| CGAGCAACAGATAAATGCTG+TGG | 0.680751 | 1.1:+1584903 | MS.gene27264:CDS |
| TTGATGATGAGCTATCAGCT+GGG | 0.694886 | 1.1:+1582621 | MS.gene27264:CDS |
| AGCAACCTCGCAAAACGTAG+GGG | 0.703684 | 1.1:-1586782 | None:intergenic |
| AAATGCGCATGCGTTAACGG+TGG | 0.787822 | 1.1:+1580374 | MS.gene27264:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAAACAAAAAATAAGA+TGG | - | chr1.1:1583355-1583374 | None:intergenic | 10.0% |
| !! | TAATAACACAATATATAATT+CGG | - | chr1.1:1583392-1583411 | None:intergenic | 10.0% |
| !!! | TTATTTTTTGACATTATTTA+CGG | + | chr1.1:1584635-1584654 | MS.gene27264:intron | 10.0% |
| !! | AAAATATAAGAGAAACTATT+TGG | + | chr1.1:1586020-1586039 | MS.gene27264:intron | 15.0% |
| !! | AAATATAAGAGAAACTATTT+GGG | + | chr1.1:1586021-1586040 | MS.gene27264:intron | 15.0% |
| !! | AAATTCTATTATTCTTTAAC+AGG | + | chr1.1:1586511-1586530 | MS.gene27264:intron | 15.0% |
| !! | AATAACACAATATATAATTC+GGG | - | chr1.1:1583391-1583410 | None:intergenic | 15.0% |
| !! | ATAAAAATGTAATATTATCC+AGG | - | chr1.1:1584171-1584190 | None:intergenic | 15.0% |
| !! | ATATAAACATAAAATACCAT+AGG | - | chr1.1:1583267-1583286 | None:intergenic | 15.0% |
| !! | ATATTTCTCATCAAAAAAAA+AGG | - | chr1.1:1585112-1585131 | None:intergenic | 15.0% |
| !! | CAGGTAATTATAAATTAAAA+AGG | + | chr1.1:1583154-1583173 | MS.gene27264:intron | 15.0% |
| !! | GATGATAATTATTAATTGAA+GGG | + | chr1.1:1582309-1582328 | MS.gene27264:intron | 15.0% |
| !! | GTAATTATAAATTAAAAAGG+AGG | + | chr1.1:1583157-1583176 | MS.gene27264:intron | 15.0% |
| !! | TAACTTATATGAAAACAATT+TGG | - | chr1.1:1581812-1581831 | None:intergenic | 15.0% |
| !! | TGATGATAATTATTAATTGA+AGG | + | chr1.1:1582308-1582327 | MS.gene27264:intron | 15.0% |
| !! | TGTTATGAATAGAATTAATT+CGG | - | chr1.1:1585154-1585173 | None:intergenic | 15.0% |
| !! | TTATAAGAAAAAAAGTTCTA+GGG | - | chr1.1:1583794-1583813 | None:intergenic | 15.0% |
| !! | TTTATAAGAAAAAAAGTTCT+AGG | - | chr1.1:1583795-1583814 | None:intergenic | 15.0% |
| !!! | AAATTGTAATAGTTTTGATT+CGG | + | chr1.1:1581395-1581414 | MS.gene27264:intron | 15.0% |
| !!! | TAAATGATGATATAGAATTT+TGG | - | chr1.1:1584308-1584327 | None:intergenic | 15.0% |
| !! | AAACATCTAATAGATTGAAA+TGG | - | chr1.1:1580801-1580820 | None:intergenic | 20.0% |
| !! | AATAACTGTTGATCAATATT+TGG | + | chr1.1:1583196-1583215 | MS.gene27264:intron | 20.0% |
| !! | ACTTATGATATAGCATTTAA+TGG | - | chr1.1:1581732-1581751 | None:intergenic | 20.0% |
| !! | AGATCATCATTATTGTTTAT+TGG | + | chr1.1:1585654-1585673 | MS.gene27264:intron | 20.0% |
| !! | AGTTACAACAATAATTAGTT+AGG | + | chr1.1:1580853-1580872 | MS.gene27264:intron | 20.0% |
| !! | ATAACACAATATATAATTCG+GGG | - | chr1.1:1583390-1583409 | None:intergenic | 20.0% |
| !! | ATTAAGAAAAGAATAGAAGT+TGG | - | chr1.1:1584274-1584293 | None:intergenic | 20.0% |
| !! | GAATTCATTATAAAACTTGA+AGG | - | chr1.1:1585041-1585060 | None:intergenic | 20.0% |
| !! | GATCATCATTATTGTTTATT+GGG | + | chr1.1:1585655-1585674 | MS.gene27264:intron | 20.0% |
| !! | TGGATCTATAAAAAACATAA+AGG | - | chr1.1:1582879-1582898 | None:intergenic | 20.0% |
| !!! | ACTTTTAATTTTCAGTAAGA+AGG | + | chr1.1:1582810-1582829 | MS.gene27264:intron | 20.0% |
| !!! | ATGTAAATAGTTCTAACAAA+TGG | - | chr1.1:1586481-1586500 | None:intergenic | 20.0% |
| !!! | GAATTGATTTTAAAGCATTA+TGG | - | chr1.1:1585687-1585706 | None:intergenic | 20.0% |
| !!! | GTTACAATTTATTTTGCTTT+GGG | + | chr1.1:1584589-1584608 | MS.gene27264:intron | 20.0% |
| !!! | GTTTCTCTTATATTTTTTCT+AGG | - | chr1.1:1586016-1586035 | None:intergenic | 20.0% |
| !!! | GTTTTCTTATTTGTTATTGT+TGG | + | chr1.1:1586688-1586707 | MS.gene27264:intron | 20.0% |
| !!! | TAATTGTTGTTTACATGAAA+CGG | - | chr1.1:1581320-1581339 | None:intergenic | 20.0% |
| !!! | TGAGGATTTGTTTAAAAATT+TGG | + | chr1.1:1582757-1582776 | MS.gene27264:intron | 20.0% |
| !!! | TGTTACAATTTATTTTGCTT+TGG | + | chr1.1:1584588-1584607 | MS.gene27264:intron | 20.0% |
| !!! | TTAGAACTATTTACATTTTC+TGG | + | chr1.1:1586485-1586504 | MS.gene27264:intron | 20.0% |
| !!! | TTTCAAGTTTTCACATAAAT+TGG | + | chr1.1:1581686-1581705 | MS.gene27264:intron | 20.0% |
| ! | AAAACCTATACCACATTATT+TGG | + | chr1.1:1585179-1585198 | MS.gene27264:intron | 25.0% |
| ! | AAACCTATACCACATTATTT+GGG | + | chr1.1:1585180-1585199 | MS.gene27264:intron | 25.0% |
| ! | AACCAAACTCACAATAAAAA+TGG | - | chr1.1:1582195-1582214 | None:intergenic | 25.0% |
| ! | AATAAAAATGGAACTATGGT+TGG | - | chr1.1:1582183-1582202 | None:intergenic | 25.0% |
| ! | ACTAGTAGGTTAAGTTAAAT+TGG | + | chr1.1:1580990-1581009 | MS.gene27264:intron | 25.0% |
| ! | AGACTTAATCTAAATGTTAC+AGG | + | chr1.1:1582504-1582523 | MS.gene27264:intron | 25.0% |
| ! | AGCAAAATAAATTGTAACAG+AGG | - | chr1.1:1584587-1584606 | None:intergenic | 25.0% |
