Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49146.t1 | AIT98181.1 | 99.4 | 309 | 2 | 0 | 1 | 309 | 1 | 309 | 1.30E-172 | 615.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49146.t1 | O49814 | 69.2 | 299 | 87 | 4 | 7 | 304 | 17 | 311 | 4.5e-113 | 409.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49146.t1 | A0A097KXR0 | 99.4 | 309 | 2 | 0 | 1 | 309 | 1 | 309 | 9.5e-173 | 615.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049217 | MS.gene49146 | 0.861328 | 1.11E-63 | -1.69E-46 |
| MS.gene049222 | MS.gene49146 | 0.815647 | 8.31E-52 | -1.69E-46 |
| MS.gene049232 | MS.gene49146 | 0.819695 | 1.01E-52 | -1.69E-46 |
| MS.gene049285 | MS.gene49146 | 0.834369 | 3.12E-56 | -1.69E-46 |
| MS.gene049320 | MS.gene49146 | 0.850124 | 2.08E-60 | -1.69E-46 |
| MS.gene049369 | MS.gene49146 | 0.820766 | 5.77E-53 | -1.69E-46 |
| MS.gene049396 | MS.gene49146 | 0.80162 | 8.26E-49 | -1.69E-46 |
| MS.gene049805 | MS.gene49146 | 0.816659 | 4.93E-52 | -1.69E-46 |
| MS.gene049828 | MS.gene49146 | 0.830549 | 2.76E-55 | -1.69E-46 |
| MS.gene05010 | MS.gene49146 | 0.804374 | 2.23E-49 | -1.69E-46 |
| MS.gene050163 | MS.gene49146 | 0.831487 | 1.62E-55 | -1.69E-46 |
| MS.gene050165 | MS.gene49146 | 0.829923 | 3.92E-55 | -1.69E-46 |
| MS.gene050216 | MS.gene49146 | 0.810258 | 1.26E-50 | -1.69E-46 |
| MS.gene050333 | MS.gene49146 | 0.842167 | 3.05E-58 | -1.69E-46 |
| MS.gene050504 | MS.gene49146 | 0.816359 | 5.76E-52 | -1.69E-46 |
| MS.gene050518 | MS.gene49146 | 0.831666 | 1.47E-55 | -1.69E-46 |
| MS.gene050593 | MS.gene49146 | 0.806243 | 9.04E-50 | -1.69E-46 |
| MS.gene050612 | MS.gene49146 | 0.818678 | 1.73E-52 | -1.69E-46 |
| MS.gene050662 | MS.gene49146 | 0.820498 | 6.65E-53 | -1.69E-46 |
| MS.gene050675 | MS.gene49146 | 0.832765 | 7.84E-56 | -1.69E-46 |
| MS.gene050686 | MS.gene49146 | 0.828504 | 8.66E-55 | -1.69E-46 |
| MS.gene050767 | MS.gene49146 | 0.831061 | 2.07E-55 | -1.69E-46 |
| MS.gene050770 | MS.gene49146 | 0.831678 | 1.46E-55 | -1.69E-46 |
| MS.gene050772 | MS.gene49146 | 0.836938 | 6.98E-57 | -1.69E-46 |
| MS.gene050986 | MS.gene49146 | 0.809677 | 1.68E-50 | -1.69E-46 |
| MS.gene051228 | MS.gene49146 | 0.844444 | 7.53E-59 | -1.69E-46 |
| MS.gene051551 | MS.gene49146 | 0.804904 | 1.73E-49 | -1.69E-46 |
| MS.gene051692 | MS.gene49146 | 0.801763 | 7.72E-49 | -1.69E-46 |
| MS.gene051810 | MS.gene49146 | 0.824679 | 7.08E-54 | -1.69E-46 |
| MS.gene051858 | MS.gene49146 | 0.81029 | 1.24E-50 | -1.69E-46 |
| MS.gene052271 | MS.gene49146 | 0.837105 | 6.33E-57 | -1.69E-46 |
| MS.gene052379 | MS.gene49146 | 0.859782 | 3.26E-63 | -1.69E-46 |
| MS.gene052421 | MS.gene49146 | 0.801864 | 7.36E-49 | -1.69E-46 |
| MS.gene052916 | MS.gene49146 | 0.829992 | 3.77E-55 | -1.69E-46 |
| MS.gene053018 | MS.gene49146 | 0.822423 | 2.39E-53 | -1.69E-46 |
| MS.gene053104 | MS.gene49146 | 0.824576 | 7.49E-54 | -1.69E-46 |
| MS.gene053213 | MS.gene49146 | 0.847033 | 1.49E-59 | -1.69E-46 |
| MS.gene053286 | MS.gene49146 | 0.839268 | 1.75E-57 | -1.69E-46 |
| MS.gene053322 | MS.gene49146 | 0.820067 | 8.34E-53 | -1.69E-46 |
| MS.gene053384 | MS.gene49146 | 0.801631 | 8.22E-49 | -1.69E-46 |
| MS.gene053449 | MS.gene49146 | 0.801184 | 1.01E-48 | -1.69E-46 |
| MS.gene053574 | MS.gene49146 | 0.818781 | 1.64E-52 | -1.69E-46 |
| MS.gene053632 | MS.gene49146 | 0.814188 | 1.75E-51 | -1.69E-46 |
| MS.gene053813 | MS.gene49146 | 0.828803 | 7.34E-55 | -1.69E-46 |
| MS.gene053916 | MS.gene49146 | 0.816427 | 5.56E-52 | -1.69E-46 |
| MS.gene054003 | MS.gene49146 | 0.80374 | 3.02E-49 | -1.69E-46 |
| MS.gene054376 | MS.gene49146 | 0.823023 | 1.73E-53 | -1.69E-46 |
| MS.gene054595 | MS.gene49146 | 0.806587 | 7.65E-50 | -1.69E-46 |
| MS.gene054642 | MS.gene49146 | 0.852492 | 4.45E-61 | -1.69E-46 |
| MS.gene054804 | MS.gene49146 | 0.800946 | 1.14E-48 | -1.69E-46 |
| MS.gene054954 | MS.gene49146 | 0.81439 | 1.58E-51 | -1.69E-46 |
| MS.gene05505 | MS.gene49146 | 0.845914 | 3.02E-59 | -1.69E-46 |
