Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54686.t1 | XP_024642404.1 | 94.1 | 457 | 16 | 1 | 1 | 446 | 1 | 457 | 9.00E-215 | 756.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54686.t1 | P9WLH5 | 33.8 | 139 | 83 | 2 | 308 | 445 | 1 | 131 | 7.2e-11 | 70.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54686.t1 | A0A396HB38 | 94.1 | 457 | 16 | 1 | 1 | 446 | 1 | 457 | 6.5e-215 | 756.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene54686.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene54686 | 0.82671 | 2.34E-54 | -1.69E-46 |
| MS.gene049159 | MS.gene54686 | 0.825076 | 5.71E-54 | -1.69E-46 |
| MS.gene049254 | MS.gene54686 | 0.838234 | 3.25E-57 | -1.69E-46 |
| MS.gene049272 | MS.gene54686 | 0.8174 | 3.36E-52 | -1.69E-46 |
| MS.gene049435 | MS.gene54686 | 0.807474 | 4.97E-50 | -1.69E-46 |
| MS.gene049452 | MS.gene54686 | 0.801069 | 1.07E-48 | -1.69E-46 |
| MS.gene049501 | MS.gene54686 | 0.821108 | 4.81E-53 | -1.69E-46 |
| MS.gene049567 | MS.gene54686 | 0.802643 | 5.09E-49 | -1.69E-46 |
| MS.gene049850 | MS.gene54686 | 0.839153 | 1.88E-57 | -1.69E-46 |
| MS.gene050026 | MS.gene54686 | 0.819377 | 1.20E-52 | -1.69E-46 |
| MS.gene050156 | MS.gene54686 | 0.85298 | 3.23E-61 | -1.69E-46 |
| MS.gene050355 | MS.gene54686 | 0.831218 | 1.89E-55 | -1.69E-46 |
| MS.gene050442 | MS.gene54686 | 0.821073 | 4.90E-53 | -1.69E-46 |
| MS.gene05045 | MS.gene54686 | 0.81783 | 2.69E-52 | -1.69E-46 |
| MS.gene050559 | MS.gene54686 | 0.803556 | 3.29E-49 | -1.69E-46 |
| MS.gene050561 | MS.gene54686 | 0.80882 | 2.57E-50 | -1.69E-46 |
| MS.gene050719 | MS.gene54686 | 0.823684 | 1.21E-53 | -1.69E-46 |
| MS.gene050721 | MS.gene54686 | 0.820507 | 6.61E-53 | -1.69E-46 |
| MS.gene050724 | MS.gene54686 | 0.816913 | 4.33E-52 | -1.69E-46 |
| MS.gene050750 | MS.gene54686 | 0.801094 | 1.06E-48 | -1.69E-46 |
| MS.gene050826 | MS.gene54686 | 0.807124 | 5.89E-50 | -1.69E-46 |
| MS.gene050844 | MS.gene54686 | 0.828078 | 1.10E-54 | -1.69E-46 |
| MS.gene051147 | MS.gene54686 | 0.800591 | 1.34E-48 | -1.69E-46 |
| MS.gene051247 | MS.gene54686 | 0.834442 | 2.99E-56 | -1.69E-46 |
| MS.gene051719 | MS.gene54686 | 0.83427 | 3.30E-56 | -1.69E-46 |
| MS.gene051720 | MS.gene54686 | 0.820634 | 6.18E-53 | -1.69E-46 |
| MS.gene051744 | MS.gene54686 | 0.835122 | 2.02E-56 | -1.69E-46 |
| MS.gene051957 | MS.gene54686 | 0.844377 | 7.85E-59 | -1.69E-46 |
| MS.gene052042 | MS.gene54686 | 0.803339 | 3.65E-49 | -1.69E-46 |
| MS.gene052516 | MS.gene54686 | 0.851295 | 9.74E-61 | -1.69E-46 |
| MS.gene052519 | MS.gene54686 | 0.850123 | 2.08E-60 | -1.69E-46 |
| MS.gene052582 | MS.gene54686 | 0.817999 | 2.46E-52 | -1.69E-46 |
| MS.gene052584 | MS.gene54686 | 0.821882 | 3.19E-53 | -1.69E-46 |
| MS.gene052611 | MS.gene54686 | 0.820853 | 5.51E-53 | -1.69E-46 |
| MS.gene052773 | MS.gene54686 | 0.853258 | 2.69E-61 | -1.69E-46 |
| MS.gene052863 | MS.gene54686 | 0.839842 | 1.24E-57 | -1.69E-46 |
| MS.gene052867 | MS.gene54686 | 0.808014 | 3.81E-50 | -1.69E-46 |
| MS.gene052896 | MS.gene54686 | 0.817237 | 3.66E-52 | -1.69E-46 |
| MS.gene053006 | MS.gene54686 | 0.801689 | 8.00E-49 | -1.69E-46 |
| MS.gene053008 | MS.gene54686 | 0.842292 | 2.83E-58 | -1.69E-46 |
| MS.gene053166 | MS.gene54686 | 0.822645 | 2.12E-53 | -1.69E-46 |
| MS.gene053221 | MS.gene54686 | 0.801308 | 9.57E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene54686 | 0.830457 | 2.91E-55 | -1.69E-46 |
| MS.gene053883 | MS.gene54686 | 0.816997 | 4.14E-52 | -1.69E-46 |
| MS.gene053900 | MS.gene54686 | 0.812599 | 3.91E-51 | -1.69E-46 |
| MS.gene053966 | MS.gene54686 | 0.805615 | 1.23E-49 | -1.69E-46 |
| MS.gene053998 | MS.gene54686 | 0.825898 | 3.65E-54 | -1.69E-46 |
| MS.gene05414 | MS.gene54686 | 0.812075 | 5.09E-51 | -1.69E-46 |
| MS.gene05415 | MS.gene54686 | 0.858153 | 1.00E-62 | -1.69E-46 |
| MS.gene054236 | MS.gene54686 | 0.808191 | 3.50E-50 | -1.69E-46 |
| MS.gene05423 | MS.gene54686 | 0.815865 | 7.42E-52 | -1.69E-46 |
| MS.gene054467 | MS.gene54686 | 0.813033 | 3.14E-51 | -1.69E-46 |
| MS.gene054472 | MS.gene54686 | 0.809681 | 1.68E-50 | -1.69E-46 |
| MS.gene054559 | MS.gene54686 | 0.802083 | 6.64E-49 | -1.69E-46 |
| MS.gene054582 | MS.gene54686 | 0.801602 | 8.33E-49 | -1.69E-46 |
| MS.gene054651 | MS.gene54686 | 0.834339 | 3.17E-56 | -1.69E-46 |
| MS.gene054775 | MS.gene54686 | 0.814031 | 1.89E-51 | -1.69E-46 |
| MS.gene054991 | MS.gene54686 | 0.810832 | 9.47E-51 | -1.69E-46 |
| MS.gene055227 | MS.gene54686 | 0.809515 | 1.82E-50 | -1.69E-46 |
| MS.gene055465 | MS.gene54686 | 0.814532 | 1.47E-51 | -1.69E-46 |
| MS.gene055466 | MS.gene54686 | 0.83354 | 5.03E-56 | -1.69E-46 |
