AlfalfaGEDB | MS.gene50669

M. sativa cultivar XinJiangDaYe / MS.gene50669

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene50669.t1	AES89319.1	91.8	85	7	0	1	85	1	85	1.70E-37	164.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene50669.t1	P33079	68.1	91	23	1	1	85	1	91	3.8e-30	131.7

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene50669.t1	G7JL44	91.8	85	7	0	1	85	1	85	1.2e-37	164.9

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene50669	MS.gene062951	PPI
MS.gene50669	MS.gene057801	PPI
MS.gene50669	MS.gene77524	PPI
MS.gene50669	MS.gene057795	PPI
MS.gene50669	MS.gene68162	PPI
MS.gene062973	MS.gene50669	PPI
MS.gene003602	MS.gene50669	PPI
MS.gene047517	MS.gene50669	PPI
MS.gene50669	MS.gene75675	PPI
MS.gene50669	MS.gene79887	PPI
MS.gene003627	MS.gene50669	PPI
MS.gene062984	MS.gene50669	PPI
MS.gene50669	MS.gene68761	PPI
MS.gene40327	MS.gene50669	PPI
MS.gene50669	MS.gene40325	PPI
MS.gene50669	MS.gene68165	PPI
MS.gene50669	MS.gene50684	PPI
MS.gene50669	MS.gene057797	PPI
MS.gene50669	MS.gene003614	PPI
MS.gene50669	MS.gene014668	PPI
MS.gene50669	MS.gene79886	PPI
MS.gene003591	MS.gene50669	PPI
MS.gene50669	MS.gene50765	PPI
MS.gene003587	MS.gene50669	PPI
MS.gene062979	MS.gene50669	PPI
MS.gene003590	MS.gene50669	PPI
MS.gene062943	MS.gene50669	PPI
MS.gene063112	MS.gene50669	PPI
MS.gene003608	MS.gene50669	PPI
MS.gene50669	MS.gene003583	PPI
MS.gene50669	MS.gene77527	PPI
MS.gene50669	MS.gene79891	PPI
MS.gene50669	MS.gene045367	PPI
MS.gene50669	MS.gene045364	PPI
MS.gene77526	MS.gene50669	PPI
MS.gene50669	MS.gene045363	PPI
MS.gene045360	MS.gene50669	PPI
MS.gene50676	MS.gene50669	PPI
MS.gene50766	MS.gene50669	PPI
MS.gene50669	MS.gene50652	PPI
MS.gene50669	MS.gene014669	PPI
MS.gene50669	MS.gene057808	PPI
MS.gene50669	MS.gene002380	PPI
MS.gene75677	MS.gene50669	PPI
MS.gene031201	MS.gene50669	PPI
MS.gene50677	MS.gene50669	PPI
MS.gene003625	MS.gene50669	PPI
MS.gene045361	MS.gene50669	PPI
MS.gene50669	MS.gene68163	PPI
MS.gene50675	MS.gene50669	PPI
MS.gene50669	MS.gene75315	PPI
MS.gene50669	MS.gene057818	PPI
MS.gene50669	MS.gene68164	PPI
MS.gene50669	MS.gene68759	PPI
MS.gene50669	MS.gene79889	PPI
MS.gene01358	MS.gene50669	PPI
MS.gene50669	MS.gene031200	PPI
MS.gene50669	MS.gene014222	PPI
MS.gene50669	MS.gene79888	PPI
MS.gene50669	MS.gene75676	PPI
