AlfalfaGEDB | MS.gene28863

M. sativa cultivar XinJiangDaYe / MS.gene28863

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene28863.t1	XP_003607123.1	92.4	92	7	0	1	92	1	92	3.00E-40	174.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene28863.t1	P33080	67.4	92	30	0	1	92	1	92	7.5e-32	137.5

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene28863.t1	G7JL45	92.4	92	7	0	1	92	1	92	2.2e-40	174.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene68165	MS.gene28863	PPI
MS.gene01764	MS.gene28863	PPI
MS.gene045361	MS.gene28863	PPI
MS.gene50675	MS.gene28863	PPI
MS.gene003591	MS.gene28863	PPI
MS.gene50764	MS.gene28863	PPI
MS.gene75315	MS.gene28863	PPI
MS.gene062979	MS.gene28863	PPI
MS.gene40325	MS.gene28863	PPI
MS.gene79885	MS.gene28863	PPI
MS.gene75679	MS.gene28863	PPI
MS.gene01358	MS.gene28863	PPI
MS.gene014668	MS.gene28863	PPI
MS.gene75675	MS.gene28863	PPI
MS.gene003583	MS.gene28863	PPI
MS.gene79888	MS.gene28863	PPI
MS.gene40326	MS.gene28863	PPI
MS.gene062952	MS.gene28863	PPI
MS.gene77527	MS.gene28863	PPI
MS.gene031199	MS.gene28863	PPI
MS.gene50676	MS.gene28863	PPI
MS.gene003614	MS.gene28863	PPI
MS.gene057797	MS.gene28863	PPI
MS.gene23370	MS.gene28863	PPI
MS.gene77529	MS.gene28863	PPI
MS.gene014667	MS.gene28863	PPI
MS.gene68760	MS.gene28863	PPI
MS.gene003594	MS.gene28863	PPI
MS.gene003596	MS.gene28863	PPI
MS.gene50665	MS.gene28863	PPI
MS.gene79889	MS.gene28863	PPI
MS.gene50677	MS.gene28863	PPI
MS.gene68759	MS.gene28863	PPI
MS.gene003586	MS.gene28863	PPI
MS.gene057778	MS.gene28863	PPI
MS.gene062988	MS.gene28863	PPI
MS.gene75673	MS.gene28863	PPI
MS.gene045366	MS.gene28863	PPI
MS.gene062963	MS.gene28863	PPI
MS.gene77528	MS.gene28863	PPI
MS.gene68164	MS.gene28863	PPI
MS.gene50763	MS.gene28863	PPI
MS.gene031198	MS.gene28863	PPI
MS.gene014670	MS.gene28863	PPI
MS.gene031200	MS.gene28863	PPI
MS.gene045365	MS.gene28863	PPI
MS.gene045364	MS.gene28863	PPI
MS.gene23372	MS.gene28863	PPI
MS.gene50659	MS.gene28863	PPI
MS.gene75316	MS.gene28863	PPI
MS.gene68163	MS.gene28863	PPI
MS.gene057790	MS.gene28863	PPI
MS.gene062974	MS.gene28863	PPI
MS.gene045363	MS.gene28863	PPI
MS.gene003624	MS.gene28863	PPI
MS.gene79886	MS.gene28863	PPI
MS.gene23371	MS.gene28863	PPI
MS.gene031201	MS.gene28863	PPI
MS.gene75314	MS.gene28863	PPI
MS.gene057808	MS.gene28863	PPI
MS.gene68761	MS.gene28863	PPI
MS.gene75676	MS.gene28863	PPI
MS.gene062951	MS.gene28863	PPI
MS.gene045362	MS.gene28863	PPI
MS.gene77523	MS.gene28863	PPI
MS.gene75674	MS.gene28863	PPI
MS.gene79890	MS.gene28863	PPI
