AlfalfaGEDB | MS.gene50658

M. sativa cultivar XinJiangDaYe / MS.gene50658

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene50658.t1	AES89329.1	92.9	85	6	0	1	85	1	85	4.90E-37	163.3

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene50658.t1	P33080	70.0	90	22	1	1	85	1	90	4.5e-31	134.8

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene50658.t1	G7JL54	92.9	85	6	0	1	85	1	85	3.5e-37	163.3

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene50658	MS.gene002380	PPI
MS.gene045361	MS.gene50658	PPI
MS.gene50675	MS.gene50658	PPI
MS.gene003591	MS.gene50658	PPI
MS.gene062979	MS.gene50658	PPI
MS.gene40325	MS.gene50658	PPI
MS.gene79885	MS.gene50658	PPI
MS.gene01358	MS.gene50658	PPI
MS.gene014668	MS.gene50658	PPI
MS.gene75675	MS.gene50658	PPI
MS.gene003583	MS.gene50658	PPI
MS.gene50658	MS.gene75315	PPI
MS.gene79888	MS.gene50658	PPI
MS.gene40326	MS.gene50658	PPI
MS.gene062952	MS.gene50658	PPI
MS.gene77527	MS.gene50658	PPI
MS.gene031199	MS.gene50658	PPI
MS.gene50658	MS.gene057808	PPI
MS.gene50676	MS.gene50658	PPI
MS.gene003614	MS.gene50658	PPI
MS.gene057797	MS.gene50658	PPI
MS.gene23370	MS.gene50658	PPI
MS.gene77529	MS.gene50658	PPI
MS.gene014667	MS.gene50658	PPI
MS.gene68760	MS.gene50658	PPI
MS.gene003594	MS.gene50658	PPI
MS.gene003596	MS.gene50658	PPI
MS.gene50665	MS.gene50658	PPI
MS.gene79889	MS.gene50658	PPI
MS.gene50677	MS.gene50658	PPI
MS.gene68759	MS.gene50658	PPI
MS.gene003586	MS.gene50658	PPI
MS.gene057778	MS.gene50658	PPI
MS.gene062988	MS.gene50658	PPI
MS.gene75673	MS.gene50658	PPI
MS.gene045366	MS.gene50658	PPI
MS.gene77528	MS.gene50658	PPI
MS.gene68164	MS.gene50658	PPI
MS.gene50763	MS.gene50658	PPI
MS.gene031198	MS.gene50658	PPI
MS.gene031200	MS.gene50658	PPI
MS.gene045365	MS.gene50658	PPI
MS.gene045364	MS.gene50658	PPI
MS.gene50658	MS.gene68163	PPI
MS.gene23372	MS.gene50658	PPI
MS.gene50659	MS.gene50658	PPI
MS.gene75316	MS.gene50658	PPI
MS.gene057790	MS.gene50658	PPI
MS.gene045363	MS.gene50658	PPI
MS.gene003624	MS.gene50658	PPI
MS.gene23371	MS.gene50658	PPI
MS.gene031201	MS.gene50658	PPI
MS.gene75314	MS.gene50658	PPI
MS.gene50658	MS.gene75678	PPI
MS.gene68761	MS.gene50658	PPI
MS.gene75676	MS.gene50658	PPI
MS.gene062951	MS.gene50658	PPI
MS.gene045362	MS.gene50658	PPI
MS.gene77523	MS.gene50658	PPI
MS.gene50658	MS.gene50764	PPI
MS.gene75674	MS.gene50658	PPI
MS.gene50658	MS.gene014671	PPI
MS.gene79890	MS.gene50658	PPI