| MS.gene055468 | MS.gene54686 | 0.805552 | 1.26E-49 | -1.69E-46 |
| MS.gene055586 | MS.gene54686 | 0.810007 | 1.43E-50 | -1.69E-46 |
| MS.gene055589 | MS.gene54686 | 0.832802 | 7.68E-56 | -1.69E-46 |
| MS.gene055778 | MS.gene54686 | 0.82386 | 1.10E-53 | -1.69E-46 |
| MS.gene055818 | MS.gene54686 | 0.891266 | 4.65E-74 | -1.69E-46 |
| MS.gene055841 | MS.gene54686 | 0.804615 | 1.98E-49 | -1.69E-46 |
| MS.gene055926 | MS.gene54686 | 0.816733 | 4.75E-52 | -1.69E-46 |
| MS.gene05604 | MS.gene54686 | 0.826583 | 2.51E-54 | -1.69E-46 |
| MS.gene056162 | MS.gene54686 | 0.822901 | 1.85E-53 | -1.69E-46 |
| MS.gene056174 | MS.gene54686 | 0.844295 | 8.26E-59 | -1.69E-46 |
| MS.gene056215 | MS.gene54686 | 0.807907 | 4.02E-50 | -1.69E-46 |
| MS.gene056366 | MS.gene54686 | 0.830662 | 2.59E-55 | -1.69E-46 |
| MS.gene056498 | MS.gene54686 | 0.805433 | 1.34E-49 | -1.69E-46 |
| MS.gene056595 | MS.gene54686 | 0.832282 | 1.03E-55 | -1.69E-46 |
| MS.gene056776 | MS.gene54686 | 0.804978 | 1.67E-49 | -1.69E-46 |
| MS.gene05686 | MS.gene54686 | 0.800264 | 1.56E-48 | -1.69E-46 |
| MS.gene05690 | MS.gene54686 | 0.821953 | 3.07E-53 | -1.69E-46 |
| MS.gene057026 | MS.gene54686 | 0.833723 | 4.53E-56 | -1.69E-46 |
| MS.gene057027 | MS.gene54686 | 0.812101 | 5.02E-51 | -1.69E-46 |
| MS.gene057060 | MS.gene54686 | 0.804092 | 2.55E-49 | -1.69E-46 |
| MS.gene057208 | MS.gene54686 | 0.80379 | 2.95E-49 | -1.69E-46 |
| MS.gene057314 | MS.gene54686 | 0.801299 | 9.61E-49 | -1.69E-46 |
| MS.gene057414 | MS.gene54686 | 0.825579 | 4.34E-54 | -1.69E-46 |
| MS.gene057444 | MS.gene54686 | 0.854536 | 1.15E-61 | -1.69E-46 |
| MS.gene057598 | MS.gene54686 | 0.825089 | 5.67E-54 | -1.69E-46 |
| MS.gene057693 | MS.gene54686 | 0.80857 | 2.90E-50 | -1.69E-46 |
| MS.gene057915 | MS.gene54686 | 0.831324 | 1.78E-55 | -1.69E-46 |
| MS.gene058009 | MS.gene54686 | 0.81075 | 9.87E-51 | -1.69E-46 |
| MS.gene058010 | MS.gene54686 | 0.820387 | 7.05E-53 | -1.69E-46 |
| MS.gene058037 | MS.gene54686 | 0.840742 | 7.24E-58 | -1.69E-46 |
| MS.gene058625 | MS.gene54686 | 0.847437 | 1.16E-59 | -1.69E-46 |
| MS.gene058636 | MS.gene54686 | 0.801379 | 9.26E-49 | -1.69E-46 |
| MS.gene058829 | MS.gene54686 | 0.825857 | 3.73E-54 | -1.69E-46 |
| MS.gene058979 | MS.gene54686 | 0.834361 | 3.13E-56 | -1.69E-46 |
| MS.gene05897 | MS.gene54686 | 0.806611 | 7.56E-50 | -1.69E-46 |
| MS.gene059015 | MS.gene54686 | 0.815411 | 9.37E-52 | -1.69E-46 |
| MS.gene059272 | MS.gene54686 | 0.810064 | 1.39E-50 | -1.69E-46 |
| MS.gene059283 | MS.gene54686 | 0.824869 | 6.39E-54 | -1.69E-46 |
| MS.gene059570 | MS.gene54686 | 0.80741 | 5.13E-50 | -1.69E-46 |
| MS.gene059625 | MS.gene54686 | 0.820214 | 7.72E-53 | -1.69E-46 |
| MS.gene059842 | MS.gene54686 | 0.811161 | 8.04E-51 | -1.69E-46 |
| MS.gene060011 | MS.gene54686 | 0.80064 | 1.31E-48 | -1.69E-46 |
| MS.gene060167 | MS.gene54686 | 0.816435 | 5.54E-52 | -1.69E-46 |
| MS.gene060322 | MS.gene54686 | 0.855802 | 4.94E-62 | -1.69E-46 |
| MS.gene060521 | MS.gene54686 | 0.836631 | 8.35E-57 | -1.69E-46 |
| MS.gene06052 | MS.gene54686 | 0.826174 | 3.13E-54 | -1.69E-46 |
| MS.gene060572 | MS.gene54686 | 0.844138 | 9.10E-59 | -1.69E-46 |
| MS.gene060803 | MS.gene54686 | 0.818158 | 2.27E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54686.t1 | MTR_0856s0010 | 60.479 | 167 | 54 | 4 | 36 | 199 | 2 | 159 | 1.20e-61 | 197 |
| MS.gene54686.t1 | MTR_7g115320 | 44.444 | 72 | 37 | 1 | 161 | 232 | 6 | 74 | 2.15e-13 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54686.t1 | AT3G01410 | 47.222 | 144 | 68 | 1 | 303 | 446 | 148 | 283 | 3.23e-31 | 122 |
| MS.gene54686.t1 | AT3G01410 | 47.222 | 144 | 68 | 1 | 303 | 446 | 148 | 283 | 3.23e-31 | 122 |
| MS.gene54686.t1 | AT5G51080 | 46.043 | 139 | 67 | 1 | 309 | 447 | 122 | 252 | 1.72e-27 | 110 |
| MS.gene54686.t1 | AT5G51080 | 46.043 | 139 | 67 | 1 | 309 | 447 | 185 | 315 | 6.49e-27 | 110 |
| MS.gene54686.t1 | AT5G51080 | 46.043 | 139 | 67 | 1 | 309 | 447 | 185 | 315 | 6.49e-27 | 110 |
| MS.gene54686.t1 | AT1G24090 | 44.667 | 150 | 73 | 2 | 299 | 446 | 204 | 345 | 1.13e-25 | 107 |
Find 89 sgRNAs with CRISPR-Local
Find 223 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGGATAGTTCAAAGAATT+TGG | 0.188161 | 6.1:+3760586 | None:intergenic |
| TGGAGAGTATGCTTTGAAAA+AGG | 0.195927 | 6.1:+3760862 | MS.gene54686:CDS |
| CCCGCATCTCGTTTGCAAAA+TGG | 0.205635 | 6.1:-3761250 | None:intergenic |
| TATGTTCCTTTGTAGCTCTA+TGG | 0.232618 | 6.1:+3763013 | MS.gene54686:intron |
| TTGAACAATCTTCCCTTTGC+AGG | 0.266353 | 6.1:-3761106 | None:intergenic |
