Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60162.t1 | XP_003610331.1 | 98.4 | 433 | 7 | 0 | 1 | 433 | 14 | 446 | 4.70E-261 | 909.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60162.t1 | P48628 | 82.1 | 414 | 70 | 2 | 3 | 416 | 15 | 424 | 1.7e-211 | 736.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60162.t1 | G7JGR1 | 98.4 | 433 | 7 | 0 | 1 | 433 | 14 | 446 | 3.4e-261 | 909.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene60162 | 0.807454 | 5.01E-50 | -1.69E-46 |
| MS.gene049217 | MS.gene60162 | 0.836565 | 8.69E-57 | -1.69E-46 |
| MS.gene049222 | MS.gene60162 | 0.822623 | 2.15E-53 | -1.69E-46 |
| MS.gene049232 | MS.gene60162 | 0.854058 | 1.58E-61 | -1.69E-46 |
| MS.gene049285 | MS.gene60162 | 0.870772 | 1.13E-66 | -1.69E-46 |
| MS.gene049320 | MS.gene60162 | 0.867293 | 1.52E-65 | -1.69E-46 |
| MS.gene049369 | MS.gene60162 | 0.801531 | 8.62E-49 | -1.69E-46 |
| MS.gene049396 | MS.gene60162 | 0.824817 | 6.57E-54 | -1.69E-46 |
| MS.gene049609 | MS.gene60162 | 0.811832 | 5.75E-51 | -1.69E-46 |
| MS.gene049805 | MS.gene60162 | 0.809194 | 2.13E-50 | -1.69E-46 |
| MS.gene05010 | MS.gene60162 | 0.844781 | 6.11E-59 | -1.69E-46 |
| MS.gene050163 | MS.gene60162 | 0.829549 | 4.84E-55 | -1.69E-46 |
| MS.gene050165 | MS.gene60162 | 0.835312 | 1.81E-56 | -1.69E-46 |
| MS.gene050216 | MS.gene60162 | 0.825527 | 4.47E-54 | -1.69E-46 |
| MS.gene050323 | MS.gene60162 | 0.867353 | 1.46E-65 | -1.69E-46 |
| MS.gene050333 | MS.gene60162 | 0.859741 | 3.35E-63 | -1.69E-46 |
| MS.gene050444 | MS.gene60162 | 0.805885 | 1.08E-49 | -1.69E-46 |
| MS.gene050496 | MS.gene60162 | 0.808246 | 3.40E-50 | -1.69E-46 |
| MS.gene050504 | MS.gene60162 | 0.837331 | 5.54E-57 | -1.69E-46 |
| MS.gene050518 | MS.gene60162 | 0.830009 | 3.74E-55 | -1.69E-46 |
| MS.gene050612 | MS.gene60162 | 0.838548 | 2.69E-57 | -1.69E-46 |
| MS.gene050662 | MS.gene60162 | 0.827311 | 1.68E-54 | -1.69E-46 |
| MS.gene050675 | MS.gene60162 | 0.828904 | 6.94E-55 | -1.69E-46 |
| MS.gene050686 | MS.gene60162 | 0.819962 | 8.82E-53 | -1.69E-46 |
| MS.gene050699 | MS.gene60162 | 0.802712 | 4.92E-49 | -1.69E-46 |
| MS.gene050772 | MS.gene60162 | 0.859531 | 3.88E-63 | -1.69E-46 |
| MS.gene050868 | MS.gene60162 | 0.816826 | 4.53E-52 | -1.69E-46 |
| MS.gene050871 | MS.gene60162 | 0.817875 | 2.63E-52 | -1.69E-46 |
| MS.gene050986 | MS.gene60162 | 0.822927 | 1.82E-53 | -1.69E-46 |
| MS.gene051228 | MS.gene60162 | 0.804791 | 1.82E-49 | -1.69E-46 |
| MS.gene051268 | MS.gene60162 | 0.800264 | 1.56E-48 | -1.69E-46 |
| MS.gene051551 | MS.gene60162 | 0.819603 | 1.06E-52 | -1.69E-46 |
| MS.gene051810 | MS.gene60162 | 0.804054 | 2.60E-49 | -1.69E-46 |
| MS.gene051874 | MS.gene60162 | 0.802002 | 6.90E-49 | -1.69E-46 |
| MS.gene052164 | MS.gene60162 | 0.806835 | 6.78E-50 | -1.69E-46 |
| MS.gene052486 | MS.gene60162 | 0.803427 | 3.50E-49 | -1.69E-46 |
| MS.gene052504 | MS.gene60162 | 0.80916 | 2.17E-50 | -1.69E-46 |
| MS.gene052506 | MS.gene60162 | 0.817523 | 3.16E-52 | -1.69E-46 |
| MS.gene052822 | MS.gene60162 | 0.846541 | 2.04E-59 | -1.69E-46 |
| MS.gene052870 | MS.gene60162 | 0.800932 | 1.14E-48 | -1.69E-46 |
| MS.gene052872 | MS.gene60162 | 0.817428 | 3.31E-52 | -1.69E-46 |
| MS.gene052916 | MS.gene60162 | 0.880847 | 3.92E-70 | -1.69E-46 |
| MS.gene053018 | MS.gene60162 | 0.842308 | 2.80E-58 | -1.69E-46 |
| MS.gene053213 | MS.gene60162 | 0.843721 | 1.18E-58 | -1.69E-46 |
| MS.gene053286 | MS.gene60162 | 0.844804 | 6.03E-59 | -1.69E-46 |
| MS.gene053420 | MS.gene60162 | -0.805284 | 1.44E-49 | -1.69E-46 |
| MS.gene053505 | MS.gene60162 | 0.806421 | 8.30E-50 | -1.69E-46 |
| MS.gene053574 | MS.gene60162 | 0.833864 | 4.17E-56 | -1.69E-46 |
| MS.gene053626 | MS.gene60162 | 0.814215 | 1.73E-51 | -1.69E-46 |
| MS.gene053632 | MS.gene60162 | 0.804749 | 1.86E-49 | -1.69E-46 |
| MS.gene053633 | MS.gene60162 | 0.803098 | 4.10E-49 | -1.69E-46 |
| MS.gene053824 | MS.gene60162 | 0.816719 | 4.78E-52 | -1.69E-46 |
| MS.gene053916 | MS.gene60162 | 0.846342 | 2.31E-59 | -1.69E-46 |
| MS.gene054003 | MS.gene60162 | 0.825886 | 3.67E-54 | -1.69E-46 |
| MS.gene054595 | MS.gene60162 | 0.830213 | 3.33E-55 | -1.69E-46 |
| MS.gene054642 | MS.gene60162 | 0.862745 | 4.08E-64 | -1.69E-46 |
| MS.gene054706 | MS.gene60162 | -0.811511 | 6.75E-51 | -1.69E-46 |
| MS.gene054954 | MS.gene60162 | 0.867068 | 1.80E-65 | -1.69E-46 |
| MS.gene05505 | MS.gene60162 | 0.841751 | 3.93E-58 | -1.69E-46 |
| MS.gene055212 | MS.gene60162 | 0.807958 | 3.92E-50 | -1.69E-46 |
| MS.gene055224 | MS.gene60162 | 0.818172 | 2.25E-52 | -1.69E-46 |
| MS.gene055362 | MS.gene60162 | 0.841161 | 5.62E-58 | -1.69E-46 |
| MS.gene055502 | MS.gene60162 | 0.839513 | 1.52E-57 | -1.69E-46 |
| MS.gene055577 | MS.gene60162 | 0.802714 | 4.92E-49 | -1.69E-46 |
| MS.gene055722 | MS.gene60162 | 0.819078 | 1.40E-52 | -1.69E-46 |
| MS.gene055750 | MS.gene60162 | 0.812267 | 4.62E-51 | -1.69E-46 |
| MS.gene055751 | MS.gene60162 | 0.807391 | 5.17E-50 | -1.69E-46 |
| MS.gene055776 | MS.gene60162 | 0.816809 | 4.57E-52 | -1.69E-46 |
| MS.gene05592 | MS.gene60162 | 0.818282 | 2.13E-52 | -1.69E-46 |
| MS.gene055941 | MS.gene60162 | 0.810901 | 9.15E-51 | -1.69E-46 |
| MS.gene056046 | MS.gene60162 | 0.853133 | 2.92E-61 | -1.69E-46 |
| MS.gene056374 | MS.gene60162 | 0.815103 | 1.10E-51 | -1.69E-46 |
| MS.gene056387 | MS.gene60162 | 0.815144 | 1.07E-51 | -1.69E-46 |
| MS.gene056448 | MS.gene60162 | 0.814277 | 1.67E-51 | -1.69E-46 |
| MS.gene056487 | MS.gene60162 | 0.850238 | 1.93E-60 | -1.69E-46 |
| MS.gene056504 | MS.gene60162 | 0.85123 | 1.02E-60 | -1.69E-46 |
| MS.gene056510 | MS.gene60162 | 0.825987 | 3.47E-54 | -1.69E-46 |
| MS.gene056549 | MS.gene60162 | 0.806448 | 8.19E-50 | -1.69E-46 |
| MS.gene056657 | MS.gene60162 | 0.881639 | 2.03E-70 | -1.69E-46 |
| MS.gene056692 | MS.gene60162 | 0.839143 | 1.89E-57 | -1.69E-46 |
| MS.gene056898 | MS.gene60162 | 0.860166 | 2.50E-63 | -1.69E-46 |
| MS.gene057076 | MS.gene60162 | 0.815877 | 7.38E-52 | -1.69E-46 |
| MS.gene057416 | MS.gene60162 | 0.831178 | 1.93E-55 | -1.69E-46 |
| MS.gene057857 | MS.gene60162 | 0.808494 | 3.01E-50 | -1.69E-46 |
| MS.gene057926 | MS.gene60162 | 0.858687 | 6.94E-63 | -1.69E-46 |
| MS.gene058157 | MS.gene60162 | 0.805018 | 1.63E-49 | -1.69E-46 |
| MS.gene058268 | MS.gene60162 | -0.818719 | 1.69E-52 | -1.69E-46 |
| MS.gene058269 | MS.gene60162 | -0.823943 | 1.05E-53 | -1.69E-46 |
| MS.gene058419 | MS.gene60162 | 0.849619 | 2.88E-60 | -1.69E-46 |
| MS.gene058773 | MS.gene60162 | 0.825767 | 3.92E-54 | -1.69E-46 |
| MS.gene059022 | MS.gene60162 | 0.839194 | 1.83E-57 | -1.69E-46 |
| MS.gene05913 | MS.gene60162 | 0.859275 | 4.63E-63 | -1.69E-46 |