MS.gene003615	MS.gene50658	PPI
MS.gene79887	MS.gene50658	PPI
MS.gene062973	MS.gene50658	PPI
MS.gene003602	MS.gene50658	PPI
MS.gene50658	MS.gene75672	PPI
MS.gene047517	MS.gene50658	PPI
MS.gene50658	MS.gene062974	PPI
MS.gene003627	MS.gene50658	PPI
MS.gene003577	MS.gene50658	PPI
MS.gene77524	MS.gene50658	PPI
MS.gene50658	MS.gene014670	PPI
MS.gene062984	MS.gene50658	PPI
MS.gene062963	MS.gene50658	PPI
MS.gene057801	MS.gene50658	PPI
MS.gene014223	MS.gene50658	PPI
MS.gene014222	MS.gene50658	PPI
MS.gene40327	MS.gene50658	PPI
MS.gene50658	MS.gene75679	PPI
MS.gene003587	MS.gene50658	PPI
MS.gene50658	MS.gene50684	PPI
MS.gene003590	MS.gene50658	PPI
MS.gene045368	MS.gene50658	PPI
MS.gene062943	MS.gene50658	PPI
MS.gene063112	MS.gene50658	PPI
MS.gene79891	MS.gene50658	PPI
MS.gene50658	MS.gene79886	PPI
MS.gene50658	MS.gene50765	PPI
MS.gene77526	MS.gene50658	PPI
MS.gene045360	MS.gene50658	PPI
MS.gene50654	MS.gene50658	PPI
MS.gene014669	MS.gene50658	PPI
MS.gene057818	MS.gene50658	PPI
MS.gene50652	MS.gene50658	PPI
MS.gene50766	MS.gene50658	PPI
MS.gene68162	MS.gene50658	PPI
MS.gene50658	MS.gene045367	PPI
MS.gene50687	MS.gene50658	PPI
MS.gene75677	MS.gene50658	PPI
MS.gene003625	MS.gene50658	PPI
MS.gene003608	MS.gene50658	PPI
MS.gene057795	MS.gene50658	PPI
MS.gene68165	MS.gene50658	PPI
MS.gene01764	MS.gene50658	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene50658.t1	MTR_4g072490	85.882	85	12	0	1	85	1	85	8.56e-54	162
MS.gene50658.t1	MTR_4g072740	88.235	85	10	0	1	85	1	85	4.30e-53	160
MS.gene50658.t1	MTR_4g072470	83.529	85	14	0	1	85	1	85	5.08e-49	150
MS.gene50658.t1	MTR_4g072370	80.682	88	14	1	1	85	1	88	1.18e-48	149
MS.gene50658.t1	MTR_4g072630	79.070	86	17	1	1	85	1	86	4.70e-48	147
MS.gene50658.t1	MTR_4g072465	79.070	86	17	1	1	85	1	86	7.45e-48	147
MS.gene50658.t1	MTR_4g072590	92.941	85	6	0	1	85	1	85	8.43e-48	147
MS.gene50658.t1	MTR_4g072580	78.824	85	18	0	1	85	1	85	3.34e-47	145
MS.gene50658.t1	MTR_3g084170	73.333	90	19	1	1	85	1	90	6.09e-47	144
MS.gene50658.t1	MTR_4g072330	76.136	88	18	1	1	85	1	88	2.19e-46	143
MS.gene50658.t1	MTR_3g084240	72.222	90	20	1	1	85	1	90	6.73e-46	142
MS.gene50658.t1	MTR_4g072830	78.161	87	16	1	1	84	1	87	4.01e-45	140
MS.gene50658.t1	MTR_4g072870	72.527	91	19	1	1	85	1	91	4.36e-45	140
MS.gene50658.t1	MTR_3g084150	71.111	90	21	1	1	85	1	90	5.19e-45	140
MS.gene50658.t1	MTR_4g072600	75.294	85	21	0	1	85	1	85	7.48e-45	139
