AlfalfaGEDB | MS.gene50770

M. sativa cultivar XinJiangDaYe / MS.gene50770

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene50770.t1	XP_003607158.1	96.7	91	3	0	1	91	1	91	6.40E-43	183

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene50770.t1	P33079	72.5	91	25	0	1	91	1	91	2.7e-34	145.6

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene50770.t1	B7FN73	96.7	91	3	0	1	91	1	91	4.6e-43	183.0

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene062943	MS.gene50770	PPI
MS.gene01358	MS.gene50770	PPI
MS.gene003608	MS.gene50770	PPI
MS.gene50770	MS.gene75315	PPI
MS.gene50770	MS.gene68164	PPI
MS.gene40326	MS.gene50770	PPI
MS.gene50770	MS.gene68759	PPI
MS.gene062952	MS.gene50770	PPI
MS.gene50676	MS.gene50770	PPI
MS.gene23370	MS.gene50770	PPI
MS.gene50766	MS.gene50770	PPI
MS.gene003594	MS.gene50770	PPI
MS.gene50665	MS.gene50770	PPI
MS.gene50770	MS.gene014223	PPI
MS.gene50677	MS.gene50770	PPI
MS.gene003625	MS.gene50770	PPI
MS.gene003586	MS.gene50770	PPI
MS.gene062988	MS.gene50770	PPI
MS.gene50770	MS.gene014669	PPI
MS.gene50770	MS.gene057808	PPI
MS.gene50763	MS.gene50770	PPI
MS.gene031200	MS.gene50770	PPI
MS.gene045365	MS.gene50770	PPI
MS.gene50770	MS.gene68163	PPI
MS.gene50659	MS.gene50770	PPI
MS.gene75316	MS.gene50770	PPI
MS.gene057790	MS.gene50770	PPI
MS.gene50770	MS.gene79889	PPI
MS.gene003624	MS.gene50770	PPI
MS.gene23371	MS.gene50770	PPI
MS.gene50770	MS.gene014222	PPI
MS.gene50770	MS.gene79888	PPI
MS.gene031199	MS.gene50770	PPI
MS.gene50770	MS.gene75678	PPI
MS.gene77529	MS.gene50770	PPI
MS.gene50770	MS.gene01764	PPI
MS.gene68761	MS.gene50770	PPI
MS.gene014667	MS.gene50770	PPI
MS.gene68760	MS.gene50770	PPI
MS.gene75676	MS.gene50770	PPI
MS.gene50770	MS.gene79885	PPI
MS.gene057778	MS.gene50770	PPI
MS.gene75673	MS.gene50770	PPI
MS.gene045366	MS.gene50770	PPI
MS.gene50770	MS.gene031198	PPI
MS.gene062963	MS.gene50770	PPI
MS.gene50770	MS.gene50764	PPI
MS.gene75674	MS.gene50770	PPI
MS.gene79890	MS.gene50770	PPI
MS.gene003615	MS.gene50770	PPI
MS.gene003602	MS.gene50770	PPI
MS.gene23372	MS.gene50770	PPI
MS.gene50770	MS.gene50654	PPI
MS.gene003627	MS.gene50770	PPI
MS.gene003577	MS.gene50770	PPI
MS.gene50770	MS.gene014670	PPI
MS.gene062984	MS.gene50770	PPI
MS.gene50770	MS.gene77524	PPI
MS.gene40327	MS.gene50770	PPI
MS.gene031201	MS.gene50770	PPI
MS.gene50770	MS.gene79887	PPI
MS.gene50770	MS.gene75314	PPI
MS.gene50770	MS.gene75679	PPI
MS.gene50770	MS.gene40325	PPI
MS.gene045362	MS.gene50770	PPI