MS.gene50765	MS.gene28863	PPI
MS.gene003615	MS.gene28863	PPI
MS.gene79887	MS.gene28863	PPI
MS.gene062973	MS.gene28863	PPI
MS.gene003602	MS.gene28863	PPI
MS.gene047517	MS.gene28863	PPI
MS.gene003627	MS.gene28863	PPI
MS.gene045367	MS.gene28863	PPI
MS.gene003577	MS.gene28863	PPI
MS.gene77524	MS.gene28863	PPI
MS.gene062984	MS.gene28863	PPI
MS.gene057801	MS.gene28863	PPI
MS.gene014223	MS.gene28863	PPI
MS.gene014222	MS.gene28863	PPI
MS.gene40327	MS.gene28863	PPI
MS.gene75678	MS.gene28863	PPI
MS.gene002380	MS.gene28863	PPI
MS.gene003587	MS.gene28863	PPI
MS.gene50684	MS.gene28863	PPI
MS.gene003590	MS.gene28863	PPI
MS.gene045368	MS.gene28863	PPI
MS.gene062943	MS.gene28863	PPI
MS.gene063112	MS.gene28863	PPI
MS.gene79891	MS.gene28863	PPI
MS.gene003608	MS.gene28863	PPI
MS.gene75672	MS.gene28863	PPI
MS.gene77526	MS.gene28863	PPI
MS.gene045360	MS.gene28863	PPI
MS.gene50654	MS.gene28863	PPI
MS.gene014669	MS.gene28863	PPI
MS.gene057818	MS.gene28863	PPI
MS.gene50652	MS.gene28863	PPI
MS.gene50766	MS.gene28863	PPI
MS.gene68162	MS.gene28863	PPI
MS.gene50687	MS.gene28863	PPI
MS.gene75677	MS.gene28863	PPI
MS.gene014671	MS.gene28863	PPI
MS.gene003625	MS.gene28863	PPI
MS.gene057795	MS.gene28863	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene28863.t1	MTR_4g072500	92.391	92	7	0	1	92	1	92	9.78e-60	177
MS.gene28863.t1	MTR_4g072530	92.222	90	7	0	1	90	1	90	1.48e-58	174
MS.gene28863.t1	MTR_4g072640	86.813	91	12	0	1	91	1	91	1.71e-55	166
MS.gene28863.t1	MTR_4g072310	73.118	93	24	1	1	92	1	93	2.39e-48	149
MS.gene28863.t1	MTR_4g072570	76.087	92	22	0	1	92	1	92	1.28e-47	147
MS.gene28863.t1	MTR_4g072860	74.194	93	23	1	1	92	1	93	5.51e-47	145
MS.gene28863.t1	MTR_3g084150	72.826	92	25	0	1	92	1	92	5.97e-47	145
MS.gene28863.t1	MTR_4g072230	74.194	93	21	2	1	92	1	91	7.79e-47	145
MS.gene28863.t1	MTR_4g072480	75.000	92	23	0	1	92	1	92	1.34e-46	144
MS.gene28863.t1	MTR_4g072680	76.087	92	22	0	1	92	1	92	2.13e-46	144
MS.gene28863.t1	MTR_8g461410	70.652	92	27	0	1	92	1	92	2.57e-46	143
MS.gene28863.t1	MTR_4g072730	74.444	90	23	0	1	90	1	90	5.07e-46	142
MS.gene28863.t1	MTR_3g084180	71.739	92	26	0	1	92	1	92	8.98e-46	142
MS.gene28863.t1	MTR_4g072880	67.742	93	29	1	1	92	1	93	9.66e-46	142
MS.gene28863.t1	MTR_3g084240	74.194	93	22	2	1	92	1	92	1.01e-45	142
MS.gene28863.t1	MTR_4g072620	72.826	92	25	0	1	92	1	92	1.66e-45	141
MS.gene28863.t1	MTR_4g072270	69.892	93	27	1	1	92	1	93	1.75e-45	141
MS.gene28863.t1	MTR_4g072870	69.231	91	27	1	1	90	1	91	2.94e-45	140
MS.gene28863.t1	MTR_4g072250	70.968	93	25	2	1	92	1	92	3.42e-45	140