MS.gene50658.t1	MTR_4g072610	76.471	85	19	1	1	85	1	84	1.11e-44	139
MS.gene50658.t1	MTR_8g461410	70.000	90	22	1	1	85	1	90	1.23e-44	139
MS.gene50658.t1	MTR_3g084220	70.000	90	22	1	1	85	1	90	1.75e-44	138
MS.gene50658.t1	MTR_3g110038	70.000	90	22	1	1	85	1	90	1.96e-44	138
MS.gene50658.t1	MTR_4g072540	80.233	86	16	1	1	85	1	86	2.99e-44	137
MS.gene50658.t1	MTR_3g084180	70.000	90	22	1	1	85	1	90	3.70e-44	137
MS.gene50658.t1	MTR_4g072650	76.471	85	19	1	1	85	1	84	5.85e-44	137
MS.gene50658.t1	MTR_4g050700	71.429	91	20	1	1	85	1	91	6.45e-44	137
MS.gene50658.t1	MTR_2g012410	71.429	91	20	1	1	85	1	91	6.45e-44	137
MS.gene50658.t1	MTR_4g072670	80.233	86	16	1	1	85	1	86	1.17e-43	136
MS.gene50658.t1	MTR_4g072720	79.070	86	17	1	1	85	1	86	1.23e-43	136
MS.gene50658.t1	MTR_4g072510	77.907	86	18	1	1	85	1	86	5.19e-43	134
MS.gene50658.t1	MTR_4g072880	69.231	91	22	1	1	85	1	91	6.60e-43	134
MS.gene50658.t1	MTR_4g072860	73.626	91	18	1	1	85	1	91	7.79e-43	134
MS.gene50658.t1	MTR_5g008350	83.784	74	12	0	1	74	1	74	8.72e-43	134
MS.gene50658.t1	MTR_3g110032	68.132	91	23	1	1	85	1	91	1.33e-42	134
MS.gene50658.t1	MTR_4g072310	70.330	91	21	1	1	85	1	91	2.04e-42	133
MS.gene50658.t1	MTR_3g084260	70.330	91	21	1	1	85	1	91	5.74e-42	132
MS.gene50658.t1	MTR_4g072250	72.527	91	18	2	1	85	1	90	5.95e-42	132
MS.gene50658.t1	MTR_4g072380	74.419	86	21	1	1	85	1	86	1.17e-41	131
MS.gene50658.t1	MTR_4g072820	75.581	86	19	2	1	85	1	85	2.01e-41	130
MS.gene50658.t1	MTR_3g110042	71.264	87	20	1	1	82	1	87	2.15e-41	130
MS.gene50658.t1	MTR_4g072480	66.667	90	25	1	1	85	1	90	3.52e-41	130
MS.gene50658.t1	MTR_4g072850	71.739	92	19	1	1	85	1	92	5.19e-41	130
MS.gene50658.t1	MTR_4g072620	65.556	90	26	1	1	85	1	90	9.04e-41	129
MS.gene50658.t1	MTR_4g072690	80.000	85	17	0	1	85	1	85	1.71e-40	128
MS.gene50658.t1	MTR_4g072270	65.934	91	25	1	1	85	1	91	2.44e-40	128
MS.gene50658.t1	MTR_4g072450	80.000	85	17	0	1	85	1	85	3.77e-40	127
MS.gene50658.t1	MTR_4g072240	64.835	91	26	1	1	85	1	91	5.92e-40	127
MS.gene50658.t1	MTR_4g072890	65.934	91	25	1	1	85	1	91	6.25e-40	127
MS.gene50658.t1	MTR_4g072500	68.132	91	22	2	1	85	1	90	7.51e-40	127
MS.gene50658.t1	MTR_4g072260	64.835	91	26	1	1	85	1	91	1.37e-39	126
MS.gene50658.t1	MTR_4g072220	65.934	91	25	1	1	85	1	91	1.63e-39	126
MS.gene50658.t1	MTR_4g072660	64.706	85	30	0	1	85	1	85	2.05e-39	125
MS.gene50658.t1	MTR_4g072680	64.444	90	27	1	1	85	1	90	3.37e-39	125
MS.gene50658.t1	MTR_4g072530	68.132	91	22	2	1	85	1	90	4.83e-39	125