MS.gene057790	MS.gene50669	PPI
MS.gene40326	MS.gene50669	PPI
MS.gene50669	MS.gene031199	PPI
MS.gene062952	MS.gene50669	PPI
MS.gene50669	MS.gene50687	PPI
MS.gene50669	MS.gene014223	PPI
MS.gene50669	MS.gene79885	PPI
MS.gene23370	MS.gene50669	PPI
MS.gene77529	MS.gene50669	PPI
MS.gene014667	MS.gene50669	PPI
MS.gene003594	MS.gene50669	PPI
MS.gene50665	MS.gene50669	PPI
MS.gene003586	MS.gene50669	PPI
MS.gene057778	MS.gene50669	PPI
MS.gene062988	MS.gene50669	PPI
MS.gene75673	MS.gene50669	PPI
MS.gene045366	MS.gene50669	PPI
MS.gene062963	MS.gene50669	PPI
MS.gene50763	MS.gene50669	PPI
MS.gene045365	MS.gene50669	PPI
MS.gene50669	MS.gene045368	PPI
MS.gene23372	MS.gene50669	PPI
MS.gene50659	MS.gene50669	PPI
MS.gene75316	MS.gene50669	PPI
MS.gene50669	MS.gene75678	PPI
MS.gene50669	MS.gene75314	PPI
MS.gene50669	MS.gene01764	PPI
MS.gene50669	MS.gene75679	PPI
MS.gene003624	MS.gene50669	PPI
MS.gene50669	MS.gene68760	PPI
MS.gene50669	MS.gene031198	PPI
MS.gene50669	MS.gene50764	PPI
MS.gene045362	MS.gene50669	PPI
MS.gene50669	MS.gene77528	PPI
MS.gene77523	MS.gene50669	PPI
MS.gene50669	MS.gene014671	PPI
MS.gene50669	MS.gene003596	PPI
MS.gene50669	MS.gene003577	PPI
MS.gene50669	MS.gene23371	PPI
MS.gene50669	MS.gene75672	PPI
MS.gene50669	MS.gene50654	PPI
MS.gene50669	MS.gene062974	PPI
MS.gene75674	MS.gene50669	PPI
MS.gene79890	MS.gene50669	PPI
MS.gene50669	MS.gene014670	PPI
MS.gene003615	MS.gene50669	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene50669.t1	MTR_4g072490	91.765	85	7	0	1	85	1	85	7.87e-56	167
MS.gene50669.t1	MTR_4g072740	90.588	85	8	0	1	85	1	85	7.34e-54	162
MS.gene50669.t1	MTR_4g072465	86.047	86	11	1	1	85	1	86	1.11e-50	154
MS.gene50669.t1	MTR_4g072470	87.059	85	11	0	1	85	1	85	1.46e-50	154
MS.gene50669.t1	MTR_4g072630	84.884	86	12	1	1	85	1	86	2.17e-50	153
MS.gene50669.t1	MTR_4g072580	83.529	85	14	0	1	85	1	85	1.65e-49	151
MS.gene50669.t1	MTR_4g072370	80.682	88	14	1	1	85	1	88	1.55e-47	146
MS.gene50669.t1	MTR_4g072670	88.372	86	9	1	1	85	1	86	2.69e-47	145
MS.gene50669.t1	MTR_4g072600	80.000	85	17	0	1	85	1	85	4.85e-47	145
MS.gene50669.t1	MTR_4g072830	81.609	87	13	1	1	84	1	87	9.29e-47	144
MS.gene50669.t1	MTR_4g072720	84.884	86	12	1	1	85	1	86	2.32e-45	140
MS.gene50669.t1	MTR_4g072540	83.721	86	13	1	1	85	1	86	4.34e-45	140
MS.gene50669.t1	MTR_4g072330	76.136	88	18	1	1	85	1	88	4.94e-45	140