| GAGTATCGGGCTTTACTCTT+AGG | 0.286694 | 6.1:+3763076 | MS.gene54686:CDS |
| GAAATTATGTGCTGAGGCTT+TGG | 0.322454 | 6.1:+3763565 | MS.gene54686:CDS |
| CTCCTGGATCATCAGTGCTT+TGG | 0.328920 | 6.1:-3761168 | None:intergenic |
| TCCGCATCCAACACATTTCC+AGG | 0.335217 | 6.1:+3763612 | MS.gene54686:CDS |
| AACATTTCTCACCTGTTGTT+TGG | 0.340587 | 6.1:-3761705 | None:intergenic |
| CTCGGAACTTGTTATCAATC+AGG | 0.350472 | 6.1:+3763150 | MS.gene54686:CDS |
| GCACGTTGGAAGCCTGAAAC+AGG | 0.364470 | 6.1:+3760800 | MS.gene54686:CDS |
| CAACCTCTTGTTAAAGATGT+AGG | 0.366945 | 6.1:+3761211 | MS.gene54686:CDS |
| ATGTTTAAGGAACGTAACTA+TGG | 0.371416 | 6.1:+3764066 | MS.gene54686:intron |
| CTTTCTTGTATCCTTGAGTT+TGG | 0.375582 | 6.1:+3762823 | MS.gene54686:CDS |
| ATGTTCCTTTGTAGCTCTAT+GGG | 0.375904 | 6.1:+3763014 | MS.gene54686:intron |
| ACATCAAGAAAAGGAGATAA+TGG | 0.382507 | 6.1:+3760905 | MS.gene54686:CDS |
| TTCCAACTTAATGCAAATCT+TGG | 0.384721 | 6.1:-3761026 | None:intergenic |
| GAAGATTGTTCAAGGCTAAC+AGG | 0.389692 | 6.1:+3761116 | MS.gene54686:CDS |
| CTATGGGTTTCGCCAAGGAC+TGG | 0.394553 | 6.1:+3763030 | MS.gene54686:CDS |
| GGTCTAACCGTTGAGATTGA+TGG | 0.403981 | 6.1:-3764112 | None:intergenic |
| TGAGTTTGGCGGTGTATCCA+TGG | 0.404103 | 6.1:+3762837 | MS.gene54686:CDS |
| GCTTTACTGCTTGCTGAAGA+TGG | 0.412974 | 6.1:+3762910 | MS.gene54686:CDS |
| TACAAGGAACGACATGCAAT+TGG | 0.415503 | 6.1:+3761283 | MS.gene54686:CDS |
| AACAAGTTCCGAGTCTCCTT+TGG | 0.419868 | 6.1:-3763140 | None:intergenic |
| GAGTTTGGCGGTGTATCCAT+GGG | 0.427150 | 6.1:+3762838 | MS.gene54686:CDS |
| AAAAGAGTCCGCTGAGTATC+GGG | 0.427646 | 6.1:+3763063 | MS.gene54686:CDS |
| GATGCCTTTGGTACACTTCA+AGG | 0.433112 | 6.1:+3761647 | MS.gene54686:CDS |
| TTTCTCACCTGTTGTTTGGT+TGG | 0.444170 | 6.1:-3761701 | None:intergenic |
| AACTTAATGCAAATCTTGGC+TGG | 0.446598 | 6.1:-3761022 | None:intergenic |
| TTGTTTGGTGACCCAGTCCT+TGG | 0.447831 | 6.1:-3763042 | None:intergenic |
| AGCCAAGATTTGCATTAAGT+TGG | 0.449507 | 6.1:+3761024 | MS.gene54686:CDS |
| TGCAACAGATTCTGGATCCC+TGG | 0.450769 | 6.1:+3763519 | MS.gene54686:intron |
| GTCTTCTTGATCCTCACTCC+TGG | 0.453631 | 6.1:-3761184 | None:intergenic |
| AACCGTTGAGATTGATGGCC+CGG | 0.454084 | 6.1:-3764107 | None:intergenic |
| GAGCTGTTCGTAATGCAAAC+CGG | 0.456358 | 6.1:+3764088 | MS.gene54686:CDS |
| CAAAAGAGTCCGCTGAGTAT+CGG | 0.473133 | 6.1:+3763062 | MS.gene54686:CDS |
| AACATTAATCGTGGACCAGC+AGG | 0.474775 | 6.1:+3762880 | MS.gene54686:CDS |
| CTCAGAGCTGCTAGAAAAGA+TGG | 0.475776 | 6.1:+3761592 | MS.gene54686:CDS |
| TATGGGTTTCGCCAAGGACT+GGG | 0.476797 | 6.1:+3763031 | MS.gene54686:CDS |
| CTTTACTGCTTGCTGAAGAT+GGG | 0.482053 | 6.1:+3762911 | MS.gene54686:CDS |
| GCTTGCTGAAGATGGGAGTC+TGG | 0.485253 | 6.1:+3762918 | MS.gene54686:CDS |
| TCTTGTATCCTTGAGTTTGG+CGG | 0.487937 | 6.1:+3762826 | MS.gene54686:CDS |
| AATCGAATCACAGATGCCTT+TGG | 0.490469 | 6.1:+3761635 | MS.gene54686:CDS |
| CAGGGCTAGTCTCGTGAGAA+TGG | 0.497072 | 6.1:-3761087 | None:intergenic |
| AGTTGGAAGACGATGGTTTG+TGG | 0.499523 | 6.1:+3761041 | MS.gene54686:CDS |
| TCAAAGAATTTGGTAGATTG+TGG | 0.500305 | 6.1:+3760596 | MS.gene54686:CDS |
| AAGATTAGAACATCAAGAAA+AGG | 0.501587 | 6.1:+3760896 | MS.gene54686:CDS |
| CGACATGCAATTGGAAAAGA+AGG | 0.505598 | 6.1:+3761292 | MS.gene54686:CDS |
| TGCAAAGGGAAGATTGTTCA+AGG | 0.507962 | 6.1:+3761108 | MS.gene54686:CDS |
| AGTTAAACCAACCAAACAAC+AGG | 0.510461 | 6.1:+3761694 | MS.gene54686:CDS |
| TTTAAGTATGTTACTGCCAA+AGG | 0.514586 | 6.1:+3763124 | MS.gene54686:CDS |
| TTGAAACATGCGAGTATGAA+AGG | 0.526301 | 6.1:+3763100 | MS.gene54686:CDS |
| AATCGTGGACCAGCAGGTGC+AGG | 0.529975 | 6.1:+3762886 | MS.gene54686:CDS |
| GATAACTCTAATGATAATGA+AGG | 0.530992 | 6.1:+3760713 | MS.gene54686:CDS |
| TAAATACCCTGGAAATGTGT+TGG | 0.533351 | 6.1:-3763619 | None:intergenic |
| TGCGGGAAATTATGTTTACA+AGG | 0.537391 | 6.1:+3761267 | MS.gene54686:CDS |
| TGAACAATCTTCCCTTTGCA+GGG | 0.541033 | 6.1:-3761105 | None:intergenic |
| ATCCAAAGCACTGATGATCC+AGG | 0.543376 | 6.1:+3761166 | MS.gene54686:CDS |
| TTTAAAGAAATTATGTGCTG+AGG | 0.544923 | 6.1:+3763559 | MS.gene54686:CDS |
| TAGCTCTATGGGTTTCGCCA+AGG | 0.553648 | 6.1:+3763025 | MS.gene54686:intron |
| TGTGGTACTATTCATGATGA+AGG | 0.556353 | 6.1:+3760614 | MS.gene54686:CDS |
| CACGAGACTAGCCCTGCAAA+GGG | 0.557494 | 6.1:+3761094 | MS.gene54686:CDS |
| TCACGAGACTAGCCCTGCAA+AGG | 0.558154 | 6.1:+3761093 | MS.gene54686:CDS |
| AGTAAAGCTCCTGCACCTGC+TGG | 0.558433 | 6.1:-3762895 | None:intergenic |
| GATAACTCGAATGATAATGA+AGG | 0.559715 | 6.1:+3760647 | MS.gene54686:CDS |
| GATAACTCGAATGATAATGA+AGG | 0.559715 | 6.1:+3760680 | MS.gene54686:CDS |
