AlfalfaGEDB | MS.gene50673

M. sativa cultivar XinJiangDaYe / MS.gene50673

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene50673.t1	XP_003607135.1	84.8	92	14	0	1	92	1	92	4.80E-38	166.8

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene50673.t1	P32295	74.4	90	23	0	1	90	1	90	1.0e-33	143.7

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene50673.t1	G7JM89	84.8	92	14	0	1	92	1	92	3.5e-38	166.8

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene50676	MS.gene50673	PPI
MS.gene01358	MS.gene50673	PPI
MS.gene23370	MS.gene50673	PPI
MS.gene77529	MS.gene50673	PPI
MS.gene014667	MS.gene50673	PPI
MS.gene003594	MS.gene50673	PPI
MS.gene50673	MS.gene50652	PPI
MS.gene50673	MS.gene002380	PPI
MS.gene50665	MS.gene50673	PPI
MS.gene50673	MS.gene68165	PPI
MS.gene057778	MS.gene50673	PPI
MS.gene50673	MS.gene77526	PPI
MS.gene50673	MS.gene045366	PPI
MS.gene50673	MS.gene23372	PPI
MS.gene50763	MS.gene50673	PPI
MS.gene50673	MS.gene75315	PPI
MS.gene045365	MS.gene50673	PPI
MS.gene50673	MS.gene68164	PPI
MS.gene50673	MS.gene68759	PPI
MS.gene50673	MS.gene003586	PPI
MS.gene50673	MS.gene003627	PPI
MS.gene50659	MS.gene50673	PPI
MS.gene50673	MS.gene031200	PPI
MS.gene75316	MS.gene50673	PPI
MS.gene50673	MS.gene75676	PPI
MS.gene057790	MS.gene50673	PPI
MS.gene003624	MS.gene50673	PPI
MS.gene50673	MS.gene50687	PPI
MS.gene031201	MS.gene50673	PPI
MS.gene50673	MS.gene014223	PPI
MS.gene50673	MS.gene014669	PPI
MS.gene50673	MS.gene057808	PPI
MS.gene77523	MS.gene50673	PPI
MS.gene50673	MS.gene062963	PPI
MS.gene50673	MS.gene68163	PPI
MS.gene79890	MS.gene50673	PPI
MS.gene50673	MS.gene057818	PPI
MS.gene003615	MS.gene50673	PPI
MS.gene50673	MS.gene79889	PPI
MS.gene50673	MS.gene045368	PPI
MS.gene062973	MS.gene50673	PPI
MS.gene003602	MS.gene50673	PPI
MS.gene047517	MS.gene50673	PPI
MS.gene50673	MS.gene045360	PPI
MS.gene50673	MS.gene014222	PPI
MS.gene50673	MS.gene79888	PPI
MS.gene50673	MS.gene75678	PPI
MS.gene50673	MS.gene79885	PPI
MS.gene50673	MS.gene75314	PPI
MS.gene50673	MS.gene01764	PPI
MS.gene062984	MS.gene50673	PPI
MS.gene50673	MS.gene031199	PPI
MS.gene40327	MS.gene50673	PPI
MS.gene50673	MS.gene75673	PPI
MS.gene50673	MS.gene68760	PPI
MS.gene50673	MS.gene031198	PPI
MS.gene50673	MS.gene50764	PPI
MS.gene003591	MS.gene50673	PPI
MS.gene003587	MS.gene50673	PPI
MS.gene003590	MS.gene50673	PPI
MS.gene50673	MS.gene003577	PPI
MS.gene062943	MS.gene50673	PPI
MS.gene063112	MS.gene50673	PPI
MS.gene50673	MS.gene75672	PPI
MS.gene50673	MS.gene75674	PPI
MS.gene50673	MS.gene50654	PPI
MS.gene003608	MS.gene50673	PPI
MS.gene50673	MS.gene50675	PPI
MS.gene50673	MS.gene014670	PPI
