Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66892.t1 | XP_024631447.1 | 99 | 415 | 4 | 0 | 1 | 415 | 1 | 415 | 1.00E-236 | 828.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66892.t1 | Q9SJE2 | 76.5 | 405 | 86 | 5 | 1 | 399 | 1 | 402 | 5.2e-173 | 608.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66892.t1 | A0A396JAN8 | 99.0 | 415 | 4 | 0 | 1 | 415 | 1 | 415 | 7.3e-237 | 828.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049356 | MS.gene66892 | 0.893065 | 8.89E-75 | -1.69E-46 |
| MS.gene049369 | MS.gene66892 | 0.866896 | 2.04E-65 | -1.69E-46 |
| MS.gene049396 | MS.gene66892 | 0.802749 | 4.84E-49 | -1.69E-46 |
| MS.gene049491 | MS.gene66892 | 0.820075 | 8.30E-53 | -1.69E-46 |
| MS.gene049907 | MS.gene66892 | 0.831453 | 1.66E-55 | -1.69E-46 |
| MS.gene050128 | MS.gene66892 | 0.847586 | 1.05E-59 | -1.69E-46 |
| MS.gene050301 | MS.gene66892 | 0.858091 | 1.05E-62 | -1.69E-46 |
| MS.gene050520 | MS.gene66892 | 0.800662 | 1.30E-48 | -1.69E-46 |
| MS.gene050625 | MS.gene66892 | 0.805204 | 1.49E-49 | -1.69E-46 |
| MS.gene050670 | MS.gene66892 | 0.854017 | 1.63E-61 | -1.69E-46 |
| MS.gene050971 | MS.gene66892 | 0.835634 | 1.50E-56 | -1.69E-46 |
| MS.gene05105 | MS.gene66892 | 0.850672 | 1.46E-60 | -1.69E-46 |
| MS.gene051360 | MS.gene66892 | 0.897349 | 1.53E-76 | -1.69E-46 |
| MS.gene051387 | MS.gene66892 | 0.822859 | 1.89E-53 | -1.69E-46 |
| MS.gene051525 | MS.gene66892 | 0.801622 | 8.26E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene66892 | 0.826502 | 2.62E-54 | -1.69E-46 |
| MS.gene051692 | MS.gene66892 | 0.819159 | 1.34E-52 | -1.69E-46 |
| MS.gene052188 | MS.gene66892 | 0.884402 | 1.98E-71 | -1.69E-46 |
| MS.gene052253 | MS.gene66892 | 0.840599 | 7.89E-58 | -1.69E-46 |
| MS.gene052310 | MS.gene66892 | 0.81374 | 2.20E-51 | -1.69E-46 |
| MS.gene052340 | MS.gene66892 | 0.856606 | 2.87E-62 | -1.69E-46 |
| MS.gene052414 | MS.gene66892 | 0.802334 | 5.89E-49 | -1.69E-46 |
| MS.gene052421 | MS.gene66892 | 0.833163 | 6.24E-56 | -1.69E-46 |
| MS.gene052485 | MS.gene66892 | 0.860725 | 1.69E-63 | -1.69E-46 |
| MS.gene052999 | MS.gene66892 | 0.810468 | 1.14E-50 | -1.69E-46 |
| MS.gene053103 | MS.gene66892 | 0.806678 | 7.32E-50 | -1.69E-46 |
| MS.gene053169 | MS.gene66892 | 0.829169 | 5.98E-55 | -1.69E-46 |
| MS.gene05316 | MS.gene66892 | 0.862785 | 3.96E-64 | -1.69E-46 |
| MS.gene053209 | MS.gene66892 | 0.851348 | 9.41E-61 | -1.69E-46 |
| MS.gene053449 | MS.gene66892 | 0.840504 | 8.36E-58 | -1.69E-46 |
| MS.gene053577 | MS.gene66892 | 0.816927 | 4.30E-52 | -1.69E-46 |
| MS.gene053758 | MS.gene66892 | 0.84893 | 4.48E-60 | -1.69E-46 |
| MS.gene053813 | MS.gene66892 | 0.879018 | 1.75E-69 | -1.69E-46 |
| MS.gene053912 | MS.gene66892 | 0.849916 | 2.38E-60 | -1.69E-46 |
| MS.gene054010 | MS.gene66892 | 0.835348 | 1.77E-56 | -1.69E-46 |
| MS.gene054011 | MS.gene66892 | 0.827825 | 1.26E-54 | -1.69E-46 |
| MS.gene054012 | MS.gene66892 | 0.829076 | 6.30E-55 | -1.69E-46 |
| MS.gene054013 | MS.gene66892 | 0.828822 | 7.26E-55 | -1.69E-46 |
| MS.gene054123 | MS.gene66892 | 0.842358 | 2.72E-58 | -1.69E-46 |
| MS.gene054349 | MS.gene66892 | 0.806483 | 8.05E-50 | -1.69E-46 |
| MS.gene054556 | MS.gene66892 | 0.837494 | 5.03E-57 | -1.69E-46 |
| MS.gene05505 | MS.gene66892 | 0.822176 | 2.72E-53 | -1.69E-46 |
| MS.gene055116 | MS.gene66892 | 0.848677 | 5.26E-60 | -1.69E-46 |
| MS.gene055412 | MS.gene66892 | 0.804536 | 2.06E-49 | -1.69E-46 |
| MS.gene055604 | MS.gene66892 | 0.814609 | 1.41E-51 | -1.69E-46 |
| MS.gene055633 | MS.gene66892 | 0.81708 | 3.97E-52 | -1.69E-46 |
| MS.gene055666 | MS.gene66892 | 0.83702 | 6.65E-57 | -1.69E-46 |
| MS.gene055741 | MS.gene66892 | 0.802579 | 5.25E-49 | -1.69E-46 |
| MS.gene055744 | MS.gene66892 | 0.809094 | 2.24E-50 | -1.69E-46 |
| MS.gene055802 | MS.gene66892 | 0.830552 | 2.75E-55 | -1.69E-46 |
| MS.gene055909 | MS.gene66892 | 0.848857 | 4.69E-60 | -1.69E-46 |
| MS.gene055911 | MS.gene66892 | 0.851578 | 8.10E-61 | -1.69E-46 |
| MS.gene056191 | MS.gene66892 | 0.838862 | 2.23E-57 | -1.69E-46 |
| MS.gene056407 | MS.gene66892 | 0.817954 | 2.52E-52 | -1.69E-46 |
| MS.gene056410 | MS.gene66892 | 0.833805 | 4.32E-56 | -1.69E-46 |
| MS.gene056422 | MS.gene66892 | 0.839126 | 1.91E-57 | -1.69E-46 |