| MS.gene055362 | MS.gene49146 | 0.812563 | 3.98E-51 | -1.69E-46 |
| MS.gene055397 | MS.gene49146 | 0.826335 | 2.87E-54 | -1.69E-46 |
| MS.gene055499 | MS.gene49146 | 0.839343 | 1.68E-57 | -1.69E-46 |
| MS.gene055502 | MS.gene49146 | 0.826258 | 2.99E-54 | -1.69E-46 |
| MS.gene055634 | MS.gene49146 | 0.800534 | 1.38E-48 | -1.69E-46 |
| MS.gene055636 | MS.gene49146 | 0.852494 | 4.45E-61 | -1.69E-46 |
| MS.gene055638 | MS.gene49146 | 0.845281 | 4.48E-59 | -1.69E-46 |
| MS.gene055647 | MS.gene49146 | 0.836145 | 1.11E-56 | -1.69E-46 |
| MS.gene055722 | MS.gene49146 | 0.823295 | 1.50E-53 | -1.69E-46 |
| MS.gene05592 | MS.gene49146 | 0.880722 | 4.34E-70 | -1.69E-46 |
| MS.gene055941 | MS.gene49146 | 0.817384 | 3.39E-52 | -1.69E-46 |
| MS.gene056374 | MS.gene49146 | 0.825589 | 4.32E-54 | -1.69E-46 |
| MS.gene056422 | MS.gene49146 | 0.829541 | 4.86E-55 | -1.69E-46 |
| MS.gene056487 | MS.gene49146 | 0.826881 | 2.13E-54 | -1.69E-46 |
| MS.gene056549 | MS.gene49146 | 0.835037 | 2.12E-56 | -1.69E-46 |
| MS.gene056657 | MS.gene49146 | 0.856869 | 2.40E-62 | -1.69E-46 |
| MS.gene057076 | MS.gene49146 | 0.802733 | 4.88E-49 | -1.69E-46 |
| MS.gene057129 | MS.gene49146 | 0.835043 | 2.11E-56 | -1.69E-46 |
| MS.gene057146 | MS.gene49146 | 0.821911 | 3.14E-53 | -1.69E-46 |
| MS.gene057331 | MS.gene49146 | 0.820671 | 6.06E-53 | -1.69E-46 |
| MS.gene05735 | MS.gene49146 | 0.82129 | 4.37E-53 | -1.69E-46 |
| MS.gene057416 | MS.gene49146 | 0.849508 | 3.09E-60 | -1.69E-46 |
| MS.gene057926 | MS.gene49146 | 0.870556 | 1.33E-66 | -1.69E-46 |
| MS.gene057927 | MS.gene49146 | 0.806216 | 9.16E-50 | -1.69E-46 |
| MS.gene058019 | MS.gene49146 | 0.807226 | 5.60E-50 | -1.69E-46 |
| MS.gene058323 | MS.gene49146 | 0.803521 | 3.35E-49 | -1.69E-46 |
| MS.gene058419 | MS.gene49146 | 0.83477 | 2.47E-56 | -1.69E-46 |
| MS.gene058459 | MS.gene49146 | 0.827932 | 1.19E-54 | -1.69E-46 |
| MS.gene058773 | MS.gene49146 | 0.817026 | 4.08E-52 | -1.69E-46 |
| MS.gene058840 | MS.gene49146 | -0.812055 | 5.14E-51 | -1.69E-46 |
| MS.gene058903 | MS.gene49146 | 0.801272 | 9.73E-49 | -1.69E-46 |
| MS.gene059022 | MS.gene49146 | 0.800745 | 1.25E-48 | -1.69E-46 |
| MS.gene059029 | MS.gene49146 | 0.841185 | 5.54E-58 | -1.69E-46 |
| MS.gene05913 | MS.gene49146 | 0.832805 | 7.66E-56 | -1.69E-46 |
| MS.gene059305 | MS.gene49146 | 0.803821 | 2.90E-49 | -1.69E-46 |
| MS.gene05934 | MS.gene49146 | 0.833386 | 5.49E-56 | -1.69E-46 |
| MS.gene059367 | MS.gene49146 | 0.813727 | 2.21E-51 | -1.69E-46 |
| MS.gene059536 | MS.gene49146 | 0.808875 | 2.50E-50 | -1.69E-46 |
| MS.gene059677 | MS.gene49146 | 0.822186 | 2.71E-53 | -1.69E-46 |
| MS.gene059711 | MS.gene49146 | 0.84568 | 3.49E-59 | -1.69E-46 |
| MS.gene059718 | MS.gene49146 | 0.822821 | 1.93E-53 | -1.69E-46 |
| MS.gene059865 | MS.gene49146 | 0.806694 | 7.27E-50 | -1.69E-46 |
| MS.gene059902 | MS.gene49146 | 0.805837 | 1.10E-49 | -1.69E-46 |
| MS.gene059960 | MS.gene49146 | 0.827994 | 1.15E-54 | -1.69E-46 |
| MS.gene060482 | MS.gene49146 | 0.825238 | 5.23E-54 | -1.69E-46 |
| MS.gene060804 | MS.gene49146 | 0.857971 | 1.13E-62 | -1.69E-46 |
| MS.gene060818 | MS.gene49146 | 0.869415 | 3.15E-66 | -1.69E-46 |
| MS.gene061041 | MS.gene49146 | 0.839937 | 1.18E-57 | -1.69E-46 |
| MS.gene061134 | MS.gene49146 | 0.954459 | 2.82E-112 | -1.69E-46 |
| MS.gene061200 | MS.gene49146 | 0.861986 | 6.98E-64 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene36168 | MS.gene49146 | PPI |
| MS.gene49146 | MS.gene93230 | PPI |
| MS.gene49146 | MS.gene010815 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49146.t1 | MTR_1g100070 | 88.673 | 309 | 22 | 2 | 1 | 309 | 1 | 296 | 0.0 | 520 |
| MS.gene49146.t1 | MTR_1g100070 | 82.282 | 333 | 22 | 3 | 1 | 309 | 1 | 320 | 0.0 | 507 |
| MS.gene49146.t1 | MTR_1g100070 | 86.842 | 266 | 22 | 2 | 1 | 266 | 1 | 253 | 1.83e-163 | 456 |
| MS.gene49146.t1 | MTR_6g048440 | 72.785 | 316 | 76 | 4 | 1 | 309 | 1 | 313 | 1.58e-157 | 442 |