MS.gene50669.t1	MTR_4g072510	82.558	86	14	1	1	85	1	86	2.08e-44	138
MS.gene50669.t1	MTR_3g084170	73.333	90	19	1	1	85	1	90	2.16e-44	138
MS.gene50669.t1	MTR_4g072610	78.824	85	17	1	1	85	1	84	2.25e-44	138
MS.gene50669.t1	MTR_5g008350	86.486	74	10	0	1	74	1	74	2.60e-44	137
MS.gene50669.t1	MTR_4g072590	85.882	85	12	0	1	85	1	85	6.84e-44	137
MS.gene50669.t1	MTR_4g072450	88.235	85	10	0	1	85	1	85	7.31e-44	137
MS.gene50669.t1	MTR_4g072690	87.059	85	11	0	1	85	1	85	7.81e-44	137
MS.gene50669.t1	MTR_3g084150	72.527	91	18	2	1	85	1	90	9.19e-44	137
MS.gene50669.t1	MTR_4g050700	72.527	91	19	1	1	85	1	91	1.33e-43	136
MS.gene50669.t1	MTR_2g012410	72.527	91	19	1	1	85	1	91	1.33e-43	136
MS.gene50669.t1	MTR_8g461410	71.429	91	19	2	1	85	1	90	2.75e-43	135
MS.gene50669.t1	MTR_3g084240	72.222	90	20	1	1	85	1	90	2.94e-43	135
MS.gene50669.t1	MTR_3g084220	71.111	90	21	1	1	85	1	90	5.56e-43	135
MS.gene50669.t1	MTR_3g110032	71.429	91	20	1	1	85	1	91	7.70e-43	134
MS.gene50669.t1	MTR_3g084180	71.429	91	19	2	1	85	1	90	9.62e-43	134
MS.gene50669.t1	MTR_4g072650	76.471	85	19	1	1	85	1	84	1.07e-42	134
MS.gene50669.t1	MTR_3g110038	70.000	90	22	1	1	85	1	90	1.61e-42	133
MS.gene50669.t1	MTR_4g072870	69.231	91	22	1	1	85	1	91	5.84e-42	132
MS.gene50669.t1	MTR_4g072380	75.581	86	20	1	1	85	1	86	6.61e-42	132
MS.gene50669.t1	MTR_3g110042	74.444	90	16	2	1	84	1	89	1.73e-41	131
MS.gene50669.t1	MTR_4g072860	73.626	91	18	1	1	85	1	91	2.69e-41	130
MS.gene50669.t1	MTR_4g072880	68.132	91	23	1	1	85	1	91	4.77e-41	130
MS.gene50669.t1	MTR_4g072250	73.626	91	17	2	1	85	1	90	7.02e-41	129
MS.gene50669.t1	MTR_4g072310	69.231	91	22	1	1	85	1	91	9.41e-41	129
MS.gene50669.t1	MTR_3g084260	69.231	91	22	1	1	85	1	91	3.96e-40	127
MS.gene50669.t1	MTR_4g072480	67.778	90	24	1	1	85	1	90	4.63e-40	127
MS.gene50669.t1	MTR_4g072850	71.739	92	19	1	1	85	1	92	5.31e-40	127
MS.gene50669.t1	MTR_4g072820	74.419	86	20	2	1	85	1	85	9.77e-40	126
MS.gene50669.t1	MTR_4g072620	66.667	90	25	1	1	85	1	90	2.18e-39	125
MS.gene50669.t1	MTR_4g072270	65.934	91	25	1	1	85	1	91	8.93e-39	124
MS.gene50669.t1	MTR_4g072680	66.667	90	25	1	1	85	1	90	9.16e-39	124
MS.gene50669.t1	MTR_4g072240	63.736	91	27	1	1	85	1	91	1.03e-38	124
MS.gene50669.t1	MTR_3g117630	70.455	88	20	1	4	85	3	90	2.48e-38	123
MS.gene50669.t1	MTR_4g072570	68.889	90	23	1	1	85	1	90	2.68e-38	123