MS.gene50658.t1	MTR_3g117630	69.512	82	25	0	4	85	9	90	5.06e-39	125
MS.gene50658.t1	MTR_4g072570	66.667	90	25	1	1	85	1	90	5.59e-39	124
MS.gene50658.t1	MTR_4g072730	63.333	90	28	1	1	85	1	90	5.71e-39	124
MS.gene50658.t1	MTR_3g084250	65.556	90	26	1	1	85	1	90	6.10e-39	124
MS.gene50658.t1	MTR_3g084190	67.778	90	24	1	1	85	1	90	7.19e-39	124
MS.gene50658.t1	MTR_8g461420	68.889	90	23	1	1	85	1	90	7.77e-39	124
MS.gene50658.t1	MTR_4g072230	68.132	91	21	2	1	85	1	89	9.92e-39	124
MS.gene50658.t1	MTR_4g072640	67.033	91	23	2	1	85	1	90	1.29e-38	124
MS.gene50658.t1	MTR_3g084210	67.778	90	24	1	1	85	1	90	1.73e-38	123
MS.gene50658.t1	MTR_3g084230	67.778	90	24	1	1	85	1	90	2.46e-38	123
MS.gene50658.t1	MTR_4g072300	62.637	91	28	1	1	85	1	91	2.88e-38	123
MS.gene50658.t1	MTR_3g084160	65.934	91	24	2	1	85	1	90	8.04e-38	122
MS.gene50658.t1	MTR_4g072460	62.222	90	29	1	1	85	1	90	1.02e-37	121
MS.gene50658.t1	MTR_5g008370	68.889	90	23	2	1	85	1	90	1.40e-36	120
MS.gene50658.t1	MTR_3g110045	68.182	88	23	1	3	85	62	149	1.57e-36	120
MS.gene50658.t1	MTR_4g072940	68.889	90	21	1	3	85	33	122	1.69e-36	119
MS.gene50658.t1	MTR_5g008360	67.949	78	25	0	8	85	4	81	1.96e-36	118
MS.gene50658.t1	MTR_3g084200	70.833	72	16	1	1	67	1	72	8.11e-34	112
MS.gene50658.t1	MTR_4g072560	54.639	97	31	2	1	84	1	97	1.19e-32	108
MS.gene50658.t1	MTR_4g072980	56.522	92	32	2	1	84	1	92	2.35e-32	108
MS.gene50658.t1	MTR_4g072770	62.353	85	27	2	1	85	1	80	5.69e-31	104
MS.gene50658.t1	MTR_4g072910	64.935	77	25	1	9	85	26	100	6.07e-31	104
MS.gene50658.t1	MTR_4g072550	66.197	71	24	0	15	85	31	101	1.35e-30	103
MS.gene50658.t1	MTR_3g117640	49.000	100	36	2	1	85	1	100	3.12e-29	100
MS.gene50658.t1	MTR_4g072290	56.471	85	29	1	1	85	1	77	1.43e-28	98.2
MS.gene50658.t1	MTR_4g072750	66.667	75	16	2	1	67	1	74	5.50e-27	94.4
MS.gene50658.t1	MTR_3g110035	62.500	64	24	0	22	85	73	136	3.18e-25	91.7
MS.gene50658.t1	MTR_4g072190	51.190	84	36	2	5	84	17	99	5.08e-24	87.4
MS.gene50658.t1	MTR_4g072280	57.333	75	26	1	1	69	1	75	7.64e-24	86.3
MS.gene50658.t1	MTR_3g113310	55.224	67	29	1	18	84	40	105	1.50e-23	86.3
MS.gene50658.t1	MTR_6g077850	53.731	67	31	0	19	85	33	99	1.81e-23	85.9
MS.gene50658.t1	MTR_3g117610	56.716	67	28	1	18	84	43	108	2.07e-23	86.3
MS.gene50658.t1	MTR_4g072930	52.500	80	33	2	11	85	31	110	8.05e-23	84.7
MS.gene50658.t1	MTR_4g072840	50.588	85	17	2	1	85	1	60	3.88e-22	81.3
MS.gene50658.t1	MTR_8g461400	46.667	90	17	2	1	85	1	64	6.54e-22	80.9