| MS.gene49146.t1 | MTR_6g048440 | 72.165 | 291 | 71 | 4 | 1 | 284 | 1 | 288 | 9.56e-151 | 426 |
| MS.gene49146.t1 | MTR_6g048440 | 70.330 | 273 | 71 | 4 | 1 | 266 | 1 | 270 | 2.05e-136 | 388 |
| MS.gene49146.t1 | MTR_6g048440 | 67.391 | 230 | 65 | 4 | 1 | 223 | 1 | 227 | 1.66e-105 | 308 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49146.t1 | AT4G25700 | 65.924 | 314 | 89 | 5 | 1 | 309 | 1 | 301 | 5.79e-145 | 410 |
| MS.gene49146.t1 | AT5G52570 | 66.984 | 315 | 78 | 7 | 1 | 307 | 1 | 297 | 1.91e-135 | 386 |
| MS.gene49146.t1 | AT4G25700 | 59.211 | 228 | 75 | 5 | 1 | 223 | 1 | 215 | 1.52e-85 | 256 |
| MS.gene49146.t1 | AT4G25700 | 59.211 | 228 | 75 | 5 | 1 | 223 | 1 | 215 | 1.52e-85 | 256 |
| MS.gene49146.t1 | AT5G52570 | 39.228 | 311 | 102 | 10 | 1 | 307 | 1 | 228 | 3.00e-43 | 148 |
Find 85 sgRNAs with CRISPR-Local
Find 163 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGGAGATTGTAGGGCTTTA+AGG | 0.141087 | 1.3:-68778400 | None:intergenic |
| TTTAGGTAGGTATGGAATAT+TGG | 0.214997 | 1.3:+68779132 | MS.gene49146:intron |
| TTCATCTGGTTAGTGTGTTT+TGG | 0.260989 | 1.3:-68778567 | None:intergenic |
| GGTCTTGGAATTACGGTGTT+TGG | 0.277671 | 1.3:+68779720 | MS.gene49146:CDS |
| GCAATTGCTCTTCTCTCATA+TGG | 0.287011 | 1.3:+68779500 | MS.gene49146:CDS |
| TTCTTGTTCTTTGGGTTTGA+AGG | 0.312771 | 1.3:-68778506 | None:intergenic |
| TAGCTTTGGTGTTACCTCTA+TGG | 0.317708 | 1.3:+68778707 | MS.gene49146:CDS |
| TGAGGGCTGGGTTTACTGTT+AGG | 0.327820 | 1.3:-68778612 | None:intergenic |
| TTAGGTAGGTATGGAATATT+GGG | 0.328698 | 1.3:+68779133 | MS.gene49146:intron |
| CTTCGCCGTTTGTGTTCTAA+TGG | 0.356361 | 1.3:+68778539 | MS.gene49146:CDS |
| GCTTTGACGGAAACCTCTTA+AGG | 0.362182 | 1.3:-68778478 | None:intergenic |
| GTCTTGGAATTACGGTGTTT+GGG | 0.363241 | 1.3:+68779721 | MS.gene49146:CDS |
| GATGGGCTCATGAGGTTCTA+TGG | 0.363709 | 1.3:+68779159 | MS.gene49146:CDS |
| TGACTAGGGTCTTGGAATTA+CGG | 0.376865 | 1.3:+68779713 | MS.gene49146:intron |
| TGAGGGTTGGAGGAGATTGT+AGG | 0.377556 | 1.3:-68778409 | None:intergenic |
| TTGGTGCCTGGTCTCTGCTT+TGG | 0.387095 | 1.3:+68779539 | MS.gene49146:CDS |
| GGGAAGAAGTTGAGGGTTGG+AGG | 0.387923 | 1.3:-68778419 | None:intergenic |
| GTATGGAATATTGGGCTAGA+TGG | 0.394991 | 1.3:+68779141 | MS.gene49146:CDS |
| CTTTGACGGAAACCTCTTAA+GGG | 0.408864 | 1.3:-68778477 | None:intergenic |
| GTTCCTTGGTCTGAAATGTT+TGG | 0.410492 | 1.3:+68779000 | MS.gene49146:CDS |
| AGGGAAGGGGAAGAAGTTGA+GGG | 0.413157 | 1.3:-68778426 | None:intergenic |
| TCATCTTATGACTAGGGTCT+TGG | 0.416939 | 1.3:+68779705 | MS.gene49146:intron |
| TTTAACAAGGGATTGGTGCC+TGG | 0.432109 | 1.3:+68779527 | MS.gene49146:CDS |
| AAGGGAAGGGGAAGAAGTTG+AGG | 0.434588 | 1.3:-68778427 | None:intergenic |
| GGCACATTTGCCCTCTCAGT+TGG | 0.435097 | 1.3:+68779021 | MS.gene49146:CDS |
| CATGTTTGTCCATGATGGAT+TGG | 0.437840 | 1.3:+68779752 | MS.gene49146:CDS |
| TTATAGATTCTCATGGCAAA+TGG | 0.438735 | 1.3:+68778746 | MS.gene49146:CDS |
| AAAACATCATTAAGCTCAAA+TGG | 0.441795 | 1.3:-68779455 | None:intergenic |
| CCCCTTTGAATTTGTCCGAA+TGG | 0.445592 | 1.3:-68780012 | None:intergenic |
| GAGGGTTGGAGGAGATTGTA+GGG | 0.445723 | 1.3:-68778408 | None:intergenic |
| GGGCTTTAAGGTTGTGGCGG+TGG | 0.448289 | 1.3:-68778388 | None:intergenic |
| GCCTACATGTTTGTCCATGA+TGG | 0.451700 | 1.3:+68779747 | MS.gene49146:CDS |
| AGCTCAAATGGTCCCTCTCT+TGG | 0.457561 | 1.3:-68779443 | None:intergenic |
| AGGGTAGTGGAGAGGTTCCT+TGG | 0.458584 | 1.3:+68778986 | MS.gene49146:intron |
| TTGTTTGCAGCTCCACCATT+CGG | 0.466820 | 1.3:+68779997 | MS.gene49146:intron |
| AGCTAGAGAAAGAGATAAGT+AGG | 0.469767 | 1.3:+68780485 | MS.gene49146:CDS |
| AACAGCTAAGATTGCCATAG+AGG | 0.474363 | 1.3:-68778721 | None:intergenic |
| AAATTCAAAGGGGTGCCATA+TGG | 0.476176 | 1.3:+68780022 | MS.gene49146:CDS |
| ACCATTCGGACAAATTCAAA+GGG | 0.476981 | 1.3:+68780011 | MS.gene49146:CDS |
| GCAGCTGTAATGTCTAGCTT+TGG | 0.479617 | 1.3:+68778693 | MS.gene49146:CDS |
| TATGAGAGAAGAGCAATTGC+AGG | 0.484302 | 1.3:-68779497 | None:intergenic |