| TGGATACACCGCCAAACTCA+AGG | 0.570316 | 6.1:-3762834 | None:intergenic |
| AGACAACAACACAAGAATGA+TGG | 0.575149 | 6.1:+3761520 | MS.gene54686:intron |
| AATTCTTGCTTGCTCAAGAG+AGG | 0.580330 | 6.1:+3760943 | MS.gene54686:CDS |
| ATGCCTTTGGTACACTTCAA+GGG | 0.587883 | 6.1:+3761648 | MS.gene54686:CDS |
| TGCATTAAGTTGGAAGACGA+TGG | 0.588214 | 6.1:+3761034 | MS.gene54686:CDS |
| AGCTGTTCGTAATGCAAACC+GGG | 0.588529 | 6.1:+3764089 | MS.gene54686:CDS |
| AGCTGCTAGAAAAGATGGAG+TGG | 0.602196 | 6.1:+3761597 | MS.gene54686:CDS |
| ATTCTTGCTTGCTCAAGAGA+GGG | 0.604718 | 6.1:+3760944 | MS.gene54686:CDS |
| CCCTGGAAATGTGTTGGATG+CGG | 0.605910 | 6.1:-3763613 | None:intergenic |
| GCTCCTACATCTTTAACAAG+AGG | 0.607465 | 6.1:-3761214 | None:intergenic |
| TGTTACTGCCAAAGGAGACT+CGG | 0.617844 | 6.1:+3763132 | MS.gene54686:CDS |
| CCGCATCCAACACATTTCCA+GGG | 0.618262 | 6.1:+3763613 | MS.gene54686:CDS |
| AGTTTGGCGGTGTATCCATG+GGG | 0.626952 | 6.1:+3762839 | MS.gene54686:CDS |
| CACGTTGGAAGCCTGAAACA+GGG | 0.628231 | 6.1:+3760801 | MS.gene54686:CDS |
| AACCGGGCCATCAATCTCAA+CGG | 0.633568 | 6.1:+3764105 | MS.gene54686:CDS |
| GGTGATCTAAACATTAATCG+TGG | 0.639032 | 6.1:+3762871 | MS.gene54686:CDS |
| ACACTTCAAGGGTATGCGCA+TGG | 0.648714 | 6.1:+3761659 | MS.gene54686:CDS |
| GCACTGATGATCCAGGAGTG+AGG | 0.654669 | 6.1:+3761173 | MS.gene54686:CDS |
| ATACCCTTGAAGTGTACCAA+AGG | 0.664715 | 6.1:-3761651 | None:intergenic |
| CTAATGATGATGAAGCACGT+TGG | 0.674855 | 6.1:+3760786 | MS.gene54686:CDS |
| GTTTGGCGGTGTATCCATGG+GGG | 0.709941 | 6.1:+3762840 | MS.gene54686:CDS |
| GAGTAAAGCCCGATACTCAG+CGG | 0.716233 | 6.1:-3763071 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGTAAATATTCATATAATT+AGG | - | chr6.1:3763969-3763988 | None:intergenic | 10.0% |
| !!! | TGTATTTTTTTTAATGTTTA+AGG | + | chr6.1:3764053-3764072 | MS.gene54686:intron | 10.0% |
| !! | AATCTAGTATAATATGAATT+TGG | + | chr6.1:3763862-3763881 | MS.gene54686:intron | 15.0% |
| !! | TAAAAATGAAAAGTAACAAT+GGG | - | chr6.1:3763456-3763475 | None:intergenic | 15.0% |
| !! | TTAAAAATGAAAAGTAACAA+TGG | - | chr6.1:3763457-3763476 | None:intergenic | 15.0% |
| !! | AGATAATTAGCAATTATGTT+TGG | + | chr6.1:3761796-3761815 | MS.gene54686:intron | 20.0% |
| !! | ATGAATATTTACATTCAGTT+CGG | + | chr6.1:3763975-3763994 | MS.gene54686:intron | 20.0% |
| !! | ATTTCCAAAATGTTATAGAT+TGG | + | chr6.1:3761735-3761754 | MS.gene54686:intron | 20.0% |
| !! | CATAAAATCAAATGTCTATT+GGG | - | chr6.1:3762575-3762594 | None:intergenic | 20.0% |
| !! | GAAAATTCCAAGTAATTATA+TGG | + | chr6.1:3763316-3763335 | MS.gene54686:intron | 20.0% |
| !! | TAATATGAATTTGGAAATTC+TGG | + | chr6.1:3763871-3763890 | MS.gene54686:intron | 20.0% |
| !! | TCATAAAATCAAATGTCTAT+TGG | - | chr6.1:3762576-3762595 | None:intergenic | 20.0% |
| !! | TTAACAATATCTAACCAATT+AGG | - | chr6.1:3763426-3763445 | None:intergenic | 20.0% |
| !!! | AAAGAAACCTTTCTTTTTTT+GGG | - | chr6.1:3763380-3763399 | None:intergenic | 20.0% |
| !!! | AAATCCAATCTATAACATTT+TGG | - | chr6.1:3761742-3761761 | None:intergenic | 20.0% |
| !!! | AAGAAATATTGTTTTGAACA+TGG | + | chr6.1:3762044-3762063 | MS.gene54686:intron | 20.0% |
| !!! | AAGCTATTTTTGTAAAATGA+GGG | + | chr6.1:3761333-3761352 | MS.gene54686:intron | 20.0% |
| !!! | AGGGTATTTATTTAGTAATT+CGG | + | chr6.1:3763632-3763651 | MS.gene54686:intron | 20.0% |
| !!! | ATATATACATGTTTTTCTGT+TGG | - | chr6.1:3762474-3762493 | None:intergenic | 20.0% |
| !!! | GATGATGTTAAAACATTTTA+TGG | + | chr6.1:3760842-3760861 | MS.gene54686:CDS | 20.0% |
| !!! | TAAGCTATTTTTGTAAAATG+AGG | + | chr6.1:3761332-3761351 | MS.gene54686:intron | 20.0% |
| !!! | TATTCTGCTCATTATAATTT+TGG | + | chr6.1:3761477-3761496 | MS.gene54686:intron | 20.0% |
| ! | AAAGAAACTACAACAAAGAA+AGG | + | chr6.1:3762084-3762103 | MS.gene54686:intron | 25.0% |
| ! | AAAGCAATATTCAAATGTGT+TGG | - | chr6.1:3763716-3763735 | None:intergenic | 25.0% |
| ! | AAGATTAGAACATCAAGAAA+AGG | + | chr6.1:3760896-3760915 | MS.gene54686:CDS | 25.0% |
| ! | AATTAGGAGTCTAATGTTAT+TGG | - | chr6.1:3763953-3763972 | None:intergenic | 25.0% |
| ! | AGTAATATTCTGTGAACAAT+TGG | - | chr6.1:3763287-3763306 | None:intergenic | 25.0% |
| ! | ATTGTTCACAGAATATTACT+TGG | + | chr6.1:3763287-3763306 | MS.gene54686:intron | 25.0% |
| ! | CAAAAAAAGAAAGGTTTCTT+TGG | + | chr6.1:3763379-3763398 | MS.gene54686:intron | 25.0% |
| ! | GAATTACTAAATAAATACCC+TGG | - | chr6.1:3763633-3763652 | None:intergenic | 25.0% |
| ! | GATTTAGTTATTCAAGCATT+TGG | - | chr6.1:3763846-3763865 | None:intergenic | 25.0% |
| ! | GTAGAAACCATATAATTACT+TGG | - | chr6.1:3763326-3763345 | None:intergenic | 25.0% |