MS.gene50669.t1	MTR_4g072660	65.882	85	29	0	1	85	1	85	3.56e-38	122
MS.gene50669.t1	MTR_4g072220	63.736	91	27	1	1	85	1	91	5.16e-38	122
MS.gene50669.t1	MTR_4g072890	62.637	91	28	1	1	85	1	91	7.23e-38	122
MS.gene50669.t1	MTR_4g072730	64.444	90	27	1	1	85	1	90	9.27e-38	121
MS.gene50669.t1	MTR_4g072500	67.033	91	23	2	1	85	1	90	1.21e-37	121
MS.gene50669.t1	MTR_3g084250	65.556	90	26	1	1	85	1	90	1.64e-37	121
MS.gene50669.t1	MTR_4g072460	64.444	90	27	1	1	85	1	90	3.69e-37	120
MS.gene50669.t1	MTR_4g072230	68.132	91	21	2	1	85	1	89	3.75e-37	120
MS.gene50669.t1	MTR_4g072260	61.538	91	29	1	1	85	1	91	3.93e-37	120
MS.gene50669.t1	MTR_4g072300	61.538	91	29	1	1	85	1	91	4.00e-37	120
MS.gene50669.t1	MTR_4g072640	67.033	91	23	2	1	85	1	90	5.13e-37	119
MS.gene50669.t1	MTR_4g072530	65.934	91	24	2	1	85	1	90	5.96e-37	119
MS.gene50669.t1	MTR_5g008360	70.513	78	23	0	8	85	4	81	2.16e-36	118
MS.gene50669.t1	MTR_3g084210	65.556	90	26	1	1	85	1	90	2.25e-36	118
MS.gene50669.t1	MTR_8g461420	65.556	90	26	1	1	85	1	90	4.12e-36	117
MS.gene50669.t1	MTR_3g084190	64.444	90	27	1	1	85	1	90	5.48e-36	117
MS.gene50669.t1	MTR_3g084230	64.444	90	27	1	1	85	1	90	2.02e-35	115
MS.gene50669.t1	MTR_3g084160	64.835	91	25	2	1	85	1	90	8.88e-35	114
MS.gene50669.t1	MTR_4g072940	67.778	90	22	1	3	85	33	122	1.08e-34	115
MS.gene50669.t1	MTR_5g008370	67.778	90	24	2	1	85	1	90	2.37e-34	114
MS.gene50669.t1	MTR_3g110045	65.909	88	25	1	3	85	62	149	1.02e-33	113
MS.gene50669.t1	MTR_4g072980	56.522	92	32	2	1	84	1	92	4.11e-32	107
MS.gene50669.t1	MTR_3g084200	68.056	72	18	1	1	67	1	72	1.56e-31	106
MS.gene50669.t1	MTR_4g072560	52.577	97	33	2	1	84	1	97	8.79e-31	104
MS.gene50669.t1	MTR_4g072770	72.727	66	18	0	20	85	15	80	2.08e-30	102
MS.gene50669.t1	MTR_4g072910	65.278	72	25	0	14	85	29	100	3.31e-30	102
MS.gene50669.t1	MTR_3g117640	49.000	100	36	2	1	85	1	100	1.17e-28	99.0
MS.gene50669.t1	MTR_4g072550	63.380	71	26	0	15	85	31	101	2.30e-28	98.2
MS.gene50669.t1	MTR_4g072290	56.471	85	29	1	1	85	1	77	6.83e-26	91.3
MS.gene50669.t1	MTR_3g110035	62.500	64	24	0	22	85	73	136	1.76e-24	89.7
MS.gene50669.t1	MTR_4g072750	75.926	54	13	0	13	66	20	73	2.32e-24	87.8
MS.gene50669.t1	MTR_6g077850	55.224	67	30	0	19	85	33	99	9.63e-23	84.0
MS.gene50669.t1	MTR_4g072190	52.439	82	34	2	5	82	17	97	1.09e-22	84.0
MS.gene50669.t1	MTR_4g072280	54.667	75	28	1	1	69	1	75	1.66e-22	82.8