| ! | ATAAAAATGGAACTATGGTT+GGG | - | chr1.1:1582182-1582201 | None:intergenic | 25.0% |
| ! | ATATTGATCAACAGTTATTC+AGG | - | chr1.1:1583195-1583214 | None:intergenic | 25.0% |
| ! | ATTTAATGGAGTTGTTAATC+TGG | - | chr1.1:1581718-1581737 | None:intergenic | 25.0% |
| ! | CAATAATTAGTTACACTAGT+AGG | + | chr1.1:1580976-1580995 | MS.gene27264:intron | 25.0% |
| ! | CTTACATTACCATAATACAA+AGG | - | chr1.1:1583977-1583996 | None:intergenic | 25.0% |
| ! | CTTATAAACATCTAATGCAT+GGG | + | chr1.1:1583807-1583826 | MS.gene27264:intron | 25.0% |
| ! | CTTTGTTACCATTTGAAAAT+GGG | + | chr1.1:1586555-1586574 | MS.gene27264:CDS | 25.0% |
| ! | GAAATATGCAGTTAGAAAAA+AGG | - | chr1.1:1582653-1582672 | None:intergenic | 25.0% |
| ! | GATAATAATGTATGCTTACT+TGG | - | chr1.1:1583623-1583642 | None:intergenic | 25.0% |
| ! | GATTTCAATTTCAACAACAA+CGG | + | chr1.1:1580444-1580463 | MS.gene27264:CDS | 25.0% |
| ! | GCAATATCAGTCTAAAAAAA+TGG | - | chr1.1:1583955-1583974 | None:intergenic | 25.0% |
| ! | GCATATATCATCATCTTATA+AGG | - | chr1.1:1584000-1584019 | None:intergenic | 25.0% |
| ! | GCATTTATATGTCAATTAAG+TGG | - | chr1.1:1583231-1583250 | None:intergenic | 25.0% |
| ! | GTTCTATCATAAACCATATT+TGG | - | chr1.1:1586058-1586077 | None:intergenic | 25.0% |
| ! | TATATATCAGTAGAAGTTCT+AGG | + | chr1.1:1584771-1584790 | MS.gene27264:intron | 25.0% |
| ! | TATCCGAATCATATTAAAAC+AGG | - | chr1.1:1586449-1586468 | None:intergenic | 25.0% |
| ! | TCAAAGCTAGTAAACATAAA+TGG | - | chr1.1:1582700-1582719 | None:intergenic | 25.0% |
| ! | TCACAATAAAAATGGAACTA+TGG | - | chr1.1:1582187-1582206 | None:intergenic | 25.0% |
| ! | TCTTATAAACATCTAATGCA+TGG | + | chr1.1:1583806-1583825 | MS.gene27264:intron | 25.0% |
| ! | TGCAACTTCAATTTCAAATT+TGG | + | chr1.1:1581591-1581610 | MS.gene27264:intron | 25.0% |
| ! | TGGTTTATGATAGAACATTA+TGG | + | chr1.1:1586062-1586081 | MS.gene27264:intron | 25.0% |
| ! | TTCCAGTAAAATAATCACTT+TGG | - | chr1.1:1581664-1581683 | None:intergenic | 25.0% |
| ! | TTCTTGAATTGGAAGTAAAA+CGG | - | chr1.1:1580606-1580625 | None:intergenic | 25.0% |
| ! | TTGACATATAAATGCAAAAG+AGG | + | chr1.1:1583236-1583255 | MS.gene27264:intron | 25.0% |
| ! | TTTGTTACCATTTGAAAATG+GGG | + | chr1.1:1586556-1586575 | MS.gene27264:CDS | 25.0% |
| !! | ATTTTATCGGATTCGTATAT+AGG | + | chr1.1:1586721-1586740 | MS.gene27264:intron | 25.0% |
| !! | ATTTTTATTGTGAGTTTGGT+TGG | + | chr1.1:1582194-1582213 | MS.gene27264:intron | 25.0% |
| !! | TACTTGAATTAGCTTATCAT+AGG | + | chr1.1:1581118-1581137 | MS.gene27264:intron | 25.0% |
| !! | TTTAAAATCTCTTTGCATTG+TGG | + | chr1.1:1581905-1581924 | MS.gene27264:intron | 25.0% |
| !!! | AAGCCTGTTTTAATATGATT+CGG | + | chr1.1:1586443-1586462 | MS.gene27264:intron | 25.0% |
| !!! | AATGCTTTAAAATCAATTCC+TGG | + | chr1.1:1585688-1585707 | MS.gene27264:intron | 25.0% |
| !!! | ATCTGCTATTTTTTAGCAAA+TGG | - | chr1.1:1581023-1581042 | None:intergenic | 25.0% |
| !!! | CTAGGAGTCATTTTATTTAT+CGG | + | chr1.1:1584789-1584808 | MS.gene27264:intron | 25.0% |
| !!! | CTTTTTTTTAAGCTTAGTAG+TGG | - | chr1.1:1580663-1580682 | None:intergenic | 25.0% |
| !!! | TAGCTTTGATTTGAGATAAT+TGG | + | chr1.1:1582711-1582730 | MS.gene27264:intron | 25.0% |
| !!! | TAGGAGTCATTTTATTTATC+GGG | + | chr1.1:1584790-1584809 | MS.gene27264:intron | 25.0% |
| !!! | TCATTTTATTTATCGGGAAA+AGG | + | chr1.1:1584796-1584815 | MS.gene27264:intron | 25.0% |
| !!! | TTCCATTTTTATTGTGAGTT+TGG | + | chr1.1:1582190-1582209 | MS.gene27264:intron | 25.0% |
| !!! | TTGTTTTTGCAGTTTAGAAT+GGG | - | chr1.1:1585416-1585435 | None:intergenic | 25.0% |
| !!! | TTTAATTTTCAGTAAGAAGG+CGG | + | chr1.1:1582813-1582832 | MS.gene27264:intron | 25.0% |
| !!! | TTTGTTTTTGCAGTTTAGAA+TGG | - | chr1.1:1585417-1585436 | None:intergenic | 25.0% |
| AAAAAGAGCTAGAATCTGTT+AGG | + | chr1.1:1583852-1583871 | MS.gene27264:CDS | 30.0% | |
| AAAATAAGCTTAGGTGGTTT+GGG | + | chr1.1:1585906-1585925 | MS.gene27264:intron | 30.0% | |
| AAACTGCAATAGTTGTGTAA+AGG | - | chr1.1:1585016-1585035 | None:intergenic | 30.0% | |
| AACTACTAACTAACTGGTTA+AGG | - | chr1.1:1580837-1580856 | None:intergenic | 30.0% | |
| AAGAAGAAATGGTATACTTC+TGG | - | chr1.1:1581565-1581584 | None:intergenic | 30.0% | |
| AAGAGAAAAACTTGAGCTTA+TGG | - | chr1.1:1581231-1581250 | None:intergenic | 30.0% | |
| AGAAACTATTTGGGAAGATT+TGG | + | chr1.1:1586030-1586049 | MS.gene27264:intron | 30.0% | |
| AGAAGAAATAAGCATGTGAA+TGG | - | chr1.1:1585524-1585543 | None:intergenic | 30.0% | |
| AGAAGATTCTTTGAGTGAAT+TGG | + | chr1.1:1581493-1581512 | MS.gene27264:CDS | 30.0% | |
| AGTCACTCTGTTAATTCTTT+AGG | + | chr1.1:1586184-1586203 | MS.gene27264:intron | 30.0% | |
| AGTTGCAAATAGTTTATCCT+CGG | - | chr1.1:1584106-1584125 | None:intergenic | 30.0% | |
| ATATGCACAATGTATGAAAC+TGG | - | chr1.1:1583745-1583764 | None:intergenic | 30.0% | |