MS.gene77523	MS.gene50770	PPI
MS.gene003587	MS.gene50770	PPI
MS.gene003590	MS.gene50770	PPI
MS.gene045368	MS.gene50770	PPI
MS.gene063112	MS.gene50770	PPI
MS.gene50770	MS.gene057797	PPI
MS.gene50770	MS.gene003614	PPI
MS.gene50770	MS.gene014668	PPI
MS.gene50770	MS.gene77528	PPI
MS.gene50770	MS.gene79886	PPI
MS.gene50770	MS.gene014671	PPI
MS.gene50770	MS.gene50765	PPI
MS.gene50770	MS.gene003596	PPI
MS.gene50770	MS.gene75672	PPI
MS.gene062973	MS.gene50770	PPI
MS.gene77526	MS.gene50770	PPI
MS.gene047517	MS.gene50770	PPI
MS.gene045360	MS.gene50770	PPI
MS.gene50770	MS.gene062974	PPI
MS.gene057818	MS.gene50770	PPI
MS.gene50770	MS.gene003583	PPI
MS.gene50770	MS.gene062951	PPI
MS.gene50770	MS.gene057801	PPI
MS.gene50770	MS.gene77527	PPI
MS.gene50770	MS.gene79891	PPI
MS.gene50770	MS.gene68162	PPI
MS.gene50770	MS.gene045367	PPI
MS.gene50770	MS.gene045364	PPI
MS.gene50687	MS.gene50770	PPI
MS.gene50770	MS.gene045363	PPI
MS.gene75677	MS.gene50770	PPI
MS.gene50770	MS.gene75675	PPI
MS.gene057795	MS.gene50770	PPI
MS.gene50770	MS.gene50652	PPI
MS.gene68165	MS.gene50770	PPI
MS.gene50770	MS.gene002380	PPI
MS.gene045361	MS.gene50770	PPI
MS.gene50675	MS.gene50770	PPI
MS.gene003591	MS.gene50770	PPI
MS.gene062979	MS.gene50770	PPI
MS.gene50770	MS.gene50684	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene50770.t1	MTR_4g072870	96.703	91	3	0	1	91	1	91	1.54e-62	184
MS.gene50770.t1	MTR_4g072240	84.615	91	14	0	1	91	1	91	1.96e-55	166
MS.gene50770.t1	MTR_4g072300	83.516	91	15	0	1	91	1	91	2.92e-54	163
MS.gene50770.t1	MTR_4g072220	84.615	91	14	0	1	91	1	91	4.62e-54	163
MS.gene50770.t1	MTR_4g072260	82.418	91	16	0	1	91	1	91	4.77e-54	163
MS.gene50770.t1	MTR_4g072890	82.418	91	16	0	1	91	1	91	1.18e-53	162
MS.gene50770.t1	MTR_4g072310	70.330	91	27	0	1	91	1	91	1.12e-46	144
MS.gene50770.t1	MTR_4g072370	71.429	91	23	1	1	91	1	88	1.36e-45	141
MS.gene50770.t1	MTR_3g110038	71.429	91	25	1	1	91	1	90	2.94e-45	140
MS.gene50770.t1	MTR_4g072330	72.527	91	22	1	1	91	1	88	4.03e-45	140
MS.gene50770.t1	MTR_3g084150	70.330	91	26	1	1	91	1	90	5.10e-45	140
MS.gene50770.t1	MTR_4g072740	73.626	91	18	1	1	91	1	85	6.93e-45	139
MS.gene50770.t1	MTR_4g072880	69.231	91	28	0	1	91	1	91	1.26e-44	139
MS.gene50770.t1	MTR_4g072500	69.231	91	27	1	1	91	1	90	2.01e-44	139
MS.gene50770.t1	MTR_3g084240	69.231	91	27	1	1	91	1	90	2.32e-44	138
MS.gene50770.t1	MTR_3g084180	69.231	91	27	1	1	91	1	90	3.26e-44	138
MS.gene50770.t1	MTR_3g084170	69.231	91	27	1	1	91	1	90	7.50e-44	137