| AAGGGGAAGAAGTTGAGGGT+TGG | 0.489955 | 1.3:-68778422 | None:intergenic |
| GAAGTAGGGCACGTTGGCAA+TGG | 0.491586 | 1.3:-68779799 | None:intergenic |
| AGACCTCATGCATGTGCCAC+AGG | 0.495599 | 1.3:-68779190 | None:intergenic |
| ACGTTGGCAATGGGACCCAC+AGG | 0.500337 | 1.3:-68779789 | None:intergenic |
| AGCAGCAACTCTTGTGAAGT+AGG | 0.501312 | 1.3:-68779814 | None:intergenic |
| ATCTTCCATTAGAACACAAA+CGG | 0.501608 | 1.3:-68778544 | None:intergenic |
| ATTGTAGGGCTTTAAGGTTG+TGG | 0.501902 | 1.3:-68778394 | None:intergenic |
| TATGGAATATTGGGCTAGAT+GGG | 0.511988 | 1.3:+68779142 | MS.gene49146:CDS |
| AAGTAGGGCACGTTGGCAAT+GGG | 0.513920 | 1.3:-68779798 | None:intergenic |
| CACCATTCGGACAAATTCAA+AGG | 0.517507 | 1.3:+68780010 | MS.gene49146:CDS |
| CTTTGAATTTGTCCGAATGG+TGG | 0.523450 | 1.3:-68780009 | None:intergenic |
| GTGCAGGAAGTTGAAGAAGT+GGG | 0.525266 | 1.3:+68780451 | MS.gene49146:intron |
| CTGTTTATTATAGATTCTCA+TGG | 0.538973 | 1.3:+68778739 | MS.gene49146:CDS |
| GGTGCAGGAAGTTGAAGAAG+TGG | 0.541999 | 1.3:+68780450 | MS.gene49146:intron |
| GGGCTGGGTTTACTGTTAGG+AGG | 0.546115 | 1.3:-68778609 | None:intergenic |
| TCTTATGAACCAATCCATCA+TGG | 0.562531 | 1.3:-68779761 | None:intergenic |
| TTCCCTGTGGCACATGCATG+AGG | 0.571758 | 1.3:+68779187 | MS.gene49146:CDS |
| TTGTTTGTATGATAGGGTAG+TGG | 0.576953 | 1.3:+68778973 | MS.gene49146:intron |
| GGTGGAAAGTTCAGCCGCCA+TGG | 0.584774 | 1.3:-68778370 | None:intergenic |
| GCAGCAACTCTTGTGAAGTA+GGG | 0.586414 | 1.3:-68779813 | None:intergenic |
| CAGGAAGTTGAAGAAGTGGG+AGG | 0.586564 | 1.3:+68780454 | MS.gene49146:intron |
| TAGACATTACAGCTGCAACT+AGG | 0.594222 | 1.3:-68778686 | None:intergenic |
| AGGAAGTTGAAGAAGTGGGA+GGG | 0.595124 | 1.3:+68780455 | MS.gene49146:intron |
| GTCACATCATCGACCAAGAG+AGG | 0.605840 | 1.3:+68779430 | MS.gene49146:intron |
| TTGGGCTAGATGGGCTCATG+AGG | 0.606671 | 1.3:+68779151 | MS.gene49146:CDS |
| TTTGACGGAAACCTCTTAAG+GGG | 0.612223 | 1.3:-68778476 | None:intergenic |
| TACAGCAGCACCAACTGAGA+GGG | 0.619847 | 1.3:-68779031 | None:intergenic |
| TTCTATGGCATGCTTCCCTG+TGG | 0.625607 | 1.3:+68779174 | MS.gene49146:CDS |
| GACCTCATGCATGTGCCACA+GGG | 0.632725 | 1.3:-68779189 | None:intergenic |
| TGTATGATAGGGTAGTGGAG+AGG | 0.645728 | 1.3:+68778978 | MS.gene49146:intron |
| TAGATTCTCATGGCAAATGG+AGG | 0.648620 | 1.3:+68778749 | MS.gene49146:CDS |
| ACTGCACCAAAGCAGAGACC+AGG | 0.649131 | 1.3:-68779545 | None:intergenic |
| TCCATCATGGACAAACATGT+AGG | 0.652573 | 1.3:-68779748 | None:intergenic |
| GTAGGGCTTTAAGGTTGTGG+CGG | 0.654013 | 1.3:-68778391 | None:intergenic |
| TCACATCATCGACCAAGAGA+GGG | 0.657623 | 1.3:+68779431 | MS.gene49146:CDS |
| TTGACGGAAACCTCTTAAGG+GGG | 0.658125 | 1.3:-68778475 | None:intergenic |
| GTGCCAAACATTTCAGACCA+AGG | 0.665898 | 1.3:-68779003 | None:intergenic |
| TTACAGCAGCACCAACTGAG+AGG | 0.672349 | 1.3:-68779032 | None:intergenic |
| TCTTGTGAAGTAGGGCACGT+TGG | 0.672979 | 1.3:-68779805 | None:intergenic |
| CGTTGGCAATGGGACCCACA+GGG | 0.676768 | 1.3:-68779788 | None:intergenic |
| GGTTCATAAGAGATTCCCTG+TGG | 0.688013 | 1.3:+68779773 | MS.gene49146:CDS |
| CACTAACCAGATGAAAACAG+AGG | 0.697643 | 1.3:+68778575 | MS.gene49146:CDS |
| GTTCATAAGAGATTCCCTGT+GGG | 0.700599 | 1.3:+68779774 | MS.gene49146:CDS |
| CCATTCGGACAAATTCAAAG+GGG | 0.749285 | 1.3:+68780012 | MS.gene49146:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATGAAATTGGTTAATTT+TGG | + | chr1.3:68779086-68779105 | MS.gene49146:intron | 15.0% |
| !!! | AATTCAACATTGATTTTTTT+AGG | + | chr1.3:68779115-68779134 | MS.gene49146:intron | 15.0% |
| !!! | ATTTTTATTTTTTGTGCAAA+TGG | + | chr1.3:68779944-68779963 | MS.gene49146:intron | 15.0% |
| !!! | TTTTTATTTTTTGTGCAAAT+GGG | + | chr1.3:68779945-68779964 | MS.gene49146:intron | 15.0% |
| !! | TAAACAAAAGAAAATATGAG+TGG | + | chr1.3:68779902-68779921 | MS.gene49146:intron | 20.0% |
| !! | TTAGTAAATCCCTTAATTAA+CGG | + | chr1.3:68779597-68779616 | MS.gene49146:intron | 20.0% |