MS.gene50669.t1	MTR_3g117610	58.462	65	26	1	18	82	43	106	3.27e-22	83.2
MS.gene50669.t1	MTR_3g113310	53.731	67	30	1	18	84	40	105	1.64e-21	81.3
MS.gene50669.t1	MTR_4g072930	48.750	80	36	2	11	85	31	110	1.63e-20	78.6
MS.gene50669.t1	MTR_4g072840	51.163	86	15	3	1	85	1	60	1.52e-19	74.7
MS.gene50669.t1	MTR_8g461400	46.667	90	17	2	1	85	1	64	2.92e-19	74.3
MS.gene50669.t1	MTR_5g021820	53.030	66	30	1	19	84	39	103	6.58e-19	74.3
MS.gene50669.t1	MTR_8g076040	54.688	64	28	1	19	82	40	102	1.60e-18	73.6
MS.gene50669.t1	MTR_2g043960	57.627	59	24	1	19	77	75	132	8.48e-18	73.2
MS.gene50669.t1	MTR_4g124750	55.932	59	25	1	19	77	68	125	3.09e-17	71.6
MS.gene50669.t1	MTR_1g094750	54.839	62	27	1	19	80	49	109	7.16e-17	69.7
MS.gene50669.t1	MTR_1g009150	52.174	69	32	1	12	80	63	130	5.09e-16	68.9
MS.gene50669.t1	MTR_4g005310	46.970	66	34	1	16	80	58	123	5.29e-15	65.9
MS.gene50669.t1	MTR_3g105900	65.909	44	15	0	17	60	1169	1212	1.53e-14	67.4
MS.gene50669.t1	MTR_7g118010	47.059	68	33	2	20	85	23	89	1.90e-14	63.2
MS.gene50669.t1	MTR_1g061570	51.515	66	31	1	19	84	18	82	2.92e-14	63.2
MS.gene50669.t1	MTR_7g101740	48.438	64	32	1	19	82	39	101	6.95e-14	62.0
MS.gene50669.t1	MTR_4g005320	49.180	61	30	1	20	80	70	129	8.75e-14	62.8
MS.gene50669.t1	MTR_3g092220	37.647	85	50	2	3	85	16	99	8.91e-14	61.6
MS.gene50669.t1	MTR_1g063950	45.161	62	33	1	19	80	47	107	2.02e-13	60.8
MS.gene50669.t1	MTR_4g025830	44.118	68	34	2	20	84	79	145	2.28e-13	61.6
MS.gene50669.t1	MTR_5g008380	90.323	31	3	0	55	85	247	277	2.45e-13	63.2
MS.gene50669.t1	MTR_1g024085	50.847	59	28	1	19	77	36	93	3.56e-13	60.8
MS.gene50669.t1	MTR_0388s0020	41.558	77	41	2	11	84	66	141	4.37e-13	60.8
MS.gene50669.t1	MTR_3g109160	45.455	77	41	1	4	80	53	128	5.73e-13	60.8
MS.gene50669.t1	MTR_8g461210	49.153	59	29	1	19	77	34	91	2.73e-12	57.8
MS.gene50669.t1	MTR_8g026730	41.176	68	37	2	20	85	27	93	3.12e-12	57.4
MS.gene50669.t1	MTR_4g072160	48.387	62	31	1	19	80	36	96	3.69e-12	58.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene50669.t1	AT4G38840	72.059	68	18	1	19	85	32	99	3.41e-33	110
MS.gene50669.t1	AT4G34810	66.234	77	22	1	11	83	39	115	3.84e-30	103
MS.gene50669.t1	AT4G34800	58.621	87	32	2	1	83	1	87	1.09e-29	101
MS.gene50669.t1	AT5G18050	59.459	74	29	1	13	85	17	90	2.13e-29	100
MS.gene50669.t1	AT4G38850	59.259	81	26	2	8	85	13	89	3.31e-29	100