| MS.gene059305 | MS.gene60162 | 0.815404 | 9.41E-52 | -1.69E-46 |
| MS.gene05934 | MS.gene60162 | 0.803821 | 2.90E-49 | -1.69E-46 |
| MS.gene059367 | MS.gene60162 | 0.821715 | 3.48E-53 | -1.69E-46 |
| MS.gene059677 | MS.gene60162 | 0.847861 | 8.84E-60 | -1.69E-46 |
| MS.gene059699 | MS.gene60162 | -0.803307 | 3.71E-49 | -1.69E-46 |
| MS.gene059703 | MS.gene60162 | -0.801777 | 7.67E-49 | -1.69E-46 |
| MS.gene059711 | MS.gene60162 | 0.804309 | 2.30E-49 | -1.69E-46 |
| MS.gene059718 | MS.gene60162 | 0.834053 | 3.74E-56 | -1.69E-46 |
| MS.gene059865 | MS.gene60162 | 0.848919 | 4.51E-60 | -1.69E-46 |
| MS.gene060482 | MS.gene60162 | 0.838819 | 2.29E-57 | -1.69E-46 |
| MS.gene060703 | MS.gene60162 | 0.824825 | 6.54E-54 | -1.69E-46 |
| MS.gene060762 | MS.gene60162 | 0.822105 | 2.83E-53 | -1.69E-46 |
| MS.gene060778 | MS.gene60162 | 0.822181 | 2.72E-53 | -1.69E-46 |
| MS.gene06077 | MS.gene60162 | 0.811787 | 5.88E-51 | -1.69E-46 |
| MS.gene060804 | MS.gene60162 | 0.815056 | 1.12E-51 | -1.69E-46 |
| MS.gene060982 | MS.gene60162 | 0.829305 | 5.55E-55 | -1.69E-46 |
| MS.gene061041 | MS.gene60162 | 0.806682 | 7.31E-50 | -1.69E-46 |
| MS.gene061134 | MS.gene60162 | 0.873576 | 1.32E-67 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60162.t1 | MTR_4g130980 | 98.383 | 433 | 7 | 0 | 1 | 433 | 14 | 446 | 0.0 | 888 |
| MS.gene60162.t1 | MTR_2g460790 | 74.537 | 432 | 105 | 3 | 2 | 432 | 19 | 446 | 0.0 | 684 |
| MS.gene60162.t1 | MTR_5g071170 | 27.812 | 320 | 215 | 9 | 77 | 384 | 30 | 345 | 9.74e-30 | 119 |
| MS.gene60162.t1 | MTR_7g068780 | 27.597 | 308 | 209 | 7 | 88 | 384 | 95 | 399 | 3.81e-29 | 119 |
| MS.gene60162.t1 | MTR_4g015630 | 29.299 | 314 | 196 | 11 | 88 | 384 | 89 | 393 | 7.84e-29 | 117 |
| MS.gene60162.t1 | MTR_3g464330 | 30.682 | 264 | 162 | 8 | 135 | 384 | 80 | 336 | 4.68e-24 | 103 |
| MS.gene60162.t1 | MTR_1g054035 | 23.642 | 313 | 215 | 6 | 92 | 381 | 33 | 344 | 1.70e-19 | 90.1 |
| MS.gene60162.t1 | MTR_7g068780 | 27.039 | 233 | 160 | 4 | 88 | 311 | 95 | 326 | 8.58e-19 | 87.4 |
| MS.gene60162.t1 | MTR_7g093200 | 23.913 | 322 | 219 | 9 | 78 | 381 | 81 | 394 | 1.77e-17 | 84.7 |
| MS.gene60162.t1 | MTR_1g111880 | 22.785 | 316 | 206 | 8 | 82 | 381 | 33 | 326 | 2.75e-12 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60162.t1 | AT4G30950 | 75.598 | 418 | 101 | 1 | 16 | 432 | 29 | 446 | 0.0 | 678 |
| MS.gene60162.t1 | AT3G11170 | 26.171 | 363 | 246 | 10 | 63 | 410 | 68 | 423 | 3.17e-28 | 116 |
| MS.gene60162.t1 | AT5G05580 | 26.957 | 345 | 230 | 10 | 81 | 410 | 79 | 416 | 6.47e-28 | 115 |
| MS.gene60162.t1 | AT2G29980 | 27.526 | 287 | 193 | 7 | 135 | 410 | 79 | 361 | 2.12e-27 | 113 |
| MS.gene60162.t1 | AT5G05580 | 27.419 | 310 | 203 | 10 | 81 | 375 | 79 | 381 | 5.64e-26 | 108 |
| MS.gene60162.t1 | AT3G12120 | 26.641 | 259 | 172 | 5 | 139 | 381 | 87 | 343 | 6.92e-21 | 94.4 |
| MS.gene60162.t1 | AT3G12120 | 26.641 | 259 | 172 | 5 | 139 | 381 | 87 | 343 | 6.92e-21 | 94.4 |
| MS.gene60162.t1 | AT2G29980 | 27.957 | 186 | 123 | 4 | 135 | 311 | 79 | 262 | 5.68e-18 | 84.3 |
Find 92 sgRNAs with CRISPR-Local
Find 388 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGATGCCTGAACCCTTTA+TGG | 0.053591 | 8.4:-2669893 | None:intergenic |
| CATGGTTGGGCTATCACTTC+TGG | 0.189410 | 8.4:+2672617 | MS.gene60162:CDS |
| CCAGTCTTGTAAATAATTAA+TGG | 0.208810 | 8.4:-2672562 | None:intergenic |
| ATAAATCCATCCAAGAAAAT+TGG | 0.226172 | 8.4:+2675057 | MS.gene60162:CDS |
| TTCACCCTCTTTATTTCATT+TGG | 0.236235 | 8.4:-2672496 | None:intergenic |
| GCTGCACAAGCACAGCTTAA+TGG | 0.258653 | 8.4:+2674273 | MS.gene60162:CDS |
| GGGATATATGGTGTGGAATA+TGG | 0.265223 | 8.4:-2675001 | None:intergenic |
| TTGAGGAAAGCAATAATATA+TGG | 0.266288 | 8.4:+2672270 | MS.gene60162:CDS |
| ATAAGAAAATCCACCTTCTT+AGG | 0.267567 | 8.4:-2670098 | None:intergenic |
| CTAATTGGACGAGATTCTTT+AGG | 0.270288 | 8.4:-2675521 | None:intergenic |
| GCCCCACAGTTCTTTGTTAT+AGG | 0.274592 | 8.4:+2670830 | MS.gene60162:intron |
| TACTTCCTCTGGCTTGGGCT+TGG | 0.300422 | 8.4:+2670655 | MS.gene60162:CDS |
| TTTGTTCTCAAATTCAAAAC+TGG | 0.304706 | 8.4:-2669439 | None:intergenic |
| ACAGGCTTATCTAGCCTAAA+AGG | 0.314110 | 8.4:+2669858 | MS.gene60162:intron |
| TGGCCATCCAATTGCTATAA+AGG | 0.318227 | 8.4:-2672542 | None:intergenic |
| TGGACAGGAACTGCTGTAAC+TGG | 0.323895 | 8.4:+2670675 | MS.gene60162:CDS |
| TGGATAAATTAGTGGCAAAA+AGG | 0.327260 | 8.4:-2670918 | None:intergenic |
| TAAATCCATCCAAGAAAATT+GGG | 0.338050 | 8.4:+2675058 | MS.gene60162:CDS |
| TCATGGGATGGATAAAATTC+TGG | 0.348865 | 8.4:+2672587 | MS.gene60162:CDS |
| ATCTGCCACTTCCTATGCGC+TGG | 0.359174 | 8.4:+2670599 | MS.gene60162:CDS |
| TATACGAGCTGTGGCAATTC+CGG | 0.360109 | 8.4:+2669953 | MS.gene60162:CDS |
| GGTGATGGGTTAATCCATAA+AGG | 0.366623 | 8.4:+2669879 | MS.gene60162:CDS |
| GTATCTACTTCCTCTGGCTT+GGG | 0.367325 | 8.4:+2670650 | MS.gene60162:CDS |
| GGTATCTACTTCCTCTGGCT+TGG | 0.369690 | 8.4:+2670649 | MS.gene60162:CDS |
| AAAGAGGGTGAAGATAAGTT+TGG | 0.373712 | 8.4:+2672507 | MS.gene60162:CDS |
| ATACTGCTTGGCAGCCTGTT+TGG | 0.377429 | 8.4:+2672220 | MS.gene60162:CDS |
| GATATGGTCCATTTCGTTGC+TGG | 0.383059 | 8.4:+2672292 | MS.gene60162:CDS |
| TCAAACTCATCCTGCCAAAC+AGG | 0.398783 | 8.4:-2672234 | None:intergenic |
| CCATTAATTATTTACAAGAC+TGG | 0.404814 | 8.4:+2672562 | MS.gene60162:CDS |
| TATTTACAAGACTGGAATCA+TGG | 0.410988 | 8.4:+2672570 | MS.gene60162:CDS |
| ATGGTTGGGCTATCACTTCT+GGG | 0.416170 | 8.4:+2672618 | MS.gene60162:CDS |
| TGCTTGGCAGCCTGTTTGGC+AGG | 0.421716 | 8.4:+2672224 | MS.gene60162:CDS |
| ATAACTGAAACTTTATTCCT+AGG | 0.422066 | 8.4:-2669933 | None:intergenic |
| TTAAATCGCCATGGCTCATA+TGG | 0.429770 | 8.4:-2670938 | None:intergenic |
| GGACCTAATTAGGCATAATC+AGG | 0.437567 | 8.4:-2675563 | None:intergenic |
| CTGTACTCCGCACTTTCCAC+TGG | 0.440501 | 8.4:-2669987 | None:intergenic |
| TCCGCACTTTCCACTGGAGC+TGG | 0.444789 | 8.4:-2669981 | None:intergenic |
| CCTCTGGCTTGGGCTTGGAC+AGG | 0.450692 | 8.4:+2670660 | MS.gene60162:CDS |
| TGAATGAGGCTAGTTGGAAT+TGG | 0.451740 | 8.4:+2675420 | MS.gene60162:CDS |
| GGTTAATCCATAAAGGGTTC+AGG | 0.453241 | 8.4:+2669886 | MS.gene60162:CDS |
| CATTACTTCTCTTCCTAAGA+AGG | 0.455511 | 8.4:+2670085 | MS.gene60162:CDS |
| TCAAATTCAAAACTGGCCTC+TGG | 0.458016 | 8.4:-2669432 | None:intergenic |
| TTCACTGTGCTTACCCTCAA+TGG | 0.459293 | 8.4:+2674301 | MS.gene60162:CDS |
| TCTGCCACTTCCTATGCGCT+GGG | 0.465046 | 8.4:+2670600 | MS.gene60162:CDS |
| GGCTCATATGGATAAATTAG+TGG | 0.465890 | 8.4:-2670926 | None:intergenic |
| ATAGACATCCAGCAACGAAA+TGG | 0.467653 | 8.4:-2672300 | None:intergenic |
| TCCACTGGAGCTGGTTCTAC+CGG | 0.468139 | 8.4:-2669972 | None:intergenic |
| AAAGCAATAATATATGGATA+TGG | 0.470604 | 8.4:+2672276 | MS.gene60162:CDS |