MS.gene50770.t1	MTR_4g072830	71.111	90	23	1	1	90	1	87	1.56e-43	136
MS.gene50770.t1	MTR_8g461410	68.132	91	28	1	1	91	1	90	1.76e-43	136
MS.gene50770.t1	MTR_4g072250	69.231	91	27	1	1	91	1	90	3.41e-43	135
MS.gene50770.t1	MTR_4g072490	70.330	91	21	1	1	91	1	85	5.18e-43	135
MS.gene50770.t1	MTR_3g117630	68.182	88	28	0	4	91	3	90	5.46e-43	135
MS.gene50770.t1	MTR_4g072640	68.132	91	28	1	1	91	1	90	7.03e-43	135
MS.gene50770.t1	MTR_4g072530	67.033	91	29	1	1	91	1	90	7.81e-43	134
MS.gene50770.t1	MTR_4g072470	70.330	91	21	1	1	91	1	85	9.06e-43	134
MS.gene50770.t1	MTR_4g072580	68.132	91	23	1	1	91	1	85	1.01e-42	134
MS.gene50770.t1	MTR_4g072860	69.231	91	28	0	1	91	1	91	1.46e-42	134
MS.gene50770.t1	MTR_4g072480	69.231	91	27	1	1	91	1	90	1.85e-42	134
MS.gene50770.t1	MTR_4g072730	67.033	91	29	1	1	91	1	90	2.22e-42	133
MS.gene50770.t1	MTR_4g072230	68.132	91	27	1	1	91	1	89	2.33e-42	133
MS.gene50770.t1	MTR_4g072570	68.132	91	28	1	1	91	1	90	3.16e-42	133
MS.gene50770.t1	MTR_4g072630	68.132	91	24	1	1	91	1	86	7.50e-42	132
MS.gene50770.t1	MTR_4g050700	65.934	91	31	0	1	91	1	91	8.27e-42	132
MS.gene50770.t1	MTR_2g012410	65.934	91	31	0	1	91	1	91	8.27e-42	132
MS.gene50770.t1	MTR_3g110032	64.835	91	32	0	1	91	1	91	8.36e-42	132
MS.gene50770.t1	MTR_4g072270	65.934	91	31	0	1	91	1	91	9.64e-42	132
MS.gene50770.t1	MTR_4g072680	67.033	91	29	1	1	91	1	90	1.42e-41	131
MS.gene50770.t1	MTR_3g084220	65.934	91	30	1	1	91	1	90	1.89e-41	131
MS.gene50770.t1	MTR_4g072620	65.934	91	30	1	1	91	1	90	3.57e-41	130
MS.gene50770.t1	MTR_3g084250	67.033	91	29	1	1	91	1	90	1.33e-40	129
MS.gene50770.t1	MTR_3g110042	66.667	90	29	1	1	90	1	89	1.70e-40	129
MS.gene50770.t1	MTR_4g072460	65.934	91	30	1	1	91	1	90	3.34e-40	128
MS.gene50770.t1	MTR_3g084260	64.835	91	32	0	1	91	1	91	8.56e-40	127
MS.gene50770.t1	MTR_4g072820	68.132	91	23	2	1	91	1	85	1.27e-39	126
MS.gene50770.t1	MTR_4g072600	64.835	91	26	1	1	91	1	85	4.73e-39	125
MS.gene50770.t1	MTR_4g072610	67.033	91	23	2	1	91	1	84	6.98e-39	124
MS.gene50770.t1	MTR_4g072660	64.835	91	26	1	1	91	1	85	2.32e-38	123
MS.gene50770.t1	MTR_4g072850	67.391	92	29	1	1	91	1	92	2.34e-38	123
MS.gene50770.t1	MTR_4g072650	65.934	91	24	2	1	91	1	84	2.69e-38	123
MS.gene50770.t1	MTR_4g072540	65.934	91	26	1	1	91	1	86	3.70e-38	122
MS.gene50770.t1	MTR_3g084190	69.231	91	27	1	1	91	1	90	4.55e-37	120
MS.gene50770.t1	MTR_4g072380	64.835	91	27	1	1	91	1	86	7.03e-37	119
MS.gene50770.t1	MTR_4g072670	63.736	91	28	1	1	91	1	86	7.63e-37	119
MS.gene50770.t1	MTR_3g084160	68.132	91	28	1	1	91	1	90	8.41e-37	119