| ! | TAGTTCATATTCATCCTAAT+TGG | + | chr6.1:3763409-3763428 | MS.gene54686:intron | 25.0% |
| ! | TTTAAAGAAATTATGTGCTG+AGG | + | chr6.1:3763559-3763578 | MS.gene54686:CDS | 25.0% |
| !! | AAGCTTTTATGAAGTAAAGA+TGG | + | chr6.1:3762389-3762408 | MS.gene54686:intron | 25.0% |
| !! | AGTTTTTATCTCCTCAATTT+TGG | + | chr6.1:3764001-3764020 | MS.gene54686:intron | 25.0% |
| !! | GATAACTCTAATGATAATGA+AGG | + | chr6.1:3760713-3760732 | MS.gene54686:CDS | 25.0% |
| !! | TAATTTGCAATCCAAAATTG+AGG | - | chr6.1:3764015-3764034 | None:intergenic | 25.0% |
| !! | TGATTTTATGATACTACAGT+TGG | + | chr6.1:3762585-3762604 | MS.gene54686:intron | 25.0% |
| !! | TTCTGATTTGAATTTCAGAA+GGG | - | chr6.1:3762505-3762524 | None:intergenic | 25.0% |
| !!! | CAAAGAAACCTTTCTTTTTT+TGG | - | chr6.1:3763381-3763400 | None:intergenic | 25.0% |
| !!! | GACAATTTTTTTCCTTAGAT+GGG | - | chr6.1:3761003-3761022 | None:intergenic | 25.0% |
| !!! | TGACTTTTTTTTTTGTAGAC+AGG | - | chr6.1:3763817-3763836 | None:intergenic | 25.0% |
| !!! | TTTATGCTTGGTTTTCTTTA+TGG | + | chr6.1:3762721-3762740 | MS.gene54686:intron | 25.0% |
| AAATGTGTGATCAAATGCTT+TGG | - | chr6.1:3763677-3763696 | None:intergenic | 30.0% | |
| AATGTGTGATCAAATGCTTT+GGG | - | chr6.1:3763676-3763695 | None:intergenic | 30.0% | |
| ACATCAAGAAAAGGAGATAA+TGG | + | chr6.1:3760905-3760924 | MS.gene54686:CDS | 30.0% | |
| AGCTTAAACAATGTAACTCT+AGG | - | chr6.1:3761874-3761893 | None:intergenic | 30.0% | |
| ATGCAGCAATTCAATTCAAT+TGG | + | chr6.1:3762953-3762972 | MS.gene54686:intron | 30.0% | |
| ATGTTTAAGGAACGTAACTA+TGG | + | chr6.1:3764066-3764085 | MS.gene54686:intron | 30.0% | |
| ATTCACTAACAAAACCAGTT+TGG | - | chr6.1:3761900-3761919 | None:intergenic | 30.0% | |
| CAAATACCGACATATGTTAT+TGG | + | chr6.1:3763493-3763512 | MS.gene54686:intron | 30.0% | |
| CACATTTGAATATTGCTTTG+TGG | + | chr6.1:3763717-3763736 | MS.gene54686:intron | 30.0% | |
| CTTTCAAATTGGAGAGTTTA+CGG | + | chr6.1:3762354-3762373 | MS.gene54686:intron | 30.0% | |
| GAAGCGAATAAGTGAAAAAA+TGG | + | chr6.1:3761559-3761578 | MS.gene54686:CDS | 30.0% | |
| GCAAAACCAATAACATATGT+CGG | - | chr6.1:3763502-3763521 | None:intergenic | 30.0% | |
| GCTTAAACAATGTAACTCTA+GGG | - | chr6.1:3761873-3761892 | None:intergenic | 30.0% | |
| GTGAATTCACCTTTAATCTA+AGG | + | chr6.1:3761921-3761940 | MS.gene54686:intron | 30.0% | |
| TCAAAGAATTTGGTAGATTG+TGG | + | chr6.1:3760596-3760615 | MS.gene54686:CDS | 30.0% | |
| TGAAGTTGTACCTTTCAAAT+TGG | + | chr6.1:3762343-3762362 | MS.gene54686:intron | 30.0% | |
| TGATCTTGAACAATAAAGCT+AGG | - | chr6.1:3763924-3763943 | None:intergenic | 30.0% | |
| TGCAGCAATTCAATTCAATT+GGG | + | chr6.1:3762954-3762973 | MS.gene54686:intron | 30.0% | |
| TTCCAACTTAATGCAAATCT+TGG | - | chr6.1:3761029-3761048 | None:intergenic | 30.0% | |
| TTGTTTAAGCTTATCCAAAC+TGG | + | chr6.1:3761883-3761902 | MS.gene54686:intron | 30.0% | |
| TTTAAGTATGTTACTGCCAA+AGG | + | chr6.1:3763124-3763143 | MS.gene54686:CDS | 30.0% | |
| ! | ATACATGTTTTTCTGTTGGT+TGG | - | chr6.1:3762470-3762489 | None:intergenic | 30.0% |
| ! | CTTCTGATTTGAATTTCAGA+AGG | - | chr6.1:3762506-3762525 | None:intergenic | 30.0% |
| ! | GATAACTCGAATGATAATGA+AGG | + | chr6.1:3760647-3760666 | MS.gene54686:CDS | 30.0% |
| ! | TCTGATTTGAATTTCAGAAG+GGG | - | chr6.1:3762504-3762523 | None:intergenic | 30.0% |
| ! | TCTGCTCATTATAATTTTGG+TGG | + | chr6.1:3761480-3761499 | MS.gene54686:intron | 30.0% |
| ! | TTCTTTTCTATGTGCTAGTT+TGG | - | chr6.1:3762029-3762048 | None:intergenic | 30.0% |
| ! | TTTTATGATACTACAGTTGG+TGG | + | chr6.1:3762588-3762607 | MS.gene54686:intron | 30.0% |
| !! | AAAAAGCTCTGAGAAAGAAT+TGG | + | chr6.1:3762301-3762320 | MS.gene54686:intron | 30.0% |
| !!! | AAACCTTTCTTTTTTTGGGA+AGG | - | chr6.1:3763376-3763395 | None:intergenic | 30.0% |
| !!! | AACCTTTCTTTTTTTGGGAA+GGG | - | chr6.1:3763375-3763394 | None:intergenic | 30.0% |
| !!! | ATGCTTTGAAAAAGGGTTTT+AGG | + | chr6.1:3760870-3760889 | MS.gene54686:CDS | 30.0% |
| !!! | GGACAATTTTTTTCCTTAGA+TGG | - | chr6.1:3761004-3761023 | None:intergenic | 30.0% |
| !!! | TTTTTCTGTTGGTTGGTAAA+AGG | - | chr6.1:3762463-3762482 | None:intergenic | 30.0% |
| AACATTTCTCACCTGTTGTT+TGG | - | chr6.1:3761708-3761727 | None:intergenic | 35.0% | |
| AACTTAATGCAAATCTTGGC+TGG | - | chr6.1:3761025-3761044 | None:intergenic | 35.0% | |
| AATGTCTATTGGGACATTTG+TGG | - | chr6.1:3762565-3762584 | None:intergenic | 35.0% | |
| AGACAACAACACAAGAATGA+TGG | + | chr6.1:3761520-3761539 | MS.gene54686:intron | 35.0% | |
| AGCCAAGATTTGCATTAAGT+TGG | + | chr6.1:3761024-3761043 | MS.gene54686:CDS | 35.0% | |