| AGTATCTGAATGAGGCTAGT+TGG | 0.473014 | 8.4:+2675414 | MS.gene60162:intron |
| AATAGAATACCAGGTGAGTA+AGG | 0.485843 | 8.4:-2669472 | None:intergenic |
| GAATATGGACATTAATATCA+TGG | 0.492331 | 8.4:-2674986 | None:intergenic |
| AAGCCCCAGCGCATAGGAAG+TGG | 0.495190 | 8.4:-2670604 | None:intergenic |
| GTGATGGGTTAATCCATAAA+GGG | 0.495739 | 8.4:+2669880 | MS.gene60162:CDS |
| TTCTGGTTGATGCCATGGTT+GGG | 0.509958 | 8.4:+2672604 | MS.gene60162:CDS |
| GCCCTGGTATCTACTTCCTC+TGG | 0.511022 | 8.4:+2670644 | MS.gene60162:CDS |
| AGAAGACATTGTTGGAACTC+TGG | 0.511878 | 8.4:+2670895 | MS.gene60162:CDS |
| TGCAGGGTTCTTCATTCCAG+AGG | 0.514835 | 8.4:+2669416 | None:intergenic |
| TTAGACCAAATGAAATAAAG+AGG | 0.524360 | 8.4:+2672491 | MS.gene60162:CDS |
| AGCCAGAGGAAGTAGATACC+AGG | 0.530649 | 8.4:-2670646 | None:intergenic |
| TTTAGGAGCAACTTCATCAA+AGG | 0.532877 | 8.4:-2675504 | None:intergenic |
| GGACAGGAACTGCTGTAACT+GGG | 0.535760 | 8.4:+2670676 | MS.gene60162:CDS |
| TTATCTAGCCTAAAAGGTGA+TGG | 0.540049 | 8.4:+2669864 | MS.gene60162:CDS |
| ATTCTGGTTGATGCCATGGT+TGG | 0.540405 | 8.4:+2672603 | MS.gene60162:CDS |
| CATAAGAAGCCCCAGCGCAT+AGG | 0.540899 | 8.4:-2670610 | None:intergenic |
| TCGCCTTTATAGCAATTGGA+TGG | 0.555332 | 8.4:+2672539 | MS.gene60162:CDS |
| ATTTACAAGACTGGAATCAT+GGG | 0.557510 | 8.4:+2672571 | MS.gene60162:CDS |
| ATTTCTGCTCCTTACTCACC+TGG | 0.564106 | 8.4:+2669463 | MS.gene60162:CDS |
| TTATGATTTCTAAAGCGCCC+TGG | 0.568345 | 8.4:+2670628 | MS.gene60162:CDS |
| TAAAATTCTGGTTGATGCCA+TGG | 0.571569 | 8.4:+2672599 | MS.gene60162:CDS |
| AGTTTCAGTTATACGAGCTG+TGG | 0.574707 | 8.4:+2669944 | MS.gene60162:CDS |
| TCCGGTAGAACCAGCTCCAG+TGG | 0.580163 | 8.4:+2669971 | MS.gene60162:CDS |
| TATCTAGCCTAAAAGGTGAT+GGG | 0.582199 | 8.4:+2669865 | MS.gene60162:CDS |
| GCTGGATGTCTATAGCTCAC+TGG | 0.582755 | 8.4:+2672310 | MS.gene60162:CDS |
| GACAGGAACTGCTGTAACTG+GGG | 0.584790 | 8.4:+2670677 | MS.gene60162:CDS |
| AAATTGGTAGAAGACATTGT+TGG | 0.585428 | 8.4:+2670887 | MS.gene60162:CDS |
| CATCCAAGAAAATTGGGGAA+AGG | 0.590847 | 8.4:+2675064 | MS.gene60162:CDS |
| TAATTTATCCATATGAGCCA+TGG | 0.590928 | 8.4:+2670930 | MS.gene60162:CDS |
| GCCAGAGGAAGTAGATACCA+GGG | 0.594327 | 8.4:-2670645 | None:intergenic |
| GCTGCTCGTAAATTATAGCT+TGG | 0.594700 | 8.4:-2675032 | None:intergenic |
| AAACAACTAGCTGAGCGCTA+TGG | 0.599870 | 8.4:+2670011 | MS.gene60162:CDS |
| GGTTGAAAGAAGATACTGCT+TGG | 0.603426 | 8.4:+2672208 | MS.gene60162:intron |
| TTGTCATGCTTAAATCGCCA+TGG | 0.610770 | 8.4:-2670947 | None:intergenic |
| AGATTGATGATGTTAAAGCA+TGG | 0.613392 | 8.4:+2670562 | MS.gene60162:CDS |
| TAGACCAAATGAAATAAAGA+GGG | 0.614606 | 8.4:+2672492 | MS.gene60162:CDS |
| CCTGTCCAAGCCCAAGCCAG+AGG | 0.628134 | 8.4:-2670660 | None:intergenic |
| ACCAGCTCCAGTGGAAAGTG+CGG | 0.631323 | 8.4:+2669980 | MS.gene60162:CDS |
| AAATCCATCCAAGAAAATTG+GGG | 0.635467 | 8.4:+2675059 | MS.gene60162:CDS |
| CAGAAGTGATAGCCCAACCA+TGG | 0.650623 | 8.4:-2672616 | None:intergenic |
| ATAGATGAGCACTTTCACCA+TGG | 0.653236 | 8.4:+2674200 | MS.gene60162:intron |
| CTGCCACTTCCTATGCGCTG+GGG | 0.655654 | 8.4:+2670601 | MS.gene60162:CDS |
| ACAAGACTGGAATCATGGGA+TGG | 0.658676 | 8.4:+2672575 | MS.gene60162:CDS |
| TGGTGCAGTATGATGTACCA+TGG | 0.715874 | 8.4:-2674217 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTGAAATATATATTAATAA+TGG | - | chr8.4:2671141-2671160 | None:intergenic | 10.0% |
| !! | ATGAAAATTCATTATTTAAA+AGG | - | chr8.4:2669830-2669849 | None:intergenic | 10.0% |
| !! | ATTAATAATAGTTGAAAATA+AGG | - | chr8.4:2669643-2669662 | None:intergenic | 10.0% |
| !! | CTGAAATATATATTAATAAT+GGG | - | chr8.4:2671140-2671159 | None:intergenic | 10.0% |
| !! | TAATAAAAAAAGTTAAATGT+GGG | + | chr8.4:2671347-2671366 | MS.gene60162:intron | 10.0% |
| !! | TAATAAAAAAAGTTAAATGT+GGG | - | chr8.4:2671366-2671347 | None:intergenic | 10.0% |
| !! | TAGAAAGTTTAAAAAAAAAA+AGG | - | chr8.4:2674049-2674068 | None:intergenic | 10.0% |
| !! | TTAATAAAAAAAGTTAAATG+TGG | + | chr8.4:2671346-2671365 | MS.gene60162:intron | 10.0% |
| !! | TTAATAAAAAAAGTTAAATG+TGG | - | chr8.4:2671365-2671346 | None:intergenic | 10.0% |
| !!! | ACTTTTTTTATTAAACATAA+CGG | + | chr8.4:2671552-2671571 | MS.gene60162:intron | 10.0% |
| !!! | ATTCATTTTAAAGATAAAAA+TGG | + | chr8.4:2673535-2673554 | MS.gene60162:intron | 10.0% |
| !!! | TAATCATTTTAAATTTTTGA+AGG | + | chr8.4:2670533-2670552 | MS.gene60162:intron | 10.0% |
| !! | AAAAAATAGTAAAGTAGTTA+AGG | - | chr8.4:2669507-2669526 | None:intergenic | 15.0% |
| !! | AAATAAAAACAAAAAAGACA+CGG | - | chr8.4:2672683-2672702 | None:intergenic | 15.0% |
| !! | ACAATCTTATATTAAAAGAA+TGG | + | chr8.4:2672884-2672903 | MS.gene60162:intron | 15.0% |
| !! | ACTACACAATTTATTAATTA+TGG | + | chr8.4:2673815-2673834 | MS.gene60162:intron | 15.0% |
| !! | AGAAAAACAAAAAAAATAGA+AGG | - | chr8.4:2671007-2671026 | None:intergenic | 15.0% |
| !! | ATAAAAAAAGATGAATTCAA+AGG | + | chr8.4:2671824-2671843 | MS.gene60162:intron | 15.0% |
| !! | GAAAAACAAAAAAAATAGAA+GGG | - | chr8.4:2671006-2671025 | None:intergenic | 15.0% |
| !! | GAAATTCAAAAATAAGTTAA+GGG | + | chr8.4:2671649-2671668 | MS.gene60162:intron | 15.0% |
| !! | GAAATTCAAAAATAAGTTAA+GGG | - | chr8.4:2671668-2671649 | None:intergenic | 15.0% |
| !! | TAAAAAAAATCAATGAAGAT+AGG | - | chr8.4:2673656-2673675 | None:intergenic | 15.0% |
| !! | TGAAATTCAAAAATAAGTTA+AGG | + | chr8.4:2671648-2671667 | MS.gene60162:intron | 15.0% |
| !! | TGAAATTCAAAAATAAGTTA+AGG | - | chr8.4:2671667-2671648 | None:intergenic | 15.0% |
| !! | TTATGGATAAATATAACATT+AGG | + | chr8.4:2673832-2673851 | MS.gene60162:intron | 15.0% |
| !!! | AAACTTTCAAATCTTTTATT+TGG | - | chr8.4:2675242-2675261 | None:intergenic | 15.0% |
| !!! | CTTATTTTTGAATTTCATTT+TGG | + | chr8.4:2671236-2671255 | MS.gene60162:intron | 15.0% |
| !!! | CTTATTTTTGAATTTCATTT+TGG | - | chr8.4:2671255-2671236 | None:intergenic | 15.0% |
| !!! | TCTATTTTTTTTGTTTTTCT+AGG | + | chr8.4:2671007-2671026 | MS.gene60162:intron | 15.0% |
| !!! | TTGTTTTTATTTCTTTTGTT+TGG | + | chr8.4:2672691-2672710 | MS.gene60162:intron | 15.0% |
| !!! | TTTTACATTCGTTTAATAAT+AGG | + | chr8.4:2673671-2673690 | MS.gene60162:intron | 15.0% |
| !!! | TTTTTTTTTAAACTTTCTAG+AGG | + | chr8.4:2674050-2674069 | MS.gene60162:intron | 15.0% |
| !! | AAAAAATACATTACCATTGA+GGG | - | chr8.4:2674317-2674336 | None:intergenic | 20.0% |
| !! | AAAGCAATAATATATGGATA+TGG | + | chr8.4:2672276-2672295 | MS.gene60162:CDS | 20.0% |
| !! | AACAATATAAAAACGTTTCA+AGG | - | chr8.4:2672341-2672360 | None:intergenic | 20.0% |
| !! | ACTATATATACATTAAAGCT+CGG | - | chr8.4:2672856-2672875 | None:intergenic | 20.0% |