| ATCATCAATTCCAAAGTTGA+TGG | + | chr1.1:1584951-1584970 | MS.gene27264:CDS | 30.0% | |
| ATCGAAACATATACTGATCA+AGG | - | chr1.1:1581346-1581365 | None:intergenic | 30.0% | |
| ATCTTTCTTACTAGTGTAGT+AGG | - | chr1.1:1584563-1584582 | None:intergenic | 30.0% | |
| CAATTTCATCCCAAATAATG+TGG | - | chr1.1:1585192-1585211 | None:intergenic | 30.0% | |
| CACATTAAAGACATTGAAAC+AGG | + | chr1.1:1581931-1581950 | MS.gene27264:intron | 30.0% | |
| CATTGCACAATATTGTTTAC+AGG | + | chr1.1:1582357-1582376 | MS.gene27264:intron | 30.0% | |
| CATTGTCAAATTTATCTGCA+AGG | + | chr1.1:1583647-1583666 | MS.gene27264:intron | 30.0% | |
| CTGATATTGCCTTTGTATTA+TGG | + | chr1.1:1583965-1583984 | MS.gene27264:intron | 30.0% | |
| CTGATTGAATTTGTAGTCTT+TGG | + | chr1.1:1581076-1581095 | MS.gene27264:intron | 30.0% | |
| GAATTAATTCGGAGTTAACA+AGG | - | chr1.1:1585143-1585162 | None:intergenic | 30.0% | |
| GAGAACAAAGACATGATTAT+TGG | - | chr1.1:1582393-1582412 | None:intergenic | 30.0% | |
| GTATAACCAACCTAAAATGA+TGG | - | chr1.1:1584030-1584049 | None:intergenic | 30.0% | |
| TAAAGACATTGAAACAGGAT+TGG | + | chr1.1:1581936-1581955 | MS.gene27264:intron | 30.0% | |
| TAGTACATAGATATCGTATC+CGG | + | chr1.1:1581616-1581635 | MS.gene27264:intron | 30.0% | |
| TATAGTTGCATTGTTGTGTA+AGG | + | chr1.1:1582970-1582989 | MS.gene27264:intron | 30.0% | |
| TCAACAATGAAACAATGTCT+AGG | - | chr1.1:1584200-1584219 | None:intergenic | 30.0% | |
| TCATATAGCCAAAAAGAAAG+CGG | - | chr1.1:1582049-1582068 | None:intergenic | 30.0% | |
| TGAAACTGAGTCATATGATA+TGG | - | chr1.1:1582485-1582504 | None:intergenic | 30.0% | |
| TGATATATTTAATCAGCGAG+CGG | + | chr1.1:1583111-1583130 | MS.gene27264:CDS | 30.0% | |
| TGCTCTACTTTACATTGTAT+CGG | + | chr1.1:1582907-1582926 | MS.gene27264:intron | 30.0% | |
| TGTTGTAACTACTAACTAAC+TGG | - | chr1.1:1580843-1580862 | None:intergenic | 30.0% | |
| TTATGAACAAGCTATCCTAA+AGG | - | chr1.1:1585332-1585351 | None:intergenic | 30.0% | |
| TTGCAGAGTAAAAGAAGAAA+TGG | - | chr1.1:1581576-1581595 | None:intergenic | 30.0% | |
| TTGTTCATCAGTTTCTCATA+AGG | + | chr1.1:1585754-1585773 | MS.gene27264:intron | 30.0% | |
| TTGTTGTAACAAACTGCTAT+TGG | - | chr1.1:1580931-1580950 | None:intergenic | 30.0% | |
| TTTCTTATGGCAGATTGATA+GGG | + | chr1.1:1586290-1586309 | MS.gene27264:intron | 30.0% | |
| ! | ACGCTTTTGAATCAATTAAC+TGG | + | chr1.1:1584066-1584085 | MS.gene27264:CDS | 30.0% |
| ! | ATTTTATGCGAGATTCAGAA+TGG | - | chr1.1:1583000-1583019 | None:intergenic | 30.0% |
| ! | CTCGCTGATTAAATATATCA+AGG | - | chr1.1:1583111-1583130 | None:intergenic | 30.0% |
| ! | GACTAGTTAGTTGTACTTAT+TGG | + | chr1.1:1581271-1581290 | MS.gene27264:intron | 30.0% |
| ! | GATATCAGAATCATCACTTT+TGG | + | chr1.1:1584727-1584746 | MS.gene27264:CDS | 30.0% |
| ! | GCTTTGTTACCATTTGAAAA+TGG | + | chr1.1:1586554-1586573 | MS.gene27264:CDS | 30.0% |
| ! | TAAGAGTGCAATTAATGCAT+TGG | + | chr1.1:1582580-1582599 | MS.gene27264:CDS | 30.0% |
| ! | TCTGGCATATCTTTTTCTTA+TGG | + | chr1.1:1586277-1586296 | MS.gene27264:intron | 30.0% |
| ! | TGAAATTGTCATTTACGTCA+AGG | + | chr1.1:1585204-1585223 | MS.gene27264:intron | 30.0% |
| ! | TGCTTATTTGCCATCATTTT+AGG | + | chr1.1:1584017-1584036 | MS.gene27264:intron | 30.0% |
| ! | TGGATTTCCTGACATTTTAT+CGG | + | chr1.1:1586708-1586727 | MS.gene27264:intron | 30.0% |
| ! | TTCACATGCTTATTTCTTCT+AGG | + | chr1.1:1585524-1585543 | MS.gene27264:intron | 30.0% |
| ! | TTTTCTTATGGCAGATTGAT+AGG | + | chr1.1:1586289-1586308 | MS.gene27264:intron | 30.0% |
| !! | CACCAAAGTGATTATTTTAC+TGG | + | chr1.1:1581659-1581678 | MS.gene27264:intron | 30.0% |
| !! | GTGCATATCTCTAAAATTTG+TGG | + | chr1.1:1583757-1583776 | MS.gene27264:intron | 30.0% |
| !! | TATTTGCCATCATTTTAGGT+TGG | + | chr1.1:1584021-1584040 | MS.gene27264:intron | 30.0% |
| !! | TGTTTTTGCAGTTTAGAATG+GGG | - | chr1.1:1585415-1585434 | None:intergenic | 30.0% |
| !!! | ATAGTTTTGATTCGGTTTGT+AGG | + | chr1.1:1581403-1581422 | MS.gene27264:intron | 30.0% |
| !!! | TCTACCTTCTTTTGATTTCT+AGG | + | chr1.1:1583464-1583483 | MS.gene27264:intron | 30.0% |
| !!! | TGCTATTTTTTAGCAAATGG+AGG | - | chr1.1:1581020-1581039 | None:intergenic | 30.0% |
| AACCTGAAATATTCCACTTC+CGG | - | chr1.1:1581638-1581657 | None:intergenic | 35.0% | |
| ACCTATAGTAGAAAAGATGG+TGG | + | chr1.1:1585883-1585902 | MS.gene27264:intron | 35.0% | |
| AGCACCTATAGTAGAAAAGA+TGG | + | chr1.1:1585880-1585899 | MS.gene27264:intron | 35.0% | |
| AGTATAAGCAAGCGATTGTT+TGG | + | chr1.1:1582785-1582804 | MS.gene27264:intron | 35.0% | |
| AGTCAGATTACAAGAGATAG+AGG | + | chr1.1:1585986-1586005 | MS.gene27264:intron | 35.0% | |
| ATATAGGAATATACCGAGCA+AGG | + | chr1.1:1586737-1586756 | MS.gene27264:intron | 35.0% | |
| ATCAGTAATGTCTCCATCAT+TGG | - | chr1.1:1582245-1582264 | None:intergenic | 35.0% | |
| ATGGAGTTGTTAATCTGGAT+AGG | - | chr1.1:1581713-1581732 | None:intergenic | 35.0% | |