MS.gene50658.t1	MTR_5g021820	53.030	66	30	1	19	84	39	103	3.42e-20	77.8
MS.gene50658.t1	MTR_8g076040	53.030	66	30	1	19	84	40	104	1.95e-19	75.9
MS.gene50658.t1	MTR_2g043960	57.627	59	24	1	19	77	75	132	1.53e-18	75.1
MS.gene50658.t1	MTR_4g124750	55.932	59	25	1	19	77	68	125	5.16e-18	73.6
MS.gene50658.t1	MTR_4g005310	50.000	66	32	1	16	80	58	123	8.50e-17	70.5
MS.gene50658.t1	MTR_1g094750	50.000	62	30	1	19	80	49	109	4.90e-16	67.4
MS.gene50658.t1	MTR_1g009150	51.515	66	31	1	12	77	63	127	7.80e-16	68.6
MS.gene50658.t1	MTR_3g092220	40.000	85	48	2	3	85	16	99	8.30e-16	67.0
MS.gene50658.t1	MTR_7g118010	47.059	68	33	2	20	85	23	89	1.48e-15	65.9
MS.gene50658.t1	MTR_1g024085	45.455	77	39	2	11	85	26	101	1.66e-15	67.0
MS.gene50658.t1	MTR_4g025830	48.529	68	31	2	20	84	79	145	1.75e-15	67.0
MS.gene50658.t1	MTR_1g061570	49.315	73	34	2	10	80	7	78	2.37e-15	65.9
MS.gene50658.t1	MTR_0388s0020	41.558	77	41	2	11	84	66	141	3.04e-15	66.2
MS.gene50658.t1	MTR_4g005320	50.000	58	28	1	20	77	70	126	3.81e-15	66.2
MS.gene50658.t1	MTR_7g101740	50.769	65	31	1	19	83	39	102	4.38e-15	65.1
MS.gene50658.t1	MTR_3g105900	67.442	43	14	0	17	59	1169	1211	1.43e-14	67.4
MS.gene50658.t1	MTR_1g063950	48.387	62	31	1	19	80	47	107	3.18e-14	63.2
MS.gene50658.t1	MTR_4g072160	50.000	62	30	1	19	80	36	96	4.55e-14	63.2
MS.gene50658.t1	MTR_8g026730	44.118	68	35	2	20	85	27	93	8.83e-14	61.6
MS.gene50658.t1	MTR_3g109160	44.595	74	40	1	4	77	53	125	1.18e-13	62.8
MS.gene50658.t1	MTR_8g461210	45.455	66	35	1	19	84	34	98	3.94e-13	60.1
MS.gene50658.t1	MTR_3g098970	34.247	73	47	1	13	85	46	117	9.13e-12	57.4
MS.gene50658.t1	MTR_5g008380	71.875	32	9	0	54	85	246	277	1.07e-11	58.9
MS.gene50658.t1	MTR_8g101530	33.766	77	50	1	8	84	28	103	1.70e-11	56.6
MS.gene50658.t1	MTR_4g021810	49.153	59	28	2	20	77	26	83	4.56e-11	54.3
MS.gene50658.t1	MTR_7g405740	42.623	61	34	1	20	80	67	126	6.72e-11	55.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene50658.t1	AT4G38840	69.118	68	20	1	19	85	32	99	1.95e-32	108
MS.gene50658.t1	AT5G18050	62.025	79	28	2	8	85	13	90	2.09e-31	105
MS.gene50658.t1	AT5G18060	64.865	74	25	1	13	85	17	90	3.42e-31	105
MS.gene50658.t1	AT5G18020	63.158	76	26	2	8	82	13	87	9.32e-31	103
MS.gene50658.t1	AT4G38850	60.494	81	25	2	8	85	13	89	1.41e-30	103
MS.gene50658.t1	AT5G18080	60.759	79	29	2	8	85	13	90	1.66e-30	103
MS.gene50658.t1	AT4G38825	62.857	70	25	1	17	85	20	89	1.18e-29	101