| !! | ACTTTCTTCAAAAATCTAAT+TGG | - | chr8.4:2675539-2675558 | None:intergenic | 20.0% |
| !! | ATTATTAGAAAAAACAAGAC+AGG | - | chr8.4:2670468-2670487 | None:intergenic | 20.0% |
| !! | CAATTATGTATGAATGATAT+GGG | + | chr8.4:2669666-2669685 | MS.gene60162:intron | 20.0% |
| !! | TAAAATATGATCAGAGAAAA+TGG | + | chr8.4:2674547-2674566 | MS.gene60162:intron | 20.0% |
| !! | TAAACATAACGAAAAACTAA+CGG | - | chr8.4:2671329-2671348 | None:intergenic | 20.0% |
| !! | TAAGCATTAAAACATTTCTA+AGG | - | chr8.4:2674726-2674745 | None:intergenic | 20.0% |
| !! | TCTTTCACAAATGTAATATA+AGG | - | chr8.4:2674806-2674825 | None:intergenic | 20.0% |
| !! | TTTAATATAAGATTGTGAGT+GGG | - | chr8.4:2672880-2672899 | None:intergenic | 20.0% |
| !! | TTTATGTATTGAAGTAGAAT+TGG | + | chr8.4:2672817-2672836 | MS.gene60162:intron | 20.0% |
| !!! | AAATTATAGCTTGGTATTTT+CGG | - | chr8.4:2675026-2675045 | None:intergenic | 20.0% |
| !!! | ACTTTATATTTTTACTCTGT+TGG | + | chr8.4:2673777-2673796 | MS.gene60162:intron | 20.0% |
| !!! | ATCATTTTCAACAAACAAAT+TGG | + | chr8.4:2670871-2670890 | MS.gene60162:CDS | 20.0% |
| !!! | ATGACATTTTAGCTAATTAT+TGG | + | chr8.4:2675366-2675385 | MS.gene60162:intron | 20.0% |
| !!! | TATATTAATAATGGGTTTTC+AGG | - | chr8.4:2671132-2671151 | None:intergenic | 20.0% |
| !!! | TGTTTTTTCTAATAATTCCA+TGG | + | chr8.4:2670472-2670491 | MS.gene60162:intron | 20.0% |
| !!! | TTATATCGAAAAGTATGTTT+TGG | - | chr8.4:2675217-2675236 | None:intergenic | 20.0% |
| !!! | TTTTAACCTACTATAAGATA+TGG | - | chr8.4:2673162-2673181 | None:intergenic | 20.0% |
| !!! | TTTTAATATAAGATTGTGAG+TGG | - | chr8.4:2672881-2672900 | None:intergenic | 20.0% |
| !!! | TTTTATTAAACATAACGGAA+GGG | + | chr8.4:2671557-2671576 | MS.gene60162:intron | 20.0% |
| !!! | TTTTATTTCTTTTGTTTGGA+TGG | + | chr8.4:2672695-2672714 | MS.gene60162:intron | 20.0% |
| !!! | TTTTTATTAAACATAACGGA+AGG | + | chr8.4:2671556-2671575 | MS.gene60162:intron | 20.0% |
| ! | AAACACAGTCTAAATATTTG+GGG | - | chr8.4:2674109-2674128 | None:intergenic | 25.0% |
| ! | AAATTATAACCATCGTTTGT+AGG | - | chr8.4:2673000-2673019 | None:intergenic | 25.0% |
| ! | AAGAGATATTTAGAGGTAAA+TGG | - | chr8.4:2673191-2673210 | None:intergenic | 25.0% |
| ! | AAGTGAGAAAAAAACAAGAA+TGG | - | chr8.4:2670402-2670421 | None:intergenic | 25.0% |
| ! | AAGTTAATGAAATAGTCCTT+AGG | - | chr8.4:2672364-2672383 | None:intergenic | 25.0% |
| ! | AATTATAACCATCGTTTGTA+GGG | - | chr8.4:2672999-2673018 | None:intergenic | 25.0% |
| ! | ACATACAAATCCATAATTGA+TGG | + | chr8.4:2674661-2674680 | MS.gene60162:intron | 25.0% |
| ! | ACTTAAAGTTAACAATTCAC+AGG | - | chr8.4:2674779-2674798 | None:intergenic | 25.0% |
| ! | ATAAACTACGTGTAATATAG+TGG | - | chr8.4:2673031-2673050 | None:intergenic | 25.0% |
| ! | ATAAATCCATCCAAGAAAAT+TGG | + | chr8.4:2675057-2675076 | MS.gene60162:CDS | 25.0% |
| ! | ATAACTGAAACTTTATTCCT+AGG | - | chr8.4:2669936-2669955 | None:intergenic | 25.0% |
| ! | ATATTTCAGTAGCTTAATCA+AGG | + | chr8.4:2671151-2671170 | MS.gene60162:intron | 25.0% |
| ! | ATTATTGCTTTCCTCAAAAA+TGG | - | chr8.4:2672267-2672286 | None:intergenic | 25.0% |
| ! | CAAACACAGTCTAAATATTT+GGG | - | chr8.4:2674110-2674129 | None:intergenic | 25.0% |
| ! | CAACAAATTTAGTGACTTAA+GGG | - | chr8.4:2673075-2673094 | None:intergenic | 25.0% |
| ! | CATGATGTAATTAATACTGT+GGG | + | chr8.4:2674142-2674161 | MS.gene60162:intron | 25.0% |
| ! | CCACTATAGAAAAAGATAAT+AGG | - | chr8.4:2673348-2673367 | None:intergenic | 25.0% |
| ! | CCATTAATTATTTACAAGAC+TGG | + | chr8.4:2672562-2672581 | MS.gene60162:CDS | 25.0% |
| ! | CTAAATATCTCTTAATAGTC+TGG | + | chr8.4:2673198-2673217 | MS.gene60162:intron | 25.0% |
| ! | GAAAAAATACATTACCATTG+AGG | - | chr8.4:2674318-2674337 | None:intergenic | 25.0% |
| ! | GAATATGGACATTAATATCA+TGG | - | chr8.4:2674989-2675008 | None:intergenic | 25.0% |
| ! | GACACTAAAAAGTTAAATGT+GGG | - | chr8.4:2671452-2671471 | None:intergenic | 25.0% |
| ! | GACTATTAAGAGATATTTAG+AGG | - | chr8.4:2673198-2673217 | None:intergenic | 25.0% |
| ! | GCAATTATGTATGAATGATA+TGG | + | chr8.4:2669665-2669684 | MS.gene60162:intron | 25.0% |
| ! | GTAAAAAACATTTGATACCT+AGG | + | chr8.4:2669916-2669935 | MS.gene60162:CDS | 25.0% |
| ! | TAAATCATCTCTAATGATAC+AGG | + | chr8.4:2672187-2672206 | MS.gene60162:intron | 25.0% |
| ! | TAAATCCATCCAAGAAAATT+GGG | + | chr8.4:2675058-2675077 | MS.gene60162:CDS | 25.0% |
| ! | TAACCTGATAACATATTTAG+AGG | - | chr8.4:2673950-2673969 | None:intergenic | 25.0% |
| ! | TAATATAAGACTGCAAAAAG+TGG | - | chr8.4:2675153-2675172 | None:intergenic | 25.0% |
| ! | TAGACCAAATGAAATAAAGA+GGG | + | chr8.4:2672492-2672511 | MS.gene60162:CDS | 25.0% |
| ! | TATATGATTATTCTGTCTCT+AGG | + | chr8.4:2670376-2670395 | MS.gene60162:intron | 25.0% |
| ! | TATTTCAGTAGCTTAATCAA+GGG | + | chr8.4:2671152-2671171 | MS.gene60162:intron | 25.0% |
| ! | TCAAACACAGTCTAAATATT+TGG | - | chr8.4:2674111-2674130 | None:intergenic | 25.0% |
| ! | TCAACAAATTTAGTGACTTA+AGG | - | chr8.4:2673076-2673095 | None:intergenic | 25.0% |
| ! | TCACAGCTTAATTAAAATCA+TGG | + | chr8.4:2671188-2671207 | MS.gene60162:intron | 25.0% |
| ! | TCATGATGTAATTAATACTG+TGG | + | chr8.4:2674141-2674160 | MS.gene60162:intron | 25.0% |
| ! | TGACACTAAAAAGTTAAATG+TGG | - | chr8.4:2671453-2671472 | None:intergenic | 25.0% |
| ! | TTACATGAATGCTTTCAAAT+TGG | - | chr8.4:2673921-2673940 | None:intergenic | 25.0% |
| ! | TTAGACCAAATGAAATAAAG+AGG | + | chr8.4:2672491-2672510 | MS.gene60162:CDS | 25.0% |
| ! | TTCAAGTATTAAACAACTCA+AGG | + | chr8.4:2673574-2673593 | MS.gene60162:intron | 25.0% |
| ! | TTGAGGAAAGCAATAATATA+TGG | + | chr8.4:2672270-2672289 | MS.gene60162:CDS | 25.0% |
| ! | TTTGTTCTCAAATTCAAAAC+TGG | - | chr8.4:2669442-2669461 | None:intergenic | 25.0% |
| !! | AATTATAGCTTGGTATTTTC+GGG | - | chr8.4:2675025-2675044 | None:intergenic | 25.0% |
| !! | ACGTTTTTATATTGTTCCTA+AGG | + | chr8.4:2672345-2672364 | MS.gene60162:intron | 25.0% |
| !! | ATATCCATGTGTCTTATTAA+TGG | - | chr8.4:2674370-2674389 | None:intergenic | 25.0% |
| !! | CCAGTCTTGTAAATAATTAA+TGG | - | chr8.4:2672565-2672584 | None:intergenic | 25.0% |
| !! | CCTATTATCTTTTTCTATAG+TGG | + | chr8.4:2673345-2673364 | MS.gene60162:intron | 25.0% |
| !! | TAGTGTAAAATAAAGTGTCT+TGG | + | chr8.4:2673895-2673914 | MS.gene60162:intron | 25.0% |
| !! | TCTTTTAATGTAACATTGTC+TGG | - | chr8.4:2670062-2670081 | None:intergenic | 25.0% |
| !! | TTTGTCCTTTTTCCTTAATA+CGG | - | chr8.4:2674518-2674537 | None:intergenic | 25.0% |
| !!! | AATTAGTTTGCATCAAGATA+CGG | - | chr8.4:2672434-2672453 | None:intergenic | 25.0% |
| !!! | AATTTTCTTGGATGGATTTA+TGG | - | chr8.4:2675058-2675077 | None:intergenic | 25.0% |
| !!! | ATCATTAAGTTTTAGAACGT+AGG | + | chr8.4:2670154-2670173 | MS.gene60162:intron | 25.0% |