MS.gene50669.t1	AT5G18060	60.811	74	28	1	13	85	17	90	3.37e-29	100
MS.gene50669.t1	AT2G21210	57.895	76	30	1	12	85	20	95	5.87e-29	99.8
MS.gene50669.t1	AT5G18020	61.972	71	26	1	13	82	17	87	6.62e-29	99.4
MS.gene50669.t1	AT5G18080	56.962	79	32	2	8	85	13	90	7.84e-29	99.4
MS.gene50669.t1	AT2G21200	57.895	76	31	1	10	84	11	86	1.15e-28	98.6
MS.gene50669.t1	AT5G18030	56.962	79	30	2	8	85	13	88	2.08e-28	98.2
MS.gene50669.t1	AT4G38825	59.722	72	28	1	15	85	18	89	2.21e-28	98.2
MS.gene50669.t1	AT2G21210	57.895	76	30	1	12	85	87	162	4.09e-28	99.8
MS.gene50669.t1	AT5G18010	54.430	79	34	2	8	85	13	90	5.74e-27	94.4
MS.gene50669.t1	AT4G34770	55.952	84	32	2	4	85	22	102	6.94e-26	92.0
MS.gene50669.t1	AT4G13790	47.619	84	42	1	3	84	8	91	1.00e-25	91.3
MS.gene50669.t1	AT3G03820	54.545	77	32	1	12	85	19	95	1.35e-25	91.3
MS.gene50669.t1	AT3G03850	62.687	67	23	1	21	85	26	92	2.76e-25	90.5
MS.gene50669.t1	AT3G03840	56.944	72	29	1	16	85	23	94	3.79e-25	90.1
MS.gene50669.t1	AT3G03830	55.263	76	31	1	13	85	17	92	1.33e-24	88.6
MS.gene50669.t1	AT4G34790	63.636	66	22	1	20	83	39	104	4.72e-24	87.8
MS.gene50669.t1	AT4G38860	48.352	91	37	1	5	85	15	105	1.07e-22	84.0
MS.gene50669.t1	AT4G34780	57.746	71	27	1	17	84	25	95	2.72e-22	83.2
MS.gene50669.t1	AT2G21220	48.864	88	34	2	5	82	15	101	5.03e-21	79.7
MS.gene50669.t1	AT4G34760	56.923	65	27	1	18	82	41	104	1.26e-20	79.0
MS.gene50669.t1	AT1G75580	46.429	84	44	1	1	84	25	107	1.32e-20	79.0
MS.gene50669.t1	AT2G16580	55.385	65	28	1	18	82	42	105	6.29e-20	77.0
MS.gene50669.t1	AT4G36110	47.674	86	36	2	5	82	17	101	3.08e-19	75.5
MS.gene50669.t1	AT1G19830	52.239	67	31	1	18	84	46	111	2.34e-18	73.6
MS.gene50669.t1	AT2G18010	53.125	64	29	1	19	82	47	109	3.89e-18	72.8
MS.gene50669.t1	AT3G43120	55.932	59	25	1	19	77	78	135	5.18e-18	73.6
MS.gene50669.t1	AT5G20810	57.627	59	24	1	19	77	78	135	2.93e-17	72.0
MS.gene50669.t1	AT5G20810	57.627	59	24	1	19	77	78	135	4.78e-17	72.0
MS.gene50669.t1	AT5G66260	44.565	92	42	3	2	85	8	98	3.96e-15	64.7
MS.gene50669.t1	AT3G20220	51.613	62	28	2	20	80	47	107	4.82e-15	65.1
MS.gene50669.t1	AT3G61900	40.964	83	45	2	6	85	16	97	7.24e-15	65.1
MS.gene50669.t1	AT3G51200	45.122	82	39	3	8	84	23	103	2.67e-14	62.8
MS.gene50669.t1	AT4G34750	40.541	74	43	1	9	82	26	98	7.02e-14	62.8
MS.gene50669.t1	AT4G34750	40.541	74	43	1	9	82	26	98	7.02e-14	62.8