| CAACTTTAGATCCAACTACA+AGG | + | chr1.1:1584121-1584140 | MS.gene27264:CDS | 35.0% | |
| CACTCTGTTAATTCTTTAGG+AGG | + | chr1.1:1586187-1586206 | MS.gene27264:intron | 35.0% | |
| CAGGTCAGTAAAAAATTACC+TGG | + | chr1.1:1584150-1584169 | MS.gene27264:intron | 35.0% | |
| CATCCCAAATAATGTGGTAT+AGG | - | chr1.1:1585186-1585205 | None:intergenic | 35.0% | |
| GAAAATAAGCTTAGGTGGTT+TGG | + | chr1.1:1585905-1585924 | MS.gene27264:intron | 35.0% | |
| GCAACCTAGAAATCAAAAGA+AGG | - | chr1.1:1583471-1583490 | None:intergenic | 35.0% | |
| GCATGACAATAAACAACAAC+AGG | - | chr1.1:1582017-1582036 | None:intergenic | 35.0% | |
| GGAAGATTTGGATCCAAATA+TGG | + | chr1.1:1586042-1586061 | MS.gene27264:intron | 35.0% | |
| GGAGATGATTGTTCTTGAAT+TGG | - | chr1.1:1580617-1580636 | None:intergenic | 35.0% | |
| GGGTGAAAAACAAATAGAAG+TGG | + | chr1.1:1583578-1583597 | MS.gene27264:CDS | 35.0% | |
| GGTGAAGTTAGTGATTCATT+TGG | + | chr1.1:1581467-1581486 | MS.gene27264:CDS | 35.0% | |
| GTTAAGAGAGAAAGAGGATA+AGG | - | chr1.1:1580516-1580535 | None:intergenic | 35.0% | |
| GTTGTTACTGTTATCGTTGT+TGG | - | chr1.1:1580699-1580718 | None:intergenic | 35.0% | |
| TAAAACCAACAGTGTCTGTT+AGG | - | chr1.1:1584529-1584548 | None:intergenic | 35.0% | |
| TACACTGATCCATTTGTCTT+CGG | - | chr1.1:1585444-1585463 | None:intergenic | 35.0% | |
| TACCTCGTCTAACAAAAATG+TGG | + | chr1.1:1583514-1583533 | MS.gene27264:CDS | 35.0% | |
| TACGAATCCGATAAAATGTC+AGG | - | chr1.1:1586718-1586737 | None:intergenic | 35.0% | |
| TAGAAGAACTAGACAACTTC+TGG | + | chr1.1:1584823-1584842 | MS.gene27264:intron | 35.0% | |
| TATAGGAATATACCGAGCAA+GGG | + | chr1.1:1586738-1586757 | MS.gene27264:intron | 35.0% | |
| TATGCATAAAGTAAGCGTAG+CGG | + | chr1.1:1585781-1585800 | MS.gene27264:intron | 35.0% | |
| TATTCTTTAACAGGACTCCA+TGG | + | chr1.1:1586520-1586539 | MS.gene27264:intron | 35.0% | |
| TCAACAGTTATTCAGGATAC+TGG | - | chr1.1:1583188-1583207 | None:intergenic | 35.0% | |
| TCAGTAATGTCTCCATCATT+GGG | - | chr1.1:1582244-1582263 | None:intergenic | 35.0% | |
| TCTCCTTACTACAGAATCTA+CGG | - | chr1.1:1585948-1585967 | None:intergenic | 35.0% | |
| TGCAGTTCAAGACAAACTAA+AGG | + | chr1.1:1586410-1586429 | MS.gene27264:CDS | 35.0% | |
| TGGAGTTGTTAATCTGGATA+GGG | - | chr1.1:1581712-1581731 | None:intergenic | 35.0% | |
| TGTAACGTTAAGAGAGAAAG+AGG | - | chr1.1:1580522-1580541 | None:intergenic | 35.0% | |
| TTGTTCCAAACCATCAACTT+TGG | - | chr1.1:1584964-1584983 | None:intergenic | 35.0% | |
| ! | AACACATGAAGCATCTTTAC+AGG | + | chr1.1:1583135-1583154 | MS.gene27264:CDS | 35.0% |
| ! | AATATGATTCGGATATCGTG+TGG | + | chr1.1:1586454-1586473 | MS.gene27264:intron | 35.0% |
| ! | AGAAGGTAGAGTATCAGAAT+AGG | - | chr1.1:1583454-1583473 | None:intergenic | 35.0% |
| ! | ATGGTTTGGAACAAGGTATT+GGG | + | chr1.1:1584970-1584989 | MS.gene27264:intron | 35.0% |
| ! | GAAGGTAGAGTATCAGAATA+GGG | - | chr1.1:1583453-1583472 | None:intergenic | 35.0% |
| ! | GTTGAATACCGCTTTCTTTT+TGG | + | chr1.1:1582038-1582057 | MS.gene27264:intron | 35.0% |
| ! | TAACTAGTCTAACTTAGTGC+AGG | - | chr1.1:1581260-1581279 | None:intergenic | 35.0% |
| ! | TCCACCATCTTTTCTACTAT+AGG | - | chr1.1:1585887-1585906 | None:intergenic | 35.0% |
| ! | TTATTTTCACGAGCTCATAG+TGG | - | chr1.1:1581144-1581163 | None:intergenic | 35.0% |
| ! | TTCCCTTTTTCTTCTCCTAT+CGG | + | chr1.1:1582447-1582466 | MS.gene27264:intron | 35.0% |
| ! | TTTTATCATCCCACAACCAA+GGG | - | chr1.1:1584366-1584385 | None:intergenic | 35.0% |
| ! | TTTTCTCAACCATTCCAACT+TGG | - | chr1.1:1586601-1586620 | None:intergenic | 35.0% |
| ! | TTTTTATCATCCCACAACCA+AGG | - | chr1.1:1584367-1584386 | None:intergenic | 35.0% |
| ! | TTTTTGTTAGACGAGGTAGT+TGG | - | chr1.1:1583512-1583531 | None:intergenic | 35.0% |
| !! | AAAGTTGATGGTTTGGAACA+AGG | + | chr1.1:1584963-1584982 | MS.gene27264:CDS | 35.0% |
| !! | AGATGGTGGAAAATAAGCTT+AGG | + | chr1.1:1585897-1585916 | MS.gene27264:intron | 35.0% |
| !! | AGTAGTGGCTTTATCTTCAT+CGG | - | chr1.1:1580648-1580667 | None:intergenic | 35.0% |
| !! | CAATTCCAAAGTTGATGGTT+TGG | + | chr1.1:1584956-1584975 | MS.gene27264:CDS | 35.0% |
| !! | GTTTTTGCAGTTTAGAATGG+GGG | - | chr1.1:1585414-1585433 | None:intergenic | 35.0% |
| !! | TATTGGGAAAATGGTGTTGT+TGG | + | chr1.1:1584986-1585005 | MS.gene27264:intron | 35.0% |
| !! | TCTTCTAGGATAGTTGATTC+AGG | + | chr1.1:1585538-1585557 | MS.gene27264:intron | 35.0% |
| !! | TCTTGTGTGGGTTGAATTTT+AGG | + | chr1.1:1584439-1584458 | MS.gene27264:intron | 35.0% |
| !! | TTTTGAAGAGAAAGCGTATC+TGG | + | chr1.1:1581427-1581446 | MS.gene27264:CDS | 35.0% |
| !! | TTTTTGCAGTTTAGAATGGG+GGG | - | chr1.1:1585413-1585432 | None:intergenic | 35.0% |
| !!! | AACTGCTTTTGGTTCAAAAC+TGG | + | chr1.1:1585717-1585736 | MS.gene27264:intron | 35.0% |