MS.gene50658.t1	AT2G21200	61.111	72	27	1	14	84	15	86	1.25e-29	101
MS.gene50658.t1	AT4G34800	59.756	82	29	2	1	78	1	82	1.77e-29	100
MS.gene50658.t1	AT5G18030	58.228	79	29	2	8	85	13	88	2.32e-29	100
MS.gene50658.t1	AT5G18010	58.228	79	31	2	8	85	13	90	1.20e-28	98.6
MS.gene50658.t1	AT2G21210	55.263	76	32	1	12	85	20	95	1.70e-28	98.6
MS.gene50658.t1	AT4G34810	62.687	67	21	1	20	82	48	114	2.35e-28	99.0
MS.gene50658.t1	AT3G03820	58.442	77	29	1	12	85	19	95	8.39e-28	96.7
MS.gene50658.t1	AT2G21210	55.263	76	32	1	12	85	87	162	1.12e-27	98.6
MS.gene50658.t1	AT4G34770	54.545	88	29	2	9	85	15	102	1.90e-27	96.3
MS.gene50658.t1	AT4G13790	50.000	82	39	1	3	82	8	89	5.04e-27	94.7
MS.gene50658.t1	AT3G03840	57.895	76	30	1	12	85	19	94	5.79e-27	94.7
MS.gene50658.t1	AT3G03850	62.687	67	23	1	21	85	26	92	1.73e-26	93.2
MS.gene50658.t1	AT3G03830	54.545	77	32	1	12	85	16	92	2.04e-25	90.5
MS.gene50658.t1	AT4G34790	65.574	61	19	1	20	78	39	99	3.02e-24	88.2
MS.gene50658.t1	AT4G38860	48.352	91	37	1	5	85	15	105	3.42e-24	87.8
MS.gene50658.t1	AT4G34780	54.930	71	29	1	17	84	25	95	4.89e-23	85.1
MS.gene50658.t1	AT2G21220	50.000	90	34	3	5	84	15	103	1.44e-22	84.0
MS.gene50658.t1	AT1G75580	56.716	67	28	1	18	84	42	107	9.13e-22	82.0
MS.gene50658.t1	AT4G34760	45.652	92	37	2	5	84	16	106	2.43e-21	80.9
MS.gene50658.t1	AT2G16580	52.239	67	31	1	18	84	42	107	3.31e-20	77.8
MS.gene50658.t1	AT4G36110	46.512	86	37	2	5	82	17	101	5.92e-20	77.0
MS.gene50658.t1	AT2G18010	54.688	64	28	1	19	82	47	109	1.07e-19	76.6
MS.gene50658.t1	AT3G43120	55.932	59	25	1	19	77	78	135	4.63e-19	76.3
MS.gene50658.t1	AT1G19830	58.333	60	24	1	18	77	46	104	5.40e-19	75.1
MS.gene50658.t1	AT5G20810	57.627	59	24	1	19	77	78	135	3.19e-18	74.3
MS.gene50658.t1	AT5G20810	57.627	59	24	1	19	77	78	135	6.36e-18	74.3
MS.gene50658.t1	AT3G20220	53.226	62	27	2	20	80	47	107	6.48e-17	69.7
MS.gene50658.t1	AT5G66260	44.578	83	44	2	4	85	17	98	2.90e-16	67.8
MS.gene50658.t1	AT3G61900	42.169	83	44	2	6	85	16	97	4.00e-16	68.2
MS.gene50658.t1	AT2G46690	42.500	80	42	2	9	85	13	91	5.24e-16	67.4
MS.gene50658.t1	AT3G51200	43.529	85	39	4	4	83	26	106	1.01e-15	66.6
MS.gene50658.t1	AT2G37030	50.794	63	30	1	19	81	48	109	7.66e-15	64.7
MS.gene50658.t1	AT1G75590	45.455	66	35	1	19	84	41	105	9.89e-15	65.1
MS.gene50658.t1	AT4G34750	38.158	76	46	1	9	84	26	100	2.94e-14	63.9
MS.gene50658.t1	AT4G34750	38.158	76	46	1	9	84	26	100	2.94e-14	63.9
MS.gene50658.t1	AT1G19840	45.455	66	35	1	19	84	40	104	3.79e-14	63.5