MS.gene50673	MS.gene77524	PPI
MS.gene50673	MS.gene68162	PPI
MS.gene50673	MS.gene79887	PPI
MS.gene50766	MS.gene50673	PPI
MS.gene50673	MS.gene75679	PPI
MS.gene50673	MS.gene68761	PPI
MS.gene75677	MS.gene50673	PPI
MS.gene50673	MS.gene40325	PPI
MS.gene003625	MS.gene50673	PPI
MS.gene50673	MS.gene50677	PPI
MS.gene50673	MS.gene50684	PPI
MS.gene045361	MS.gene50673	PPI
MS.gene50673	MS.gene057797	PPI
MS.gene50673	MS.gene003614	PPI
MS.gene50673	MS.gene014668	PPI
MS.gene50673	MS.gene77528	PPI
MS.gene50673	MS.gene79886	PPI
MS.gene50673	MS.gene014671	PPI
MS.gene50673	MS.gene50765	PPI
MS.gene062979	MS.gene50673	PPI
MS.gene50673	MS.gene003596	PPI
MS.gene50673	MS.gene062988	PPI
MS.gene50673	MS.gene23371	PPI
MS.gene50673	MS.gene045362	PPI
MS.gene50673	MS.gene062974	PPI
MS.gene40326	MS.gene50673	PPI
MS.gene50673	MS.gene003583	PPI
MS.gene50673	MS.gene062951	PPI
MS.gene50673	MS.gene057801	PPI
MS.gene062952	MS.gene50673	PPI
MS.gene50673	MS.gene77527	PPI
MS.gene50673	MS.gene79891	PPI
MS.gene50673	MS.gene057795	PPI
MS.gene50673	MS.gene045367	PPI
MS.gene50673	MS.gene045364	PPI
MS.gene50673	MS.gene045363	PPI
MS.gene50673	MS.gene75675	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene50673.t1	MTR_4g072620	84.783	92	14	0	1	92	1	92	3.23e-56	168
MS.gene50673.t1	MTR_4g072480	83.696	92	15	0	1	92	1	92	2.23e-55	166
MS.gene50673.t1	MTR_4g072730	83.333	90	15	0	1	90	1	90	2.75e-54	163
MS.gene50673.t1	MTR_4g072570	83.696	92	15	0	1	92	1	92	1.16e-53	162
MS.gene50673.t1	MTR_4g072460	82.609	92	16	0	1	92	1	92	1.24e-53	162
MS.gene50673.t1	MTR_4g072680	82.609	92	16	0	1	92	1	92	2.56e-53	161
MS.gene50673.t1	MTR_4g072500	81.522	92	17	0	1	92	1	92	2.82e-53	161
MS.gene50673.t1	MTR_4g072530	78.889	90	19	0	1	90	1	90	1.74e-51	156
MS.gene50673.t1	MTR_4g072640	78.889	90	19	0	1	90	1	90	2.09e-50	154
MS.gene50673.t1	MTR_4g072660	78.261	92	15	1	1	92	1	87	1.87e-48	149
MS.gene50673.t1	MTR_4g072310	74.194	93	23	1	1	92	1	93	3.22e-47	145
MS.gene50673.t1	MTR_4g072860	76.344	93	21	1	1	92	1	93	5.39e-47	145
MS.gene50673.t1	MTR_3g084180	72.826	92	25	0	1	92	1	92	3.20e-46	143
MS.gene50673.t1	MTR_3g084150	71.739	92	26	0	1	92	1	92	2.23e-45	141
MS.gene50673.t1	MTR_4g072270	70.968	93	26	1	1	92	1	93	2.38e-45	141
MS.gene50673.t1	MTR_4g072230	74.194	93	21	2	1	92	1	91	3.29e-45	140
MS.gene50673.t1	MTR_3g117630	72.826	92	25	0	1	92	1	92	4.92e-44	137
MS.gene50673.t1	MTR_8g461410	69.565	92	28	0	1	92	1	92	6.27e-44	137
MS.gene50673.t1	MTR_4g072880	68.132	91	28	1	1	90	1	91	8.50e-44	137
MS.gene50673.t1	MTR_4g072240	69.231	91	27	1	1	90	1	91	1.65e-43	136
MS.gene50673.t1	MTR_4g072250	74.725	91	21	2	1	90	1	90	1.68e-43	136