MS.gene28863.t1	MTR_3g084170	74.194	93	22	2	1	92	1	92	3.86e-45	140
MS.gene28863.t1	MTR_4g050700	70.968	93	26	1	1	92	1	93	6.04e-45	140
MS.gene28863.t1	MTR_2g012410	70.968	93	26	1	1	92	1	93	6.04e-45	140
MS.gene28863.t1	MTR_4g072460	73.913	92	24	0	1	92	1	92	1.12e-44	139
MS.gene28863.t1	MTR_3g110038	73.118	93	23	2	1	92	1	92	4.56e-44	137
MS.gene28863.t1	MTR_3g117630	72.414	87	24	0	6	92	6	92	7.07e-44	137
MS.gene28863.t1	MTR_4g072240	67.033	91	29	1	1	90	1	91	8.09e-44	137
MS.gene28863.t1	MTR_3g110042	71.910	89	25	0	1	89	1	89	8.63e-44	137
MS.gene28863.t1	MTR_3g084250	69.565	92	28	0	1	92	1	92	1.20e-43	137
MS.gene28863.t1	MTR_4g072300	67.033	91	29	1	1	90	1	91	2.20e-43	136
MS.gene28863.t1	MTR_4g072220	66.667	93	30	1	1	92	1	93	2.90e-43	135
MS.gene28863.t1	MTR_3g084220	73.118	93	23	2	1	92	1	92	4.82e-43	135
MS.gene28863.t1	MTR_4g072330	70.330	91	23	2	1	90	1	88	1.52e-41	131
MS.gene28863.t1	MTR_3g110032	67.742	93	29	1	1	92	1	93	3.25e-41	130
MS.gene28863.t1	MTR_4g072260	64.516	93	32	1	1	92	1	93	4.61e-41	130
MS.gene28863.t1	MTR_4g072850	70.213	94	26	1	1	92	1	94	1.14e-40	129
MS.gene28863.t1	MTR_4g072370	70.330	91	23	2	1	90	1	88	1.15e-40	129
MS.gene28863.t1	MTR_4g072890	65.934	91	30	1	1	90	1	91	1.95e-40	129
MS.gene28863.t1	MTR_3g084190	70.652	92	27	0	1	92	1	92	3.76e-40	128
MS.gene28863.t1	MTR_3g084260	67.033	91	29	1	1	90	1	91	6.70e-40	127
MS.gene28863.t1	MTR_5g008360	75.949	79	19	0	14	92	5	83	1.03e-39	126
MS.gene28863.t1	MTR_8g461420	69.565	92	28	0	1	92	1	92	1.62e-39	126
MS.gene28863.t1	MTR_4g072660	67.391	92	25	1	1	92	1	87	3.11e-39	125
MS.gene28863.t1	MTR_3g084160	68.478	92	29	0	1	92	1	92	4.63e-39	125
MS.gene28863.t1	MTR_3g084210	70.652	92	27	0	1	92	1	92	8.56e-39	124
MS.gene28863.t1	MTR_4g072940	75.000	72	18	0	21	92	53	124	1.49e-38	125
MS.gene28863.t1	MTR_4g072490	65.934	91	24	2	1	90	1	85	1.59e-38	124
MS.gene28863.t1	MTR_3g110045	72.222	90	25	0	3	92	62	151	2.49e-38	125
MS.gene28863.t1	MTR_3g084230	68.478	92	29	0	1	92	1	92	3.37e-38	123
MS.gene28863.t1	MTR_4g072820	65.556	90	26	1	1	90	1	85	4.79e-38	122
MS.gene28863.t1	MTR_4g072830	70.000	90	23	2	1	89	1	87	4.93e-38	122
MS.gene28863.t1	MTR_4g072630	64.444	90	28	1	1	90	1	86	1.60e-37	121
MS.gene28863.t1	MTR_4g072540	67.778	90	25	1	1	90	1	86	2.15e-37	120
MS.gene28863.t1	MTR_4g072740	65.934	91	24	2	1	90	1	85	4.51e-37	120
MS.gene28863.t1	MTR_4g072470	67.033	91	23	2	1	90	1	85	5.99e-37	119
MS.gene28863.t1	MTR_4g072580	64.835	91	25	2	1	90	1	85	8.35e-37	119
MS.gene28863.t1	MTR_5g008370	80.882	68	13	0	23	90	23	90	1.43e-36	120