MS.gene50658.t1	AT5G10990	43.284	67	37	1	19	85	40	105	4.58e-14	63.2
MS.gene50658.t1	AT4G12410	50.000	64	28	2	20	80	76	138	2.81e-13	61.2
MS.gene50658.t1	AT4G00880	41.176	85	45	3	3	85	13	94	6.44e-13	59.7
MS.gene50658.t1	AT4G22620	41.026	78	42	2	6	80	65	141	8.27e-13	60.1
MS.gene50658.t1	AT2G24400	49.180	61	30	1	17	77	61	120	8.60e-13	60.5
MS.gene50658.t1	AT4G31320	48.276	58	29	1	20	77	80	136	1.13e-12	60.5
MS.gene50658.t1	AT3G53250	41.667	72	38	1	10	81	42	109	1.45e-12	58.9
MS.gene50658.t1	AT3G53250	42.254	71	37	1	10	80	73	139	2.99e-12	58.5
MS.gene50658.t1	AT4G09530	40.580	69	38	2	20	85	28	96	9.11e-12	56.2
MS.gene50658.t1	AT5G53590	41.667	72	36	2	19	85	45	115	9.97e-12	57.0
MS.gene50658.t1	AT3G09870	45.312	64	32	2	12	73	37	99	3.46e-11	55.1
MS.gene50658.t1	AT3G12830	34.568	81	52	1	5	85	35	114	6.31e-11	54.7

Find 21 sgRNAs with CRISPR-Local

Find 22 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CAGCTTGGCTCAACAATTCT+TGG	0.248657	4.3:-33313398	None:intergenic
CTTTGGTTCAAGTATGATAT+AGG	0.307427	4.3:-33313369	None:intergenic
ACAATTCTTGGAATGAACTT+TGG	0.386355	4.3:-33313386	None:intergenic
TTTGGTTCAAGTATGATATA+GGG	0.394596	4.3:-33313368	None:intergenic
GTCTACCTAGCATCATCAAA+AGG	0.443431	4.3:+33313265	MS.gene50658:CDS
ATCCGAATTGTTCCTCAGCT+TGG	0.458954	4.3:-33313413	None:intergenic
AAGAAGTGACTTCTAAGAAA+AGG	0.476477	4.3:-33313479	None:intergenic
TACACTGCTAGATATCCCTT+TGG	0.489834	4.3:-33313315	None:intergenic
AGCCAAGCTGAGGAACAATT+CGG	0.523640	4.3:+33313411	MS.gene50658:CDS
TTCGGATATGACCATCCAAT+GGG	0.532735	4.3:+33313429	MS.gene50658:CDS
GGCATCATCTGCAAAAGTTG+TGG	0.550718	4.3:+33313287	MS.gene50658:CDS
TCTACCTAGCATCATCAAAA+GGG	0.553716	4.3:+33313266	MS.gene50658:CDS
TAGTGATACCGCCCATTGGA+TGG	0.559579	4.3:-33313440	None:intergenic
AAAAGTTGTGGACGTACCAA+AGG	0.561129	4.3:+33313299	MS.gene50658:CDS
GGAATAGTGATACCGCCCAT+TGG	0.574785	4.3:-33313444	None:intergenic
AAGAAAAGGTCTTCTCTGCA+AGG	0.585314	4.3:-33313465	None:intergenic
AAAGTTGTGGACGTACCAAA+GGG	0.587097	4.3:+33313300	MS.gene50658:CDS
ATTCGGATATGACCATCCAA+TGG	0.596434	4.3:+33313428	MS.gene50658:CDS
AGAATTGTTGAGCCAAGCTG+AGG	0.641874	4.3:+33313401	MS.gene50658:CDS
GGATATGACCATCCAATGGG+CGG	0.694114	4.3:+33313432	MS.gene50658:CDS
GGATATCTAGCAGTGTACGT+AGG	0.713792	4.3:+33313321	MS.gene50658:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTTGGTTCAAGTATGATATA+GGG	-	chr4.3:33313371-33313390	None:intergenic	25.0%