| !!! | ATTTTTAGTTGCACAAAAAT+TGG | + | chr1.3:68778635-68778654 | MS.gene49146:CDS | 20.0% |
| !!! | TCATATGGTTTTTTTAACAA+GGG | + | chr1.3:68779515-68779534 | MS.gene49146:CDS | 20.0% |
| ! | AAAACATCATTAAGCTCAAA+TGG | - | chr1.3:68779458-68779477 | None:intergenic | 25.0% |
| ! | ACAAAAAAAAAACCAAGAAG+AGG | - | chr1.3:68780086-68780105 | None:intergenic | 25.0% |
| ! | ATGTGAAAGAAAAGAGAAAA+TGG | - | chr1.3:68779240-68779259 | None:intergenic | 25.0% |
| ! | ATGTGAATAAACAAATGCAT+TGG | + | chr1.3:68779286-68779305 | MS.gene49146:intron | 25.0% |
| ! | CAAAAAAAAAACCAAGAAGA+GGG | - | chr1.3:68780085-68780104 | None:intergenic | 25.0% |
| ! | CTGTTTATTATAGATTCTCA+TGG | + | chr1.3:68778739-68778758 | MS.gene49146:CDS | 25.0% |
| ! | GATTATTCATCAATTAAGTG+TGG | + | chr1.3:68780176-68780195 | MS.gene49146:intron | 25.0% |
| ! | TCAAGCAATTCTTAATTACT+TGG | - | chr1.3:68779845-68779864 | None:intergenic | 25.0% |
| ! | TCAGCAATTGAAAATGAAAT+TGG | + | chr1.3:68779076-68779095 | MS.gene49146:intron | 25.0% |
| ! | TCATTTCAGAGAATAAATCA+GGG | - | chr1.3:68779680-68779699 | None:intergenic | 25.0% |
| ! | TGTGAAAGAAAAGAGAAAAT+GGG | - | chr1.3:68779239-68779258 | None:intergenic | 25.0% |
| ! | TTTGTGCAACTAAAAATTGA+GGG | - | chr1.3:68778632-68778651 | None:intergenic | 25.0% |
| !! | TTTTGTGCAACTAAAAATTG+AGG | - | chr1.3:68778633-68778652 | None:intergenic | 25.0% |
| !!! | ATCGTTTTTTGAATGATGTT+TGG | + | chr1.3:68778949-68778968 | MS.gene49146:intron | 25.0% |
| !!! | CAACATTGATTTTTTTAGGT+AGG | + | chr1.3:68779119-68779138 | MS.gene49146:intron | 25.0% |
| !!! | CTCATATGGTTTTTTTAACA+AGG | + | chr1.3:68779514-68779533 | MS.gene49146:CDS | 25.0% |
| !!! | TCGTTTTTTGAATGATGTTT+GGG | + | chr1.3:68778950-68778969 | MS.gene49146:intron | 25.0% |
| !!! | TGTTGATTTTCTTGTTCTTT+GGG | - | chr1.3:68778517-68778536 | None:intergenic | 25.0% |
| !!! | TTGATTTTTTTAGGTAGGTA+TGG | + | chr1.3:68779124-68779143 | MS.gene49146:intron | 25.0% |
| ATCTTCCATTAGAACACAAA+CGG | - | chr1.3:68778547-68778566 | None:intergenic | 30.0% | |
| CAAACAAACAACAAAACCAA+AGG | - | chr1.3:68779984-68780003 | None:intergenic | 30.0% | |
| CATCTTTGATTCAATGCTAT+TGG | - | chr1.3:68779394-68779413 | None:intergenic | 30.0% | |
| CCAATGAAACCGTTAATTAA+GGG | - | chr1.3:68779609-68779628 | None:intergenic | 30.0% | |
| CCTTAATTAACGGTTTCATT+GGG | + | chr1.3:68779607-68779626 | MS.gene49146:intron | 30.0% | |
| GATTCAATGCTATTGGTATA+AGG | - | chr1.3:68779387-68779406 | None:intergenic | 30.0% | |
| GTCATTTCAGAGAATAAATC+AGG | - | chr1.3:68779681-68779700 | None:intergenic | 30.0% | |
| TTAGGTAGGTATGGAATATT+GGG | + | chr1.3:68779133-68779152 | MS.gene49146:intron | 30.0% | |
| TTATAGATTCTCATGGCAAA+TGG | + | chr1.3:68778746-68778765 | MS.gene49146:CDS | 30.0% | |
| TTTAGGTAGGTATGGAATAT+TGG | + | chr1.3:68779132-68779151 | MS.gene49146:intron | 30.0% | |
| TTTCAGCTCCTACAAAATTA+CGG | - | chr1.3:68778834-68778853 | None:intergenic | 30.0% | |
| ! | ATTTGACACCGTAATTTTGT+AGG | + | chr1.3:68778823-68778842 | MS.gene49146:intron | 30.0% |
| ! | CAAATTTGGATGCATTTTGT+GGG | + | chr1.3:68780397-68780416 | MS.gene49146:intron | 30.0% |
| ! | GCAAAATATTCAAGTTAGCA+TGG | - | chr1.3:68779365-68779384 | None:intergenic | 30.0% |
| ! | TAAGTGCATGTTTGAAATGA+CGG | - | chr1.3:68778914-68778933 | None:intergenic | 30.0% |
| ! | TTTGAAGGATTTTGCTTTGA+CGG | - | chr1.3:68778494-68778513 | None:intergenic | 30.0% |
| !! | TTTGGGTTGTTTGTATGATA+GGG | + | chr1.3:68778967-68778986 | MS.gene49146:intron | 30.0% |
| !!! | GTGTTGATTTTCTTGTTCTT+TGG | - | chr1.3:68778518-68778537 | None:intergenic | 30.0% |
| !!! | TGGTTTTTTTAACAAGGGAT+TGG | + | chr1.3:68779520-68779539 | MS.gene49146:CDS | 30.0% |
| AAAAGAGAAAATGGGAAGAC+TGG | - | chr1.3:68779231-68779250 | None:intergenic | 35.0% | |
| ACATCCTCATCTTATGACTA+GGG | + | chr1.3:68779699-68779718 | MS.gene49146:intron | 35.0% | |
| ACCATTCGGACAAATTCAAA+GGG | + | chr1.3:68780011-68780030 | MS.gene49146:CDS | 35.0% | |
| ACTCTGATACACACTTGATT+CGG | + | chr1.3:68778879-68778898 | MS.gene49146:intron | 35.0% | |