| AAACTAACCAAGGATACCAC+AGG | - | chr1.1:1583923-1583942 | None:intergenic | 40.0% | |
| AACAAACCTCTCTTCCGTTA+CGG | - | chr1.1:1580742-1580761 | None:intergenic | 40.0% | |
| AATTCAACCCACACAAGACT+CGG | - | chr1.1:1584437-1584456 | None:intergenic | 40.0% | |
| ACAAATCAGCCGAAGACAAA+TGG | + | chr1.1:1585432-1585451 | MS.gene27264:intron | 40.0% | |
| ACTCCTTTCCATTCTTCATC+TGG | - | chr1.1:1584502-1584521 | None:intergenic | 40.0% | |
| AGCTGATACTGCTGGATTAT+TGG | + | chr1.1:1581523-1581542 | MS.gene27264:CDS | 40.0% | |
| AGTAAGGAGAGTAGATCAGA+TGG | + | chr1.1:1585958-1585977 | MS.gene27264:intron | 40.0% | |
| AGTCTAACTTAGTGCAGGTT+TGG | - | chr1.1:1581255-1581274 | None:intergenic | 40.0% | |
| ATAGATATCGTATCCGGAAG+TGG | + | chr1.1:1581622-1581641 | MS.gene27264:intron | 40.0% | |
| ATCCGGAAGTGGAATATTTC+AGG | + | chr1.1:1581633-1581652 | MS.gene27264:intron | 40.0% | |
| ATGAAATGCGCATGCGTTAA+CGG | + | chr1.1:1580371-1580390 | MS.gene27264:CDS | 40.0% | |
| ATTAGAGAGAGAGAGAGAGT+TGG | + | chr1.1:1585854-1585873 | MS.gene27264:intron | 40.0% | |
| ATTTAACTGTGCCCCAATGA+TGG | + | chr1.1:1582229-1582248 | MS.gene27264:intron | 40.0% | |
| CACAGCATTTATCTGTTGCT+CGG | - | chr1.1:1584905-1584924 | None:intergenic | 40.0% | |
| CACGAATTGCTTAAGCCTTT+AGG | + | chr1.1:1585314-1585333 | MS.gene27264:intron | 40.0% | |
| CAGTAATGTCTCCATCATTG+GGG | - | chr1.1:1582243-1582262 | None:intergenic | 40.0% | |
| CATGTTCATGCTCGTATACT+TGG | + | chr1.1:1582131-1582150 | MS.gene27264:intron | 40.0% | |
| CCAAAAGCAGTTCATAATCC+AGG | - | chr1.1:1585709-1585728 | None:intergenic | 40.0% | |
| CTAGGTTGCATTAGCACAAA+TGG | + | chr1.1:1583482-1583501 | MS.gene27264:intron | 40.0% | |
| CTCCTTACTACAGAATCTAC+GGG | - | chr1.1:1585947-1585966 | None:intergenic | 40.0% | |
| CTGATAACCTTCCTTATAGC+GGG | + | chr1.1:1581045-1581064 | MS.gene27264:intron | 40.0% | |
| CTGTTACAGCTTGAACATTC+TGG | + | chr1.1:1586259-1586278 | MS.gene27264:intron | 40.0% | |
| CTTGATATATGTCCCTTGCT+CGG | - | chr1.1:1586753-1586772 | None:intergenic | 40.0% | |
| GACTGTTGCAAAACTAACCA+AGG | - | chr1.1:1583933-1583952 | None:intergenic | 40.0% | |
| GCACAATATTGTTTACAGGC+AGG | + | chr1.1:1582361-1582380 | MS.gene27264:intron | 40.0% | |
| GCTGATAACCTTCCTTATAG+CGG | + | chr1.1:1581044-1581063 | MS.gene27264:intron | 40.0% | |
| GCTTATGGCTTATAGCTCAT+AGG | - | chr1.1:1581216-1581235 | None:intergenic | 40.0% | |
| GGTATACTTCTGGTAAGTAG+AGG | - | chr1.1:1581555-1581574 | None:intergenic | 40.0% | |
| GTATGCATATCTGCCTTAAG+TGG | + | chr1.1:1586363-1586382 | MS.gene27264:CDS | 40.0% | |
| TAAAGTAGAGCAGAACAGTC+TGG | - | chr1.1:1582899-1582918 | None:intergenic | 40.0% | |
| TAATTGGAACCATAAGAGCC+AGG | + | chr1.1:1582727-1582746 | MS.gene27264:intron | 40.0% | |
| TATTACCAGAAACAGAGCTC+TGG | + | chr1.1:1583407-1583426 | MS.gene27264:intron | 40.0% | |
| TCATCAGCATGATGAAACAG+AGG | - | chr1.1:1582294-1582313 | None:intergenic | 40.0% | |
| TCCCGATAGGAGAAGAAAAA+GGG | - | chr1.1:1582452-1582471 | None:intergenic | 40.0% | |
| TGAAGTTCTTCAGTGTTGTG+CGG | - | chr1.1:1580545-1580564 | None:intergenic | 40.0% | |
| TGAATCAGTTCTTCCTTCAC+CGG | + | chr1.1:1586212-1586231 | MS.gene27264:intron | 40.0% | |
| TGATAACCTTCCTTATAGCG+GGG | + | chr1.1:1581046-1581065 | MS.gene27264:intron | 40.0% | |
| TGCAAAAGAGGACTTTCCTA+TGG | + | chr1.1:1583248-1583267 | MS.gene27264:intron | 40.0% | |
| TGGTGCATGTGATTGATATC+AGG | + | chr1.1:1584747-1584766 | MS.gene27264:CDS | 40.0% | |
| TGGTGGAAAATAAGCTTAGG+TGG | + | chr1.1:1585900-1585919 | MS.gene27264:intron | 40.0% | |
| TGTCCAGATGAAGAATGGAA+AGG | + | chr1.1:1584496-1584515 | MS.gene27264:intron | 40.0% | |
| TTAACAGGACTCCATGGTAT+GGG | + | chr1.1:1586526-1586545 | MS.gene27264:intron | 40.0% | |
| TTAGAGAGAGAGAGAGAGTT+GGG | + | chr1.1:1585855-1585874 | MS.gene27264:intron | 40.0% | |
| TTTAACAGGACTCCATGGTA+TGG | + | chr1.1:1586525-1586544 | MS.gene27264:intron | 40.0% | |
| TTTCTCCTAACAGACACTGT+TGG | + | chr1.1:1584521-1584540 | MS.gene27264:CDS | 40.0% | |
| ! | AGAAGGTCCCCATTTTCAAA+TGG | - | chr1.1:1586566-1586585 | None:intergenic | 40.0% |
| ! | AGCTTCTAGCCTGATTTTCT+GGG | - | chr1.1:1586325-1586344 | None:intergenic | 40.0% |
| ! | CCTGGATTATGAACTGCTTT+TGG | + | chr1.1:1585706-1585725 | MS.gene27264:intron | 40.0% |
| ! | CTAGGATAGTTGATTCAGGA+CGG | + | chr1.1:1585542-1585561 | MS.gene27264:intron | 40.0% |
| ! | GATGGTTTGGAACAAGGTAT+TGG | + | chr1.1:1584969-1584988 | MS.gene27264:intron | 40.0% |
| ! | GCTTTTGTCCAGATGAAGAA+TGG | + | chr1.1:1584491-1584510 | MS.gene27264:intron | 40.0% |
| ! | GTCCACATTTTTGTTAGACG+AGG | - | chr1.1:1583519-1583538 | None:intergenic | 40.0% |
| ! | GTCCTTGTTTCGAACCAAAA+GGG | + | chr1.1:1585466-1585485 | MS.gene27264:intron | 40.0% |
| ! | TCCCTTTTTCTTCTCCTATC+GGG | + | chr1.1:1582448-1582467 | MS.gene27264:intron | 40.0% |