MS.gene28863.t1	MTR_4g072600	64.835	91	25	2	1	90	1	85	6.08e-36	117
MS.gene28863.t1	MTR_4g072720	65.556	90	27	1	1	90	1	86	7.20e-36	117
MS.gene28863.t1	MTR_4g072465	61.111	90	31	1	1	90	1	86	1.62e-35	116
MS.gene28863.t1	MTR_4g072610	63.333	90	27	1	1	90	1	84	5.53e-35	114
MS.gene28863.t1	MTR_4g072550	73.611	72	19	0	21	92	32	103	1.60e-34	114
MS.gene28863.t1	MTR_4g072650	63.333	90	27	1	1	90	1	84	2.54e-34	113
MS.gene28863.t1	MTR_4g072670	65.556	90	27	1	1	90	1	86	3.13e-34	112
MS.gene28863.t1	MTR_4g072510	61.111	90	31	1	1	90	1	86	5.97e-34	112
MS.gene28863.t1	MTR_4g072590	63.333	90	28	1	1	90	1	85	1.41e-33	111
MS.gene28863.t1	MTR_4g072750	71.622	74	19	1	1	72	1	74	5.49e-33	109
MS.gene28863.t1	MTR_4g072290	60.215	93	22	2	1	92	1	79	9.15e-33	108
MS.gene28863.t1	MTR_4g072380	61.538	91	29	2	1	90	1	86	1.34e-32	108
MS.gene28863.t1	MTR_4g072690	62.222	90	29	1	1	90	1	85	2.05e-32	108
MS.gene28863.t1	MTR_4g072450	63.333	90	28	1	1	90	1	85	2.09e-32	108
MS.gene28863.t1	MTR_4g072910	63.514	74	27	0	17	90	27	100	3.38e-32	108
MS.gene28863.t1	MTR_4g072560	53.608	97	37	2	1	89	1	97	7.84e-32	107
MS.gene28863.t1	MTR_4g072980	58.696	92	35	2	1	89	1	92	3.07e-31	105
MS.gene28863.t1	MTR_4g072770	57.143	91	29	1	1	91	1	81	9.99e-31	103
MS.gene28863.t1	MTR_5g008350	61.250	80	24	2	1	79	1	74	5.05e-29	99.8
MS.gene28863.t1	MTR_3g084200	67.123	73	22	2	1	72	1	72	5.41e-29	100
MS.gene28863.t1	MTR_3g117640	70.149	67	19	1	25	90	34	100	2.03e-28	99.0
MS.gene28863.t1	MTR_4g072280	61.333	75	28	1	1	74	1	75	2.30e-28	97.8
MS.gene28863.t1	MTR_3g113310	63.636	66	23	1	24	89	41	105	1.14e-26	94.4
MS.gene28863.t1	MTR_6g077850	55.882	68	30	0	23	90	32	99	2.78e-26	93.2
MS.gene28863.t1	MTR_3g117610	67.188	64	20	1	24	87	44	106	3.58e-26	93.2
MS.gene28863.t1	MTR_3g110035	62.121	66	25	0	27	92	73	138	2.13e-25	92.0
MS.gene28863.t1	MTR_4g072190	62.121	66	24	1	24	89	35	99	2.84e-24	88.2
MS.gene28863.t1	MTR_8g461400	53.763	93	15	3	1	92	1	66	4.54e-24	86.7
MS.gene28863.t1	MTR_8g076040	59.375	64	25	1	24	87	40	102	1.31e-21	81.6
MS.gene28863.t1	MTR_5g021820	54.545	66	29	1	24	89	39	103	1.89e-21	81.3
MS.gene28863.t1	MTR_4g072930	56.522	69	26	1	26	90	42	110	1.98e-21	81.3
MS.gene28863.t1	MTR_4g005310	53.030	66	30	1	21	85	58	123	3.79e-19	76.6
MS.gene28863.t1	MTR_7g118010	53.846	65	27	2	25	87	23	86	8.19e-18	72.0
MS.gene28863.t1	MTR_2g043960	46.914	81	41	2	6	85	56	135	9.27e-18	73.2
MS.gene28863.t1	MTR_4g072840	44.444	90	20	2	1	90	1	60	1.59e-17	70.1
MS.gene28863.t1	MTR_4g124750	50.000	64	31	1	24	87	68	130	1.85e-17	72.4