| AGCTAGAGAAAGAGATAAGT+AGG | + | chr1.3:68780485-68780504 | MS.gene49146:CDS | 35.0% | |
| CCACAAAATGCATCCAAATT+TGG | - | chr1.3:68780399-68780418 | None:intergenic | 35.0% | |
| CCCAATGAAACCGTTAATTA+AGG | - | chr1.3:68779610-68779629 | None:intergenic | 35.0% | |
| CCCTTAATTAACGGTTTCAT+TGG | + | chr1.3:68779606-68779625 | MS.gene49146:intron | 35.0% | |
| TCTTATGAACCAATCCATCA+TGG | - | chr1.3:68779764-68779783 | None:intergenic | 35.0% | |
| TGTGCAAATGGGATCTAATT+TGG | + | chr1.3:68779956-68779975 | MS.gene49146:intron | 35.0% | |
| TGTGGAGAAAAGAGAAAAAC+TGG | + | chr1.3:68780194-68780213 | MS.gene49146:intron | 35.0% | |
| TTGTTTGTATGATAGGGTAG+TGG | + | chr1.3:68778973-68778992 | MS.gene49146:intron | 35.0% | |
| ! | CCAAATTTGGATGCATTTTG+TGG | + | chr1.3:68780396-68780415 | MS.gene49146:intron | 35.0% |
| ! | TATGGAATATTGGGCTAGAT+GGG | + | chr1.3:68779142-68779161 | MS.gene49146:CDS | 35.0% |
| ! | TTCATCTGGTTAGTGTGTTT+TGG | - | chr1.3:68778570-68778589 | None:intergenic | 35.0% |
| ! | TTCTTGTTCTTTGGGTTTGA+AGG | - | chr1.3:68778509-68778528 | None:intergenic | 35.0% |
| ! | TTTCTTCCTCTGTTTTCATC+TGG | - | chr1.3:68778584-68778603 | None:intergenic | 35.0% |
| !! | GTTTGGGTTGTTTGTATGAT+AGG | + | chr1.3:68778966-68778985 | MS.gene49146:intron | 35.0% |
| AACAGCTAAGATTGCCATAG+AGG | - | chr1.3:68778724-68778743 | None:intergenic | 40.0% | |
| AAGAAGAGGGAATGTGAATG+TGG | - | chr1.3:68780072-68780091 | None:intergenic | 40.0% | |
| AAGACCCTAGTCATAAGATG+AGG | - | chr1.3:68779706-68779725 | None:intergenic | 40.0% | |
| ACATTCACATTCCCTCTTCT+TGG | + | chr1.3:68780071-68780090 | MS.gene49146:intron | 40.0% | |
| CACCATTCGGACAAATTCAA+AGG | + | chr1.3:68780010-68780029 | MS.gene49146:CDS | 40.0% | |
| CACTAACCAGATGAAAACAG+AGG | + | chr1.3:68778575-68778594 | MS.gene49146:CDS | 40.0% | |
| CCATTCGGACAAATTCAAAG+GGG | + | chr1.3:68780012-68780031 | MS.gene49146:CDS | 40.0% | |
| CTAGTTGAGTAGTACTTGTG+GGG | + | chr1.3:68780277-68780296 | MS.gene49146:intron | 40.0% | |
| CTTTGAATTTGTCCGAATGG+TGG | - | chr1.3:68780012-68780031 | None:intergenic | 40.0% | |
| CTTTGACGGAAACCTCTTAA+GGG | - | chr1.3:68778480-68778499 | None:intergenic | 40.0% | |
| GACATCCTCATCTTATGACT+AGG | + | chr1.3:68779698-68779717 | MS.gene49146:intron | 40.0% | |
| GCAACTAAAAATTGAGGGCT+GGG | - | chr1.3:68778627-68778646 | None:intergenic | 40.0% | |
| GCAATTGCTCTTCTCTCATA+TGG | + | chr1.3:68779500-68779519 | MS.gene49146:CDS | 40.0% | |
| GCTAGTTGAGTAGTACTTGT+GGG | + | chr1.3:68780276-68780295 | MS.gene49146:intron | 40.0% | |
| GGTCCTAAAAAGAGTCCATA+TGG | - | chr1.3:68780040-68780059 | None:intergenic | 40.0% | |
| GGTGCTAATAACACATTGCT+TGG | + | chr1.3:68780418-68780437 | MS.gene49146:intron | 40.0% | |
| GTCTTGGAATTACGGTGTTT+GGG | + | chr1.3:68779721-68779740 | MS.gene49146:CDS | 40.0% | |
| GTTCATAAGAGATTCCCTGT+GGG | + | chr1.3:68779774-68779793 | MS.gene49146:CDS | 40.0% | |
| TAGACATTACAGCTGCAACT+AGG | - | chr1.3:68778689-68778708 | None:intergenic | 40.0% | |
| TAGATTCTCATGGCAAATGG+AGG | + | chr1.3:68778749-68778768 | MS.gene49146:CDS | 40.0% | |
| TATGAGAGAAGAGCAATTGC+AGG | - | chr1.3:68779500-68779519 | None:intergenic | 40.0% | |
| TCATCTTATGACTAGGGTCT+TGG | + | chr1.3:68779705-68779724 | MS.gene49146:intron | 40.0% | |
| TCCATCATGGACAAACATGT+AGG | - | chr1.3:68779751-68779770 | None:intergenic | 40.0% | |
| TGACTAGGGTCTTGGAATTA+CGG | + | chr1.3:68779713-68779732 | MS.gene49146:intron | 40.0% | |
| TGCAACTAAAAATTGAGGGC+TGG | - | chr1.3:68778628-68778647 | None:intergenic | 40.0% | |
| TTTGACGGAAACCTCTTAAG+GGG | - | chr1.3:68778479-68778498 | None:intergenic | 40.0% | |
| ! | GTATGGAATATTGGGCTAGA+TGG | + | chr1.3:68779141-68779160 | MS.gene49146:CDS | 40.0% |
| ! | GTGCCATATGGACTCTTTTT+AGG | + | chr1.3:68780034-68780053 | MS.gene49146:CDS | 40.0% |
| ! | GTTCCTTGGTCTGAAATGTT+TGG | + | chr1.3:68779000-68779019 | MS.gene49146:CDS | 40.0% |