MS.gene50673.t1	MTR_5g008360	80.000	80	16	0	13	92	4	83	3.74e-43	135
MS.gene50673.t1	MTR_4g072870	69.231	91	27	1	1	90	1	91	4.95e-43	135
MS.gene50673.t1	MTR_4g072220	65.591	93	31	1	1	92	1	93	7.30e-42	132
MS.gene50673.t1	MTR_4g072300	65.934	91	30	1	1	90	1	91	8.39e-42	132
MS.gene50673.t1	MTR_3g084250	68.478	92	29	0	1	92	1	92	9.85e-42	132
MS.gene50673.t1	MTR_3g110042	72.414	87	24	0	1	87	1	87	1.10e-41	132
MS.gene50673.t1	MTR_4g072850	69.149	94	27	1	1	92	1	94	2.06e-41	131
MS.gene50673.t1	MTR_3g084240	66.304	92	31	0	1	92	1	92	4.83e-41	130
MS.gene50673.t1	MTR_4g072490	70.000	90	22	1	1	90	1	85	6.10e-41	129
MS.gene50673.t1	MTR_4g072600	71.111	90	21	1	1	90	1	85	6.54e-41	129
MS.gene50673.t1	MTR_4g072370	69.231	91	26	1	1	91	1	89	1.20e-40	129
MS.gene50673.t1	MTR_3g084170	66.304	92	31	0	1	92	1	92	1.26e-40	129
MS.gene50673.t1	MTR_5g008370	82.192	73	13	0	18	90	18	90	1.36e-40	130
MS.gene50673.t1	MTR_4g072330	68.132	91	27	1	1	91	1	89	1.40e-40	129
MS.gene50673.t1	MTR_4g072470	72.222	90	20	1	1	90	1	85	5.02e-40	127
MS.gene50673.t1	MTR_3g084190	69.565	92	28	0	1	92	1	92	6.80e-40	127
MS.gene50673.t1	MTR_4g072740	68.889	90	23	1	1	90	1	85	7.53e-40	127
MS.gene50673.t1	MTR_4g072890	63.736	91	32	1	1	90	1	91	1.01e-39	127
MS.gene50673.t1	MTR_3g110032	66.667	93	30	1	1	92	1	93	1.65e-39	126
MS.gene50673.t1	MTR_4g072260	62.366	93	34	1	1	92	1	93	2.39e-39	126
MS.gene50673.t1	MTR_3g084210	68.478	92	29	0	1	92	1	92	2.65e-39	125
MS.gene50673.t1	MTR_4g072580	67.778	90	24	1	1	90	1	85	3.87e-39	125
MS.gene50673.t1	MTR_8g461420	68.889	90	28	0	1	90	1	90	7.26e-39	124
MS.gene50673.t1	MTR_4g072610	68.889	90	22	1	1	90	1	84	8.75e-39	124
MS.gene50673.t1	MTR_3g084160	68.478	92	29	0	1	92	1	92	9.66e-39	124
MS.gene50673.t1	MTR_4g050700	65.591	93	31	1	1	92	1	93	1.01e-38	124
MS.gene50673.t1	MTR_2g012410	65.591	93	31	1	1	92	1	93	1.01e-38	124
MS.gene50673.t1	MTR_4g072940	80.000	70	14	0	21	90	53	122	1.02e-38	125
MS.gene50673.t1	MTR_3g084260	65.934	91	30	1	1	90	1	91	1.07e-38	124
MS.gene50673.t1	MTR_3g110045	72.222	90	25	0	3	92	62	151	1.35e-38	126
MS.gene50673.t1	MTR_3g084220	63.043	92	34	0	1	92	1	92	2.35e-38	123
MS.gene50673.t1	MTR_4g072830	67.416	89	27	1	1	89	1	87	2.82e-38	123
MS.gene50673.t1	MTR_3g084230	68.889	90	28	0	1	90	1	90	3.64e-38	123
MS.gene50673.t1	MTR_3g110038	63.043	92	34	0	1	92	1	92	3.89e-38	123
MS.gene50673.t1	MTR_4g072630	63.333	90	29	1	1	90	1	86	1.30e-37	121
MS.gene50673.t1	MTR_4g072590	79.412	68	14	0	23	90	18	85	7.30e-37	119
MS.gene50673.t1	MTR_4g072820	68.132	91	22	2	1	90	1	85	7.77e-37	119
MS.gene50673.t1	MTR_4g072550	73.973	73	19	0	20	92	31	103	1.35e-36	119