MS.gene28863.t1	MTR_1g024085	53.731	67	30	1	16	82	28	93	2.23e-17	72.0
MS.gene28863.t1	MTR_0388s0020	42.045	88	46	3	5	89	56	141	6.09e-17	70.9
MS.gene28863.t1	MTR_8g026730	48.529	68	32	2	25	90	27	93	4.15e-16	67.8
MS.gene28863.t1	MTR_3g092220	49.231	65	30	2	21	83	29	92	8.09e-16	67.0
MS.gene28863.t1	MTR_1g094750	44.186	86	43	3	10	91	31	115	9.16e-16	67.0
MS.gene28863.t1	MTR_4g072160	50.725	69	33	1	17	85	29	96	2.22e-15	66.6
MS.gene28863.t1	MTR_4g025830	44.286	70	35	2	23	89	77	145	4.35e-15	66.6
MS.gene28863.t1	MTR_1g061570	47.619	63	32	1	23	85	17	78	5.04e-15	65.5
MS.gene28863.t1	MTR_1g063950	48.333	60	30	1	23	82	46	104	1.40e-14	64.3
MS.gene28863.t1	MTR_8g461210	41.463	82	47	1	4	85	14	94	2.06e-14	63.5
MS.gene28863.t1	MTR_1g009150	52.459	61	28	1	25	85	71	130	2.24e-14	65.1
MS.gene28863.t1	MTR_7g101740	48.438	64	32	1	24	87	39	101	2.39e-14	63.5
MS.gene28863.t1	MTR_4g005320	47.541	61	31	1	25	85	70	129	3.52e-13	61.6
MS.gene28863.t1	MTR_2g066830	37.000	100	47	3	2	92	41	133	7.37e-13	60.1
MS.gene28863.t1	MTR_1g059770	40.299	67	39	1	23	89	47	112	7.39e-13	60.1
MS.gene28863.t1	MTR_8g096470	46.667	60	31	1	26	85	47	105	1.23e-12	58.9
MS.gene28863.t1	MTR_3g109160	50.820	61	29	1	25	85	69	128	2.11e-12	59.7
MS.gene28863.t1	MTR_3g098970	32.955	88	57	2	5	92	34	119	3.50e-12	58.5
MS.gene28863.t1	MTR_7g405740	40.909	66	38	1	25	90	67	131	6.89e-12	58.2
MS.gene28863.t1	MTR_3g105900	65.789	38	13	0	22	59	1169	1206	7.03e-12	60.1
MS.gene28863.t1	MTR_8g101520	43.939	66	36	1	26	91	51	115	1.06e-11	57.8
MS.gene28863.t1	MTR_3g097120	42.466	73	33	2	21	85	5	76	1.18e-11	56.2
MS.gene28863.t1	MTR_8g101530	39.706	68	40	1	24	91	39	105	2.13e-11	56.6
MS.gene28863.t1	MTR_8g096500	46.552	58	30	1	25	82	49	105	2.43e-11	56.6
MS.gene28863.t1	MTR_7g104940	38.710	62	37	1	28	89	53	113	3.24e-11	55.8
MS.gene28863.t1	MTR_8g096440	47.368	57	29	1	26	82	46	101	3.53e-11	55.8
MS.gene28863.t1	MTR_7g104950	34.783	69	44	1	21	89	46	113	5.53e-11	55.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene28863.t1	AT4G38840	58.140	86	35	1	6	90	14	99	6.61e-33	110
MS.gene28863.t1	AT5G18060	63.158	76	27	1	16	90	15	90	1.35e-31	106
MS.gene28863.t1	AT5G18020	58.140	86	28	2	6	90	12	90	4.74e-31	105
MS.gene28863.t1	AT5G18080	66.667	69	22	1	23	90	22	90	8.15e-31	104
MS.gene28863.t1	AT4G38850	56.818	88	25	2	6	90	12	89	9.14e-31	104
MS.gene28863.t1	AT5G18050	60.526	76	29	1	16	90	15	90	9.20e-31	104
MS.gene28863.t1	AT4G34770	63.095	84	26	2	9	90	22	102	1.55e-30	104
MS.gene28863.t1	AT2G21200	65.714	70	23	1	21	89	17	86	3.16e-30	102