| !! | AAATTCAAAGGGGTGCCATA+TGG | + | chr1.3:68780022-68780041 | MS.gene49146:CDS | 40.0% |
| !! | ACAGTGTTGGGGTTGTTTTA+AGG | - | chr1.3:68778449-68778468 | None:intergenic | 40.0% |
| !! | ATTGTAGGGCTTTAAGGTTG+TGG | - | chr1.3:68778397-68778416 | None:intergenic | 40.0% |
| !! | CATGTTTGTCCATGATGGAT+TGG | + | chr1.3:68779752-68779771 | MS.gene49146:CDS | 40.0% |
| !! | TAGCTTTGGTGTTACCTCTA+TGG | + | chr1.3:68778707-68778726 | MS.gene49146:CDS | 40.0% |
| !!! | CAGTGTTGGGGTTGTTTTAA+GGG | - | chr1.3:68778448-68778467 | None:intergenic | 40.0% |
| !!! | TGGACTCTTTTTAGGACCAA+AGG | + | chr1.3:68780042-68780061 | MS.gene49146:CDS | 40.0% |
| !!! | TTGGGGTTGTTTTAAGGGAA+GGG | - | chr1.3:68778443-68778462 | None:intergenic | 40.0% |
| AGCAGCAACTCTTGTGAAGT+AGG | - | chr1.3:68779817-68779836 | None:intergenic | 45.0% | |
| AGGAAGTTGAAGAAGTGGGA+GGG | + | chr1.3:68780455-68780474 | MS.gene49146:intron | 45.0% | |
| AGTGTGCTCGTAGCCAAATT+TGG | + | chr1.3:68780383-68780402 | MS.gene49146:intron | 45.0% | |
| ATGTGAATGTGGCTGACCTT+TGG | - | chr1.3:68780061-68780080 | None:intergenic | 45.0% | |
| CACATTGCTTGGCTGACATA+TGG | + | chr1.3:68780429-68780448 | MS.gene49146:intron | 45.0% | |
| CCCCTTTGAATTTGTCCGAA+TGG | - | chr1.3:68780015-68780034 | None:intergenic | 45.0% | |
| CGCTAGTTGAGTAGTACTTG+TGG | + | chr1.3:68780275-68780294 | MS.gene49146:intron | 45.0% | |
| CTTCGCCGTTTGTGTTCTAA+TGG | + | chr1.3:68778539-68778558 | MS.gene49146:CDS | 45.0% | |
| GAGGAGATTGTAGGGCTTTA+AGG | - | chr1.3:68778403-68778422 | None:intergenic | 45.0% | |
| GCAGCAACTCTTGTGAAGTA+GGG | - | chr1.3:68779816-68779835 | None:intergenic | 45.0% | |
| GCCTACATGTTTGTCCATGA+TGG | + | chr1.3:68779747-68779766 | MS.gene49146:CDS | 45.0% | |
| GCTTTGACGGAAACCTCTTA+AGG | - | chr1.3:68778481-68778500 | None:intergenic | 45.0% | |
| GGTCTTGGAATTACGGTGTT+TGG | + | chr1.3:68779720-68779739 | MS.gene49146:CDS | 45.0% | |
| GGTTCATAAGAGATTCCCTG+TGG | + | chr1.3:68779773-68779792 | MS.gene49146:CDS | 45.0% | |
| GTGCAGGAAGTTGAAGAAGT+GGG | + | chr1.3:68780451-68780470 | MS.gene49146:intron | 45.0% | |
| GTGCCAAACATTTCAGACCA+AGG | - | chr1.3:68779006-68779025 | None:intergenic | 45.0% | |
| TCACATCATCGACCAAGAGA+GGG | + | chr1.3:68779431-68779450 | MS.gene49146:CDS | 45.0% | |
| TGGGAAGACTGGTGAAGAAT+CGG | - | chr1.3:68779220-68779239 | None:intergenic | 45.0% | |
| TTGACGGAAACCTCTTAAGG+GGG | - | chr1.3:68778478-68778497 | None:intergenic | 45.0% | |
| TTGTTTGCAGCTCCACCATT+CGG | + | chr1.3:68779997-68780016 | MS.gene49146:intron | 45.0% | |
| ! | GCAGCTGTAATGTCTAGCTT+TGG | + | chr1.3:68778693-68778712 | MS.gene49146:CDS | 45.0% |
| ! | TTTAACAAGGGATTGGTGCC+TGG | + | chr1.3:68779527-68779546 | MS.gene49146:CDS | 45.0% |
| !! | GGGATCTAATTTGGTGCCTT+TGG | + | chr1.3:68779965-68779984 | MS.gene49146:intron | 45.0% |
| !! | TGTATGATAGGGTAGTGGAG+AGG | + | chr1.3:68778978-68778997 | MS.gene49146:intron | 45.0% |
| !!! | GTTGGGGTTGTTTTAAGGGA+AGG | - | chr1.3:68778444-68778463 | None:intergenic | 45.0% |
| !!! | TGGGGTTGTTTTAAGGGAAG+GGG | - | chr1.3:68778442-68778461 | None:intergenic | 45.0% |
| AAGGGAAGGGGAAGAAGTTG+AGG | - | chr1.3:68778430-68778449 | None:intergenic | 50.0% | |
| AAGGGGAAGAAGTTGAGGGT+TGG | - | chr1.3:68778425-68778444 | None:intergenic | 50.0% | |
| AAGGGGGTGAAGAACAGTGT+TGG | - | chr1.3:68778462-68778481 | None:intergenic | 50.0% | |
| AAGTAGGGCACGTTGGCAAT+GGG | - | chr1.3:68779801-68779820 | None:intergenic | 50.0% | |
| AGCTCAAATGGTCCCTCTCT+TGG | - | chr1.3:68779446-68779465 | None:intergenic | 50.0% | |
| AGGGAAGGGGAAGAAGTTGA+GGG | - | chr1.3:68778429-68778448 | None:intergenic | 50.0% | |
| AGGGGGTGAAGAACAGTGTT+GGG | - | chr1.3:68778461-68778480 | None:intergenic | 50.0% | |
| CAGGAAGTTGAAGAAGTGGG+AGG | + | chr1.3:68780454-68780473 | MS.gene49146:intron | 50.0% | |
| CTGTTCTTCACCCCCTTAAG+AGG | + | chr1.3:68778465-68778484 | MS.gene49146:CDS | 50.0% | |
| GAGGGTTGGAGGAGATTGTA+GGG | - | chr1.3:68778411-68778430 | None:intergenic | 50.0% | |