MS.gene50673.t1	MTR_4g072380	67.391	92	24	2	1	91	1	87	1.74e-36	119
MS.gene50673.t1	MTR_4g072465	62.222	90	30	1	1	90	1	86	2.30e-36	118
MS.gene50673.t1	MTR_4g072540	75.714	70	17	0	21	90	17	86	2.54e-36	118
MS.gene50673.t1	MTR_4g072650	64.444	90	26	1	1	90	1	84	6.24e-36	117
MS.gene50673.t1	MTR_4g072720	74.286	70	18	0	21	90	17	86	2.35e-35	115
MS.gene50673.t1	MTR_4g072670	74.286	70	18	0	21	90	17	86	1.77e-34	113
MS.gene50673.t1	MTR_4g072450	77.941	68	15	0	23	90	18	85	1.43e-33	111
MS.gene50673.t1	MTR_4g072510	71.429	70	20	0	21	90	17	86	2.35e-33	110
MS.gene50673.t1	MTR_4g072910	68.000	75	23	1	16	90	27	100	1.94e-32	108
MS.gene50673.t1	MTR_5g008350	65.823	79	22	1	1	79	1	74	5.58e-32	107
MS.gene50673.t1	MTR_4g072980	58.065	93	33	2	1	92	8	95	6.62e-32	107
MS.gene50673.t1	MTR_4g072560	57.647	85	35	1	8	91	15	99	9.35e-32	107
MS.gene50673.t1	MTR_4g072770	61.111	90	25	1	1	90	1	80	1.45e-31	106
MS.gene50673.t1	MTR_4g072690	73.529	68	18	0	23	90	18	85	2.63e-31	105
MS.gene50673.t1	MTR_4g072750	62.353	85	28	2	1	81	1	85	3.82e-31	105
MS.gene50673.t1	MTR_3g117640	69.118	68	20	1	24	90	33	100	2.63e-29	101
MS.gene50673.t1	MTR_4g072290	58.824	85	21	1	8	92	9	79	1.61e-28	98.2
MS.gene50673.t1	MTR_3g084200	59.722	72	29	0	1	72	1	72	1.11e-27	97.1
MS.gene50673.t1	MTR_4g072280	58.667	75	30	1	1	74	1	75	1.85e-27	95.5
MS.gene50673.t1	MTR_6g077850	56.716	67	29	0	24	90	33	99	1.06e-25	92.0
MS.gene50673.t1	MTR_3g113310	57.353	68	28	1	23	90	40	106	2.20e-25	91.3
MS.gene50673.t1	MTR_3g110035	62.121	66	25	0	27	92	73	138	8.02e-25	90.9
MS.gene50673.t1	MTR_3g117610	59.701	67	26	1	23	89	43	108	1.33e-24	89.4
MS.gene50673.t1	MTR_4g072190	51.765	85	39	2	5	89	17	99	3.24e-24	88.2
MS.gene50673.t1	MTR_4g072930	52.439	82	34	2	15	91	30	111	2.81e-23	85.9
MS.gene50673.t1	MTR_5g021820	54.545	66	29	1	24	89	39	103	2.89e-21	80.9
MS.gene50673.t1	MTR_8g076040	48.101	79	40	1	11	89	27	104	3.49e-21	80.5
MS.gene50673.t1	MTR_4g124750	51.515	66	31	1	24	89	68	132	2.03e-19	77.4
MS.gene50673.t1	MTR_2g043960	50.000	68	33	1	24	91	75	141	3.19e-19	77.0
MS.gene50673.t1	MTR_4g072840	47.826	92	16	3	1	91	1	61	1.93e-18	72.4
MS.gene50673.t1	MTR_8g461400	43.478	92	26	1	1	92	1	66	3.35e-18	72.0
MS.gene50673.t1	MTR_8g461210	42.857	84	47	1	6	89	16	98	1.32e-17	71.6
MS.gene50673.t1	MTR_3g092220	42.353	85	43	3	1	83	12	92	2.25e-17	71.2
MS.gene50673.t1	MTR_7g118010	48.529	68	32	2	25	90	23	89	4.28e-17	70.1
MS.gene50673.t1	MTR_4g005310	48.052	77	34	2	15	85	47	123	1.10e-16	70.5
MS.gene50673.t1	MTR_1g024085	50.000	66	32	1	18	83	30	94	2.47e-16	69.3
MS.gene50673.t1	MTR_0388s0020	41.975	81	43	2	12	89	62	141	2.69e-16	69.3