| AGTTAAACCAACCAAACAAC+AGG | + | chr6.1:3761694-3761713 | MS.gene54686:CDS | 35.0% | |
| ATGTCTATTGGGACATTTGT+GGG | - | chr6.1:3762564-3762583 | None:intergenic | 35.0% | |
| CAACCTCTTGTTAAAGATGT+AGG | + | chr6.1:3761211-3761230 | MS.gene54686:CDS | 35.0% | |
| CGTAAACTCTCCAATTTGAA+AGG | - | chr6.1:3762356-3762375 | None:intergenic | 35.0% | |
| CTACAAAGGAACATAAGAGT+TGG | - | chr6.1:3763008-3763027 | None:intergenic | 35.0% | |
| CTGGTTCAATAGAAACTTTG+AGG | - | chr6.1:3762686-3762705 | None:intergenic | 35.0% | |
| CTTTCTTGTATCCTTGAGTT+TGG | + | chr6.1:3762823-3762842 | MS.gene54686:CDS | 35.0% | |
| GGTGATCTAAACATTAATCG+TGG | + | chr6.1:3762871-3762890 | MS.gene54686:CDS | 35.0% | |
| GTTAAAAACTCTCCCATCTA+AGG | + | chr6.1:3760988-3761007 | MS.gene54686:CDS | 35.0% | |
| TAAATACCCTGGAAATGTGT+TGG | - | chr6.1:3763622-3763641 | None:intergenic | 35.0% | |
| TACAACAAAGAAAGGCAATG+AGG | + | chr6.1:3762092-3762111 | MS.gene54686:intron | 35.0% | |
| TAGAACTTCACAAGCTGATT+TGG | + | chr6.1:3762270-3762289 | MS.gene54686:intron | 35.0% | |
| TCTACATTAAGAGCAACCTA+AGG | + | chr6.1:3763341-3763360 | MS.gene54686:intron | 35.0% | |
| TCTATGCAGAAAAACGTTGA+TGG | - | chr6.1:3762254-3762273 | None:intergenic | 35.0% | |
| TGAGGAATTGAGCAATTACA+GGG | - | chr6.1:3762668-3762687 | None:intergenic | 35.0% | |
| TGCGGGAAATTATGTTTACA+AGG | + | chr6.1:3761267-3761286 | MS.gene54686:CDS | 35.0% | |
| TGTGGTACTATTCATGATGA+AGG | + | chr6.1:3760614-3760633 | MS.gene54686:CDS | 35.0% | |
| TTCAAATGTGTTGGATGCAT+TGG | - | chr6.1:3763707-3763726 | None:intergenic | 35.0% | |
| TTGAAACATGCGAGTATGAA+AGG | + | chr6.1:3763100-3763119 | MS.gene54686:CDS | 35.0% | |
| TTGAGGAATTGAGCAATTAC+AGG | - | chr6.1:3762669-3762688 | None:intergenic | 35.0% | |
| ! | ATGTTCCTTTGTAGCTCTAT+GGG | + | chr6.1:3763014-3763033 | MS.gene54686:intron | 35.0% |
| ! | GAAGAACTTTTCATCACAGT+CGG | - | chr6.1:3762540-3762559 | None:intergenic | 35.0% |
| ! | GAAGTAAAGATGGTTTGTGA+TGG | + | chr6.1:3762399-3762418 | MS.gene54686:intron | 35.0% |
| ! | GCATTGACACCTTAGATTAA+AGG | - | chr6.1:3761933-3761952 | None:intergenic | 35.0% |
| ! | TATGTTCCTTTGTAGCTCTA+TGG | + | chr6.1:3763013-3763032 | MS.gene54686:intron | 35.0% |
| ! | TTTCTATGTGCTAGTTTGGA+AGG | - | chr6.1:3762025-3762044 | None:intergenic | 35.0% |
| !! | ATGTTCGTCTTTGATTTTCC+AGG | - | chr6.1:3763540-3763559 | None:intergenic | 35.0% |
| !! | GGAGAGTATGCTTTGAAAAA+GGG | + | chr6.1:3760863-3760882 | MS.gene54686:CDS | 35.0% |
| !! | TGATTTCCCTTTGAAGTTAG+TGG | + | chr6.1:3762163-3762182 | MS.gene54686:intron | 35.0% |
| !! | TGGAGAGTATGCTTTGAAAA+AGG | + | chr6.1:3760862-3760881 | MS.gene54686:CDS | 35.0% |
| !! | TGTTCGTCTTTGATTTTCCA+GGG | - | chr6.1:3763539-3763558 | None:intergenic | 35.0% |
| !!! | ACCTTTCTTTTTTTGGGAAG+GGG | - | chr6.1:3763374-3763393 | None:intergenic | 35.0% |
| !!! | ATTGGTTTTGCAACAGATTC+TGG | + | chr6.1:3763511-3763530 | MS.gene54686:intron | 35.0% |
| !!! | CTTTGAAAAAGGGTTTTAGG+TGG | + | chr6.1:3760873-3760892 | MS.gene54686:CDS | 35.0% |
| AACCAAGAGTCACATATCTG+AGG | - | chr6.1:3761982-3762001 | None:intergenic | 40.0% | |
| AATCGAATCACAGATGCCTT+TGG | + | chr6.1:3761635-3761654 | MS.gene54686:CDS | 40.0% | |
| AATTCTTGCTTGCTCAAGAG+AGG | + | chr6.1:3760943-3760962 | MS.gene54686:CDS | 40.0% | |
| AGCAAGTCCACTAACTTCAA+AGG | - | chr6.1:3762173-3762192 | None:intergenic | 40.0% | |
| ATACCCTTGAAGTGTACCAA+AGG | - | chr6.1:3761654-3761673 | None:intergenic | 40.0% | |
| ATGCCTTTGGTACACTTCAA+GGG | + | chr6.1:3761648-3761667 | MS.gene54686:CDS | 40.0% | |
| ATTCTTGCTTGCTCAAGAGA+GGG | + | chr6.1:3760944-3760963 | MS.gene54686:CDS | 40.0% | |
| CAAGCATAAACTGTGAAGCA+CGG | - | chr6.1:3762711-3762730 | None:intergenic | 40.0% | |
| CGACATGCAATTGGAAAAGA+AGG | + | chr6.1:3761292-3761311 | MS.gene54686:CDS | 40.0% | |
| GAAAAACACATCCCTGTTTC+AGG | - | chr6.1:3760815-3760834 | None:intergenic | 40.0% | |
| GAAATTATGTGCTGAGGCTT+TGG | + | chr6.1:3763565-3763584 | MS.gene54686:CDS | 40.0% | |
| GAAGATTGTTCAAGGCTAAC+AGG | + | chr6.1:3761116-3761135 | MS.gene54686:CDS | 40.0% | |
| GCAAGTCCACTAACTTCAAA+GGG | - | chr6.1:3762172-3762191 | None:intergenic | 40.0% | |
| GCAATTGGAAAAGAAGGTGA+TGG | + | chr6.1:3761298-3761317 | MS.gene54686:intron | 40.0% | |
| GCACTGAAGGTTGTAATAAG+AGG | - | chr6.1:3762127-3762146 | None:intergenic | 40.0% | |
| GCTCCTACATCTTTAACAAG+AGG | - | chr6.1:3761217-3761236 | None:intergenic | 40.0% | |
| GTGGACGATGTGAAAAACAA+GGG | + | chr6.1:3762607-3762626 | MS.gene54686:intron | 40.0% | |
| GTGTCAATGCTACATACGTT+GGG | + | chr6.1:3761943-3761962 | MS.gene54686:intron | 40.0% | |