| MS.gene056511 | MS.gene66892 | 0.858671 | 7.02E-63 | -1.69E-46 |
| MS.gene056609 | MS.gene66892 | 0.806411 | 8.33E-50 | -1.69E-46 |
| MS.gene056659 | MS.gene66892 | 0.838273 | 3.17E-57 | -1.69E-46 |
| MS.gene056719 | MS.gene66892 | 0.820314 | 7.32E-53 | -1.69E-46 |
| MS.gene056902 | MS.gene66892 | 0.828096 | 1.09E-54 | -1.69E-46 |
| MS.gene056931 | MS.gene66892 | 0.828073 | 1.10E-54 | -1.69E-46 |
| MS.gene056933 | MS.gene66892 | 0.825347 | 4.92E-54 | -1.69E-46 |
| MS.gene056935 | MS.gene66892 | 0.810345 | 1.21E-50 | -1.69E-46 |
| MS.gene057146 | MS.gene66892 | 0.808633 | 2.81E-50 | -1.69E-46 |
| MS.gene057285 | MS.gene66892 | 0.815214 | 1.04E-51 | -1.69E-46 |
| MS.gene057448 | MS.gene66892 | 0.858126 | 1.02E-62 | -1.69E-46 |
| MS.gene057449 | MS.gene66892 | 0.860024 | 2.76E-63 | -1.69E-46 |
| MS.gene057450 | MS.gene66892 | 0.861951 | 7.15E-64 | -1.69E-46 |
| MS.gene057469 | MS.gene66892 | 0.812734 | 3.65E-51 | -1.69E-46 |
| MS.gene057537 | MS.gene66892 | 0.831493 | 1.62E-55 | -1.69E-46 |
| MS.gene057610 | MS.gene66892 | 0.821545 | 3.81E-53 | -1.69E-46 |
| MS.gene057734 | MS.gene66892 | 0.819917 | 9.03E-53 | -1.69E-46 |
| MS.gene057749 | MS.gene66892 | 0.849351 | 3.42E-60 | -1.69E-46 |
| MS.gene057796 | MS.gene66892 | 0.817296 | 3.55E-52 | -1.69E-46 |
| MS.gene057823 | MS.gene66892 | 0.84731 | 1.25E-59 | -1.69E-46 |
| MS.gene058002 | MS.gene66892 | 0.802131 | 6.49E-49 | -1.69E-46 |
| MS.gene058007 | MS.gene66892 | 0.872955 | 2.14E-67 | -1.69E-46 |
| MS.gene058075 | MS.gene66892 | 0.856864 | 2.41E-62 | -1.69E-46 |
| MS.gene058082 | MS.gene66892 | 0.811564 | 6.57E-51 | -1.69E-46 |
| MS.gene05811 | MS.gene66892 | 0.818783 | 1.64E-52 | -1.69E-46 |
| MS.gene058120 | MS.gene66892 | 0.838772 | 2.36E-57 | -1.69E-46 |
| MS.gene058365 | MS.gene66892 | 0.800737 | 1.25E-48 | -1.69E-46 |
| MS.gene05842 | MS.gene66892 | 0.823464 | 1.37E-53 | -1.69E-46 |
| MS.gene058459 | MS.gene66892 | 0.825736 | 3.98E-54 | -1.69E-46 |
| MS.gene058660 | MS.gene66892 | 0.826388 | 2.79E-54 | -1.69E-46 |
| MS.gene058700 | MS.gene66892 | 0.840131 | 1.05E-57 | -1.69E-46 |
| MS.gene05886 | MS.gene66892 | 0.804962 | 1.68E-49 | -1.69E-46 |
| MS.gene058928 | MS.gene66892 | 0.849745 | 2.65E-60 | -1.69E-46 |
| MS.gene058948 | MS.gene66892 | 0.838287 | 3.15E-57 | -1.69E-46 |
| MS.gene058949 | MS.gene66892 | 0.836943 | 6.96E-57 | -1.69E-46 |
| MS.gene058995 | MS.gene66892 | 0.830926 | 2.23E-55 | -1.69E-46 |
| MS.gene05907 | MS.gene66892 | 0.848595 | 5.54E-60 | -1.69E-46 |
| MS.gene059294 | MS.gene66892 | 0.814061 | 1.87E-51 | -1.69E-46 |
| MS.gene059366 | MS.gene66892 | 0.848144 | 7.39E-60 | -1.69E-46 |
| MS.gene059368 | MS.gene66892 | 0.801179 | 1.02E-48 | -1.69E-46 |
| MS.gene059420 | MS.gene66892 | 0.833603 | 4.85E-56 | -1.69E-46 |
| MS.gene059462 | MS.gene66892 | 0.806009 | 1.01E-49 | -1.69E-46 |
| MS.gene059530 | MS.gene66892 | 0.80453 | 2.07E-49 | -1.69E-46 |
| MS.gene059597 | MS.gene66892 | 0.842116 | 3.15E-58 | -1.69E-46 |
| MS.gene05959 | MS.gene66892 | 0.806481 | 8.06E-50 | -1.69E-46 |
| MS.gene059674 | MS.gene66892 | 0.880257 | 6.37E-70 | -1.69E-46 |
| MS.gene059676 | MS.gene66892 | 0.853879 | 1.78E-61 | -1.69E-46 |
| MS.gene059688 | MS.gene66892 | 0.890935 | 6.28E-74 | -1.69E-46 |
| MS.gene059692 | MS.gene66892 | 0.876738 | 1.10E-68 | -1.69E-46 |
| MS.gene059695 | MS.gene66892 | 0.872483 | 3.07E-67 | -1.69E-46 |
| MS.gene059711 | MS.gene66892 | 0.901027 | 4.06E-78 | -1.69E-46 |
| MS.gene059807 | MS.gene66892 | 0.882223 | 1.25E-70 | -1.69E-46 |
| MS.gene05984 | MS.gene66892 | 0.820397 | 7.01E-53 | -1.69E-46 |
| MS.gene05986 | MS.gene66892 | 0.83571 | 1.43E-56 | -1.69E-46 |
| MS.gene059876 | MS.gene66892 | 0.830231 | 3.30E-55 | -1.69E-46 |
| MS.gene059974 | MS.gene66892 | 0.838507 | 2.76E-57 | -1.69E-46 |
| MS.gene060247 | MS.gene66892 | 0.809594 | 1.75E-50 | -1.69E-46 |
| MS.gene060372 | MS.gene66892 | 0.820346 | 7.20E-53 | -1.69E-46 |
| MS.gene06037 | MS.gene66892 | 0.801905 | 7.22E-49 | -1.69E-46 |
| MS.gene060403 | MS.gene66892 | 0.810047 | 1.40E-50 | -1.69E-46 |
| MS.gene060495 | MS.gene66892 | 0.840723 | 7.32E-58 | -1.69E-46 |
| MS.gene060559 | MS.gene66892 | 0.819849 | 9.36E-53 | -1.69E-46 |
| MS.gene060804 | MS.gene66892 | 0.801551 | 8.53E-49 | -1.69E-46 |