| GGTGCAGGAAGTTGAAGAAG+TGG | + | chr1.3:68780450-68780469 | MS.gene49146:intron | 50.0% | |
| GTCACATCATCGACCAAGAG+AGG | + | chr1.3:68779430-68779449 | MS.gene49146:intron | 50.0% | |
| TACAGCAGCACCAACTGAGA+GGG | - | chr1.3:68779034-68779053 | None:intergenic | 50.0% | |
| TCTTGTGAAGTAGGGCACGT+TGG | - | chr1.3:68779808-68779827 | None:intergenic | 50.0% | |
| TGAGGGCTGGGTTTACTGTT+AGG | - | chr1.3:68778615-68778634 | None:intergenic | 50.0% | |
| TGAGGGTTGGAGGAGATTGT+AGG | - | chr1.3:68778412-68778431 | None:intergenic | 50.0% | |
| TTACAGCAGCACCAACTGAG+AGG | - | chr1.3:68779035-68779054 | None:intergenic | 50.0% | |
| TTCTATGGCATGCTTCCCTG+TGG | + | chr1.3:68779174-68779193 | MS.gene49146:CDS | 50.0% | |
| ! | GATGGGCTCATGAGGTTCTA+TGG | + | chr1.3:68779159-68779178 | MS.gene49146:CDS | 50.0% |
| !! | GTAGGGCTTTAAGGTTGTGG+CGG | - | chr1.3:68778394-68778413 | None:intergenic | 50.0% |
| ACTGCACCAAAGCAGAGACC+AGG | - | chr1.3:68779548-68779567 | None:intergenic | 55.0% | |
| AGACCTCATGCATGTGCCAC+AGG | - | chr1.3:68779193-68779212 | None:intergenic | 55.0% | |
| GAAGTAGGGCACGTTGGCAA+TGG | - | chr1.3:68779802-68779821 | None:intergenic | 55.0% | |
| GACCTCATGCATGTGCCACA+GGG | - | chr1.3:68779192-68779211 | None:intergenic | 55.0% | |
| GCTTGGCTGACATATGGTGC+AGG | + | chr1.3:68780435-68780454 | MS.gene49146:intron | 55.0% | |
| GGCACATTTGCCCTCTCAGT+TGG | + | chr1.3:68779021-68779040 | MS.gene49146:CDS | 55.0% | |
| GGGAAGAAGTTGAGGGTTGG+AGG | - | chr1.3:68778422-68778441 | None:intergenic | 55.0% | |
| GGGCTGGGTTTACTGTTAGG+AGG | - | chr1.3:68778612-68778631 | None:intergenic | 55.0% | |
| GGGGGTGAAGAACAGTGTTG+GGG | - | chr1.3:68778460-68778479 | None:intergenic | 55.0% | |
| TTCCCTGTGGCACATGCATG+AGG | + | chr1.3:68779187-68779206 | MS.gene49146:CDS | 55.0% | |
| ! | TTGGGCTAGATGGGCTCATG+AGG | + | chr1.3:68779151-68779170 | MS.gene49146:CDS | 55.0% |
| ! | TTGGTGCCTGGTCTCTGCTT+TGG | + | chr1.3:68779539-68779558 | MS.gene49146:CDS | 55.0% |
| !! | AGGGTAGTGGAGAGGTTCCT+TGG | + | chr1.3:68778986-68779005 | MS.gene49146:intron | 55.0% |
| ACGTTGGCAATGGGACCCAC+AGG | - | chr1.3:68779792-68779811 | None:intergenic | 60.0% | |
| CGTTGGCAATGGGACCCACA+GGG | - | chr1.3:68779791-68779810 | None:intergenic | 60.0% | |
| !! | GGGCTTTAAGGTTGTGGCGG+TGG | - | chr1.3:68778391-68778410 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 68778372 | 68780534 | 68778372 | ID=MS.gene49146 |
| chr1.3 | mRNA | 68778372 | 68780534 | 68778372 | ID=MS.gene49146.t1;Parent=MS.gene49146 |
| chr1.3 | exon | 68778372 | 68778770 | 68778372 | ID=MS.gene49146.t1.exon1;Parent=MS.gene49146.t1 |
| chr1.3 | CDS | 68778372 | 68778770 | 68778372 | ID=cds.MS.gene49146.t1;Parent=MS.gene49146.t1 |
| chr1.3 | exon | 68778988 | 68779050 | 68778988 | ID=MS.gene49146.t1.exon2;Parent=MS.gene49146.t1 |
| chr1.3 | CDS | 68778988 | 68779050 | 68778988 | ID=cds.MS.gene49146.t1;Parent=MS.gene49146.t1 |
| chr1.3 | exon | 68779137 | 68779208 | 68779137 | ID=MS.gene49146.t1.exon3;Parent=MS.gene49146.t1 |
| chr1.3 | CDS | 68779137 | 68779208 | 68779137 | ID=cds.MS.gene49146.t1;Parent=MS.gene49146.t1 |
| chr1.3 | exon | 68779431 | 68779565 | 68779431 | ID=MS.gene49146.t1.exon4;Parent=MS.gene49146.t1 |
| chr1.3 | CDS | 68779431 | 68779565 | 68779431 | ID=cds.MS.gene49146.t1;Parent=MS.gene49146.t1 |
| chr1.3 | exon | 68779720 | 68779845 | 68779720 | ID=MS.gene49146.t1.exon5;Parent=MS.gene49146.t1 |
| chr1.3 | CDS | 68779720 | 68779845 | 68779720 | ID=cds.MS.gene49146.t1;Parent=MS.gene49146.t1 |
| chr1.3 | exon | 68780007 | 68780063 | 68780007 | ID=MS.gene49146.t1.exon6;Parent=MS.gene49146.t1 |
| chr1.3 | CDS | 68780007 | 68780063 | 68780007 | ID=cds.MS.gene49146.t1;Parent=MS.gene49146.t1 |
| chr1.3 | exon | 68780457 | 68780534 | 68780457 | ID=MS.gene49146.t1.exon7;Parent=MS.gene49146.t1 |
| chr1.3 | CDS | 68780457 | 68780534 | 68780457 | ID=cds.MS.gene49146.t1;Parent=MS.gene49146.t1 |
| Gene Sequence |
| Protein sequence |