	ACAATTCTTGGAATGAACTT+TGG	-	chr4.3:33313389-33313408	None:intergenic	30.0%
!	AAGAAGTGACTTCTAAGAAA+AGG	-	chr4.3:33313482-33313501	None:intergenic	30.0%
!	CTTTGGTTCAAGTATGATAT+AGG	-	chr4.3:33313372-33313391	None:intergenic	30.0%
	TCTACCTAGCATCATCAAAA+GGG	+	chr4.3:33313266-33313285	MS.gene50658:CDS	35.0%
	AAAAGTTGTGGACGTACCAA+AGG	+	chr4.3:33313299-33313318	MS.gene50658:CDS	40.0%
	AAAGTTGTGGACGTACCAAA+GGG	+	chr4.3:33313300-33313319	MS.gene50658:CDS	40.0%
	AAGAAAAGGTCTTCTCTGCA+AGG	-	chr4.3:33313468-33313487	None:intergenic	40.0%
	ATTCGGATATGACCATCCAA+TGG	+	chr4.3:33313428-33313447	MS.gene50658:CDS	40.0%
	GTCTACCTAGCATCATCAAA+AGG	+	chr4.3:33313265-33313284	MS.gene50658:CDS	40.0%
	TACACTGCTAGATATCCCTT+TGG	-	chr4.3:33313318-33313337	None:intergenic	40.0%
	TTCGGATATGACCATCCAAT+GGG	+	chr4.3:33313429-33313448	MS.gene50658:CDS	40.0%
	AGAATTGTTGAGCCAAGCTG+AGG	+	chr4.3:33313401-33313420	MS.gene50658:CDS	45.0%
	AGCCAAGCTGAGGAACAATT+CGG	+	chr4.3:33313411-33313430	MS.gene50658:CDS	45.0%
	ATCCGAATTGTTCCTCAGCT+TGG	-	chr4.3:33313416-33313435	None:intergenic	45.0%
	CAGCTTGGCTCAACAATTCT+TGG	-	chr4.3:33313401-33313420	None:intergenic	45.0%
	GGATATCTAGCAGTGTACGT+AGG	+	chr4.3:33313321-33313340	MS.gene50658:CDS	45.0%
	GGCATCATCTGCAAAAGTTG+TGG	+	chr4.3:33313287-33313306	MS.gene50658:CDS	45.0%
!!!	GATGCCCTTTTGATGATGCT+AGG	-	chr4.3:33313273-33313292	None:intergenic	45.0%
	GGAATAGTGATACCGCCCAT+TGG	-	chr4.3:33313447-33313466	None:intergenic	50.0%
	GGATATGACCATCCAATGGG+CGG	+	chr4.3:33313432-33313451	MS.gene50658:CDS	50.0%
	TAGTGATACCGCCCATTGGA+TGG	-	chr4.3:33313443-33313462	None:intergenic	50.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.3	gene	33313255	33313512	33313255	ID=MS.gene50658
chr4.3	mRNA	33313255	33313512	33313255	ID=MS.gene50658.t1;Parent=MS.gene50658
chr4.3	exon	33313255	33313512	33313255	ID=MS.gene50658.t1.exon1;Parent=MS.gene50658.t1
chr4.3	CDS	33313255	33313512	33313255	ID=cds.MS.gene50658.t1;Parent=MS.gene50658.t1

Gene Sequence	>MS.gene50658 ATGGGTTTTCGTCTACCTAGCATCATCAAAAGGGCATCATCTGCAAAAGTTGTGGACGTACCAAAGGGATATCTAGCAGTGTACGTAGGAGAGAAAATGAAGCGATTTGTGATCCCTATATCATACTTGAACCAAAGTTCATTCCAAGAATTGTTGAGCCAAGCTGAGGAACAATTCGGATATGACCATCCAATGGGCGGTATCACTATTCCTTGCAGAGAAGACCTTTTCTTAGAAGTCACTTCTTACTTAAATTGA
Protein sequence	>MS.gene50658.t1 MGFRLPSIIKRASSAKVVDVPKGYLAVYVGEKMKRFVIPISYLNQSSFQELLSQAEEQFGYDHPMGGITIPCREDLFLEVTSYLN