| MS.gene060818 | MS.gene66892 | 0.80479 | 1.82E-49 | -1.69E-46 |
| MS.gene060837 | MS.gene66892 | 0.886726 | 2.66E-72 | -1.69E-46 |
| MS.gene060986 | MS.gene66892 | 0.807348 | 5.28E-50 | -1.69E-46 |
| MS.gene061049 | MS.gene66892 | 0.824677 | 7.09E-54 | -1.69E-46 |
| MS.gene061051 | MS.gene66892 | -0.830391 | 3.01E-55 | -1.69E-46 |
| MS.gene061154 | MS.gene66892 | 0.805696 | 1.18E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66892.t1 | MTR_4g112970 | 78.922 | 408 | 79 | 5 | 12 | 415 | 10 | 414 | 0.0 | 652 |
| MS.gene66892.t1 | MTR_3g099020 | 56.584 | 281 | 113 | 4 | 128 | 399 | 103 | 383 | 7.51e-107 | 320 |
| MS.gene66892.t1 | MTR_1g109110 | 49.446 | 271 | 117 | 2 | 121 | 391 | 75 | 325 | 1.93e-87 | 271 |
| MS.gene66892.t1 | MTR_7g056233 | 45.333 | 300 | 143 | 6 | 121 | 399 | 67 | 366 | 9.67e-84 | 261 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66892.t1 | AT1G08510 | 76.296 | 405 | 87 | 5 | 1 | 399 | 1 | 402 | 0.0 | 608 |
| MS.gene66892.t1 | AT3G25110 | 46.644 | 298 | 136 | 7 | 121 | 400 | 68 | 360 | 1.10e-89 | 276 |
| MS.gene66892.t1 | AT4G13050 | 44.482 | 299 | 141 | 5 | 123 | 399 | 69 | 364 | 3.21e-86 | 267 |
Find 105 sgRNAs with CRISPR-Local
Find 161 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTCATGACTTTCCAAAAT+TGG | 0.201804 | 2.3:+37552000 | None:intergenic |
| TCAAAATTGTTGATAGGTTT+TGG | 0.207603 | 2.3:+37551799 | None:intergenic |
| TCGATTAGATCGTACGAAAT+AGG | 0.231767 | 2.3:-37553735 | MS.gene66892:CDS |
| GAGTGCTCCACAGCCAATTT+TGG | 0.240163 | 2.3:-37552013 | MS.gene66892:CDS |
| TGTCAAGATTTCCCCTGTTT+TGG | 0.256851 | 2.3:+37553019 | None:intergenic |
| AACCGCAGTTCCGTTGATTT+TGG | 0.259020 | 2.3:+37553992 | None:intergenic |
| GTTAAGACTGCCGGGCTTCT+TGG | 0.280843 | 2.3:-37553545 | MS.gene66892:CDS |
| CTTGTGCGGGACGCCAAAAC+AGG | 0.319851 | 2.3:-37553032 | MS.gene66892:CDS |
| ACGATCTAATCGAAAAGTTT+TGG | 0.327229 | 2.3:+37553745 | None:intergenic |
| ATGATGGTGCCGAGATTGTT+AGG | 0.330723 | 2.3:-37551840 | MS.gene66892:CDS |
| ATCTCTCCTCTGACCTCTTC+CGG | 0.338263 | 2.3:+37552624 | None:intergenic |
| CTGTTATCCTCGTCCACAAC+TGG | 0.341684 | 2.3:+37552576 | None:intergenic |
| GACGTTAATGAATCATTTGC+AGG | 0.353941 | 2.3:-37553688 | MS.gene66892:intron |
| AAATCCAAGCAAAGCTCTAA+TGG | 0.355569 | 2.3:-37554044 | MS.gene66892:CDS |
| GAAGTACATTGGGTGGATTC+TGG | 0.356450 | 2.3:-37552366 | MS.gene66892:CDS |
| AGAACATCAAAATTGTTGAT+AGG | 0.357493 | 2.3:+37551793 | None:intergenic |
| TGGTATAGGGAAAATTGTTC+AGG | 0.362930 | 2.3:-37553784 | MS.gene66892:CDS |
| GATATGCTTGTTGACCCTTT+TGG | 0.364899 | 2.3:-37553804 | MS.gene66892:CDS |
| GGGCTTCTTGGTGATGGCTT+TGG | 0.374601 | 2.3:-37553533 | MS.gene66892:CDS |
| CTTCTCAGCAGCAAGGAAAA+TGG | 0.375814 | 2.3:+37553863 | None:intergenic |
| AGCAGAACTAACTCCATGTT+TGG | 0.390225 | 2.3:+37554082 | None:intergenic |
| GATGAAGATGATGATGTAAC+AGG | 0.397644 | 2.3:+37554125 | None:intergenic |
| GACACTTGGGTTTCTGCGGC+AGG | 0.408861 | 2.3:-37553080 | MS.gene66892:CDS |
| ACTAACTAAACTTGATGATT+CGG | 0.409649 | 2.3:-37552550 | MS.gene66892:CDS |
| AAAGGGTCAACAAGCATATC+AGG | 0.416344 | 2.3:+37553807 | None:intergenic |
| AACATCTAGATCATTCCATC+TGG | 0.417317 | 2.3:+37552409 | None:intergenic |
| TCATCAATCAGTTACCTGAT+TGG | 0.429393 | 2.3:-37553911 | MS.gene66892:CDS |
| CAGTCCCTGACATCTGTCTC+TGG | 0.445222 | 2.3:-37551925 | MS.gene66892:CDS |
| TGAGCTGCATTCCATGACTT+TGG | 0.456877 | 2.3:-37551983 | MS.gene66892:CDS |
| AAGGAAACTATCTAAAATTC+CGG | 0.457461 | 2.3:-37552643 | MS.gene66892:CDS |
| CTTAATCATGTTAAGACTGC+CGG | 0.467906 | 2.3:-37553554 | MS.gene66892:CDS |
| GCAAGAAGCATGCTCCAATC+AGG | 0.470456 | 2.3:+37553897 | None:intergenic |
| AGCAGTGGATGATGCTTGAT+TGG | 0.473258 | 2.3:-37553842 | MS.gene66892:CDS |
| GTTAGTTCTGCTAACCTTGG+AGG | 0.478639 | 2.3:-37554071 | MS.gene66892:CDS |
| AAAATGGTATGCGTCGTGAT+TGG | 0.485644 | 2.3:-37553055 | MS.gene66892:CDS |
| GAGATTGTTAGGGGTAGGAC+TGG | 0.487479 | 2.3:-37551829 | MS.gene66892:CDS |
| TCTGTCTCTGGTGCTGACAT+TGG | 0.489613 | 2.3:-37551913 | MS.gene66892:CDS |
| TGATGGTGCCGAGATTGTTA+GGG | 0.496988 | 2.3:-37551839 | MS.gene66892:CDS |
| TTCTGATCCAGTTGTGGACG+AGG | 0.498778 | 2.3:-37552583 | MS.gene66892:CDS |