| !!! | ATGAGTGTTATTTTATTCTG+TGG | + | chr8.4:2674444-2674463 | MS.gene60162:intron | 25.0% |
| !!! | ATTTTCTTGGATGGATTTAT+GGG | - | chr8.4:2675057-2675076 | None:intergenic | 25.0% |
| !!! | TCATCTAGAAATTTTAACCA+TGG | - | chr8.4:2675350-2675369 | None:intergenic | 25.0% |
| !!! | TCATTAAGTTTTAGAACGTA+GGG | + | chr8.4:2670155-2670174 | MS.gene60162:intron | 25.0% |
| !!! | TTGGTATTATTTTGTTGTGT+TGG | + | chr8.4:2675385-2675404 | MS.gene60162:intron | 25.0% |
| !!! | TTTGTTGAGAACTTTTTTTG+AGG | + | chr8.4:2671388-2671407 | MS.gene60162:intron | 25.0% |
| !!! | TTTTTTCTTTCATTGCTCTT+TGG | + | chr8.4:2674419-2674438 | MS.gene60162:intron | 25.0% |
| AAAATCCAGTGACTGTTTAT+TGG | - | chr8.4:2672756-2672775 | None:intergenic | 30.0% | |
| AAATCCATCCAAGAAAATTG+GGG | + | chr8.4:2675059-2675078 | MS.gene60162:CDS | 30.0% | |
| AAATTGGTAGAAGACATTGT+TGG | + | chr8.4:2670887-2670906 | MS.gene60162:CDS | 30.0% | |
| AACAATATAAAACTATCCCC+TGG | + | chr8.4:2672907-2672926 | MS.gene60162:intron | 30.0% | |
| AACACAGTCTAAATATTTGG+GGG | - | chr8.4:2674108-2674127 | None:intergenic | 30.0% | |
| AAGAAGATGAATAGAATACC+AGG | - | chr8.4:2669484-2669503 | None:intergenic | 30.0% | |
| AAGATAATAGGATACTGTCT+TGG | - | chr8.4:2673336-2673355 | None:intergenic | 30.0% | |
| AAGATCTTGGACATATGATT+TGG | + | chr8.4:2670777-2670796 | MS.gene60162:intron | 30.0% | |
| AAGCCTCTAAATATGTTATC+AGG | + | chr8.4:2673944-2673963 | MS.gene60162:intron | 30.0% | |
| AATGTATGTTATAGACAGAC+TGG | + | chr8.4:2671056-2671075 | MS.gene60162:intron | 30.0% | |
| ACAAATCCATAATTGATGGA+TGG | + | chr8.4:2674665-2674684 | MS.gene60162:intron | 30.0% | |
| ACCATTGAATGCATTTATAG+CGG | - | chr8.4:2673411-2673430 | None:intergenic | 30.0% | |
| AGATAATAGGATACTGTCTT+GGG | - | chr8.4:2673335-2673354 | None:intergenic | 30.0% | |
| AGATCTTGGACATATGATTT+GGG | + | chr8.4:2670778-2670797 | MS.gene60162:intron | 30.0% | |
| AGCAGTAACGAGTAATTATA+AGG | - | chr8.4:2670722-2670741 | None:intergenic | 30.0% | |
| ATAAACGGAGAGATACTTAA+GGG | + | chr8.4:2671589-2671608 | MS.gene60162:intron | 30.0% | |
| ATAACGAAAAACTAACGGAA+GGG | - | chr8.4:2671324-2671343 | None:intergenic | 30.0% | |
| ATAAGAAAATCCACCTTCTT+AGG | - | chr8.4:2670101-2670120 | None:intergenic | 30.0% | |
| ATGCTTCATGAAAGAAATGA+GGG | + | chr8.4:2675114-2675133 | MS.gene60162:intron | 30.0% | |
| ATGTACACAACTATGCTATA+AGG | - | chr8.4:2670275-2670294 | None:intergenic | 30.0% | |
| ATTTACAAGACTGGAATCAT+GGG | + | chr8.4:2672571-2672590 | MS.gene60162:CDS | 30.0% | |
| CATGTGATTCTGATATATGA+GGG | - | chr8.4:2671932-2671951 | None:intergenic | 30.0% | |
| CATTCAAAAACTCAGAAGAA+TGG | + | chr8.4:2674247-2674266 | MS.gene60162:CDS | 30.0% | |
| CTAACTAAACTCTAATTCCA+TGG | + | chr8.4:2675330-2675349 | MS.gene60162:intron | 30.0% | |
| CTTGATATAACTCGCAAATT+AGG | + | chr8.4:2671777-2671796 | MS.gene60162:intron | 30.0% | |
| GAAAAGAAGTCAGAATATAG+CGG | - | chr8.4:2674944-2674963 | None:intergenic | 30.0% | |
| GAGTTATATCAAGTACACAT+TGG | - | chr8.4:2671770-2671789 | None:intergenic | 30.0% | |
| GATGCAAACTAATTTCTTTC+AGG | + | chr8.4:2672440-2672459 | MS.gene60162:intron | 30.0% | |
| GTAATTCTTTGCCAAAAGTA+TGG | - | chr8.4:2670426-2670445 | None:intergenic | 30.0% | |
| GTGATTCCATATCTTATAGT+AGG | + | chr8.4:2673153-2673172 | MS.gene60162:intron | 30.0% | |
| TAATTTATCCATATGAGCCA+TGG | + | chr8.4:2670930-2670949 | MS.gene60162:CDS | 30.0% | |
| TATGCTTCATGAAAGAAATG+AGG | + | chr8.4:2675113-2675132 | MS.gene60162:intron | 30.0% | |
| TATTTACAAGACTGGAATCA+TGG | + | chr8.4:2672570-2672589 | MS.gene60162:CDS | 30.0% | |
| TCATTTATGCATTTGTTCCT+AGG | - | chr8.4:2671889-2671908 | None:intergenic | 30.0% | |
| TCGAGAATGTTTACTATCTA+CGG | + | chr8.4:2674574-2674593 | MS.gene60162:intron | 30.0% | |
| TGCAAAAACAAACATGTAAG+CGG | + | chr8.4:2670976-2670995 | MS.gene60162:intron | 30.0% | |
| TGGATAAATTAGTGGCAAAA+AGG | - | chr8.4:2670921-2670940 | None:intergenic | 30.0% | |
| TTCTCCTAAATAACACTTTC+TGG | + | chr8.4:2670211-2670230 | MS.gene60162:intron | 30.0% | |
| TTTAAAGAGTAATCAGTCAC+TGG | + | chr8.4:2672782-2672801 | MS.gene60162:intron | 30.0% | |
| TTTAGGCTTAATACATGCTT+TGG | - | chr8.4:2671676-2671695 | None:intergenic | 30.0% | |
| TTTGAAGAAATCATGAGAAG+GGG | - | chr8.4:2674879-2674898 | None:intergenic | 30.0% | |
| ! | ACTTTGAAGAAATCATGAGA+AGG | - | chr8.4:2674881-2674900 | None:intergenic | 30.0% |
| ! | ATATAGCGGTTAGTCAATAT+TGG | - | chr8.4:2674930-2674949 | None:intergenic | 30.0% |
| ! | ATTATAGCTTGGTATTTTCG+GGG | - | chr8.4:2675024-2675043 | None:intergenic | 30.0% |
| ! | ATTGAGACAGTTTAGAGTTA+AGG | + | chr8.4:2671617-2671636 | MS.gene60162:intron | 30.0% |
| ! | ATTGAGACAGTTTAGAGTTA+AGG | - | chr8.4:2671636-2671617 | None:intergenic | 30.0% |
| ! | CAAACTAATTTCTTTCAGGT+TGG | + | chr8.4:2672444-2672463 | MS.gene60162:intron | 30.0% |
| ! | CATTCTTCTGAGTTTTTGAA+TGG | - | chr8.4:2674249-2674268 | None:intergenic | 30.0% |
| ! | CTTTGAAGAAATCATGAGAA+GGG | - | chr8.4:2674880-2674899 | None:intergenic | 30.0% |
| ! | GAAAATTTAGAGCAAGATGA+GGG | + | chr8.4:2672952-2672971 | MS.gene60162:intron | 30.0% |
| ! | GGCATCTCATTAATGATTTT+AGG | - | chr8.4:2671693-2671712 | None:intergenic | 30.0% |
| ! | TTATGTTTTACCAAACCGTT+AGG | + | chr8.4:2673980-2673999 | MS.gene60162:intron | 30.0% |
| ! | TTCACCCTCTTTATTTCATT+TGG | - | chr8.4:2672499-2672518 | None:intergenic | 30.0% |
| ! | TTGAGACAGTTTAGAGTTAA+GGG | + | chr8.4:2671618-2671637 | MS.gene60162:intron | 30.0% |
| ! | TTGAGACAGTTTAGAGTTAA+GGG | - | chr8.4:2671637-2671618 | None:intergenic | 30.0% |
| ! | TTTCTCACTTTCCATACTTT+TGG | + | chr8.4:2670412-2670431 | MS.gene60162:intron | 30.0% |
| !! | AACGGTTTGGTAAAACATAA+AGG | - | chr8.4:2673980-2673999 | None:intergenic | 30.0% |
| !! | AGATTGATGATGTTAAAGCA+TGG | + | chr8.4:2670562-2670581 | MS.gene60162:CDS | 30.0% |
| !! | AGCATGATAACGTATTTTTC+AGG | - | chr8.4:2674011-2674030 | None:intergenic | 30.0% |
| !! | TATCGAAAAGTATGTTTTGG+TGG | - | chr8.4:2675214-2675233 | None:intergenic | 30.0% |
| !! | TCATCTTGCTCTAAATTTTC+CGG | - | chr8.4:2672952-2672971 | None:intergenic | 30.0% |
| !!! | ATTTTTCAGGTACAACCTAA+CGG | - | chr8.4:2673998-2674017 | None:intergenic | 30.0% |
| AAAGAGGGTGAAGATAAGTT+TGG | + | chr8.4:2672507-2672526 | MS.gene60162:CDS | 35.0% | |
| AAATTGAAGTCTGAACACCA+TGG | - | chr8.4:2670492-2670511 | None:intergenic | 35.0% | |
| AACTCGCAAATTAGGAACAA+TGG | + | chr8.4:2671785-2671804 | MS.gene60162:intron | 35.0% | |
| AAGAGATTTACATGGACATC+GGG | - | chr8.4:2674755-2674774 | None:intergenic | 35.0% | |
| AAGGATACCTCTTAGACATA+TGG | - | chr8.4:2674168-2674187 | None:intergenic | 35.0% | |
| AATAGAATACCAGGTGAGTA+AGG | - | chr8.4:2669475-2669494 | None:intergenic | 35.0% | |