MS.gene50673.t1	MTR_8g026730	45.588	68	34	2	25	90	27	93	3.97e-16	67.8
MS.gene50673.t1	MTR_1g009150	50.000	68	33	1	18	85	64	130	2.02e-15	67.8
MS.gene50673.t1	MTR_4g072160	47.887	71	34	2	16	85	28	96	3.24e-15	66.2
MS.gene50673.t1	MTR_4g025830	43.939	66	33	2	25	87	79	143	3.55e-15	66.6
MS.gene50673.t1	MTR_1g061570	48.387	62	31	1	24	85	18	78	4.62e-15	65.5
MS.gene50673.t1	MTR_1g059770	44.615	65	35	1	25	89	49	112	7.23e-15	65.1
MS.gene50673.t1	MTR_1g094750	50.000	62	30	1	24	85	49	109	7.42e-15	64.7
MS.gene50673.t1	MTR_1g063950	43.056	72	40	1	17	88	40	110	9.42e-15	64.7
MS.gene50673.t1	MTR_3g109160	45.946	74	39	1	12	85	56	128	4.31e-14	63.9
MS.gene50673.t1	MTR_7g101740	48.438	64	32	1	24	87	39	101	5.09e-14	62.4
MS.gene50673.t1	MTR_4g005320	49.180	61	30	1	25	85	70	129	5.88e-14	63.5
MS.gene50673.t1	MTR_2g066830	39.241	79	47	1	13	91	46	123	1.99e-13	61.6
MS.gene50673.t1	MTR_8g101520	39.024	82	49	1	9	90	34	114	9.96e-13	60.1
MS.gene50673.t1	MTR_3g097120	44.595	74	32	2	20	85	4	76	1.11e-12	58.9
MS.gene50673.t1	MTR_7g104940	37.333	75	42	2	15	89	44	113	1.26e-12	59.3
MS.gene50673.t1	MTR_7g405740	45.902	61	32	1	25	85	67	126	2.62e-12	59.3
MS.gene50673.t1	MTR_3g105900	72.222	36	10	0	24	59	1171	1206	2.63e-12	61.2
MS.gene50673.t1	MTR_7g104950	35.000	80	46	2	10	89	40	113	2.71e-12	58.5
MS.gene50673.t1	MTR_8g096470	46.667	60	31	1	26	85	47	105	3.06e-12	57.8
MS.gene50673.t1	MTR_8g101530	39.130	69	41	1	19	87	34	101	1.30e-11	57.0
MS.gene50673.t1	MTR_3g098970	32.895	76	50	1	15	90	43	117	1.64e-11	57.0
MS.gene50673.t1	MTR_8g096440	39.130	69	41	1	14	82	34	101	3.69e-11	55.8
MS.gene50673.t1	MTR_2g095430	39.506	81	41	3	5	78	22	101	4.65e-11	55.5
MS.gene50673.t1	MTR_8g096500	46.552	58	30	1	25	82	49	105	6.11e-11	55.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene50673.t1	AT4G34770	63.636	88	26	2	9	90	15	102	1.24e-32	109
MS.gene50673.t1	AT3G03840	60.920	87	29	2	3	87	8	91	3.84e-32	108
MS.gene50673.t1	AT5G18020	65.432	81	21	2	8	87	13	87	4.65e-32	107
MS.gene50673.t1	AT2G21200	57.647	85	34	2	7	89	2	86	1.13e-31	106
MS.gene50673.t1	AT5G18060	59.524	84	32	2	8	90	8	90	1.49e-31	106
MS.gene50673.t1	AT4G38840	69.118	68	20	1	24	90	32	99	1.53e-31	106
MS.gene50673.t1	AT5G18080	55.556	90	38	2	1	89	1	89	3.07e-31	105
MS.gene50673.t1	AT4G38850	58.889	90	30	3	1	87	1	86	4.29e-31	105
MS.gene50673.t1	AT4G38825	59.036	83	33	1	9	90	7	89	1.02e-30	104
MS.gene50673.t1	AT5G18050	54.651	86	38	1	5	89	4	89	1.43e-30	103
MS.gene50673.t1	AT5G18030	65.278	72	24	1	20	90	17	88	1.81e-30	103
MS.gene50673.t1	AT3G03850	58.889	90	30	2	3	90	8	92	5.59e-30	102
MS.gene50673.t1	AT3G03820	59.036	83	28	2	8	87	13	92	7.42e-30	102