| ACTGCCGGGCTTCTTGGTGA+TGG | 0.499989 | 2.3:-37553539 | MS.gene66892:CDS |
| AAAGCCATCACCAAGAAGCC+CGG | 0.500537 | 2.3:+37553535 | None:intergenic |
| ACTATCTAAAATTCCGGAAG+AGG | 0.500584 | 2.3:-37552637 | MS.gene66892:CDS |
| TGTTACTCGGATGCAGGTTG+TGG | 0.502339 | 2.3:-37553471 | MS.gene66892:CDS |
| TGACTTTCCAAAATTGGCTG+TGG | 0.502973 | 2.3:+37552006 | None:intergenic |
| AACATTTAGGTGCTCTGTGA+TGG | 0.506232 | 2.3:+37551760 | None:intergenic |
| GTTAATAATGTGAAGTACAT+TGG | 0.509594 | 2.3:-37552377 | MS.gene66892:CDS |
| ATTCCATGACTTTGGAGTAC+AGG | 0.511740 | 2.3:-37551975 | MS.gene66892:CDS |
| AACTGATTGATGAATGTCCT+TGG | 0.514222 | 2.3:+37553921 | None:intergenic |
| CACTTGCTTCGACTCGATGA+TGG | 0.516598 | 2.3:-37551856 | MS.gene66892:CDS |
| ACTTGATATGGGTTGTTACT+CGG | 0.517014 | 2.3:-37553484 | MS.gene66892:CDS |
| TAATCCATTAGAGCTTTGCT+TGG | 0.517131 | 2.3:+37554040 | None:intergenic |
| AGAACTAACTCCATGTTTGG+AGG | 0.519503 | 2.3:+37554085 | None:intergenic |
| TCGGCTGAATATATTCGCAC+TGG | 0.521996 | 2.3:-37552531 | MS.gene66892:CDS |
| TTAATAATGTGAAGTACATT+GGG | 0.528885 | 2.3:-37552376 | MS.gene66892:CDS |
| TTGTGCGGGACGCCAAAACA+GGG | 0.529894 | 2.3:-37553031 | MS.gene66892:CDS |
| TTAATCATGTTAAGACTGCC+GGG | 0.532564 | 2.3:-37553553 | MS.gene66892:CDS |
| TCATCTTCATCTGACAGTGT+TGG | 0.533513 | 2.3:-37554113 | MS.gene66892:CDS |
| CAGCACCAGAGACAGATGTC+AGG | 0.537306 | 2.3:+37551920 | None:intergenic |
| GTCCTTGGGTGATGTTGTGA+TGG | 0.537958 | 2.3:+37553936 | None:intergenic |
| ATGGGTTGTTACTCGGATGC+AGG | 0.539000 | 2.3:-37553477 | MS.gene66892:CDS |
| TCCTTGCTGCTGAGAAGCAG+TGG | 0.539829 | 2.3:-37553857 | MS.gene66892:CDS |
| AGATTGTTAGGGGTAGGACT+GGG | 0.539935 | 2.3:-37551828 | MS.gene66892:CDS |
| GGAGTTAGTTCTGCTAACCT+TGG | 0.540076 | 2.3:-37554074 | MS.gene66892:CDS |
| AAGTTGTTCAAGTAGACACT+TGG | 0.551856 | 2.3:-37553094 | MS.gene66892:CDS |
| GCGTCGTGATTGGCTTGTGC+GGG | 0.553139 | 2.3:-37553045 | MS.gene66892:CDS |
| TTGTTAGGGGTAGGACTGGG+TGG | 0.554507 | 2.3:-37551825 | MS.gene66892:CDS |
| TTGGAAATTTAGCTGACAGC+GGG | 0.555268 | 2.3:-37551894 | MS.gene66892:CDS |
| GCTTGGATTTGAATCCTCCA+AGG | 0.561042 | 2.3:+37554057 | None:intergenic |
| TGTTAATTCTGATCCAGTTG+TGG | 0.567572 | 2.3:-37552589 | MS.gene66892:CDS |
| ACTGATTGATGAATGTCCTT+GGG | 0.570069 | 2.3:+37553922 | None:intergenic |
| AGCAAGGAAAATGGTGGTAA+CGG | 0.574467 | 2.3:+37553872 | None:intergenic |
| ACAAGCATATCAGGTCGTCT+TGG | 0.575651 | 2.3:+37553816 | None:intergenic |
| AGTCCTACCCCTAACAATCT+CGG | 0.577020 | 2.3:+37551831 | None:intergenic |
| AGTACAGGAGGGAATGTGGC+AGG | 0.577889 | 2.3:-37551960 | MS.gene66892:CDS |
| TGCGTCGTGATTGGCTTGTG+CGG | 0.578969 | 2.3:-37553046 | MS.gene66892:CDS |
| TTAGGGGTAGGACTGGGTGG+AGG | 0.580415 | 2.3:-37551822 | MS.gene66892:CDS |
| ATAATGTGAAGTACATTGGG+TGG | 0.582097 | 2.3:-37552373 | MS.gene66892:CDS |
| AAATCTTGACAAGAGCATCC+AGG | 0.590317 | 2.3:-37553007 | MS.gene66892:intron |
| ACATCTAGATCATTCCATCT+GGG | 0.591455 | 2.3:+37552410 | None:intergenic |
| CCATGACTTTGGAGTACAGG+AGG | 0.592758 | 2.3:-37551972 | MS.gene66892:CDS |
| TCCACTGCTTCTCAGCAGCA+AGG | 0.592772 | 2.3:+37553856 | None:intergenic |
| CCTCCTGTACTCCAAAGTCA+TGG | 0.597089 | 2.3:+37551972 | None:intergenic |
| GGTTACAACTACGACGGTGA+AGG | 0.598952 | 2.3:-37553973 | MS.gene66892:CDS |
| GTTGGAAAATCCTCCAAACA+TGG | 0.605432 | 2.3:-37554095 | MS.gene66892:CDS |
| AGTTGTTCAAGTAGACACTT+GGG | 0.611713 | 2.3:-37553093 | MS.gene66892:CDS |
| TTGGAGTACAGGAGGGAATG+TGG | 0.613380 | 2.3:-37551964 | MS.gene66892:CDS |
| AGCACCAGAGACAGATGTCA+GGG | 0.622472 | 2.3:+37551921 | None:intergenic |
| CACCATCACAACATCACCCA+AGG | 0.625250 | 2.3:-37553938 | MS.gene66892:CDS |
| AGTAGACACTTGGGTTTCTG+CGG | 0.630478 | 2.3:-37553084 | MS.gene66892:CDS |
| CATGACTTTGGAGTACAGGA+GGG | 0.633124 | 2.3:-37551971 | MS.gene66892:CDS |
| GATGGTGCCGAGATTGTTAG+GGG | 0.638472 | 2.3:-37551838 | MS.gene66892:CDS |
| GTGCCGAGATTGTTAGGGGT+AGG | 0.642317 | 2.3:-37551834 | MS.gene66892:CDS |
| TGGTTGATCGTTATCCGACG+TGG | 0.644890 | 2.3:-37553451 | MS.gene66892:intron |
| GCAGCACCTTCCAAAATCAA+CGG | 0.646470 | 2.3:-37554002 | MS.gene66892:CDS |
| ATAGGGAAAATTGTTCAGGA+TGG | 0.648420 | 2.3:-37553780 | MS.gene66892:CDS |