| AATGCATGAAGTGTGAAACT+TGG | + | chr8.4:2671094-2671113 | MS.gene60162:intron | 35.0% | |
| AATGCATTTATAGCGGCTAT+AGG | - | chr8.4:2673404-2673423 | None:intergenic | 35.0% | |
| ACACAGTCTAAATATTTGGG+GGG | - | chr8.4:2674107-2674126 | None:intergenic | 35.0% | |
| ACACATTTAACAGAACGATG+TGG | - | chr8.4:2671714-2671733 | None:intergenic | 35.0% | |
| AGAATGTTTACTATCTACGG+TGG | + | chr8.4:2674577-2674596 | MS.gene60162:intron | 35.0% | |
| ATATATGAGGGAGAGAGAAT+AGG | - | chr8.4:2671920-2671939 | None:intergenic | 35.0% | |
| ATATGTCCAAGATCTTCAAG+AGG | - | chr8.4:2670773-2670792 | None:intergenic | 35.0% | |
| ATGCATTTATAGCGGCTATA+GGG | - | chr8.4:2673403-2673422 | None:intergenic | 35.0% | |
| ATTACACTAACCAGACAGAA+AGG | + | chr8.4:2670441-2670460 | MS.gene60162:intron | 35.0% | |
| ATTCAAAGGCTCTACAACAA+AGG | + | chr8.4:2671838-2671857 | MS.gene60162:intron | 35.0% | |
| CAAGAGATTTACATGGACAT+CGG | - | chr8.4:2674756-2674775 | None:intergenic | 35.0% | |
| CATAACGAAAAACTAACGGA+AGG | - | chr8.4:2671325-2671344 | None:intergenic | 35.0% | |
| CATAGGAGCAACAATAAAGA+GGG | - | chr8.4:2673285-2673304 | None:intergenic | 35.0% | |
| CATCTATGATTGAGAGCAAA+AGG | - | chr8.4:2674187-2674206 | None:intergenic | 35.0% | |
| CATGTTAGGAGAATACTCAT+AGG | - | chr8.4:2673302-2673321 | None:intergenic | 35.0% | |
| CATTACTTCTCTTCCTAAGA+AGG | + | chr8.4:2670085-2670104 | MS.gene60162:CDS | 35.0% | |
| CCATGTGATTCTGATATATG+AGG | - | chr8.4:2671933-2671952 | None:intergenic | 35.0% | |
| CCTCATATATCAGAATCACA+TGG | + | chr8.4:2671930-2671949 | MS.gene60162:intron | 35.0% | |
| CTAATTGGACGAGATTCTTT+AGG | - | chr8.4:2675524-2675543 | None:intergenic | 35.0% | |
| CTGCAAAAAGTGGAAGAAAA+TGG | - | chr8.4:2675143-2675162 | None:intergenic | 35.0% | |
| CTTCTTGGGTAAGGATATTA+AGG | + | chr8.4:2670242-2670261 | MS.gene60162:intron | 35.0% | |
| GAGATACCATCCATCAATTA+TGG | - | chr8.4:2674674-2674693 | None:intergenic | 35.0% | |
| GATAAACGGAGAGATACTTA+AGG | + | chr8.4:2671588-2671607 | MS.gene60162:intron | 35.0% | |
| GATAATAGGATACTGTCTTG+GGG | - | chr8.4:2673334-2673353 | None:intergenic | 35.0% | |
| GGAAAAACAGTATCTGAATG+AGG | + | chr8.4:2675406-2675425 | MS.gene60162:intron | 35.0% | |
| GGCTCATATGGATAAATTAG+TGG | - | chr8.4:2670929-2670948 | None:intergenic | 35.0% | |
| GTAAACGGAGAGATACTTAA+GGG | - | chr8.4:2671292-2671311 | None:intergenic | 35.0% | |
| GTCCTATAACAAAGAACTGT+GGG | - | chr8.4:2670835-2670854 | None:intergenic | 35.0% | |
| TATCTAGCCTAAAAGGTGAT+GGG | + | chr8.4:2669865-2669884 | MS.gene60162:CDS | 35.0% | |
| TATCTCTCCGTTTATCAAAG+TGG | - | chr8.4:2671584-2671603 | None:intergenic | 35.0% | |
| TCATAGGAGCAACAATAAAG+AGG | - | chr8.4:2673286-2673305 | None:intergenic | 35.0% | |
| TCATGATTTCTTCAAAGTGC+AGG | + | chr8.4:2674883-2674902 | MS.gene60162:intron | 35.0% | |
| TCATGGCTTAATACATGCTT+TGG | + | chr8.4:2671205-2671224 | MS.gene60162:intron | 35.0% | |
| TCATGGGATGGATAAAATTC+TGG | + | chr8.4:2672587-2672606 | MS.gene60162:CDS | 35.0% | |
| TCCTATAACAAAGAACTGTG+GGG | - | chr8.4:2670834-2670853 | None:intergenic | 35.0% | |
| TGTCCTATAACAAAGAACTG+TGG | - | chr8.4:2670836-2670855 | None:intergenic | 35.0% | |
| TGTCTAAGTATGTGCTTCAT+AGG | + | chr8.4:2669802-2669821 | MS.gene60162:intron | 35.0% | |
| TTATAGTGAAGACGACCTAT+AGG | - | chr8.4:2673378-2673397 | None:intergenic | 35.0% | |
| TTATCTAGCCTAAAAGGTGA+TGG | + | chr8.4:2669864-2669883 | MS.gene60162:CDS | 35.0% | |
| TTCAATTCTTGCTCATCTTG+TGG | + | chr8.4:2669538-2669557 | MS.gene60162:intron | 35.0% | |
| TTGCACCGTATTAAGGAAAA+AGG | + | chr8.4:2674510-2674529 | MS.gene60162:intron | 35.0% | |
| TTTAGGAGCAACTTCATCAA+AGG | - | chr8.4:2675507-2675526 | None:intergenic | 35.0% | |
| TTTGCATTTGCACCGTATTA+AGG | + | chr8.4:2674503-2674522 | MS.gene60162:intron | 35.0% | |
| ! | ATGTCATGTTTTGTAGTGTC+AGG | + | chr8.4:2670126-2670145 | MS.gene60162:intron | 35.0% |
| ! | GAATTTTCATTCTGTGTCAC+AGG | + | chr8.4:2669840-2669859 | MS.gene60162:intron | 35.0% |
| ! | GAGTTTTTGAATGGTATGTG+TGG | - | chr8.4:2674240-2674259 | None:intergenic | 35.0% |
| ! | GGAAAATTTAGAGCAAGATG+AGG | + | chr8.4:2672951-2672970 | MS.gene60162:intron | 35.0% |
| ! | GTCTGGTCTATAGTTTTTCT+TGG | + | chr8.4:2673215-2673234 | MS.gene60162:intron | 35.0% |
| ! | GTGCTGAAAGTGTAAAATTC+AGG | + | chr8.4:2672060-2672079 | MS.gene60162:intron | 35.0% |
| ! | GTTTTCGCCTTTATAGCAAT+TGG | + | chr8.4:2672535-2672554 | MS.gene60162:CDS | 35.0% |
| ! | TAAAATTCTGGTTGATGCCA+TGG | + | chr8.4:2672599-2672618 | MS.gene60162:CDS | 35.0% |
| ! | TAATTGATGGATGGTATCTC+AGG | + | chr8.4:2674674-2674693 | MS.gene60162:intron | 35.0% |
| ! | TATAGTGGAAGCTATCCTAT+AGG | + | chr8.4:2673360-2673379 | MS.gene60162:intron | 35.0% |
| ! | TTACCTTTCCCCAATTTTCT+TGG | - | chr8.4:2675070-2675089 | None:intergenic | 35.0% |
| ! | TTCTGACTTCTTTTCTGTAC+AGG | + | chr8.4:2674949-2674968 | MS.gene60162:intron | 35.0% |
| ! | TTCTGGTGTGTTTTCTTCTT+GGG | + | chr8.4:2670228-2670247 | MS.gene60162:intron | 35.0% |
| !! | CACACCAGAAAGTGTTATTT+AGG | - | chr8.4:2670218-2670237 | None:intergenic | 35.0% |
| !! | GTGATGGGTTAATCCATAAA+GGG | + | chr8.4:2669880-2669899 | MS.gene60162:CDS | 35.0% |
| !! | TTGAGTCAAGTCCATTTTTG+AGG | + | chr8.4:2672253-2672272 | MS.gene60162:CDS | 35.0% |
| !! | TTGGTATTTTCGGGGATATA+TGG | - | chr8.4:2675016-2675035 | None:intergenic | 35.0% |
| !! | TTTCTGGTGTGTTTTCTTCT+TGG | + | chr8.4:2670227-2670246 | MS.gene60162:intron | 35.0% |
| ACAGGCTTATCTAGCCTAAA+AGG | + | chr8.4:2669858-2669877 | MS.gene60162:intron | 40.0% | |
| ACAGTCTAAATATTTGGGGG+GGG | - | chr8.4:2674105-2674124 | None:intergenic | 40.0% | |
| AGAAGACATTGTTGGAACTC+TGG | + | chr8.4:2670895-2670914 | MS.gene60162:CDS | 40.0% | |
| AGTATCTGAATGAGGCTAGT+TGG | + | chr8.4:2675414-2675433 | MS.gene60162:intron | 40.0% | |
| AGTATTCGTGCTTCGTAGAA+AGG | - | chr8.4:2669694-2669713 | None:intergenic | 40.0% | |
| AGTTTCAGTTATACGAGCTG+TGG | + | chr8.4:2669944-2669963 | MS.gene60162:CDS | 40.0% | |
| ATAGACATCCAGCAACGAAA+TGG | - | chr8.4:2672303-2672322 | None:intergenic | 40.0% | |
| ATAGATGAGCACTTTCACCA+TGG | + | chr8.4:2674200-2674219 | MS.gene60162:intron | 40.0% | |
| ATGTCTATAGCTCACTGGTA+TGG | + | chr8.4:2672315-2672334 | MS.gene60162:intron | 40.0% | |
| CACAGTCTAAATATTTGGGG+GGG | - | chr8.4:2674106-2674125 | None:intergenic | 40.0% | |
| CATCCAAGAAAATTGGGGAA+AGG | + | chr8.4:2675064-2675083 | MS.gene60162:CDS | 40.0% | |
| CCATATGGAAAGTCTATACG+AGG | - | chr8.4:2672016-2672035 | None:intergenic | 40.0% | |
| CCTCGTATAGACTTTCCATA+TGG | + | chr8.4:2672013-2672032 | MS.gene60162:intron | 40.0% | |