MS.gene50669.t1	AT2G37030	49.206	63	31	1	19	81	48	109	8.09e-14	62.0
MS.gene50669.t1	AT2G46690	44.444	72	36	2	9	77	13	83	9.29e-14	62.0
MS.gene50669.t1	AT2G24400	49.315	73	35	2	9	80	52	123	5.34e-13	61.2
MS.gene50669.t1	AT1G75590	49.153	59	29	1	19	77	41	98	5.67e-13	60.5
MS.gene50669.t1	AT5G10990	49.153	59	29	1	19	77	40	97	7.69e-13	60.1
MS.gene50669.t1	AT4G31320	46.575	73	37	2	9	80	68	139	9.96e-13	60.5
MS.gene50669.t1	AT1G19840	47.059	68	33	2	12	77	31	97	2.62e-12	58.9
MS.gene50669.t1	AT3G53250	44.444	63	31	1	19	81	51	109	3.39e-12	57.8
MS.gene50669.t1	AT3G53250	44.444	63	31	1	19	81	82	140	6.95e-12	57.8
MS.gene50669.t1	AT2G45210	46.667	60	28	2	16	72	75	133	2.63e-11	56.2
MS.gene50669.t1	AT3G12830	38.272	81	49	1	5	85	35	114	2.98e-11	55.5
MS.gene50669.t1	AT3G60690	50.000	56	24	2	20	72	88	142	3.72e-11	56.2
MS.gene50669.t1	AT4G00880	42.857	77	39	3	3	77	13	86	5.34e-11	54.7

Find 19 sgRNAs with CRISPR-Local

Find 21 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CAGCATGGCTCAACAATTCT+TGG	0.302736	4.3:+33367563	None:intergenic
GTTTGGTTCAAATATGATAT+AGG	0.387729	4.3:+33367592	None:intergenic
ACAATTCTTGGAATGAGGTT+TGG	0.392315	4.3:+33367575	None:intergenic
GCTCAACAATTCTTGGAATG+AGG	0.471996	4.3:+33367570	None:intergenic
TACACTGCTAGATATCCCTT+TGG	0.477829	4.3:+33367646	None:intergenic
GACATCATCTTCAAAAGTTG+TGG	0.500110	4.3:-33367674	MS.gene50669:CDS
AAAAGTTGTGGACGTTCCAA+AGG	0.530601	4.3:-33367662	MS.gene50669:CDS
TTTGAATACGACCATCCAAT+GGG	0.536776	4.3:-33367532	MS.gene50669:CDS
GTTTACCTAGTATCATCAAA+AGG	0.538666	4.3:-33367696	MS.gene50669:CDS
ATTTGAATACGACCATCCAA+TGG	0.549140	4.3:-33367533	MS.gene50669:CDS
AAAGTTGTGGACGTTCCAAA+GGG	0.571238	4.3:-33367661	MS.gene50669:CDS
AAGAAAACTTCTTCTCTGCA+AGG	0.584904	4.3:+33367496	None:intergenic
ATTCAAATTGTTCCTCAGCA+TGG	0.588318	4.3:+33367548	None:intergenic
TAGTGAGACCACCCATTGGA+TGG	0.596413	4.3:+33367521	None:intergenic
GGAATAGTGAGACCACCCAT+TGG	0.603922	4.3:+33367517	None:intergenic
AGAATTGTTGAGCCATGCTG+AGG	0.641874	4.3:-33367560	MS.gene50669:CDS
GAATACGACCATCCAATGGG+TGG	0.687778	4.3:-33367529	MS.gene50669:CDS
GGATATCTAGCAGTGTACGT+AGG	0.713792	4.3:-33367640	MS.gene50669:CDS
ACGTAGGAGAGAAAATGAAG+CGG	0.744637	4.3:-33367624	MS.gene50669:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	GTTTGGTTCAAATATGATAT+AGG	+	chr4.3:33367588-33367607	None:intergenic	25.0%