| TCATGATGAATAAACTGACA+AGG | 0.652704 | 2.3:-37552662 | MS.gene66892:CDS |
| AAAATTCCGGAAGAGGTCAG+AGG | 0.654352 | 2.3:-37552630 | MS.gene66892:CDS |
| CTCAGCAGCAAGGAAAATGG+TGG | 0.660147 | 2.3:+37553866 | None:intergenic |
| ATTGGAAATTTAGCTGACAG+CGG | 0.670615 | 2.3:-37551895 | MS.gene66892:CDS |
| GTACATTGGGTGGATTCTGG+AGG | 0.672791 | 2.3:-37552363 | MS.gene66892:intron |
| TGTGCGGGACGCCAAAACAG+GGG | 0.673030 | 2.3:-37553030 | MS.gene66892:CDS |
| TTCCAAAATCAACGGAACTG+CGG | 0.674773 | 2.3:-37553994 | MS.gene66892:CDS |
| AACTGCGGTTACAACTACGA+CGG | 0.716495 | 2.3:-37553979 | MS.gene66892:CDS |
| TAGATCGTACGAAATAGGTG+CGG | 0.735860 | 2.3:-37553730 | MS.gene66892:CDS |
| TATGTTAAGACTAACCACGT+CGG | 0.763065 | 2.3:+37553437 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATCAATTTTTGTAAAAT+AGG | + | chr2.3:37553098-37553117 | None:intergenic | 10.0% |
| !! | ACTAAACAAATAATCAAAAA+GGG | + | chr2.3:37553838-37553857 | None:intergenic | 15.0% |
| !!! | TAATTATTTGTTTTGATAAC+AGG | - | chr2.3:37552338-37552357 | MS.gene66892:intron | 15.0% |
| !!! | TACAAACTTTTTATAAAAGT+AGG | + | chr2.3:37552618-37552637 | None:intergenic | 15.0% |
| !! | ATCTTTGATAAACAAATCAA+TGG | - | chr2.3:37553704-37553723 | MS.gene66892:CDS | 20.0% |
| !! | GACTAAACAAATAATCAAAA+AGG | + | chr2.3:37553839-37553858 | None:intergenic | 20.0% |
| !! | TTAATAATGTGAAGTACATT+GGG | - | chr2.3:37553547-37553566 | MS.gene66892:CDS | 20.0% |
| !!! | AACATTTTCAACATATCTTA+TGG | + | chr2.3:37552984-37553003 | None:intergenic | 20.0% |
| !!! | AGCTTTATACATATGAATTT+TGG | - | chr2.3:37552524-37552543 | MS.gene66892:CDS | 20.0% |
| !!! | GCTTTATACATATGAATTTT+GGG | - | chr2.3:37552525-37552544 | MS.gene66892:CDS | 20.0% |
| !!! | TATGCTTGAAATTATGTTTT+TGG | - | chr2.3:37552750-37552769 | MS.gene66892:intron | 20.0% |
| !!! | TTATGTAACAAATTTGTTGT+GGG | - | chr2.3:37552292-37552311 | MS.gene66892:intron | 20.0% |
| !!! | TTTATGTAACAAATTTGTTG+TGG | - | chr2.3:37552291-37552310 | MS.gene66892:intron | 20.0% |
| ! | ACAGGGTATGAAATATAAAA+TGG | - | chr2.3:37552571-37552590 | MS.gene66892:CDS | 25.0% |
| ! | AGAACATCAAAATTGTTGAT+AGG | + | chr2.3:37554133-37554152 | None:intergenic | 25.0% |
| ! | ATATCAACAGTAGAATGAAT+TGG | - | chr2.3:37553791-37553810 | MS.gene66892:CDS | 25.0% |
| ! | GTTAATAATGTGAAGTACAT+TGG | - | chr2.3:37553546-37553565 | MS.gene66892:CDS | 25.0% |
| ! | GTTTAGTCAATAAACTTATC+AGG | - | chr2.3:37553851-37553870 | MS.gene66892:CDS | 25.0% |
| !! | AAGGAAACTATCTAAAATTC+CGG | - | chr2.3:37553280-37553299 | MS.gene66892:intron | 25.0% |
| !! | ACTAACTAAACTTGATGATT+CGG | - | chr2.3:37553373-37553392 | MS.gene66892:intron | 25.0% |
| !! | TTTGATGTTTTACAGTGTTT+GGG | - | chr2.3:37553238-37553257 | MS.gene66892:intron | 25.0% |
| !! | TTTTACCATAATATGTAGCT+AGG | + | chr2.3:37552656-37552675 | None:intergenic | 25.0% |
| !! | TTTTGATGTTTTACAGTGTT+TGG | - | chr2.3:37553237-37553256 | MS.gene66892:intron | 25.0% |
| !!! | TCAAAATTGTTGATAGGTTT+TGG | + | chr2.3:37554127-37554146 | None:intergenic | 25.0% |
| !!! | TTTTGCAATTTCTGATTTGT+TGG | - | chr2.3:37553208-37553227 | MS.gene66892:intron | 25.0% |
| AACAATTTGCAAAGTACAGA+CGG | + | chr2.3:37552715-37552734 | None:intergenic | 30.0% | |
| AGTGAATCTATATTTGCTTC+AGG | - | chr2.3:37552802-37552821 | MS.gene66892:intron | 30.0% | |
| GCTTGAAAGATTAAAAACAG+TGG | + | chr2.3:37553040-37553059 | None:intergenic | 30.0% | |
| GTGAATCTATATTTGCTTCA+GGG | - | chr2.3:37552803-37552822 | MS.gene66892:intron | 30.0% | |
| GTGCAAAAAGAACTTGATAT+GGG | - | chr2.3:37552428-37552447 | MS.gene66892:intron | 30.0% | |
| TAGTAGAGATCGTCTTAATA+AGG | - | chr2.3:37553668-37553687 | MS.gene66892:intron | 30.0% | |
| TCATGATGAATAAACTGACA+AGG | - | chr2.3:37553261-37553280 | MS.gene66892:intron | 30.0% | |
| TGAATCTATATTTGCTTCAG+GGG | - | chr2.3:37552804-37552823 | MS.gene66892:intron | 30.0% | |
| TGTGCAAAAAGAACTTGATA+TGG | - | chr2.3:37552427-37552446 | MS.gene66892:intron | 30.0% | |
| ! | AAGTTCTTTTTGCACATTTC+TGG | + | chr2.3:37552423-37552442 | None:intergenic | 30.0% |
| ! | ACAATTTTCCCTATACCAAA+AGG | + | chr2.3:37552137-37552156 | None:intergenic | 30.0% |
| ! | ACGATCTAATCGAAAAGTTT+TGG | + | chr2.3:37552181-37552200 | None:intergenic | 30.0% |