| TACAAGGAACGACATGCAAT+TGG | + | chr6.1:3761283-3761302 | MS.gene54686:CDS | 40.0% | |
| TACATACGTTGGGACTTACA+TGG | + | chr6.1:3761953-3761972 | MS.gene54686:intron | 40.0% | |
| TACTGCTAGGAGTTTCAGAA+GGG | - | chr6.1:3762432-3762451 | None:intergenic | 40.0% | |
| TCCCCTTCCCAAAAAAAGAA+AGG | + | chr6.1:3763370-3763389 | MS.gene54686:intron | 40.0% | |
| TCTTGTATCCTTGAGTTTGG+CGG | + | chr6.1:3762826-3762845 | MS.gene54686:CDS | 40.0% | |
| TGAACAATCTTCCCTTTGCA+GGG | - | chr6.1:3761108-3761127 | None:intergenic | 40.0% | |
| TGCAAAGGGAAGATTGTTCA+AGG | + | chr6.1:3761108-3761127 | MS.gene54686:CDS | 40.0% | |
| TTGAACAATCTTCCCTTTGC+AGG | - | chr6.1:3761109-3761128 | None:intergenic | 40.0% | |
| TTTCATCACAGTCGGTAAGT+TGG | - | chr6.1:3762532-3762551 | None:intergenic | 40.0% | |
| ! | ACCATTTTGCAAACGAGATG+CGG | + | chr6.1:3761249-3761268 | MS.gene54686:CDS | 40.0% |
| ! | CTAATGATGATGAAGCACGT+TGG | + | chr6.1:3760786-3760805 | MS.gene54686:CDS | 40.0% |
| ! | CTTTACTGCTTGCTGAAGAT+GGG | + | chr6.1:3762911-3762930 | MS.gene54686:CDS | 40.0% |
| ! | GAAAAACAAGGGCTAGTAGA+TGG | + | chr6.1:3762618-3762637 | MS.gene54686:intron | 40.0% |
| ! | TGAGCGTTAGAGCTTGATTT+TGG | + | chr6.1:3761827-3761846 | MS.gene54686:intron | 40.0% |
| ! | TTTCTCACCTGTTGTTTGGT+TGG | - | chr6.1:3761704-3761723 | None:intergenic | 40.0% |
| !! | AGTTAGTGGACTTGCTTGAA+TGG | + | chr6.1:3762177-3762196 | MS.gene54686:intron | 40.0% |
| !! | CTCGGAACTTGTTATCAATC+AGG | + | chr6.1:3763150-3763169 | MS.gene54686:CDS | 40.0% |
| !! | CTGTTGGTTGGTAAAAGGTT+TGG | - | chr6.1:3762458-3762477 | None:intergenic | 40.0% |
| !! | GAAGCAAAAACAAGCACTGA+AGG | - | chr6.1:3762140-3762159 | None:intergenic | 40.0% |
| !! | TGCATTAAGTTGGAAGACGA+TGG | + | chr6.1:3761034-3761053 | MS.gene54686:CDS | 40.0% |
| !!! | TCTTTTTTTGGGAAGGGGAT+GGG | - | chr6.1:3763369-3763388 | None:intergenic | 40.0% |
| !!! | TTCTTTTTTTGGGAAGGGGA+TGG | - | chr6.1:3763370-3763389 | None:intergenic | 40.0% |
| AAAAGAGTCCGCTGAGTATC+GGG | + | chr6.1:3763063-3763082 | MS.gene54686:CDS | 45.0% | |
| AACAAGTTCCGAGTCTCCTT+TGG | - | chr6.1:3763143-3763162 | None:intergenic | 45.0% | |
| AACATTAATCGTGGACCAGC+AGG | + | chr6.1:3762880-3762899 | MS.gene54686:CDS | 45.0% | |
| ACTGCTAGGAGTTTCAGAAG+GGG | - | chr6.1:3762431-3762450 | None:intergenic | 45.0% | |
| AGCTGCTAGAAAAGATGGAG+TGG | + | chr6.1:3761597-3761616 | MS.gene54686:CDS | 45.0% | |
| AGCTGTTCGTAATGCAAACC+GGG | + | chr6.1:3764089-3764108 | MS.gene54686:CDS | 45.0% | |
| AGTTGGAAGACGATGGTTTG+TGG | + | chr6.1:3761041-3761060 | MS.gene54686:CDS | 45.0% | |
| CAAAAGAGTCCGCTGAGTAT+CGG | + | chr6.1:3763062-3763081 | MS.gene54686:CDS | 45.0% | |
| CGAAACCCATAGAGCTACAA+AGG | - | chr6.1:3763022-3763041 | None:intergenic | 45.0% | |
| CGTGCTTCACAGTTTATGCT+TGG | + | chr6.1:3762709-3762728 | MS.gene54686:intron | 45.0% | |
| CTACTGCTAGGAGTTTCAGA+AGG | - | chr6.1:3762433-3762452 | None:intergenic | 45.0% | |
| CTCAGAGCTGCTAGAAAAGA+TGG | + | chr6.1:3761592-3761611 | MS.gene54686:CDS | 45.0% | |
| GAGCTGTTCGTAATGCAAAC+CGG | + | chr6.1:3764088-3764107 | MS.gene54686:CDS | 45.0% | |
| GATGCCTTTGGTACACTTCA+AGG | + | chr6.1:3761647-3761666 | MS.gene54686:CDS | 45.0% | |
| GGTGGACGATGTGAAAAACA+AGG | + | chr6.1:3762606-3762625 | MS.gene54686:intron | 45.0% | |
| GGTGTCAATGCTACATACGT+TGG | + | chr6.1:3761942-3761961 | MS.gene54686:intron | 45.0% | |
| TGCCTCAGATATGTGACTCT+TGG | + | chr6.1:3761977-3761996 | MS.gene54686:intron | 45.0% | |
| TGTTACTGCCAAAGGAGACT+CGG | + | chr6.1:3763132-3763151 | MS.gene54686:CDS | 45.0% | |
| ! | AAACAAGGGCTAGTAGATGG+TGG | + | chr6.1:3762621-3762640 | MS.gene54686:intron | 45.0% |
| ! | CCATTTTGCAAACGAGATGC+GGG | + | chr6.1:3761250-3761269 | MS.gene54686:CDS | 45.0% |
| ! | GCTTGAATGGTGATGAGTAG+AGG | + | chr6.1:3762190-3762209 | MS.gene54686:intron | 45.0% |
| ! | GCTTTACTGCTTGCTGAAGA+TGG | + | chr6.1:3762910-3762929 | MS.gene54686:CDS | 45.0% |
| ! | TCTTGTGTTGTTGTCTGCCA+TGG | - | chr6.1:3761516-3761535 | None:intergenic | 45.0% |
| ! | TGGAAAAGAAGGTGATGGCA+TGG | + | chr6.1:3761303-3761322 | MS.gene54686:intron | 45.0% |
| ! | TTGGTGGTTTCATCTCACCA+TGG | + | chr6.1:3761496-3761515 | MS.gene54686:intron | 45.0% |
| !! | AAAGGTTTGGTGCTACTGCT+AGG | - | chr6.1:3762445-3762464 | None:intergenic | 45.0% |
| !! | ACTCAGCGGACTCTTTTGTT+TGG | - | chr6.1:3763060-3763079 | None:intergenic | 45.0% |
| !! | ACTTCACAAGCTGATTTGGC+TGG | + | chr6.1:3762274-3762293 | MS.gene54686:intron | 45.0% |
| !! | ATCCAAAGCACTGATGATCC+AGG | + | chr6.1:3761166-3761185 | MS.gene54686:CDS | 45.0% |