MS.gene28863.t1	AT5G18030	65.217	69	23	1	23	90	20	88	3.57e-30	102
MS.gene28863.t1	AT3G03850	70.149	67	18	1	26	90	26	92	1.24e-29	101
MS.gene28863.t1	AT4G38825	65.217	69	23	1	23	90	21	89	1.80e-29	101
MS.gene28863.t1	AT3G03840	62.500	72	25	1	21	90	23	94	2.62e-29	100
MS.gene28863.t1	AT5G18010	63.768	69	24	1	23	90	22	90	5.24e-29	100
MS.gene28863.t1	AT3G03820	61.644	73	25	1	21	90	23	95	1.20e-28	99.4
MS.gene28863.t1	AT2G21210	61.765	68	24	1	25	90	28	95	1.68e-28	99.0
MS.gene28863.t1	AT2G21210	61.765	68	24	1	25	90	95	162	9.07e-28	99.0
MS.gene28863.t1	AT4G34800	55.294	85	31	2	1	82	1	81	3.15e-27	95.5
MS.gene28863.t1	AT3G03830	52.273	88	35	2	10	90	5	92	9.31e-27	94.4
MS.gene28863.t1	AT4G34810	69.355	62	15	1	25	82	48	109	1.96e-26	94.4
MS.gene28863.t1	AT4G13790	51.163	86	34	3	6	89	12	91	1.85e-25	90.9
MS.gene28863.t1	AT4G34790	68.657	67	18	2	25	88	39	105	1.88e-25	91.7
MS.gene28863.t1	AT1G75580	67.692	65	20	1	25	89	44	107	4.31e-25	90.5
MS.gene28863.t1	AT4G34780	60.274	73	26	1	22	91	25	97	1.78e-24	89.0
MS.gene28863.t1	AT4G34760	60.606	66	25	1	24	89	42	106	1.43e-23	86.7
MS.gene28863.t1	AT2G21220	58.209	67	27	1	24	90	39	104	4.23e-23	85.5
MS.gene28863.t1	AT4G38860	58.209	67	28	0	24	90	39	105	7.84e-23	84.7
MS.gene28863.t1	AT1G19830	61.194	67	24	2	24	89	47	112	1.04e-20	79.7
MS.gene28863.t1	AT4G36110	48.193	83	40	2	7	87	20	101	1.49e-20	79.0
MS.gene28863.t1	AT2G18010	57.812	64	26	1	24	87	47	109	3.76e-20	78.2
MS.gene28863.t1	AT2G16580	56.061	66	28	1	24	89	43	107	3.82e-20	78.2
MS.gene28863.t1	AT5G66260	44.186	86	45	2	7	90	14	98	3.59e-19	75.5
MS.gene28863.t1	AT3G43120	45.833	72	38	1	14	85	68	138	3.42e-18	74.3
MS.gene28863.t1	AT3G20220	50.000	72	34	2	15	85	37	107	5.26e-18	72.8
MS.gene28863.t1	AT3G61900	41.667	84	45	2	10	90	15	97	2.86e-17	71.6
MS.gene28863.t1	AT5G20810	51.613	62	29	1	24	85	78	138	4.61e-17	71.6
MS.gene28863.t1	AT5G20810	51.613	62	29	1	24	85	78	138	1.07e-16	71.2
MS.gene28863.t1	AT2G46690	43.243	74	38	2	17	87	16	88	1.36e-16	69.3
MS.gene28863.t1	AT4G34750	46.970	66	34	1	22	87	34	98	2.48e-16	69.3
MS.gene28863.t1	AT4G34750	46.970	66	34	1	22	87	34	98	2.48e-16	69.3
MS.gene28863.t1	AT1G75590	47.945	73	37	1	10	82	27	98	3.31e-16	69.3
MS.gene28863.t1	AT5G10990	53.333	60	27	1	23	82	39	97	1.01e-15	67.8
MS.gene28863.t1	AT1G19840	55.000	60	26	1	23	82	39	97	2.13e-15	67.0
MS.gene28863.t1	AT3G60690	45.833	72	35	2	21	89	84	154	2.68e-15	67.4
MS.gene28863.t1	AT4G00880	51.562	64	28	2	24	85	27	89	8.02e-15	64.7
MS.gene28863.t1	AT3G51200	51.667	60	27	2	24	82	38	96	9.35e-15	64.3