| ! | TCTTTTCACACAAGCCCTTT+TGG | - | chr1.1:1585483-1585502 | None:intergenic | 40.0% |
| ! | TGTCCTTGTTTCGAACCAAA+AGG | + | chr1.1:1585465-1585484 | MS.gene27264:intron | 40.0% |
| !! | AACCATTCCAACTTGGTGTA+TGG | - | chr1.1:1586594-1586613 | None:intergenic | 40.0% |
| !! | AACCTGGAAAAGGTTTTTGG+TGG | + | chr1.1:1583052-1583071 | MS.gene27264:CDS | 40.0% |
| !! | AAGCTTTTTCCCACTAAGTG+GGG | - | chr1.1:1586111-1586130 | None:intergenic | 40.0% |
| !! | CAAGCTTTTTCCCACTAAGT+GGG | - | chr1.1:1586112-1586131 | None:intergenic | 40.0% |
| !! | GGAACAAGGTATTGGGAAAA+TGG | + | chr1.1:1584977-1584996 | MS.gene27264:intron | 40.0% |
| !! | GTAGTGGCTTTATCTTCATC+GGG | - | chr1.1:1580647-1580666 | None:intergenic | 40.0% |
| !! | TAGGTTGGTTATACGAATGC+TGG | + | chr1.1:1584036-1584055 | MS.gene27264:intron | 40.0% |
| !! | TTGATGATGAGCTATCAGCT+GGG | + | chr1.1:1582621-1582640 | MS.gene27264:CDS | 40.0% |
| !! | TTTACGTCAAGGACTAGCTA+AGG | + | chr1.1:1585215-1585234 | MS.gene27264:intron | 40.0% |
| !! | TTTGATGATGAGCTATCAGC+TGG | + | chr1.1:1582620-1582639 | MS.gene27264:CDS | 40.0% |
| AAGCAACCTCGCAAAACGTA+GGG | - | chr1.1:1586786-1586805 | None:intergenic | 45.0% | |
| AAGGAGAGTAGATCAGATGG+AGG | + | chr1.1:1585961-1585980 | MS.gene27264:intron | 45.0% | |
| ACAAATCCTCAAGAGCAACC+TGG | - | chr1.1:1582748-1582767 | None:intergenic | 45.0% | |
| ACCGAAAGCAGTACCGTAAT+CGG | + | chr1.1:1583879-1583898 | MS.gene27264:CDS | 45.0% | |
| ACCTGTACTCTCCTTGTAGT+TGG | - | chr1.1:1584135-1584154 | None:intergenic | 45.0% | |
| ACTCTTGAGTCTTGACCACT+TGG | - | chr1.1:1585377-1585396 | None:intergenic | 45.0% | |
| ATATCTGCCTTAAGTGGCGA+TGG | + | chr1.1:1586369-1586388 | MS.gene27264:CDS | 45.0% | |
| ATTTATCTGTTGCTCGGCCA+GGG | - | chr1.1:1584899-1584918 | None:intergenic | 45.0% | |
| ATTTGCCAGAGCTCTGTTTC+TGG | - | chr1.1:1583415-1583434 | None:intergenic | 45.0% | |
| CAGAAAATCAGGCTAGAAGC+TGG | + | chr1.1:1586324-1586343 | MS.gene27264:CDS | 45.0% | |
| CCACTTAGTGGGAAAAAGCT+TGG | + | chr1.1:1586110-1586129 | MS.gene27264:intron | 45.0% | |
| CCTGCAGAGAGCAGAAAAAA+TGG | - | chr1.1:1584679-1584698 | None:intergenic | 45.0% | |
| CGAGCAACAGATAAATGCTG+TGG | + | chr1.1:1584903-1584922 | MS.gene27264:CDS | 45.0% | |
| CGAGCAAGGGACATATATCA+AGG | + | chr1.1:1586751-1586770 | MS.gene27264:CDS | 45.0% | |
| CTAGTGATCCCCAGAAAATC+AGG | + | chr1.1:1586313-1586332 | MS.gene27264:CDS | 45.0% | |
| CTTCAAGTGCACAGTAAAGC+CGG | - | chr1.1:1586234-1586253 | None:intergenic | 45.0% | |
| GACCCGTAGATTCTGTAGTA+AGG | + | chr1.1:1585942-1585961 | MS.gene27264:intron | 45.0% | |
| GAGGAAATGACTGTGCTGTA+AGG | - | chr1.1:1584331-1584350 | None:intergenic | 45.0% | |
| GCTACCTGTTGATCATAGTC+TGG | + | chr1.1:1586645-1586664 | MS.gene27264:intron | 45.0% | |
| GCTTTATCTTCATCGGGAGT+TGG | - | chr1.1:1580641-1580660 | None:intergenic | 45.0% | |
| GGTACACACAGTTGTCTCAT+AGG | - | chr1.1:1586812-1586831 | None:intergenic | 45.0% | |
| GTCCCGATAGGAGAAGAAAA+AGG | - | chr1.1:1582453-1582472 | None:intergenic | 45.0% | |
| TAAGCAACCTCGCAAAACGT+AGG | - | chr1.1:1586787-1586806 | None:intergenic | 45.0% | |
| TAGAGAGAGAGAGAGAGTTG+GGG | + | chr1.1:1585856-1585875 | MS.gene27264:intron | 45.0% | |
| TAGTTTCCCCGCTATAAGGA+AGG | - | chr1.1:1581055-1581074 | None:intergenic | 45.0% | |
| TCTGCCAGACTATGATCAAC+AGG | - | chr1.1:1586652-1586671 | None:intergenic | 45.0% | |
| TGATGAAACAGAGGAGTCTG+AGG | - | chr1.1:1582285-1582304 | None:intergenic | 45.0% | |
| TGGCAATATGTTGTCCCGAT+AGG | - | chr1.1:1582465-1582484 | None:intergenic | 45.0% | |
| TTACAGTGTCCCTTGGTTGT+GGG | + | chr1.1:1584354-1584373 | MS.gene27264:intron | 45.0% | |
| TTATCTTCATCGGGAGTTGG+AGG | - | chr1.1:1580638-1580657 | None:intergenic | 45.0% | |
| TTCTGATATCTCCTCCAGTG+TGG | - | chr1.1:1584717-1584736 | None:intergenic | 45.0% | |
| TTGTATGCCATCGCCACTTA+AGG | - | chr1.1:1586379-1586398 | None:intergenic | 45.0% | |
| TTTACAGTGTCCCTTGGTTG+TGG | + | chr1.1:1584353-1584372 | MS.gene27264:intron | 45.0% | |
| TTTGGGTGTAGTCACTGTAG+CGG | - | chr1.1:1582934-1582953 | None:intergenic | 45.0% | |
| ! | ATGCATGGGCTTTGACAGAT+CGG | + | chr1.1:1583821-1583840 | MS.gene27264:intron | 45.0% |
| ! | CAAGAAACCGAGTCTTGTGT+GGG | + | chr1.1:1584427-1584446 | MS.gene27264:intron | 45.0% |
| ! | CACCATACACCAAGTTGGAA+TGG | + | chr1.1:1586589-1586608 | MS.gene27264:CDS | 45.0% |
| ! | CAGCTTCTAGCCTGATTTTC+TGG | - | chr1.1:1586326-1586345 | None:intergenic | 45.0% |
| ! | CGCAACCTGGAAAAGGTTTT+TGG | + | chr1.1:1583049-1583068 | MS.gene27264:CDS | 45.0% |
| ! | CTCCACCAAAAACCTTTTCC+AGG | - | chr1.1:1583057-1583076 | None:intergenic | 45.0% |
| ! | GAAACAGAGCTCTGGCAAAT+AGG | + | chr1.1:1583415-1583434 | MS.gene27264:intron | 45.0% |
| ! | GAAGAGAAAGCGTATCTGGT+TGG | + | chr1.1:1581431-1581450 | MS.gene27264:CDS | 45.0% |