MS.gene50770.t1	MTR_4g072510	63.736	91	28	1	1	91	1	86	1.16e-36	119
MS.gene50770.t1	MTR_3g084210	65.934	91	30	1	1	91	1	90	2.09e-36	118
MS.gene50770.t1	MTR_4g072465	60.870	92	29	2	1	91	1	86	2.14e-36	118
MS.gene50770.t1	MTR_4g072280	73.333	75	20	0	1	75	1	75	3.25e-36	117
MS.gene50770.t1	MTR_4g072720	62.637	91	29	1	1	91	1	86	3.91e-36	117
MS.gene50770.t1	MTR_8g461420	67.033	91	29	1	1	91	1	90	5.31e-36	117
MS.gene50770.t1	MTR_5g008350	70.000	80	18	1	1	80	1	74	1.12e-35	116
MS.gene50770.t1	MTR_4g072590	76.119	67	16	0	25	91	19	85	1.20e-35	116
MS.gene50770.t1	MTR_3g084230	67.033	91	29	1	1	91	1	90	1.23e-35	116
MS.gene50770.t1	MTR_5g008360	68.919	74	23	0	18	91	8	81	2.50e-35	115
MS.gene50770.t1	MTR_4g072940	65.556	90	30	1	3	91	33	122	2.73e-35	116
MS.gene50770.t1	MTR_5g008370	76.119	67	16	0	25	91	24	90	3.08e-34	114
MS.gene50770.t1	MTR_3g110045	68.675	83	26	0	9	91	67	149	4.21e-34	114
MS.gene50770.t1	MTR_4g072690	68.132	91	23	1	1	91	1	85	8.19e-34	111
MS.gene50770.t1	MTR_4g072550	69.014	71	22	0	21	91	31	101	1.40e-32	109
MS.gene50770.t1	MTR_3g084200	67.123	73	23	1	1	73	1	72	1.99e-32	108
MS.gene50770.t1	MTR_4g072450	65.934	91	25	1	1	91	1	85	4.15e-32	107
MS.gene50770.t1	MTR_4g072980	54.348	92	40	2	1	90	1	92	3.71e-31	105
MS.gene50770.t1	MTR_4g072910	55.422	83	37	0	9	91	18	100	6.76e-31	105
MS.gene50770.t1	MTR_4g072770	68.182	66	21	0	26	91	15	80	7.46e-31	104
MS.gene50770.t1	MTR_3g117640	67.164	67	21	1	26	91	34	100	5.40e-30	102
MS.gene50770.t1	MTR_4g072290	54.945	91	27	1	1	91	1	77	6.25e-30	102
MS.gene50770.t1	MTR_4g072560	49.485	97	42	3	1	90	1	97	2.34e-29	100
MS.gene50770.t1	MTR_4g072750	65.333	75	23	2	1	73	1	74	4.00e-29	100
MS.gene50770.t1	MTR_4g072930	54.118	85	35	1	11	91	26	110	6.97e-29	100
MS.gene50770.t1	MTR_3g113310	50.000	92	39	3	5	90	15	105	2.53e-25	90.9
MS.gene50770.t1	MTR_3g110035	64.062	64	23	0	28	91	73	136	3.76e-25	91.7
MS.gene50770.t1	MTR_3g117610	48.837	86	42	2	4	88	22	106	4.91e-24	87.8
MS.gene50770.t1	MTR_4g072190	48.837	86	41	2	5	90	17	99	1.57e-23	86.3
MS.gene50770.t1	MTR_8g076040	52.273	88	37	3	5	88	16	102	5.99e-23	85.1
MS.gene50770.t1	MTR_5g021820	50.000	90	40	4	5	90	15	103	1.38e-22	84.0
MS.gene50770.t1	MTR_6g077850	50.746	67	33	0	25	91	33	99	1.01e-21	81.6
MS.gene50770.t1	MTR_8g461400	47.253	91	21	2	1	91	1	64	1.17e-21	80.5
MS.gene50770.t1	MTR_4g072840	46.154	91	18	3	1	91	1	60	3.78e-18	71.6
MS.gene50770.t1	MTR_4g005310	53.030	66	30	1	19	83	55	120	9.82e-18	73.2