!!!	TTTTGATGATACTAGGTAAA+CGG	+	chr4.3:33367482-33367501	None:intergenic	25.0%
	GTTTACCTAGTATCATCAAA+AGG	-	chr4.3:33367481-33367500	MS.gene50669:CDS	30.0%
	AAGAAAACTTCTTCTCTGCA+AGG	+	chr4.3:33367684-33367703	None:intergenic	35.0%
	ACAATTCTTGGAATGAGGTT+TGG	+	chr4.3:33367605-33367624	None:intergenic	35.0%
	ATTCAAATTGTTCCTCAGCA+TGG	+	chr4.3:33367632-33367651	None:intergenic	35.0%
	ATTTGAATACGACCATCCAA+TGG	-	chr4.3:33367644-33367663	MS.gene50669:CDS	35.0%
	GACATCATCTTCAAAAGTTG+TGG	-	chr4.3:33367503-33367522	MS.gene50669:CDS	35.0%
	TTTGAATACGACCATCCAAT+GGG	-	chr4.3:33367645-33367664	MS.gene50669:CDS	35.0%
!!	GATGTCCTTTTGATGATACT+AGG	+	chr4.3:33367489-33367508	None:intergenic	35.0%
	AAAAGTTGTGGACGTTCCAA+AGG	-	chr4.3:33367515-33367534	MS.gene50669:CDS	40.0%
	AAAGTTGTGGACGTTCCAAA+GGG	-	chr4.3:33367516-33367535	MS.gene50669:CDS	40.0%
	ACGTAGGAGAGAAAATGAAG+CGG	-	chr4.3:33367553-33367572	MS.gene50669:CDS	40.0%
	GCTCAACAATTCTTGGAATG+AGG	+	chr4.3:33367610-33367629	None:intergenic	40.0%
	TACACTGCTAGATATCCCTT+TGG	+	chr4.3:33367534-33367553	None:intergenic	40.0%
	AGAATTGTTGAGCCATGCTG+AGG	-	chr4.3:33367617-33367636	MS.gene50669:CDS	45.0%
	CAGCATGGCTCAACAATTCT+TGG	+	chr4.3:33367617-33367636	None:intergenic	45.0%
	GGATATCTAGCAGTGTACGT+AGG	-	chr4.3:33367537-33367556	MS.gene50669:CDS	45.0%
	GAATACGACCATCCAATGGG+TGG	-	chr4.3:33367648-33367667	MS.gene50669:CDS	50.0%
	GGAATAGTGAGACCACCCAT+TGG	+	chr4.3:33367663-33367682	None:intergenic	50.0%
	TAGTGAGACCACCCATTGGA+TGG	+	chr4.3:33367659-33367678	None:intergenic	50.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.3	gene	33367471	33367728	33367471	ID=MS.gene50669
chr4.3	mRNA	33367471	33367728	33367471	ID=MS.gene50669.t1;Parent=MS.gene50669
chr4.3	exon	33367471	33367728	33367471	ID=MS.gene50669.t1.exon1;Parent=MS.gene50669.t1
chr4.3	CDS	33367471	33367728	33367471	ID=cds.MS.gene50669.t1;Parent=MS.gene50669.t1

Gene Sequence	>MS.gene50669 ATGGGTTTCCGTTTACCTAGTATCATCAAAAGGACATCATCTTCAAAAGTTGTGGACGTTCCAAAGGGATATCTAGCAGTGTACGTAGGAGAGAAAATGAAGCGGTTTGTGATTCCTATATCATATTTGAACCAAACCTCATTCCAAGAATTGTTGAGCCATGCTGAGGAACAATTTGAATACGACCATCCAATGGGTGGTCTCACTATTCCTTGCAGAGAAGAAGTTTTCTTAGATATCACTTCTAGCTTGAATTAG
Protein sequence	>MS.gene50669.t1 MGFRLPSIIKRTSSSKVVDVPKGYLAVYVGEKMKRFVIPISYLNQTSFQELLSHAEEQFEYDHPMGGLTIPCREEVFLDITSSLN