| ! | CAATTTTCCCTATACCAAAA+GGG | + | chr2.3:37552136-37552155 | None:intergenic | 30.0% |
| !! | TCAGTTTGCTTTTGTCAAAT+CGG | - | chr2.3:37553125-37553144 | MS.gene66892:intron | 30.0% |
| AACATCTAGATCATTCCATC+TGG | + | chr2.3:37553517-37553536 | None:intergenic | 35.0% | |
| AACTGATTGATGAATGTCCT+TGG | + | chr2.3:37552005-37552024 | None:intergenic | 35.0% | |
| AAGTTGTTCAAGTAGACACT+TGG | - | chr2.3:37552829-37552848 | MS.gene66892:intron | 35.0% | |
| ACATCTAGATCATTCCATCT+GGG | + | chr2.3:37553516-37553535 | None:intergenic | 35.0% | |
| ACTGATTGATGAATGTCCTT+GGG | + | chr2.3:37552004-37552023 | None:intergenic | 35.0% | |
| AGCTCATGACTTTCCAAAAT+TGG | + | chr2.3:37553926-37553945 | None:intergenic | 35.0% | |
| AGTTGTTCAAGTAGACACTT+GGG | - | chr2.3:37552830-37552849 | MS.gene66892:intron | 35.0% | |
| ATAATGTGAAGTACATTGGG+TGG | - | chr2.3:37553550-37553569 | MS.gene66892:CDS | 35.0% | |
| ATAGGGAAAATTGTTCAGGA+TGG | - | chr2.3:37552143-37552162 | MS.gene66892:intron | 35.0% | |
| ATTGGAAATTTAGCTGACAG+CGG | - | chr2.3:37554028-37554047 | MS.gene66892:CDS | 35.0% | |
| CTTAATCATGTTAAGACTGC+CGG | - | chr2.3:37552369-37552388 | MS.gene66892:CDS | 35.0% | |
| GACGTTAATGAATCATTTGC+AGG | - | chr2.3:37552235-37552254 | MS.gene66892:intron | 35.0% | |
| TAATCCATTAGAGCTTTGCT+TGG | + | chr2.3:37551886-37551905 | None:intergenic | 35.0% | |
| TATGTTAAGACTAACCACGT+CGG | + | chr2.3:37552489-37552508 | None:intergenic | 35.0% | |
| TCATCAATCAGTTACCTGAT+TGG | - | chr2.3:37552012-37552031 | MS.gene66892:CDS | 35.0% | |
| TCGATTAGATCGTACGAAAT+AGG | - | chr2.3:37552188-37552207 | MS.gene66892:intron | 35.0% | |
| TGGTATAGGGAAAATTGTTC+AGG | - | chr2.3:37552139-37552158 | MS.gene66892:intron | 35.0% | |
| TGTTAATTCTGATCCAGTTG+TGG | - | chr2.3:37553334-37553353 | MS.gene66892:intron | 35.0% | |
| TTAATCATGTTAAGACTGCC+GGG | - | chr2.3:37552370-37552389 | MS.gene66892:CDS | 35.0% | |
| TTGGGATTTCCTTTGTCTTT+AGG | - | chr2.3:37552543-37552562 | MS.gene66892:CDS | 35.0% | |
| TTTGTCTTTAGGCTGTTACA+GGG | - | chr2.3:37552554-37552573 | MS.gene66892:CDS | 35.0% | |
| ! | AAATCCAAGCAAAGCTCTAA+TGG | - | chr2.3:37551879-37551898 | MS.gene66892:CDS | 35.0% |
| ! | ACTATCTAAAATTCCGGAAG+AGG | - | chr2.3:37553286-37553305 | MS.gene66892:intron | 35.0% |
| ! | ACTTGATATGGGTTGTTACT+CGG | - | chr2.3:37552439-37552458 | MS.gene66892:intron | 35.0% |
| ! | GAATGAATTGGTCACTTTAG+AGG | - | chr2.3:37553803-37553822 | MS.gene66892:CDS | 35.0% |
| ! | GATGAAGATGATGATGTAAC+AGG | + | chr2.3:37551801-37551820 | None:intergenic | 35.0% |
| ! | GTTAGCCTAGCTACATATTA+TGG | - | chr2.3:37552648-37552667 | MS.gene66892:CDS | 35.0% |
| ! | TTGTTGACCCTTTTGGTATA+GGG | - | chr2.3:37552126-37552145 | MS.gene66892:intron | 35.0% |
| !! | GTTCTGAATTGACTTTTACC+TGG | + | chr2.3:37552937-37552956 | None:intergenic | 35.0% |
| AAAATGGTATGCGTCGTGAT+TGG | - | chr2.3:37552868-37552887 | MS.gene66892:intron | 40.0% | |
| AAAGGGTCAACAAGCATATC+AGG | + | chr2.3:37552119-37552138 | None:intergenic | 40.0% | |
| AACAAGAACACGAGAAAGTG+AGG | + | chr2.3:37553625-37553644 | None:intergenic | 40.0% | |
| AGAACTAACTCCATGTTTGG+AGG | + | chr2.3:37551841-37551860 | None:intergenic | 40.0% | |
| AGCAAGGAAAATGGTGGTAA+CGG | + | chr2.3:37552054-37552073 | None:intergenic | 40.0% | |
| AGCAGAACTAACTCCATGTT+TGG | + | chr2.3:37551844-37551863 | None:intergenic | 40.0% | |
| AGTGAAGAAAGGAGCAAGAA+AGG | + | chr2.3:37552959-37552978 | None:intergenic | 40.0% | |
| ATCTTATGGCCAGTGAAGAA+AGG | + | chr2.3:37552970-37552989 | None:intergenic | 40.0% | |
| CAATCAAACCACAATCCCTT+TGG | + | chr2.3:37553885-37553904 | None:intergenic | 40.0% | |
| CTGTAACAGCCTAAAGACAA+AGG | + | chr2.3:37552555-37552574 | None:intergenic | 40.0% | |
| CTTTGTCTTTAGGCTGTTAC+AGG | - | chr2.3:37552553-37552572 | MS.gene66892:CDS | 40.0% | |
| GTTGGAAAATCCTCCAAACA+TGG | - | chr2.3:37551828-37551847 | MS.gene66892:CDS | 40.0% | |
| TAGATCGTACGAAATAGGTG+CGG | - | chr2.3:37552193-37552212 | MS.gene66892:intron | 40.0% | |
| TCATCTTCATCTGACAGTGT+TGG | - | chr2.3:37551810-37551829 | MS.gene66892:CDS | 40.0% | |
| TGACTTTCCAAAATTGGCTG+TGG | + | chr2.3:37553920-37553939 | None:intergenic | 40.0% | |
| TTCCAAAATCAACGGAACTG+CGG | - | chr2.3:37551929-37551948 | MS.gene66892:CDS | 40.0% | |