MS.gene50770.t1	MTR_4g124750	45.349	86	45	2	4	88	46	130	2.57e-17	72.0
MS.gene50770.t1	MTR_2g043960	46.914	81	41	2	4	83	53	132	2.79e-17	72.0
MS.gene50770.t1	MTR_0388s0020	47.297	74	34	3	8	78	58	129	1.41e-16	70.1
MS.gene50770.t1	MTR_4g025830	46.479	71	34	2	23	90	76	145	8.68e-16	68.2
MS.gene50770.t1	MTR_4g072160	51.562	64	30	1	23	86	34	96	8.75e-16	67.8
MS.gene50770.t1	MTR_1g009150	47.761	67	34	1	17	83	62	127	3.28e-15	67.0
MS.gene50770.t1	MTR_1g094750	40.000	80	43	2	11	86	31	109	6.78e-15	64.7
MS.gene50770.t1	MTR_1g024085	54.098	61	26	2	25	85	36	94	1.02e-14	65.1
MS.gene50770.t1	MTR_3g092220	45.455	66	33	2	20	83	27	91	2.18e-14	63.5
MS.gene50770.t1	MTR_7g118010	50.000	60	27	2	26	83	23	81	2.38e-14	63.2
MS.gene50770.t1	MTR_3g109160	46.053	76	39	2	9	83	51	125	5.91e-14	63.5
MS.gene50770.t1	MTR_1g061570	51.786	56	26	1	25	80	18	72	8.34e-14	62.4
MS.gene50770.t1	MTR_4g005320	48.276	58	29	1	26	83	70	126	1.39e-13	62.4
MS.gene50770.t1	MTR_7g405740	45.902	61	32	1	26	86	67	126	1.40e-13	62.4
MS.gene50770.t1	MTR_8g026730	48.333	60	28	2	26	83	27	85	2.03e-13	60.8
MS.gene50770.t1	MTR_7g104950	39.474	76	40	2	15	90	44	113	4.03e-13	60.5
MS.gene50770.t1	MTR_8g461210	47.458	59	30	1	25	83	34	91	4.47e-13	60.1
MS.gene50770.t1	MTR_1g059770	41.538	65	37	1	26	90	49	112	4.69e-13	60.5
MS.gene50770.t1	MTR_3g097120	41.026	78	37	2	21	90	4	80	1.11e-12	58.9
MS.gene50770.t1	MTR_2g095430	43.939	66	32	2	25	86	44	108	1.17e-12	59.3
MS.gene50770.t1	MTR_8g101520	47.692	65	33	1	27	91	51	114	1.40e-12	59.7
MS.gene50770.t1	MTR_2g066830	47.170	53	27	1	26	78	58	109	1.57e-12	59.3
MS.gene50770.t1	MTR_1g063950	40.323	62	36	1	25	86	47	107	1.84e-12	58.5
MS.gene50770.t1	MTR_3g098970	35.821	67	42	1	25	91	52	117	2.00e-12	59.3
MS.gene50770.t1	MTR_7g101740	42.188	64	36	1	25	88	39	101	2.66e-12	58.2
MS.gene50770.t1	MTR_3g105900	66.667	36	12	0	25	60	1171	1206	6.57e-12	60.1
MS.gene50770.t1	MTR_7g104940	37.662	77	42	2	14	90	43	113	8.27e-12	57.4
MS.gene50770.t1	MTR_8g096440	38.961	77	44	2	9	85	30	103	7.68e-11	55.1
MS.gene50770.t1	MTR_8g096470	43.333	60	33	1	27	86	47	105	9.13e-11	53.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene50770.t1	AT4G38840	62.353	85	31	1	8	91	15	99	6.23e-34	112
MS.gene50770.t1	AT2G21210	51.579	95	42	2	1	91	1	95	2.35e-32	108
MS.gene50770.t1	AT2G21210	51.579	95	42	2	1	91	68	162	1.37e-31	108
MS.gene50770.t1	AT5G18080	54.348	92	39	2	1	91	1	90	1.67e-31	106
MS.gene50770.t1	AT4G38825	61.333	75	28	1	18	91	15	89	1.96e-31	105
MS.gene50770.t1	AT5G18060	66.667	66	21	1	27	91	25	90	1.05e-30	104