MS.gene28863.t1	AT2G45210	43.056	72	37	2	21	89	75	145	3.09e-14	64.3
MS.gene28863.t1	AT5G53590	45.205	73	34	2	24	91	45	116	4.39e-14	63.5
MS.gene28863.t1	AT2G37030	49.153	59	29	1	24	82	48	105	1.41e-13	61.6
MS.gene28863.t1	AT4G31320	44.156	77	36	2	9	85	70	139	3.06e-13	62.4
MS.gene28863.t1	AT2G36210	42.254	71	41	0	15	85	44	114	5.83e-13	60.5
MS.gene28863.t1	AT2G24400	46.269	67	35	1	25	91	64	129	1.24e-12	60.5
MS.gene28863.t1	AT4G12410	46.875	64	30	2	25	85	76	138	1.48e-12	59.7
MS.gene28863.t1	AT3G12830	40.741	81	46	2	10	90	36	114	4.75e-12	58.2
MS.gene28863.t1	AT4G22620	42.647	68	35	2	21	85	75	141	5.89e-12	58.2
MS.gene28863.t1	AT1G56150	46.970	66	34	1	25	90	38	102	1.13e-11	56.6
MS.gene28863.t1	AT3G03847	62.791	43	16	0	43	85	88	130	1.70e-11	56.6
MS.gene28863.t1	AT4G09530	38.158	76	40	3	23	91	26	101	1.93e-11	55.8
MS.gene28863.t1	AT3G53250	40.678	59	31	1	24	82	51	105	3.01e-11	55.8
MS.gene28863.t1	AT1G76190	44.615	65	34	2	21	85	17	79	3.14e-11	55.5
MS.gene28863.t1	AT1G79130	38.554	83	42	2	7	89	38	111	3.33e-11	55.8
MS.gene28863.t1	AT1G16510	42.254	71	40	1	19	89	48	117	6.29e-11	55.5

Find 21 sgRNAs with CRISPR-Local

Find 22 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CATCAAGTGGAAGAAGAATT+TGG	0.262619	3.1:-63235675	MS.gene28863:CDS
GGTTGGTTTAAGTATGATAT+TGG	0.264205	3.1:+63235717	None:intergenic
CTCGTCGAATAACATTTAAA+CGG	0.483768	3.1:+63235838	None:intergenic
TCAAGAATTGCTACATCAAG+TGG	0.492892	3.1:-63235688	MS.gene28863:CDS
CGAAAGACATCTTCAGTACA+AGG	0.497529	3.1:+63235621	None:intergenic
GCAATTCTTGAAACAATGGT+TGG	0.506239	3.1:+63235700	None:intergenic
TACACGGCAACATAGCCCTT+TGG	0.515785	3.1:+63235771	None:intergenic
AGAGAATCAAAAGCGGTTTG+TGG	0.520279	3.1:-63235742	MS.gene28863:CDS
GGCTATGTTGCCGTGTATGT+TGG	0.537170	3.1:-63235765	MS.gene28863:CDS
AAAATTAGCAGAAGTTCCAA+AGG	0.546051	3.1:-63235787	MS.gene28863:CDS
TTGATTCTCTCCAACATACA+CGG	0.573762	3.1:+63235755	None:intergenic
GACATCTTCAGTACAAGGAA+TGG	0.575315	3.1:+63235626	None:intergenic
ATTTGGATATGATCATCCCA+TGG	0.585205	3.1:-63235658	MS.gene28863:CDS
AGGAATGGTGAGGCCACCCA+TGG	0.587754	3.1:+63235641	None:intergenic
TGTAGCAATTCTTGAAACAA+TGG	0.591172	3.1:+63235696	None:intergenic
AAATTAGCAGAAGTTCCAAA+GGG	0.611996	3.1:-63235786	MS.gene28863:CDS
TTTGGATATGATCATCCCAT+GGG	0.624132	3.1:-63235657	MS.gene28863:CDS
GGATATGATCATCCCATGGG+TGG	0.642060	3.1:-63235654	MS.gene28863:CDS
GGAATGGTGAGGCCACCCAT+GGG	0.648249	3.1:+63235642	None:intergenic
CTTCAGTACAAGGAATGGTG+AGG	0.683723	3.1:+63235631	None:intergenic