MS.gene50673.t1	AT5G18010	52.747	91	41	2	1	90	1	90	1.91e-29	100
MS.gene50673.t1	AT2G21210	58.108	74	29	1	19	90	22	95	6.28e-29	100
MS.gene50673.t1	AT4G34800	60.274	73	26	1	13	82	9	81	1.14e-28	99.4
MS.gene50673.t1	AT2G21210	58.108	74	29	1	19	90	89	162	3.20e-28	100
MS.gene50673.t1	AT4G34810	67.742	62	16	1	25	82	48	109	3.27e-27	96.3
MS.gene50673.t1	AT3G03830	53.409	88	32	2	3	87	8	89	4.36e-26	92.8
MS.gene50673.t1	AT4G13790	44.944	89	47	1	1	87	1	89	1.29e-25	91.3
MS.gene50673.t1	AT4G34790	61.538	65	23	1	25	87	39	103	1.40e-24	89.4
MS.gene50673.t1	AT4G34780	60.563	71	25	1	23	90	26	96	3.62e-24	88.2
MS.gene50673.t1	AT1G75580	52.500	80	37	1	10	89	29	107	1.09e-23	87.0
MS.gene50673.t1	AT4G34760	57.353	68	28	1	23	90	41	107	2.38e-23	86.3
MS.gene50673.t1	AT4G38860	55.882	68	30	0	23	90	38	105	2.49e-23	85.9
MS.gene50673.t1	AT2G21220	58.462	65	26	1	23	87	38	101	3.52e-23	85.5
MS.gene50673.t1	AT1G19830	56.164	73	30	2	18	89	41	112	3.41e-20	78.6
MS.gene50673.t1	AT3G43120	42.529	87	49	1	3	89	57	142	4.01e-20	79.3
MS.gene50673.t1	AT2G16580	55.385	65	28	1	23	87	42	105	5.60e-20	77.8
MS.gene50673.t1	AT4G36110	54.688	64	28	1	24	87	39	101	2.95e-19	75.5
MS.gene50673.t1	AT5G66260	48.315	89	42	2	5	90	11	98	3.63e-19	75.5
MS.gene50673.t1	AT5G20810	51.515	66	31	1	24	89	78	142	6.59e-19	76.3
MS.gene50673.t1	AT5G20810	47.945	73	37	1	17	89	71	142	1.37e-18	76.3
MS.gene50673.t1	AT2G18010	53.125	64	29	1	24	87	47	109	2.44e-18	73.6
MS.gene50673.t1	AT3G20220	50.000	76	32	3	11	85	37	107	6.06e-18	72.8
MS.gene50673.t1	AT2G46690	40.000	85	47	2	9	90	8	91	1.06e-16	69.7
MS.gene50673.t1	AT1G75590	50.685	73	31	2	15	83	28	99	1.56e-16	70.1
MS.gene50673.t1	AT5G10990	51.667	60	28	1	24	83	40	98	4.11e-16	68.9
MS.gene50673.t1	AT4G34750	45.312	64	34	1	24	87	36	98	4.68e-16	68.6
MS.gene50673.t1	AT4G34750	45.312	64	34	1	24	87	36	98	4.68e-16	68.6
MS.gene50673.t1	AT3G61900	44.286	70	35	2	24	90	29	97	8.70e-16	67.8
MS.gene50673.t1	AT3G51200	53.125	64	28	2	20	82	34	96	9.98e-16	66.6
MS.gene50673.t1	AT1G19840	53.333	60	27	1	24	83	40	98	1.58e-15	67.4
MS.gene50673.t1	AT3G12830	40.698	86	49	2	6	91	32	115	2.37e-15	66.6
MS.gene50673.t1	AT2G37030	47.692	65	33	1	24	88	48	111	3.21e-15	65.9
MS.gene50673.t1	AT4G00880	47.826	69	33	2	24	90	27	94	3.56e-15	65.9
MS.gene50673.t1	AT5G53590	43.056	72	35	2	24	90	45	115	1.05e-14	65.1
MS.gene50673.t1	AT3G60690	45.455	66	32	2	25	87	88	152	2.72e-14	64.7
MS.gene50673.t1	AT2G45210	40.845	71	38	2	20	87	74	143	4.69e-14	63.9
MS.gene50673.t1	AT3G03847	49.275	69	30	2	18	82	60	127	1.32e-13	62.0
MS.gene50673.t1	AT4G31320	45.455	66	35	1	20	85	75	139	1.49e-13	63.2