| !! | CTTCACAAGCTGATTTGGCT+GGG | + | chr6.1:3762275-3762294 | MS.gene54686:intron | 45.0% |
| !! | GAGTATCGGGCTTTACTCTT+AGG | + | chr6.1:3763076-3763095 | MS.gene54686:CDS | 45.0% |
| !!! | TCTTTTCTAGCAGCTCTGAG+TGG | - | chr6.1:3761592-3761611 | None:intergenic | 45.0% |
| AACCGGGCCATCAATCTCAA+CGG | + | chr6.1:3764105-3764124 | MS.gene54686:CDS | 50.0% | |
| AGTTTGGCGGTGTATCCATG+GGG | + | chr6.1:3762839-3762858 | MS.gene54686:CDS | 50.0% | |
| ATCACCATACTCAACCCCCA+TGG | - | chr6.1:3762857-3762876 | None:intergenic | 50.0% | |
| CACGTTGGAAGCCTGAAACA+GGG | + | chr6.1:3760801-3760820 | MS.gene54686:CDS | 50.0% | |
| CCCGCATCTCGTTTGCAAAA+TGG | - | chr6.1:3761253-3761272 | None:intergenic | 50.0% | |
| CCCTGGAAATGTGTTGGATG+CGG | - | chr6.1:3763616-3763635 | None:intergenic | 50.0% | |
| CCGCATCCAACACATTTCCA+GGG | + | chr6.1:3763613-3763632 | MS.gene54686:CDS | 50.0% | |
| CTCCTGGATCATCAGTGCTT+TGG | - | chr6.1:3761171-3761190 | None:intergenic | 50.0% | |
| GAGTAAAGCCCGATACTCAG+CGG | - | chr6.1:3763074-3763093 | None:intergenic | 50.0% | |
| GAGTTTGGCGGTGTATCCAT+GGG | + | chr6.1:3762838-3762857 | MS.gene54686:CDS | 50.0% | |
| GTATCCATGGGGGTTGAGTA+TGG | + | chr6.1:3762850-3762869 | MS.gene54686:CDS | 50.0% | |
| GTCTTCTTGATCCTCACTCC+TGG | - | chr6.1:3761187-3761206 | None:intergenic | 50.0% | |
| TAAACTGTGAAGCACGGTGC+TGG | - | chr6.1:3762705-3762724 | None:intergenic | 50.0% | |
| TATGGGTTTCGCCAAGGACT+GGG | + | chr6.1:3763031-3763050 | MS.gene54686:CDS | 50.0% | |
| TCCGCATCCAACACATTTCC+AGG | + | chr6.1:3763612-3763631 | MS.gene54686:CDS | 50.0% | |
| TGAGTTTGGCGGTGTATCCA+TGG | + | chr6.1:3762837-3762856 | MS.gene54686:CDS | 50.0% | |
| TGCAACAGATTCTGGATCCC+TGG | + | chr6.1:3763519-3763538 | MS.gene54686:intron | 50.0% | |
| TGGATACACCGCCAAACTCA+AGG | - | chr6.1:3762837-3762856 | None:intergenic | 50.0% | |
| ! | AACCGTTGAGATTGATGGCC+CGG | - | chr6.1:3764110-3764129 | None:intergenic | 50.0% |
| ! | ACACTTCAAGGGTATGCGCA+TGG | + | chr6.1:3761659-3761678 | MS.gene54686:CDS | 50.0% |
| ! | AGGGCACTCTCATACACAGA+AGG | - | chr6.1:3761854-3761873 | None:intergenic | 50.0% |
| ! | TAGCTCTATGGGTTTCGCCA+AGG | + | chr6.1:3763025-3763044 | MS.gene54686:intron | 50.0% |
| ! | TTGTTTGGTGACCCAGTCCT+TGG | - | chr6.1:3763045-3763064 | None:intergenic | 50.0% |
| AGTAAAGCTCCTGCACCTGC+TGG | - | chr6.1:3762898-3762917 | None:intergenic | 55.0% | |
| CTATGGGTTTCGCCAAGGAC+TGG | + | chr6.1:3763030-3763049 | MS.gene54686:CDS | 55.0% | |
| GCACGTTGGAAGCCTGAAAC+AGG | + | chr6.1:3760800-3760819 | MS.gene54686:CDS | 55.0% | |
| GTTTGGCGGTGTATCCATGG+GGG | + | chr6.1:3762840-3762859 | MS.gene54686:CDS | 55.0% | |
| ! | CACGAGACTAGCCCTGCAAA+GGG | + | chr6.1:3761094-3761113 | MS.gene54686:CDS | 55.0% |
| ! | GCACTGATGATCCAGGAGTG+AGG | + | chr6.1:3761173-3761192 | MS.gene54686:CDS | 55.0% |
| ! | GCTTGCTGAAGATGGGAGTC+TGG | + | chr6.1:3762918-3762937 | MS.gene54686:CDS | 55.0% |
| ! | TCACGAGACTAGCCCTGCAA+AGG | + | chr6.1:3761093-3761112 | MS.gene54686:CDS | 55.0% |
| !! | CAGGGCTAGTCTCGTGAGAA+TGG | - | chr6.1:3761090-3761109 | None:intergenic | 55.0% |
| AATCGTGGACCAGCAGGTGC+AGG | + | chr6.1:3762886-3762905 | MS.gene54686:CDS | 60.0% | |
| ! | GGGAAGGGGATGGGTTCCTT+AGG | - | chr6.1:3763360-3763379 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 3760587 | 3764131 | 3760587 | ID=MS.gene54686 |
| chr6.1 | mRNA | 3760587 | 3764131 | 3760587 | ID=MS.gene54686.t1;Parent=MS.gene54686 |
| chr6.1 | exon | 3760587 | 3761313 | 3760587 | ID=MS.gene54686.t1.exon1;Parent=MS.gene54686.t1 |
| chr6.1 | CDS | 3760587 | 3761313 | 3760587 | ID=cds.MS.gene54686.t1;Parent=MS.gene54686.t1 |
| chr6.1 | exon | 3761522 | 3761715 | 3761522 | ID=MS.gene54686.t1.exon2;Parent=MS.gene54686.t1 |
| chr6.1 | CDS | 3761522 | 3761715 | 3761522 | ID=cds.MS.gene54686.t1;Parent=MS.gene54686.t1 |
| chr6.1 | exon | 3762823 | 3762939 | 3762823 | ID=MS.gene54686.t1.exon3;Parent=MS.gene54686.t1 |
| chr6.1 | CDS | 3762823 | 3762939 | 3762823 | ID=cds.MS.gene54686.t1;Parent=MS.gene54686.t1 |
| chr6.1 | exon | 3763028 | 3763171 | 3763028 | ID=MS.gene54686.t1.exon4;Parent=MS.gene54686.t1 |
| chr6.1 | CDS | 3763028 | 3763171 | 3763028 | ID=cds.MS.gene54686.t1;Parent=MS.gene54686.t1 |
| chr6.1 | exon | 3763527 | 3763634 | 3763527 | ID=MS.gene54686.t1.exon5;Parent=MS.gene54686.t1 |
| chr6.1 | CDS | 3763527 | 3763634 | 3763527 | ID=cds.MS.gene54686.t1;Parent=MS.gene54686.t1 |
| chr6.1 | exon | 3764075 | 3764131 | 3764075 | ID=MS.gene54686.t1.exon6;Parent=MS.gene54686.t1 |
| chr6.1 | CDS | 3764075 | 3764131 | 3764075 | ID=cds.MS.gene54686.t1;Parent=MS.gene54686.t1 |
| Gene Sequence |
| Protein sequence |