MS.gene50770.t1	AT5G18050	64.179	67	23	1	26	91	24	90	3.02e-30	103
MS.gene50770.t1	AT5G18020	58.108	74	30	1	17	89	15	88	3.86e-30	102
MS.gene50770.t1	AT5G18030	58.442	77	31	1	16	91	12	88	6.62e-30	102
MS.gene50770.t1	AT5G18010	56.579	76	32	1	17	91	15	90	1.59e-29	101
MS.gene50770.t1	AT2G21200	61.111	72	27	1	20	90	15	86	2.57e-29	100
MS.gene50770.t1	AT4G34770	60.976	82	27	2	12	91	24	102	3.88e-29	100
MS.gene50770.t1	AT4G38850	62.319	69	23	1	26	91	21	89	5.40e-29	99.8
MS.gene50770.t1	AT3G03840	57.333	75	30	1	19	91	20	94	5.65e-28	97.4
MS.gene50770.t1	AT3G03820	52.688	93	38	2	2	91	6	95	7.16e-28	97.1
MS.gene50770.t1	AT4G34800	51.685	89	35	2	1	86	1	84	1.13e-27	96.7
MS.gene50770.t1	AT3G03850	62.687	67	23	1	27	91	26	92	4.47e-27	95.1
MS.gene50770.t1	AT4G34810	59.155	71	24	2	25	90	47	117	1.66e-26	94.4
MS.gene50770.t1	AT4G13790	46.667	90	40	2	3	90	8	91	5.51e-26	92.4
MS.gene50770.t1	AT3G03830	58.571	70	26	1	25	91	23	92	6.21e-26	92.0
MS.gene50770.t1	AT4G34790	60.000	65	24	1	26	88	39	103	1.93e-24	89.0
MS.gene50770.t1	AT4G38860	47.253	91	44	2	5	91	15	105	2.08e-24	88.6
MS.gene50770.t1	AT1G75580	51.064	94	37	3	5	90	15	107	2.09e-24	89.0
MS.gene50770.t1	AT4G34780	51.765	85	38	2	9	90	11	95	2.28e-24	88.6
MS.gene50770.t1	AT2G21220	46.667	90	43	3	5	90	15	103	8.11e-23	84.7
MS.gene50770.t1	AT1G19830	47.959	98	38	3	5	90	15	111	1.19e-22	84.7
MS.gene50770.t1	AT4G34760	46.739	92	42	3	5	90	16	106	2.37e-22	83.6
MS.gene50770.t1	AT4G36110	48.837	86	41	2	5	88	17	101	9.46e-22	82.0
MS.gene50770.t1	AT2G16580	45.161	93	43	2	5	90	16	107	1.24e-20	79.3
MS.gene50770.t1	AT2G18010	43.617	94	42	2	5	88	17	109	2.05e-19	76.3
MS.gene50770.t1	AT5G66260	47.191	89	44	3	5	91	11	98	1.94e-18	73.6
MS.gene50770.t1	AT3G43120	54.237	59	26	1	25	83	78	135	1.28e-17	72.8
MS.gene50770.t1	AT3G20220	52.308	65	29	2	26	89	47	110	3.11e-17	70.9
MS.gene50770.t1	AT5G20810	51.515	66	31	1	18	83	71	135	6.40e-17	71.2
MS.gene50770.t1	AT3G51200	52.381	63	28	2	25	86	38	99	1.27e-16	68.9
MS.gene50770.t1	AT5G20810	51.515	66	31	1	18	83	71	135	1.39e-16	70.9
MS.gene50770.t1	AT1G75590	48.649	74	33	2	12	85	32	100	1.55e-15	67.4
MS.gene50770.t1	AT5G10990	50.820	61	29	1	25	85	40	99	1.34e-14	64.7
MS.gene50770.t1	AT1G19840	52.459	61	28	1	25	85	40	99	2.58e-14	64.3
MS.gene50770.t1	AT4G34750	37.079	89	52	2	3	88	11	98	8.72e-14	62.8
MS.gene50770.t1	AT4G34750	37.079	89	52	2	3	88	11	98	8.72e-14	62.8
MS.gene50770.t1	AT3G60690	44.118	68	34	2	26	90	88	154	1.54e-13	62.8