| CGTATAGACTTTCCATATGG+CGG | + | chr8.4:2672016-2672035 | MS.gene60162:intron | 40.0% | |
| CTAATGCATGCAATGCAATG+TGG | + | chr8.4:2669616-2669635 | MS.gene60162:intron | 40.0% | |
| CTATATCCTCAGTGCATACA+TGG | - | chr8.4:2672141-2672160 | None:intergenic | 40.0% | |
| CTCGCCATTAATAAGACACA+TGG | + | chr8.4:2674363-2674382 | MS.gene60162:intron | 40.0% | |
| CTTCTCTCTCTCATAAAGTG+CGG | - | chr8.4:2670335-2670354 | None:intergenic | 40.0% | |
| GAAGGGACCACTTTGATAAA+CGG | + | chr8.4:2671574-2671593 | MS.gene60162:intron | 40.0% | |
| GCCGCTATAAATGCATTCAA+TGG | + | chr8.4:2673407-2673426 | MS.gene60162:intron | 40.0% | |
| GCTGCTCGTAAATTATAGCT+TGG | - | chr8.4:2675035-2675054 | None:intergenic | 40.0% | |
| GGGATATATGGTGTGGAATA+TGG | - | chr8.4:2675004-2675023 | None:intergenic | 40.0% | |
| GGTAAACGGAGAGATACTTA+AGG | - | chr8.4:2671293-2671312 | None:intergenic | 40.0% | |
| GGTTAATCCATAAAGGGTTC+AGG | + | chr8.4:2669886-2669905 | MS.gene60162:CDS | 40.0% | |
| GGTTGAAAGAAGATACTGCT+TGG | + | chr8.4:2672208-2672227 | MS.gene60162:intron | 40.0% | |
| GGTTTGCGAAATTAACTCGA+TGG | + | chr8.4:2674904-2674923 | MS.gene60162:intron | 40.0% | |
| TACTTCTCTTCCTAAGAAGG+TGG | + | chr8.4:2670088-2670107 | MS.gene60162:intron | 40.0% | |
| TATCTCTCCGTTTACCAAAG+TGG | + | chr8.4:2671297-2671316 | MS.gene60162:intron | 40.0% | |
| TCACAGGCAAGAGATTTACA+TGG | - | chr8.4:2674763-2674782 | None:intergenic | 40.0% | |
| TCAGAATCACATGGAATCCA+TGG | + | chr8.4:2671939-2671958 | MS.gene60162:intron | 40.0% | |
| TCGCCTTTATAGCAATTGGA+TGG | + | chr8.4:2672539-2672558 | MS.gene60162:CDS | 40.0% | |
| TCTTCTCCTCTTGAAGATCT+TGG | + | chr8.4:2670764-2670783 | MS.gene60162:intron | 40.0% | |
| TGCATTTATAGCGGCTATAG+GGG | - | chr8.4:2673402-2673421 | None:intergenic | 40.0% | |
| TGGCCATCCAATTGCTATAA+AGG | - | chr8.4:2672545-2672564 | None:intergenic | 40.0% | |
| TTAAATCGCCATGGCTCATA+TGG | - | chr8.4:2670941-2670960 | None:intergenic | 40.0% | |
| TTGTCATGCTTAAATCGCCA+TGG | - | chr8.4:2670950-2670969 | None:intergenic | 40.0% | |
| TTTGATGCCTGAACCCTTTA+TGG | - | chr8.4:2669896-2669915 | None:intergenic | 40.0% | |
| ! | CTTTCCCCAATTTTCTTGGA+TGG | - | chr8.4:2675066-2675085 | None:intergenic | 40.0% |
| ! | GGATTAACCCATCACCTTTT+AGG | - | chr8.4:2669875-2669894 | None:intergenic | 40.0% |
| ! | GTGTGTTTTCTTCTTGGGTA+AGG | + | chr8.4:2670233-2670252 | MS.gene60162:intron | 40.0% |
| ! | TCAAATTCAAAACTGGCCTC+TGG | - | chr8.4:2669435-2669454 | None:intergenic | 40.0% |
| ! | TGAATGAGGCTAGTTGGAAT+TGG | + | chr8.4:2675420-2675439 | MS.gene60162:CDS | 40.0% |
| !! | ATTTTCGGGGATATATGGTG+TGG | - | chr8.4:2675011-2675030 | None:intergenic | 40.0% |
| !! | GGTGATGGGTTAATCCATAA+AGG | + | chr8.4:2669879-2669898 | MS.gene60162:CDS | 40.0% |
| !! | TATTGGCTTCGTCTCTATCT+AGG | - | chr8.4:2672739-2672758 | None:intergenic | 40.0% |
| !! | TTATGATTTCTAAAGCGCCC+TGG | + | chr8.4:2670628-2670647 | MS.gene60162:CDS | 40.0% |
| !!! | CGCTATGGTTTTGAGCAAAT+TGG | + | chr8.4:2670026-2670045 | MS.gene60162:CDS | 40.0% |
| AAACAACTAGCTGAGCGCTA+TGG | + | chr8.4:2670011-2670030 | MS.gene60162:CDS | 45.0% | |
| AATAAAGAGGGCTGACCAGA+TGG | - | chr8.4:2673273-2673292 | None:intergenic | 45.0% | |
| AATAGGATACTGTCTTGGGG+TGG | - | chr8.4:2673331-2673350 | None:intergenic | 45.0% | |
| ACAAGACTGGAATCATGGGA+TGG | + | chr8.4:2672575-2672594 | MS.gene60162:CDS | 45.0% | |
| ACCATCGTTTGTAGGGAATC+AGG | - | chr8.4:2672992-2673011 | None:intergenic | 45.0% | |
| ATACGAGGAGAAAGACAGCA+GGG | - | chr8.4:2672001-2672020 | None:intergenic | 45.0% | |
| ATAGAAGCAACTCCGCCATA+TGG | - | chr8.4:2672031-2672050 | None:intergenic | 45.0% | |
| ATAGGATACTGTCTTGGGGT+GGG | - | chr8.4:2673330-2673349 | None:intergenic | 45.0% | |
| ATGCTTTATCGCACAAGGTG+AGG | + | chr8.4:2673105-2673124 | MS.gene60162:intron | 45.0% | |
| ATGGTTGGGCTATCACTTCT+GGG | + | chr8.4:2672618-2672637 | MS.gene60162:CDS | 45.0% | |
| ATTTCTGCTCCTTACTCACC+TGG | + | chr8.4:2669463-2669482 | MS.gene60162:CDS | 45.0% | |
| CACAGACAAATCTGCATGAC+TGG | - | chr8.4:2675273-2675292 | None:intergenic | 45.0% | |
| CAGTCTAAATATTTGGGGGG+GGG | - | chr8.4:2674104-2674123 | None:intergenic | 45.0% | |
| CCATCGTTTGTAGGGAATCA+GGG | - | chr8.4:2672991-2673010 | None:intergenic | 45.0% | |
| CGAAGCCAATAAACAGTCAC+TGG | + | chr8.4:2672748-2672767 | MS.gene60162:intron | 45.0% | |
| CGCACTTTATGAGAGAGAGA+AGG | + | chr8.4:2670333-2670352 | MS.gene60162:intron | 45.0% | |
| GAACGCGTGTACATTGGAAA+AGG | - | chr8.4:2671742-2671761 | None:intergenic | 45.0% | |
| GAAGGGACCACTTTGGTAAA+CGG | - | chr8.4:2671307-2671326 | None:intergenic | 45.0% | |
| GAGAAGATCTGTCGAGAGAT+AGG | - | chr8.4:2670751-2670770 | None:intergenic | 45.0% | |
| GAGAATAGTGCAACACCTAC+AGG | - | chr8.4:2673251-2673270 | None:intergenic | 45.0% | |
| GATATGGTCCATTTCGTTGC+TGG | + | chr8.4:2672292-2672311 | MS.gene60162:CDS | 45.0% | |
| GCACGAATACTCCTCAGATT+AGG | + | chr8.4:2669703-2669722 | MS.gene60162:intron | 45.0% | |
| GTGTTGCACTATTCTCCATC+TGG | + | chr8.4:2673255-2673274 | MS.gene60162:intron | 45.0% | |
| GTTAGTTAGCGAAGAGTCCA+TGG | - | chr8.4:2671959-2671978 | None:intergenic | 45.0% | |
| TAGCATCCATGTATGCACTG+AGG | + | chr8.4:2672132-2672151 | MS.gene60162:intron | 45.0% | |
| TATACGAGCTGTGGCAATTC+CGG | + | chr8.4:2669953-2669972 | MS.gene60162:CDS | 45.0% | |
| TATACGAGGAGAAAGACAGC+AGG | - | chr8.4:2672002-2672021 | None:intergenic | 45.0% | |
| TATGAGGGAGAGAGAATAGG+TGG | - | chr8.4:2671917-2671936 | None:intergenic | 45.0% | |
| TCAAACTCATCCTGCCAAAC+AGG | - | chr8.4:2672237-2672256 | None:intergenic | 45.0% | |
| TCACCTTGTGCGATAAAGCA+TGG | - | chr8.4:2673106-2673125 | None:intergenic | 45.0% | |
| TCAGGTACAACCTAACGGTT+TGG | - | chr8.4:2673993-2674012 | None:intergenic | 45.0% | |
| TGGTGCAGTATGATGTACCA+TGG | - | chr8.4:2674220-2674239 | None:intergenic | 45.0% | |
| TTCACTGTGCTTACCCTCAA+TGG | + | chr8.4:2674301-2674320 | MS.gene60162:CDS | 45.0% | |
| ! | ATTCTGGTTGATGCCATGGT+TGG | + | chr8.4:2672603-2672622 | MS.gene60162:CDS | 45.0% |
| ! | GCCCCACAGTTCTTTGTTAT+AGG | + | chr8.4:2670830-2670849 | MS.gene60162:intron | 45.0% |
| ! | GTATCTACTTCCTCTGGCTT+GGG | + | chr8.4:2670650-2670669 | MS.gene60162:CDS | 45.0% |
| ! | TTCTGGTTGATGCCATGGTT+GGG | + | chr8.4:2672604-2672623 | MS.gene60162:CDS | 45.0% |
| !!! | AAATATAATGATTTTATTAA+AGG | + | chr8.4:2673866-2673885 | MS.gene60162:intron | 5.0% |
| !!! | ATTTTTATAAAAGTAAAAAA+TGG | + | chr8.4:2673049-2673068 | MS.gene60162:intron | 5.0% |
| AAGATGAGGGAGTTCAGCAG+GGG | + | chr8.4:2672965-2672984 | MS.gene60162:intron | 50.0% | |
| ACCAGGACACACCTAATCTG+AGG | - | chr8.4:2669717-2669736 | None:intergenic | 50.0% | |
| ACTAACGGAAGGGACCACTT+TGG | - | chr8.4:2671314-2671333 | None:intergenic | 50.0% | |