| TTGGAAATTTAGCTGACAGC+GGG | - | chr2.3:37554029-37554048 | MS.gene66892:CDS | 40.0% | |
| TTTCTTGCTCCTTTCTTCAC+TGG | - | chr2.3:37552958-37552977 | MS.gene66892:intron | 40.0% | |
| ! | ATCTCTATTTTCAGCCCAGA+TGG | - | chr2.3:37553499-37553518 | MS.gene66892:CDS | 40.0% |
| ! | CTTGTTGACCCTTTTGGTAT+AGG | - | chr2.3:37552125-37552144 | MS.gene66892:intron | 40.0% |
| ! | TGTCAAGATTTCCCCTGTTT+TGG | + | chr2.3:37552907-37552926 | None:intergenic | 40.0% |
| !! | AAATCTTGACAAGAGCATCC+AGG | - | chr2.3:37552916-37552935 | MS.gene66892:intron | 40.0% |
| !! | ATTCCATGACTTTGGAGTAC+AGG | - | chr2.3:37553948-37553967 | MS.gene66892:CDS | 40.0% |
| !! | GATATGCTTGTTGACCCTTT+TGG | - | chr2.3:37552119-37552138 | MS.gene66892:intron | 40.0% |
| AAAAACAGTGGCCAGTCACA+AGG | + | chr2.3:37553028-37553047 | None:intergenic | 45.0% | |
| AAAATTCCGGAAGAGGTCAG+AGG | - | chr2.3:37553293-37553312 | MS.gene66892:intron | 45.0% | |
| AACTGCGGTTACAACTACGA+CGG | - | chr2.3:37551944-37551963 | MS.gene66892:CDS | 45.0% | |
| AAGAACACGAGAAAGTGAGG+AGG | + | chr2.3:37553622-37553641 | None:intergenic | 45.0% | |
| ACAAGCATATCAGGTCGTCT+TGG | + | chr2.3:37552110-37552129 | None:intergenic | 45.0% | |
| AGAACACGAGAAAGTGAGGA+GGG | + | chr2.3:37553621-37553640 | None:intergenic | 45.0% | |
| AGATTGTTAGGGGTAGGACT+GGG | - | chr2.3:37554095-37554114 | MS.gene66892:CDS | 45.0% | |
| AGCAGTGGATGATGCTTGAT+TGG | - | chr2.3:37552081-37552100 | MS.gene66892:intron | 45.0% | |
| AGTAGACACTTGGGTTTCTG+CGG | - | chr2.3:37552839-37552858 | MS.gene66892:intron | 45.0% | |
| AGTCCTACCCCTAACAATCT+CGG | + | chr2.3:37554095-37554114 | None:intergenic | 45.0% | |
| CCACAATCCCTTTGGTTAAG+CGG | + | chr2.3:37553877-37553896 | None:intergenic | 45.0% | |
| CTTCTCAGCAGCAAGGAAAA+TGG | + | chr2.3:37552063-37552082 | None:intergenic | 45.0% | |
| GCAGCACCTTCCAAAATCAA+CGG | - | chr2.3:37551921-37551940 | MS.gene66892:CDS | 45.0% | |
| GCTTGGATTTGAATCCTCCA+AGG | + | chr2.3:37551869-37551888 | None:intergenic | 45.0% | |
| GTTTCTGCGGCAGGAAAAAA+TGG | - | chr2.3:37552852-37552871 | MS.gene66892:intron | 45.0% | |
| TATCAGGCCGCTTAACCAAA+GGG | - | chr2.3:37553867-37553886 | MS.gene66892:CDS | 45.0% | |
| TCGGCTGAATATATTCGCAC+TGG | - | chr2.3:37553392-37553411 | MS.gene66892:intron | 45.0% | |
| TGAGCTGCATTCCATGACTT+TGG | - | chr2.3:37553940-37553959 | MS.gene66892:CDS | 45.0% | |
| TTATCAGGCCGCTTAACCAA+AGG | - | chr2.3:37553866-37553885 | MS.gene66892:CDS | 45.0% | |
| ! | ATGATGGTGCCGAGATTGTT+AGG | - | chr2.3:37554083-37554102 | MS.gene66892:CDS | 45.0% |
| ! | GAAGTACATTGGGTGGATTC+TGG | - | chr2.3:37553557-37553576 | MS.gene66892:CDS | 45.0% |
| ! | TGATGGTGCCGAGATTGTTA+GGG | - | chr2.3:37554084-37554103 | MS.gene66892:CDS | 45.0% |
| !! | CATGACTTTGGAGTACAGGA+GGG | - | chr2.3:37553952-37553971 | MS.gene66892:CDS | 45.0% |
| !! | GGAGTTAGTTCTGCTAACCT+TGG | - | chr2.3:37551849-37551868 | MS.gene66892:CDS | 45.0% |
| !! | GTTAGTTCTGCTAACCTTGG+AGG | - | chr2.3:37551852-37551871 | MS.gene66892:CDS | 45.0% |
| !!! | AACCGCAGTTCCGTTGATTT+TGG | + | chr2.3:37551934-37551953 | None:intergenic | 45.0% |
| !!! | GCAGTTCCGTTGATTTTGGA+AGG | + | chr2.3:37551930-37551949 | None:intergenic | 45.0% |
| AAAGCCATCACCAAGAAGCC+CGG | + | chr2.3:37552391-37552410 | None:intergenic | 50.0% | |
| AGCACCAGAGACAGATGTCA+GGG | + | chr2.3:37554005-37554024 | None:intergenic | 50.0% | |
| ATCTCTCCTCTGACCTCTTC+CGG | + | chr2.3:37553302-37553321 | None:intergenic | 50.0% | |
| CACCATCACAACATCACCCA+AGG | - | chr2.3:37551985-37552004 | MS.gene66892:CDS | 50.0% | |
| CCGCTTAACCAAAGGGATTG+TGG | - | chr2.3:37553874-37553893 | MS.gene66892:CDS | 50.0% | |
| CCTCCTGTACTCCAAAGTCA+TGG | + | chr2.3:37553954-37553973 | None:intergenic | 50.0% | |
| CTCAGCAGCAAGGAAAATGG+TGG | + | chr2.3:37552060-37552079 | None:intergenic | 50.0% | |
| CTGTTATCCTCGTCCACAAC+TGG | + | chr2.3:37553350-37553369 | None:intergenic | 50.0% | |
| GAACACGAGAAAGTGAGGAG+GGG | + | chr2.3:37553620-37553639 | None:intergenic | 50.0% | |
| GAATGTGCATGCCTTGTGAC+TGG | - | chr2.3:37553014-37553033 | MS.gene66892:CDS | 50.0% | |
| GAGATTGTTAGGGGTAGGAC+TGG | - | chr2.3:37554094-37554113 | MS.gene66892:CDS | 50.0% | |