MS.gene50770.t1	AT2G45210	39.726	73	40	2	21	90	74	145	1.81e-13	62.4
MS.gene50770.t1	AT3G12830	46.575	73	31	3	6	78	37	101	2.43e-13	61.2
MS.gene50770.t1	AT2G37030	41.270	63	36	1	25	87	48	109	3.63e-13	60.5
MS.gene50770.t1	AT4G12410	45.588	68	33	2	26	90	76	142	3.92e-13	61.2
MS.gene50770.t1	AT4G09530	43.750	64	33	2	26	86	28	91	9.31e-13	58.9
MS.gene50770.t1	AT2G46690	43.284	67	34	2	20	83	18	83	1.54e-12	58.9
MS.gene50770.t1	AT3G61900	41.429	70	37	2	25	91	29	97	1.95e-12	58.9
MS.gene50770.t1	AT4G00880	50.820	61	27	2	25	83	27	86	2.42e-12	58.5
MS.gene50770.t1	AT3G53250	39.683	63	34	1	25	87	51	109	4.82e-12	57.8
MS.gene50770.t1	AT4G31320	50.000	60	28	2	26	85	80	137	5.06e-12	58.9
MS.gene50770.t1	AT1G56150	41.176	68	39	1	16	83	28	94	5.97e-12	57.0
MS.gene50770.t1	AT3G53250	39.683	63	34	1	25	87	82	140	9.66e-12	57.8
MS.gene50770.t1	AT3G03847	52.830	53	23	2	34	86	80	130	1.40e-11	56.6
MS.gene50770.t1	AT4G22620	41.176	68	36	2	26	90	79	145	1.66e-11	57.0
MS.gene50770.t1	AT2G24400	48.276	58	29	1	26	83	64	120	2.09e-11	57.0
MS.gene50770.t1	AT5G53590	42.188	64	31	2	25	83	45	107	4.99e-11	55.5
MS.gene50770.t1	AT3G09870	47.368	57	27	2	25	79	44	99	8.68e-11	54.3

Find 18 sgRNAs with CRISPR-Local

Find 22 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTTGCTAGATCCTTGAGTTT+TGG	0.256049	4.1:+30717961	None:intergenic
AATCAAACAGAAGAAGAATT+TGG	0.263153	4.1:-30717830	MS.gene50770:CDS
TAGACTGCGAAATAGCCTTT+TGG	0.378087	4.1:+30717926	None:intergenic
GGTTGGTTCAAGTATGATAC+TGG	0.408482	4.1:+30717872	None:intergenic
GGCTATTTCGCAGTCTATGT+TGG	0.482476	4.1:-30717920	MS.gene50770:CDS
GTATAGCCAGTATTATCAAA+AGG	0.485566	4.1:-30717994	MS.gene50770:CDS
TTTGGTTATGATCATCCAAT+GGG	0.517036	4.1:-30717812	MS.gene50770:CDS
TATAGCCAGTATTATCAAAA+GGG	0.519957	4.1:-30717993	MS.gene50770:CDS
ATTTGGTTATGATCATCCAA+TGG	0.535398	4.1:-30717813	MS.gene50770:CDS
AAGGGATTTGAAGTCCCAAA+AGG	0.553717	4.1:-30717941	MS.gene50770:CDS
CAAAACTCAAGGATCTAGCA+AGG	0.560233	4.1:-30717960	MS.gene50770:CDS
TTTAGTAATTCTTGAAACGA+TGG	0.573548	4.1:+30717851	None:intergenic
GTAATTCTTGAAACGATGGT+TGG	0.574495	4.1:+30717855	None:intergenic
AAGAAAGCATCTTCGCTGCA+AGG	0.576323	4.1:+30717776	None:intergenic
GGAATTGTGAGACCACCCAT+TGG	0.598739	4.1:+30717797	None:intergenic
GGTTATGATCATCCAATGGG+TGG	0.620968	4.1:-30717809	MS.gene50770:CDS
AAAACTCAAGGATCTAGCAA+GGG	0.632437	4.1:-30717959	MS.gene50770:CDS
ATGTTGGAGATAGAATGAGA+CGG	0.719329	4.1:-30717904	MS.gene50770:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	AATCAAACAGAAGAAGAATT+TGG	-	chr4.1:30717925-30717944	MS.gene50770:CDS	25.0%