| ! | GCTTCTAGCCTGATTTTCTG+GGG | - | chr1.1:1586324-1586343 | None:intergenic | 45.0% |
| ! | TCCAACTACAAGGAGAGTAC+AGG | + | chr1.1:1584131-1584150 | MS.gene27264:CDS | 45.0% |
| ! | TTTTCAGTAAGAAGGCGGTG+AGG | + | chr1.1:1582818-1582837 | MS.gene27264:intron | 45.0% |
| ! | TTTTTCCCACTAAGTGGGGT+CGG | - | chr1.1:1586107-1586126 | None:intergenic | 45.0% |
| !! | CCAAGCTTTTTCCCACTAAG+TGG | - | chr1.1:1586113-1586132 | None:intergenic | 45.0% |
| !! | CTGGTTGGTGTTGAGAGAAA+AGG | + | chr1.1:1581446-1581465 | MS.gene27264:CDS | 45.0% |
| !!! | AGCCCTTTTGGTTCGAAACA+AGG | - | chr1.1:1585471-1585490 | None:intergenic | 45.0% |
| !!! | CCATTTTTTCTGCTCTCTGC+AGG | + | chr1.1:1584676-1584695 | MS.gene27264:intron | 45.0% |
| !!! | AATAATAAATTATTCATTTT+GGG | - | chr1.1:1582951-1582970 | None:intergenic | 5.0% |
| !!! | AATGATTTTTTTTTTTTTTT+TGG | + | chr1.1:1584396-1584415 | MS.gene27264:intron | 5.0% |
| !!! | TAATAATAAATTATTCATTT+TGG | - | chr1.1:1582952-1582971 | None:intergenic | 5.0% |
| AAATGCGCATGCGTTAACGG+TGG | + | chr1.1:1580374-1580393 | MS.gene27264:CDS | 50.0% | |
| AACCGCTTCAAGCTCCGTAA+CGG | + | chr1.1:1580725-1580744 | MS.gene27264:CDS | 50.0% | |
| ACTCACCTTGAGCGTCAATC+AGG | + | chr1.1:1583537-1583556 | MS.gene27264:CDS | 50.0% | |
| AGCAACCTCGCAAAACGTAG+GGG | - | chr1.1:1586785-1586804 | None:intergenic | 50.0% | |
| CAAAGCTTCCACCCATACCA+TGG | - | chr1.1:1586540-1586559 | None:intergenic | 50.0% | |
| CAATCAGGAGGACAGGTGAA+GGG | + | chr1.1:1583552-1583571 | MS.gene27264:CDS | 50.0% | |
| CAGAGCCAATGTACGTCCTA+GGG | - | chr1.1:1582544-1582563 | None:intergenic | 50.0% | |
| CAGAGTCTCTCATGACCAAG+TGG | + | chr1.1:1585359-1585378 | MS.gene27264:intron | 50.0% | |
| CATTTATCTGTTGCTCGGCC+AGG | - | chr1.1:1584900-1584919 | None:intergenic | 50.0% | |
| CCAAACCCTAGGACGTACAT+TGG | + | chr1.1:1582536-1582555 | MS.gene27264:CDS | 50.0% | |
| CCAAGGGACACTGTAAACAG+AGG | - | chr1.1:1584350-1584369 | None:intergenic | 50.0% | |
| CCAATGTACGTCCTAGGGTT+TGG | - | chr1.1:1582539-1582558 | None:intergenic | 50.0% | |
| CCTCTGTTTACAGTGTCCCT+TGG | + | chr1.1:1584347-1584366 | MS.gene27264:intron | 50.0% | |
| CGATGTCGCGTTGGATGTTA+CGG | + | chr1.1:1585810-1585829 | MS.gene27264:intron | 50.0% | |
| CTCAGCACCATACACCAAGT+TGG | + | chr1.1:1586584-1586603 | MS.gene27264:CDS | 50.0% | |
| GAGCAGTTAGCTGATACTGC+TGG | + | chr1.1:1581515-1581534 | MS.gene27264:CDS | 50.0% | |
| GATGAGCTATCAGCTGGGTA+AGG | + | chr1.1:1582626-1582645 | MS.gene27264:intron | 50.0% | |
| GATGTCGCGTTGGATGTTAC+GGG | + | chr1.1:1585811-1585830 | MS.gene27264:intron | 50.0% | |
| GATTCAGGACGGCAACAAGA+GGG | + | chr1.1:1585553-1585572 | MS.gene27264:intron | 50.0% | |
| GCCGATTACGGTACTGCTTT+CGG | - | chr1.1:1583883-1583902 | None:intergenic | 50.0% | |
| TAAGAGCCAGGTTGCTCTTG+AGG | + | chr1.1:1582739-1582758 | MS.gene27264:intron | 50.0% | |
| TACTGATCCCTGCTGATCCT+AGG | + | chr1.1:1583020-1583039 | MS.gene27264:intron | 50.0% | |
| TCAATCAGGAGGACAGGTGA+AGG | + | chr1.1:1583551-1583570 | MS.gene27264:CDS | 50.0% | |
| TGATTCAGGACGGCAACAAG+AGG | + | chr1.1:1585552-1585571 | MS.gene27264:intron | 50.0% | |
| TGGAAGTAAAACGGCGTCGT+TGG | - | chr1.1:1580597-1580616 | None:intergenic | 50.0% | |
| TTCCGTTACGGAGCTTGAAG+CGG | - | chr1.1:1580730-1580749 | None:intergenic | 50.0% | |
| TTTATCTGTTGCTCGGCCAG+GGG | - | chr1.1:1584898-1584917 | None:intergenic | 50.0% | |
| TTTCTGCTCTCTGCAGGTTG+CGG | + | chr1.1:1584682-1584701 | MS.gene27264:intron | 50.0% | |
| ! | CAAGAGCAACCTGGCTCTTA+TGG | - | chr1.1:1582739-1582758 | None:intergenic | 50.0% |
| ! | CAGCTAGTTTCCCCGCTATA+AGG | - | chr1.1:1581059-1581078 | None:intergenic | 50.0% |
| ! | CTTGGTGTATGGTGCTGAGA+AGG | - | chr1.1:1586583-1586602 | None:intergenic | 50.0% |
| ! | GCAAGAAACCGAGTCTTGTG+TGG | + | chr1.1:1584426-1584445 | MS.gene27264:intron | 50.0% |
| ! | GTACTGAGAGACGCCGATTA+CGG | - | chr1.1:1583895-1583914 | None:intergenic | 50.0% |
| ACAGGACTCCATGGTATGGG+TGG | + | chr1.1:1586529-1586548 | MS.gene27264:intron | 55.0% | |
| ACCAAGGATACCACAGGCAC+AGG | - | chr1.1:1583917-1583936 | None:intergenic | 55.0% | |
| ACCTGTGCCTGTGGTATCCT+TGG | + | chr1.1:1583913-1583932 | MS.gene27264:CDS | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | - | chr1.1:1586099-1586118 | None:intergenic | 55.0% | |
| AGGAGGACAGGTGAAGGGAA+TGG | + | chr1.1:1583557-1583576 | MS.gene27264:CDS | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | + | chr1.1:1586098-1586117 | MS.gene27264:intron | 55.0% | |
| CACCTTGAGCGTCAATCAGG+AGG | + | chr1.1:1583540-1583559 | MS.gene27264:CDS | 55.0% | |
| CATGAATTGCAGTCACCCCC+TGG | + | chr1.1:1584879-1584898 | MS.gene27264:intron | 55.0% | |
| CCAGAGCCAATGTACGTCCT+AGG | - | chr1.1:1582545-1582564 | None:intergenic | 55.0% | |