| GGTTACAACTACGACGGTGA+AGG | - | chr2.3:37551950-37551969 | MS.gene66892:CDS | 50.0% | |
| GTCCTTGGGTGATGTTGTGA+TGG | + | chr2.3:37551990-37552009 | None:intergenic | 50.0% | |
| TGGTTGATCGTTATCCGACG+TGG | - | chr2.3:37552472-37552491 | MS.gene66892:intron | 50.0% | |
| TGTTACTCGGATGCAGGTTG+TGG | - | chr2.3:37552452-37552471 | MS.gene66892:intron | 50.0% | |
| TTCTGATCCAGTTGTGGACG+AGG | - | chr2.3:37553340-37553359 | MS.gene66892:intron | 50.0% | |
| TTGGAGTACAGGAGGGAATG+TGG | - | chr2.3:37553959-37553978 | MS.gene66892:CDS | 50.0% | |
| ! | ATGGGTTGTTACTCGGATGC+AGG | - | chr2.3:37552446-37552465 | MS.gene66892:intron | 50.0% |
| ! | CACTTGCTTCGACTCGATGA+TGG | - | chr2.3:37554067-37554086 | MS.gene66892:CDS | 50.0% |
| ! | GAGTGCTCCACAGCCAATTT+TGG | - | chr2.3:37553910-37553929 | MS.gene66892:CDS | 50.0% |
| ! | GATGGTGCCGAGATTGTTAG+GGG | - | chr2.3:37554085-37554104 | MS.gene66892:CDS | 50.0% |
| ! | GCAAGAAGCATGCTCCAATC+AGG | + | chr2.3:37552029-37552048 | None:intergenic | 50.0% |
| ! | GTACATTGGGTGGATTCTGG+AGG | - | chr2.3:37553560-37553579 | MS.gene66892:CDS | 50.0% |
| !! | CCATGACTTTGGAGTACAGG+AGG | - | chr2.3:37553951-37553970 | MS.gene66892:CDS | 50.0% |
| !! | TCTGTCTCTGGTGCTGACAT+TGG | - | chr2.3:37554010-37554029 | MS.gene66892:CDS | 50.0% |
| AGTACAGGAGGGAATGTGGC+AGG | - | chr2.3:37553963-37553982 | MS.gene66892:CDS | 55.0% | |
| CAGCACCAGAGACAGATGTC+AGG | + | chr2.3:37554006-37554025 | None:intergenic | 55.0% | |
| CAGTCCCTGACATCTGTCTC+TGG | - | chr2.3:37553998-37554017 | MS.gene66892:CDS | 55.0% | |
| GTGCCGAGATTGTTAGGGGT+AGG | - | chr2.3:37554089-37554108 | MS.gene66892:CDS | 55.0% | |
| GTTAAGACTGCCGGGCTTCT+TGG | - | chr2.3:37552378-37552397 | MS.gene66892:CDS | 55.0% | |
| TCCACTGCTTCTCAGCAGCA+AGG | + | chr2.3:37552070-37552089 | None:intergenic | 55.0% | |
| TCCTTGCTGCTGAGAAGCAG+TGG | - | chr2.3:37552066-37552085 | MS.gene66892:intron | 55.0% | |
| TTGTGCGGGACGCCAAAACA+GGG | - | chr2.3:37552892-37552911 | MS.gene66892:intron | 55.0% | |
| TTGTTAGGGGTAGGACTGGG+TGG | - | chr2.3:37554098-37554117 | MS.gene66892:CDS | 55.0% | |
| !! | GGGCTTCTTGGTGATGGCTT+TGG | - | chr2.3:37552390-37552409 | MS.gene66892:CDS | 55.0% |
| !! | TGCGTCGTGATTGGCTTGTG+CGG | - | chr2.3:37552877-37552896 | MS.gene66892:intron | 55.0% |
| ACTGCCGGGCTTCTTGGTGA+TGG | - | chr2.3:37552384-37552403 | MS.gene66892:CDS | 60.0% | |
| CTTGTGCGGGACGCCAAAAC+AGG | - | chr2.3:37552891-37552910 | MS.gene66892:intron | 60.0% | |
| GACACTTGGGTTTCTGCGGC+AGG | - | chr2.3:37552843-37552862 | MS.gene66892:intron | 60.0% | |
| TGTGCGGGACGCCAAAACAG+GGG | - | chr2.3:37552893-37552912 | MS.gene66892:intron | 60.0% | |
| TTAGGGGTAGGACTGGGTGG+AGG | - | chr2.3:37554101-37554120 | MS.gene66892:CDS | 60.0% | |
| !! | GCGTCGTGATTGGCTTGTGC+GGG | - | chr2.3:37552878-37552897 | MS.gene66892:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 37551765 | 37554180 | 37551765 | ID=MS.gene66892 |
| chr2.3 | mRNA | 37551765 | 37554180 | 37551765 | ID=MS.gene66892.t1;Parent=MS.gene66892 |
| chr2.3 | exon | 37553689 | 37554180 | 37553689 | ID=MS.gene66892.t1.exon1;Parent=MS.gene66892.t1 |
| chr2.3 | CDS | 37553689 | 37554180 | 37553689 | ID=cds.MS.gene66892.t1;Parent=MS.gene66892.t1 |
| chr2.3 | exon | 37553452 | 37553585 | 37553452 | ID=MS.gene66892.t1.exon2;Parent=MS.gene66892.t1 |
| chr2.3 | CDS | 37553452 | 37553585 | 37553452 | ID=cds.MS.gene66892.t1;Parent=MS.gene66892.t1 |
| chr2.3 | exon | 37553008 | 37553121 | 37553008 | ID=MS.gene66892.t1.exon3;Parent=MS.gene66892.t1 |
| chr2.3 | CDS | 37553008 | 37553121 | 37553008 | ID=cds.MS.gene66892.t1;Parent=MS.gene66892.t1 |
| chr2.3 | exon | 37552524 | 37552692 | 37552524 | ID=MS.gene66892.t1.exon4;Parent=MS.gene66892.t1 |
| chr2.3 | CDS | 37552524 | 37552692 | 37552524 | ID=cds.MS.gene66892.t1;Parent=MS.gene66892.t1 |
| chr2.3 | exon | 37552364 | 37552432 | 37552364 | ID=MS.gene66892.t1.exon5;Parent=MS.gene66892.t1 |
| chr2.3 | CDS | 37552364 | 37552432 | 37552364 | ID=cds.MS.gene66892.t1;Parent=MS.gene66892.t1 |
| chr2.3 | exon | 37551765 | 37552034 | 37551765 | ID=MS.gene66892.t1.exon6;Parent=MS.gene66892.t1 |
| chr2.3 | CDS | 37551765 | 37552034 | 37551765 | ID=cds.MS.gene66892.t1;Parent=MS.gene66892.t1 |
| Gene Sequence |
| Protein sequence |