!	TATAGCCAGTATTATCAAAA+GGG	-	chr4.1:30717762-30717781	MS.gene50770:CDS	25.0%
!	TTTAGTAATTCTTGAAACGA+TGG	+	chr4.1:30717907-30717926	None:intergenic	25.0%
!!!	TTTTGATAATACTGGCTATA+CGG	+	chr4.1:30717762-30717781	None:intergenic	25.0%
	ATTTGGTTATGATCATCCAA+TGG	-	chr4.1:30717942-30717961	MS.gene50770:CDS	30.0%
	GTATAGCCAGTATTATCAAA+AGG	-	chr4.1:30717761-30717780	MS.gene50770:CDS	30.0%
	TTTGGTTATGATCATCCAAT+GGG	-	chr4.1:30717943-30717962	MS.gene50770:CDS	30.0%
	AAAACTCAAGGATCTAGCAA+GGG	-	chr4.1:30717796-30717815	MS.gene50770:CDS	35.0%
	ATGTTGGAGATAGAATGAGA+CGG	-	chr4.1:30717851-30717870	MS.gene50770:CDS	35.0%
	GTAATTCTTGAAACGATGGT+TGG	+	chr4.1:30717903-30717922	None:intergenic	35.0%
!	GCATCATTTTCCAAAACTCA+AGG	-	chr4.1:30717784-30717803	MS.gene50770:CDS	35.0%
!!	TGATGCCCTTTTGATAATAC+TGG	+	chr4.1:30717770-30717789	None:intergenic	35.0%
	CAAAACTCAAGGATCTAGCA+AGG	-	chr4.1:30717795-30717814	MS.gene50770:CDS	40.0%
!	AAGGGATTTGAAGTCCCAAA+AGG	-	chr4.1:30717814-30717833	MS.gene50770:CDS	40.0%
!	AGACTGCGAAATAGCCTTTT+GGG	+	chr4.1:30717831-30717850	None:intergenic	40.0%
!	CTTGCTAGATCCTTGAGTTT+TGG	+	chr4.1:30717797-30717816	None:intergenic	40.0%
!	GGTTGGTTCAAGTATGATAC+TGG	+	chr4.1:30717886-30717905	None:intergenic	40.0%
!	TAGACTGCGAAATAGCCTTT+TGG	+	chr4.1:30717832-30717851	None:intergenic	40.0%
	GGTTATGATCATCCAATGGG+TGG	-	chr4.1:30717946-30717965	MS.gene50770:CDS	45.0%
!	GGCTATTTCGCAGTCTATGT+TGG	-	chr4.1:30717835-30717854	MS.gene50770:CDS	45.0%
!!	AAGAAAGCATCTTCGCTGCA+AGG	+	chr4.1:30717982-30718001	None:intergenic	45.0%
	GGAATTGTGAGACCACCCAT+TGG	+	chr4.1:30717961-30717980	None:intergenic	50.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.1	gene	30717751	30718026	30717751	ID=MS.gene50770
chr4.1	mRNA	30717751	30718026	30717751	ID=MS.gene50770.t1;Parent=MS.gene50770
chr4.1	exon	30717751	30718026	30717751	ID=MS.gene50770.t1.exon1;Parent=MS.gene50770.t1
chr4.1	CDS	30717751	30718026	30717751	ID=cds.MS.gene50770.t1;Parent=MS.gene50770.t1

Gene Sequence	>MS.gene50770 ATGGGTTTCCGTATAGCCAGTATTATCAAAAGGGCATCATTTTCCAAAACTCAAGGATCTAGCAAGGGATTTGAAGTCCCAAAAGGCTATTTCGCAGTCTATGTTGGAGATAGAATGAGACGGTTCGTGATTCCAGTATCATACTTGAACCAACCATCGTTTCAAGAATTACTAAATCAAACAGAAGAAGAATTTGGTTATGATCATCCAATGGGTGGTCTCACAATTCCTTGCAGCGAAGATGCTTTCTTTGAACTCACTTCTCGCTTGAATTGA
Protein sequence	>MS.gene50770.t1 MGFRIASIIKRASFSKTQGSSKGFEVPKGYFAVYVGDRMRRFVIPVSYLNQPSFQELLNQTEEEFGYDHPMGGLTIPCSEDAFFELTSRLN