| CGCGTTGGATGTTACGGGAT+AGG | + | chr1.1:1585816-1585835 | MS.gene27264:intron | 55.0% | |
| GCAACTGCGCAACCTGGAAA+AGG | + | chr1.1:1583042-1583061 | MS.gene27264:CDS | 55.0% | |
| GCAGTTGCCTAGGATCAGCA+GGG | - | chr1.1:1583030-1583049 | None:intergenic | 55.0% | |
| GGAGGACAGGTGAAGGGAAT+GGG | + | chr1.1:1583558-1583577 | MS.gene27264:CDS | 55.0% | |
| GTCCTCCTGATTGACGCTCA+AGG | - | chr1.1:1583545-1583564 | None:intergenic | 55.0% | |
| GTGCACAGTAAAGCCGGTGA+AGG | - | chr1.1:1586228-1586247 | None:intergenic | 55.0% | |
| TCTCTCAGTACCTGTGCCTG+TGG | + | chr1.1:1583904-1583923 | MS.gene27264:CDS | 55.0% | |
| TGAGCGTCAATCAGGAGGAC+AGG | + | chr1.1:1583545-1583564 | MS.gene27264:CDS | 55.0% | |
| TGGAGCAGATGTTCTTGCCG+AGG | + | chr1.1:1584086-1584105 | MS.gene27264:CDS | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | chr1.1:1586099-1586118 | MS.gene27264:intron | 55.0% | |
| TTATCTGTTGCTCGGCCAGG+GGG | - | chr1.1:1584897-1584916 | None:intergenic | 55.0% | |
| ! | ATGTGCCCCTACGTTTTGCG+AGG | + | chr1.1:1586777-1586796 | MS.gene27264:CDS | 55.0% |
| ! | CAAGCTCCGTAACGGAAGAG+AGG | + | chr1.1:1580733-1580752 | MS.gene27264:CDS | 55.0% |
| ! | GGCTTGCTTCTCCAAACCCT+AGG | + | chr1.1:1582525-1582544 | MS.gene27264:intron | 55.0% |
| !! | CCTAGGACGTACATTGGCTC+TGG | + | chr1.1:1582542-1582561 | MS.gene27264:CDS | 55.0% |
| CGCAGTTGCCTAGGATCAGC+AGG | - | chr1.1:1583031-1583050 | None:intergenic | 60.0% | |
| CGGAGATGACGATGTCGCGT+TGG | + | chr1.1:1585801-1585820 | MS.gene27264:intron | 60.0% | |
| TCCAGGTTGCGCAGTTGCCT+AGG | - | chr1.1:1583040-1583059 | None:intergenic | 60.0% | |
| TCCTAGGCAACTGCGCAACC+TGG | + | chr1.1:1583036-1583055 | MS.gene27264:intron | 60.0% | |
| TGCGCATGCGTTAACGGTGG+TGG | + | chr1.1:1580377-1580396 | MS.gene27264:CDS | 60.0% | |
| !! | CTCCTCCAGTGTGGCTCTGA+AGG | - | chr1.1:1584708-1584727 | None:intergenic | 60.0% |
| GGCCTTCAGAGCCACACTGG+AGG | + | chr1.1:1584703-1584722 | MS.gene27264:CDS | 65.0% | |
| TGCGGCCTTCAGAGCCACAC+TGG | + | chr1.1:1584700-1584719 | MS.gene27264:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 1580368 | 1586841 | 1580368 | ID=MS.gene27264 |
| chr1.1 | mRNA | 1580368 | 1586841 | 1580368 | ID=MS.gene27264.t1;Parent=MS.gene27264 |
| chr1.1 | exon | 1580368 | 1580754 | 1580368 | ID=MS.gene27264.t1.exon1;Parent=MS.gene27264.t1 |
| chr1.1 | CDS | 1580368 | 1580754 | 1580368 | ID=cds.MS.gene27264.t1;Parent=MS.gene27264.t1 |
| chr1.1 | exon | 1581425 | 1581567 | 1581425 | ID=MS.gene27264.t1.exon2;Parent=MS.gene27264.t1 |
| chr1.1 | CDS | 1581425 | 1581567 | 1581425 | ID=cds.MS.gene27264.t1;Parent=MS.gene27264.t1 |
| chr1.1 | exon | 1582526 | 1582642 | 1582526 | ID=MS.gene27264.t1.exon3;Parent=MS.gene27264.t1 |
| chr1.1 | CDS | 1582526 | 1582642 | 1582526 | ID=cds.MS.gene27264.t1;Parent=MS.gene27264.t1 |
| chr1.1 | exon | 1583042 | 1583156 | 1583042 | ID=MS.gene27264.t1.exon4;Parent=MS.gene27264.t1 |
| chr1.1 | CDS | 1583042 | 1583156 | 1583042 | ID=cds.MS.gene27264.t1;Parent=MS.gene27264.t1 |
| chr1.1 | exon | 1583486 | 1583623 | 1583486 | ID=MS.gene27264.t1.exon5;Parent=MS.gene27264.t1 |
| chr1.1 | CDS | 1583486 | 1583623 | 1583486 | ID=cds.MS.gene27264.t1;Parent=MS.gene27264.t1 |
| chr1.1 | exon | 1583839 | 1583934 | 1583839 | ID=MS.gene27264.t1.exon6;Parent=MS.gene27264.t1 |
| chr1.1 | CDS | 1583839 | 1583934 | 1583839 | ID=cds.MS.gene27264.t1;Parent=MS.gene27264.t1 |
| chr1.1 | exon | 1584039 | 1584152 | 1584039 | ID=MS.gene27264.t1.exon7;Parent=MS.gene27264.t1 |
| chr1.1 | CDS | 1584039 | 1584152 | 1584039 | ID=cds.MS.gene27264.t1;Parent=MS.gene27264.t1 |
| chr1.1 | exon | 1584503 | 1584571 | 1584503 | ID=MS.gene27264.t1.exon8;Parent=MS.gene27264.t1 |
| chr1.1 | CDS | 1584503 | 1584571 | 1584503 | ID=cds.MS.gene27264.t1;Parent=MS.gene27264.t1 |
| chr1.1 | exon | 1584698 | 1584768 | 1584698 | ID=MS.gene27264.t1.exon9;Parent=MS.gene27264.t1 |
| chr1.1 | CDS | 1584698 | 1584768 | 1584698 | ID=cds.MS.gene27264.t1;Parent=MS.gene27264.t1 |
| chr1.1 | exon | 1584891 | 1584984 | 1584891 | ID=MS.gene27264.t1.exon10;Parent=MS.gene27264.t1 |
| chr1.1 | CDS | 1584891 | 1584984 | 1584891 | ID=cds.MS.gene27264.t1;Parent=MS.gene27264.t1 |
| chr1.1 | exon | 1586303 | 1586431 | 1586303 | ID=MS.gene27264.t1.exon11;Parent=MS.gene27264.t1 |
| chr1.1 | CDS | 1586303 | 1586431 | 1586303 | ID=cds.MS.gene27264.t1;Parent=MS.gene27264.t1 |
| chr1.1 | exon | 1586533 | 1586622 | 1586533 | ID=MS.gene27264.t1.exon12;Parent=MS.gene27264.t1 |
| chr1.1 | CDS | 1586533 | 1586622 | 1586533 | ID=cds.MS.gene27264.t1;Parent=MS.gene27264.t1 |
| chr1.1 | exon | 1586743 | 1586841 | 1586743 | ID=MS.gene27264.t1.exon13;Parent=MS.gene27264.t1 |
| chr1.1 | CDS | 1586743 | 1586841 | 1586743 | ID=cds.MS.gene27264.t1;Parent=MS.gene27264.t1 |
| Gene Sequence |
| Protein sequence |