MS.gene50673.t1	AT1G56150	46.269	67	35	1	25	91	38	103	1.56e-13	61.2
MS.gene50673.t1	AT2G36210	41.333	75	44	0	15	89	44	118	1.79e-13	61.6
MS.gene50673.t1	AT2G24400	50.820	61	29	1	25	85	64	123	4.31e-13	61.6
MS.gene50673.t1	AT1G16510	43.284	67	37	1	25	91	54	119	1.84e-12	59.3
MS.gene50673.t1	AT3G09870	48.571	70	33	2	18	85	38	106	2.15e-12	58.5
MS.gene50673.t1	AT3G53250	40.000	65	35	1	24	88	51	111	2.15e-12	58.5
MS.gene50673.t1	AT4G12410	43.750	64	32	2	25	85	76	138	2.89e-12	58.9
MS.gene50673.t1	AT3G53250	40.000	65	35	1	24	88	82	142	3.34e-12	58.9
MS.gene50673.t1	AT1G79130	44.615	65	35	1	25	89	48	111	6.19e-12	57.8
MS.gene50673.t1	AT4G09530	38.667	75	43	2	19	90	22	96	8.23e-12	56.6
MS.gene50673.t1	AT4G22620	39.706	68	37	2	21	85	75	141	8.45e-12	57.8
MS.gene50673.t1	AT5G03310	45.070	71	32	3	24	88	38	107	1.53e-11	56.2
MS.gene50673.t1	AT1G76190	47.458	59	29	2	27	85	23	79	3.61e-11	55.5

Find 24 sgRNAs with CRISPR-Local

Find 24 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CCTTTAGAATAGTATGTAAA+TGG	0.294314	4.3:-33490919	None:intergenic
GGTTGGTTCAAATATGAGAT+AGG	0.385147	4.3:-33491040	None:intergenic
CATTTACATACTATTCTAAA+GGG	0.386578	4.3:+33490920	MS.gene50673:CDS
CCATTTACATACTATTCTAA+AGG	0.397138	4.3:+33490919	MS.gene50673:CDS
TACACTGCAACATAGCCCTT+TGG	0.504635	4.3:-33490986	None:intergenic
AGTCAATCTGAGGAAGAGTT+CGG	0.507563	4.3:+33491082	MS.gene50673:CDS
TCAAGCAAGAAGTTATATGT+TGG	0.510409	4.3:-33491156	None:intergenic
ACAAATCTTGAAACAATGGT+TGG	0.515696	4.3:-33491057	None:intergenic
CTCAACAAATCTTGAAACAA+TGG	0.526990	4.3:-33491061	None:intergenic
TTCGGATATGATCATCCAAT+GGG	0.535679	4.3:+33491100	MS.gene50673:CDS
GTTGGTTCAAATATGAGATA+GGG	0.542911	4.3:-33491039	None:intergenic
AAAATCTGTGGAAGTTCCAA+AGG	0.548759	4.3:+33490970	MS.gene50673:CDS
GGCTATGTTGCAGTGTATGT+TGG	0.553556	4.3:+33490992	MS.gene50673:CDS
TGGAAGACATCTTCGGAGCA+TGG	0.559524	4.3:-33491136	None:intergenic
GACATCTTCGGAGCATGGAA+TGG	0.559799	4.3:-33491131	None:intergenic
GTTCGGATATGATCATCCAA+TGG	0.566860	4.3:+33491099	MS.gene50673:CDS
TATATGTTGGAAGACATCTT+CGG	0.572640	4.3:-33491143	None:intergenic
GGAATGGTGAGGCCACCCAT+TGG	0.588290	4.3:-33491115	None:intergenic
ACAAGCATCATCAAAATCTG+TGG	0.600941	4.3:+33490958	MS.gene50673:CDS
AGATTTGTTGAGTCAATCTG+AGG	0.607255	4.3:+33491072	MS.gene50673:CDS
AAATCTGTGGAAGTTCCAAA+GGG	0.612114	4.3:+33490971	MS.gene50673:CDS
GGATATGATCATCCAATGGG+TGG	0.661502	4.3:+33491103	MS.gene50673:CDS
CTTCGGAGCATGGAATGGTG+AGG	0.671810	4.3:-33491126	None:intergenic
ATGTTGGAGAGAGACAAAAG+CGG	0.822067	4.3:+33491008	MS.gene50673:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	CATTTACATACTATTCTAAA+GGG	+	chr4.3:33490920-33490939	MS.gene50673:CDS	20.0%