| AGCATACAACGCATGCAACC+AGG | - | chr8.4:2672928-2672947 | None:intergenic | 50.0% | |
| AGCCAGAGGAAGTAGATACC+AGG | - | chr8.4:2670649-2670668 | None:intergenic | 50.0% | |
| ATACTGCTTGGCAGCCTGTT+TGG | + | chr8.4:2672220-2672239 | MS.gene60162:CDS | 50.0% | |
| ATCCAGAGTCACAGTCTCCT+AGG | + | chr8.4:2671869-2671888 | MS.gene60162:intron | 50.0% | |
| CAAGACAGGTCCTTTCTGTC+TGG | - | chr8.4:2670454-2670473 | None:intergenic | 50.0% | |
| CAAGATGAGGGAGTTCAGCA+GGG | + | chr8.4:2672964-2672983 | MS.gene60162:intron | 50.0% | |
| CAGAAGTGATAGCCCAACCA+TGG | - | chr8.4:2672619-2672638 | None:intergenic | 50.0% | |
| CAGCCATGCTTTATCGCACA+AGG | + | chr8.4:2673100-2673119 | MS.gene60162:intron | 50.0% | |
| CATACAACGCATGCAACCAG+GGG | - | chr8.4:2672926-2672945 | None:intergenic | 50.0% | |
| CATGGTTGGGCTATCACTTC+TGG | + | chr8.4:2672617-2672636 | MS.gene60162:CDS | 50.0% | |
| CCCTGATTCCCTACAAACGA+TGG | + | chr8.4:2672988-2673007 | MS.gene60162:intron | 50.0% | |
| CTGTGGGCCATATGTCTAAG+AGG | + | chr8.4:2674158-2674177 | MS.gene60162:intron | 50.0% | |
| CTGTGGGGCAAAAACGAAAG+AGG | - | chr8.4:2670819-2670838 | None:intergenic | 50.0% | |
| CTTGGTCTCTCTCTACCTGT+AGG | + | chr8.4:2673233-2673252 | MS.gene60162:intron | 50.0% | |
| GACAGAGAACGCGTGTACAT+TGG | - | chr8.4:2671748-2671767 | None:intergenic | 50.0% | |
| GACAGGAACTGCTGTAACTG+GGG | + | chr8.4:2670677-2670696 | MS.gene60162:CDS | 50.0% | |
| GATTAGGTGTGTCCTGGTGT+CGG | + | chr8.4:2669719-2669738 | MS.gene60162:intron | 50.0% | |
| GCATACAACGCATGCAACCA+GGG | - | chr8.4:2672927-2672946 | None:intergenic | 50.0% | |
| GCCAGAGGAAGTAGATACCA+GGG | - | chr8.4:2670648-2670667 | None:intergenic | 50.0% | |
| GCTGCACAAGCACAGCTTAA+TGG | + | chr8.4:2674273-2674292 | MS.gene60162:CDS | 50.0% | |
| GCTGGATGTCTATAGCTCAC+TGG | + | chr8.4:2672310-2672329 | MS.gene60162:CDS | 50.0% | |
| GGACAGGAACTGCTGTAACT+GGG | + | chr8.4:2670676-2670695 | MS.gene60162:CDS | 50.0% | |
| GGTATCTACTTCCTCTGGCT+TGG | + | chr8.4:2670649-2670668 | MS.gene60162:CDS | 50.0% | |
| TCCTCAGATTAGGTGTGTCC+TGG | + | chr8.4:2669713-2669732 | MS.gene60162:intron | 50.0% | |
| TGGACAGGAACTGCTGTAAC+TGG | + | chr8.4:2670675-2670694 | MS.gene60162:CDS | 50.0% | |
| TGTCGATAGTATCCGACACC+AGG | - | chr8.4:2669734-2669753 | None:intergenic | 50.0% | |
| TTCCTAGGAGACTGTGACTC+TGG | - | chr8.4:2671874-2671893 | None:intergenic | 50.0% | |
| TTGCATGCGTTGTATGCTGC+CGG | + | chr8.4:2672930-2672949 | MS.gene60162:intron | 50.0% | |
| AAAGACAGCAGGGCCAGAAG+GGG | - | chr8.4:2671991-2672010 | None:intergenic | 55.0% | |
| ACCAGCTCCAGTGGAAAGTG+CGG | + | chr8.4:2669980-2669999 | MS.gene60162:CDS | 55.0% | |
| AGAAAGACAGCAGGGCCAGA+AGG | - | chr8.4:2671993-2672012 | None:intergenic | 55.0% | |
| AGGGAGAGAGAATAGGTGGC+TGG | - | chr8.4:2671913-2671932 | None:intergenic | 55.0% | |
| CATAAGAAGCCCCAGCGCAT+AGG | - | chr8.4:2670613-2670632 | None:intergenic | 55.0% | |
| CTGTACTCCGCACTTTCCAC+TGG | - | chr8.4:2669990-2670009 | None:intergenic | 55.0% | |
| GAAAGACAGCAGGGCCAGAA+GGG | - | chr8.4:2671992-2672011 | None:intergenic | 55.0% | |
| GATACTGTCTTGGGGTGGGT+TGG | - | chr8.4:2673326-2673345 | None:intergenic | 55.0% | |
| GCAAGATGAGGGAGTTCAGC+AGG | + | chr8.4:2672963-2672982 | MS.gene60162:intron | 55.0% | |
| GCCCTGGTATCTACTTCCTC+TGG | + | chr8.4:2670644-2670663 | MS.gene60162:CDS | 55.0% | |
| GGGAGAGAGAATAGGTGGCT+GGG | - | chr8.4:2671912-2671931 | None:intergenic | 55.0% | |
| TAACTAGCCGTCTCCCCTTC+TGG | + | chr8.4:2671975-2671994 | MS.gene60162:intron | 55.0% | |
| ! | ATCTGCCACTTCCTATGCGC+TGG | + | chr8.4:2670599-2670618 | MS.gene60162:CDS | 55.0% |
| ! | TCTGCCACTTCCTATGCGCT+GGG | + | chr8.4:2670600-2670619 | MS.gene60162:CDS | 55.0% |
| !! | TACTTCCTCTGGCTTGGGCT+TGG | + | chr8.4:2670655-2670674 | MS.gene60162:CDS | 55.0% |
| !! | TCCACTGGAGCTGGTTCTAC+CGG | - | chr8.4:2669975-2669994 | None:intergenic | 55.0% |
| !! | TGGGGTGGGTTGGACATGTT+AGG | - | chr8.4:2673316-2673335 | None:intergenic | 55.0% |
| AAGCCCCAGCGCATAGGAAG+TGG | - | chr8.4:2670607-2670626 | None:intergenic | 60.0% | |
| TCCGCACTTTCCACTGGAGC+TGG | - | chr8.4:2669984-2670003 | None:intergenic | 60.0% | |
| TCCGGTAGAACCAGCTCCAG+TGG | + | chr8.4:2669971-2669990 | MS.gene60162:CDS | 60.0% | |
| TGCTTGGCAGCCTGTTTGGC+AGG | + | chr8.4:2672224-2672243 | MS.gene60162:CDS | 60.0% | |
| ! | CTGCCACTTCCTATGCGCTG+GGG | + | chr8.4:2670601-2670620 | MS.gene60162:CDS | 60.0% |
| AGCAGGGCCAGAAGGGGAGA+CGG | - | chr8.4:2671985-2672004 | None:intergenic | 65.0% | |
| CCTGTCCAAGCCCAAGCCAG+AGG | - | chr8.4:2670663-2670682 | None:intergenic | 65.0% | |
| !! | CCTCTGGCTTGGGCTTGGAC+AGG | + | chr8.4:2670660-2670679 | MS.gene60162:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 2669421 | 2675577 | 2669421 | ID=MS.gene60162 |
| chr8.4 | mRNA | 2669421 | 2675577 | 2669421 | ID=MS.gene60162.t1;Parent=MS.gene60162 |
| chr8.4 | exon | 2669421 | 2669484 | 2669421 | ID=MS.gene60162.t1.exon1;Parent=MS.gene60162.t1 |
| chr8.4 | CDS | 2669421 | 2669484 | 2669421 | ID=cds.MS.gene60162.t1;Parent=MS.gene60162.t1 |
| chr8.4 | exon | 2669862 | 2670106 | 2669862 | ID=MS.gene60162.t1.exon2;Parent=MS.gene60162.t1 |
| chr8.4 | CDS | 2669862 | 2670106 | 2669862 | ID=cds.MS.gene60162.t1;Parent=MS.gene60162.t1 |
| chr8.4 | exon | 2670555 | 2670698 | 2670555 | ID=MS.gene60162.t1.exon3;Parent=MS.gene60162.t1 |
| chr8.4 | CDS | 2670555 | 2670698 | 2670555 | ID=cds.MS.gene60162.t1;Parent=MS.gene60162.t1 |
| chr8.4 | exon | 2670839 | 2670990 | 2670839 | ID=MS.gene60162.t1.exon4;Parent=MS.gene60162.t1 |
| chr8.4 | CDS | 2670839 | 2670990 | 2670839 | ID=cds.MS.gene60162.t1;Parent=MS.gene60162.t1 |
| chr8.4 | exon | 2672209 | 2672331 | 2672209 | ID=MS.gene60162.t1.exon5;Parent=MS.gene60162.t1 |
| chr8.4 | CDS | 2672209 | 2672331 | 2672209 | ID=cds.MS.gene60162.t1;Parent=MS.gene60162.t1 |
| chr8.4 | exon | 2672462 | 2672639 | 2672462 | ID=MS.gene60162.t1.exon6;Parent=MS.gene60162.t1 |
| chr8.4 | CDS | 2672462 | 2672639 | 2672462 | ID=cds.MS.gene60162.t1;Parent=MS.gene60162.t1 |
| chr8.4 | exon | 2674204 | 2674322 | 2674204 | ID=MS.gene60162.t1.exon7;Parent=MS.gene60162.t1 |
| chr8.4 | CDS | 2674204 | 2674322 | 2674204 | ID=cds.MS.gene60162.t1;Parent=MS.gene60162.t1 |
| chr8.4 | exon | 2674971 | 2675085 | 2674971 | ID=MS.gene60162.t1.exon8;Parent=MS.gene60162.t1 |
| chr8.4 | CDS | 2674971 | 2675085 | 2674971 | ID=cds.MS.gene60162.t1;Parent=MS.gene60162.t1 |
| chr8.4 | exon | 2675416 | 2675577 | 2675416 | ID=MS.gene60162.t1.exon9;Parent=MS.gene60162.t1 |
| chr8.4 | CDS | 2675416 | 2675577 | 2675416 | ID=cds.MS.gene60162.t1;Parent=MS.gene60162.t1 |
| Gene Sequence |
| Protein sequence |