ATGTTGGAGAGAATCAAAAG+CGG	0.765681	3.1:-63235749	MS.gene28863:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	AAAATTAGCAGAAGTTCCAA+AGG	-	chr3.1:63235649-63235668	MS.gene28863:CDS	30.0%
	AAATTAGCAGAAGTTCCAAA+GGG	-	chr3.1:63235650-63235669	MS.gene28863:CDS	30.0%
	CTCGTCGAATAACATTTAAA+CGG	+	chr3.1:63235601-63235620	None:intergenic	30.0%
	TGTAGCAATTCTTGAAACAA+TGG	+	chr3.1:63235743-63235762	None:intergenic	30.0%
!!	GGTTGGTTTAAGTATGATAT+TGG	+	chr3.1:63235722-63235741	None:intergenic	30.0%
	ATGTTGGAGAGAATCAAAAG+CGG	-	chr3.1:63235687-63235706	MS.gene28863:CDS	35.0%
	ATTTGGATATGATCATCCCA+TGG	-	chr3.1:63235778-63235797	MS.gene28863:CDS	35.0%
	CATCAAGTGGAAGAAGAATT+TGG	-	chr3.1:63235761-63235780	MS.gene28863:CDS	35.0%
	GCAATTCTTGAAACAATGGT+TGG	+	chr3.1:63235739-63235758	None:intergenic	35.0%
	TCAAGAATTGCTACATCAAG+TGG	-	chr3.1:63235748-63235767	MS.gene28863:CDS	35.0%
	TTGATTCTCTCCAACATACA+CGG	+	chr3.1:63235684-63235703	None:intergenic	35.0%
	TTTGGATATGATCATCCCAT+GGG	-	chr3.1:63235779-63235798	MS.gene28863:CDS	35.0%
	AGAGAATCAAAAGCGGTTTG+TGG	-	chr3.1:63235694-63235713	MS.gene28863:CDS	40.0%
	CGAAAGACATCTTCAGTACA+AGG	+	chr3.1:63235818-63235837	None:intergenic	40.0%
	GACATCTTCAGTACAAGGAA+TGG	+	chr3.1:63235813-63235832	None:intergenic	40.0%
!!!	CTGCTAATTTTAGAGCTGCT+TGG	+	chr3.1:63235640-63235659	None:intergenic	40.0%
	CTTCAGTACAAGGAATGGTG+AGG	+	chr3.1:63235808-63235827	None:intergenic	45.0%
	GGATATGATCATCCCATGGG+TGG	-	chr3.1:63235782-63235801	MS.gene28863:CDS	50.0%
	GGCTATGTTGCCGTGTATGT+TGG	-	chr3.1:63235671-63235690	MS.gene28863:CDS	50.0%
	TACACGGCAACATAGCCCTT+TGG	+	chr3.1:63235668-63235687	None:intergenic	50.0%
	AGGAATGGTGAGGCCACCCA+TGG	+	chr3.1:63235798-63235817	None:intergenic	60.0%
	GGAATGGTGAGGCCACCCAT+GGG	+	chr3.1:63235797-63235816	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.1	gene	63235590	63235868	63235590	ID=MS.gene28863
chr3.1	mRNA	63235590	63235868	63235590	ID=MS.gene28863.t1;Parent=MS.gene28863
chr3.1	exon	63235590	63235868	63235590	ID=MS.gene28863.t1.exon1;Parent=MS.gene28863.t1
chr3.1	CDS	63235590	63235868	63235590	ID=cds.MS.gene28863.t1;Parent=MS.gene28863.t1

Gene Sequence	>MS.gene28863 ATGGGTTTCCGTTTAAATGTTATTCGACGAGCATCATTCACAGCTAGCCAAGCAGCTCTAAAATTAGCAGAAGTTCCAAAGGGCTATGTTGCCGTGTATGTTGGAGAGAATCAAAAGCGGTTTGTGGTTCCAATATCATACTTAAACCAACCATTGTTTCAAGAATTGCTACATCAAGTGGAAGAAGAATTTGGATATGATCATCCCATGGGTGGCCTCACCATTCCTTGTACTGAAGATGTCTTTCGACACATAACTTCTCACTTGAATGAGCTATGA
Protein sequence	>MS.gene28863.t1 MGFRLNVIRRASFTASQAALKLAEVPKGYVAVYVGENQKRFVVPISYLNQPLFQELLHQVEEEFGYDHPMGGLTIPCTEDVFRHITSHLNEL