!	CCATTTACATACTATTCTAA+AGG	+	chr4.3:33490919-33490938	MS.gene50673:CDS	25.0%
!!!	CCTTTAGAATAGTATGTAAA+TGG	-	chr4.3:33490922-33490941	None:intergenic	25.0%
	ACAAATCTTGAAACAATGGT+TGG	-	chr4.3:33491060-33491079	None:intergenic	30.0%
	CTCAACAAATCTTGAAACAA+TGG	-	chr4.3:33491064-33491083	None:intergenic	30.0%
	TATATGTTGGAAGACATCTT+CGG	-	chr4.3:33491146-33491165	None:intergenic	30.0%
	TCAAGCAAGAAGTTATATGT+TGG	-	chr4.3:33491159-33491178	None:intergenic	30.0%
!	GTTGGTTCAAATATGAGATA+GGG	-	chr4.3:33491042-33491061	None:intergenic	30.0%
	AAAATCTGTGGAAGTTCCAA+AGG	+	chr4.3:33490970-33490989	MS.gene50673:CDS	35.0%
	AAATCTGTGGAAGTTCCAAA+GGG	+	chr4.3:33490971-33490990	MS.gene50673:CDS	35.0%
	ACAAGCATCATCAAAATCTG+TGG	+	chr4.3:33490958-33490977	MS.gene50673:CDS	35.0%
	TTCGGATATGATCATCCAAT+GGG	+	chr4.3:33491100-33491119	MS.gene50673:CDS	35.0%
!	GGTTGGTTCAAATATGAGAT+AGG	-	chr4.3:33491043-33491062	None:intergenic	35.0%
!!	AGATTTGTTGAGTCAATCTG+AGG	+	chr4.3:33491072-33491091	MS.gene50673:CDS	35.0%
	AGTCAATCTGAGGAAGAGTT+CGG	+	chr4.3:33491082-33491101	MS.gene50673:CDS	40.0%
	ATGTTGGAGAGAGACAAAAG+CGG	+	chr4.3:33491008-33491027	MS.gene50673:CDS	40.0%
	GTTCGGATATGATCATCCAA+TGG	+	chr4.3:33491099-33491118	MS.gene50673:CDS	40.0%
	GGATATGATCATCCAATGGG+TGG	+	chr4.3:33491103-33491122	MS.gene50673:CDS	45.0%
	GGCTATGTTGCAGTGTATGT+TGG	+	chr4.3:33490992-33491011	MS.gene50673:CDS	45.0%
	TACACTGCAACATAGCCCTT+TGG	-	chr4.3:33490989-33491008	None:intergenic	45.0%
	GACATCTTCGGAGCATGGAA+TGG	-	chr4.3:33491134-33491153	None:intergenic	50.0%
	TGGAAGACATCTTCGGAGCA+TGG	-	chr4.3:33491139-33491158	None:intergenic	50.0%
	CTTCGGAGCATGGAATGGTG+AGG	-	chr4.3:33491129-33491148	None:intergenic	55.0%
	GGAATGGTGAGGCCACCCAT+TGG	-	chr4.3:33491118-33491137	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.3	gene	33490911	33491189	33490911	ID=MS.gene50673
chr4.3	mRNA	33490911	33491189	33490911	ID=MS.gene50673.t1;Parent=MS.gene50673
chr4.3	exon	33490911	33491189	33490911	ID=MS.gene50673.t1.exon1;Parent=MS.gene50673.t1
chr4.3	CDS	33490911	33491189	33490911	ID=cds.MS.gene50673.t1;Parent=MS.gene50673.t1

Gene Sequence	>MS.gene50673 ATGGGTTTCCATTTACATACTATTCTAAAGGGTTCAGTAACTGCTAGACAAGCATCATCAAAATCTGTGGAAGTTCCAAAGGGCTATGTTGCAGTGTATGTTGGAGAGAGACAAAAGCGGTTTGTGATCCCTATCTCATATTTGAACCAACCATTGTTTCAAGATTTGTTGAGTCAATCTGAGGAAGAGTTCGGATATGATCATCCAATGGGTGGCCTCACCATTCCATGCTCCGAAGATGTCTTCCAACATATAACTTCTTGCTTGAATGTGCTATGA
Protein sequence	>MS.gene50673.t1 MGFHLHTILKGSVTARQASSKSVEVPKGYVAVYVGERQKRFVIPISYLNQPLFQDLLSQSEEEFGYDHPMGGLTIPCSEDVFQHITSCLNVL