Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78478.t1 | XP_003609675.1 | 88.2 | 566 | 64 | 2 | 1 | 565 | 1 | 564 | 3.80E-271 | 943.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78478.t1 | G7JLH7 | 88.2 | 566 | 64 | 2 | 1 | 565 | 1 | 564 | 2.8e-271 | 943.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049151 | MS.gene78478 | 0.815379 | 9.53E-52 | -1.69E-46 |
| MS.gene049159 | MS.gene78478 | 0.803429 | 3.50E-49 | -1.69E-46 |
| MS.gene049230 | MS.gene78478 | 0.837486 | 5.05E-57 | -1.69E-46 |
| MS.gene049378 | MS.gene78478 | 0.841722 | 4.00E-58 | -1.69E-46 |
| MS.gene049756 | MS.gene78478 | 0.806474 | 8.08E-50 | -1.69E-46 |
| MS.gene050105 | MS.gene78478 | 0.801755 | 7.75E-49 | -1.69E-46 |
| MS.gene050226 | MS.gene78478 | 0.878401 | 2.89E-69 | -1.69E-46 |
| MS.gene050227 | MS.gene78478 | 0.867705 | 1.12E-65 | -1.69E-46 |
| MS.gene050228 | MS.gene78478 | 0.879474 | 1.21E-69 | -1.69E-46 |
| MS.gene050303 | MS.gene78478 | 0.826399 | 2.77E-54 | -1.69E-46 |
| MS.gene050442 | MS.gene78478 | 0.826524 | 2.59E-54 | -1.69E-46 |
| MS.gene050605 | MS.gene78478 | 0.831361 | 1.74E-55 | -1.69E-46 |
| MS.gene050623 | MS.gene78478 | -0.883019 | 6.39E-71 | -1.69E-46 |
| MS.gene050642 | MS.gene78478 | 0.869063 | 4.10E-66 | -1.69E-46 |
| MS.gene050719 | MS.gene78478 | 0.841927 | 3.53E-58 | -1.69E-46 |
| MS.gene050721 | MS.gene78478 | 0.841434 | 4.76E-58 | -1.69E-46 |
| MS.gene050724 | MS.gene78478 | 0.834191 | 3.46E-56 | -1.69E-46 |
| MS.gene050762 | MS.gene78478 | 0.801945 | 7.08E-49 | -1.69E-46 |
| MS.gene050763 | MS.gene78478 | 0.802761 | 4.81E-49 | -1.69E-46 |
| MS.gene050987 | MS.gene78478 | 0.823668 | 1.22E-53 | -1.69E-46 |
| MS.gene051243 | MS.gene78478 | 0.810913 | 9.10E-51 | -1.69E-46 |
| MS.gene051245 | MS.gene78478 | 0.801875 | 7.32E-49 | -1.69E-46 |
| MS.gene051349 | MS.gene78478 | 0.8439 | 1.05E-58 | -1.69E-46 |
| MS.gene051452 | MS.gene78478 | 0.820111 | 8.15E-53 | -1.69E-46 |
| MS.gene051535 | MS.gene78478 | 0.833769 | 4.41E-56 | -1.69E-46 |
| MS.gene051983 | MS.gene78478 | 0.858594 | 7.40E-63 | -1.69E-46 |
| MS.gene052012 | MS.gene78478 | 0.818933 | 1.51E-52 | -1.69E-46 |
| MS.gene052176 | MS.gene78478 | 0.84222 | 2.95E-58 | -1.69E-46 |
| MS.gene052286 | MS.gene78478 | 0.809425 | 1.90E-50 | -1.69E-46 |
| MS.gene052309 | MS.gene78478 | -0.815292 | 9.96E-52 | -1.69E-46 |
| MS.gene052323 | MS.gene78478 | 0.807762 | 4.31E-50 | -1.69E-46 |
| MS.gene052376 | MS.gene78478 | 0.809916 | 1.49E-50 | -1.69E-46 |
| MS.gene052426 | MS.gene78478 | 0.832339 | 1.00E-55 | -1.69E-46 |
| MS.gene052600 | MS.gene78478 | 0.808058 | 3.73E-50 | -1.69E-46 |
| MS.gene052856 | MS.gene78478 | 0.800212 | 1.60E-48 | -1.69E-46 |
| MS.gene052860 | MS.gene78478 | 0.804308 | 2.30E-49 | -1.69E-46 |
| MS.gene052954 | MS.gene78478 | 0.828559 | 8.40E-55 | -1.69E-46 |
| MS.gene053008 | MS.gene78478 | 0.824705 | 6.98E-54 | -1.69E-46 |
| MS.gene053080 | MS.gene78478 | 0.842674 | 2.24E-58 | -1.69E-46 |
| MS.gene053188 | MS.gene78478 | 0.805507 | 1.29E-49 | -1.69E-46 |
| MS.gene053216 | MS.gene78478 | 0.814845 | 1.25E-51 | -1.69E-46 |
| MS.gene054379 | MS.gene78478 | 0.805823 | 1.11E-49 | -1.69E-46 |
| MS.gene054537 | MS.gene78478 | 0.814914 | 1.21E-51 | -1.69E-46 |
| MS.gene054657 | MS.gene78478 | 0.829413 | 5.22E-55 | -1.69E-46 |
| MS.gene054658 | MS.gene78478 | 0.831371 | 1.73E-55 | -1.69E-46 |
| MS.gene054930 | MS.gene78478 | 0.818323 | 2.08E-52 | -1.69E-46 |
| MS.gene054942 | MS.gene78478 | 0.802357 | 5.83E-49 | -1.69E-46 |
| MS.gene05510 | MS.gene78478 | 0.843104 | 1.72E-58 | -1.69E-46 |
| MS.gene055222 | MS.gene78478 | 0.802353 | 5.84E-49 | -1.69E-46 |
| MS.gene055441 | MS.gene78478 | 0.802119 | 6.53E-49 | -1.69E-46 |
| MS.gene055623 | MS.gene78478 | 0.829191 | 5.91E-55 | -1.69E-46 |
| MS.gene055701 | MS.gene78478 | 0.832855 | 7.45E-56 | -1.69E-46 |
| MS.gene056506 | MS.gene78478 | 0.836512 | 8.96E-57 | -1.69E-46 |
| MS.gene056552 | MS.gene78478 | 0.82289 | 1.86E-53 | -1.69E-46 |
| MS.gene056760 | MS.gene78478 | 0.800093 | 1.69E-48 | -1.69E-46 |
| MS.gene056875 | MS.gene78478 | 0.810023 | 1.42E-50 | -1.69E-46 |
| MS.gene056979 | MS.gene78478 | 0.850972 | 1.20E-60 | -1.69E-46 |
| MS.gene057060 | MS.gene78478 | 0.811555 | 6.60E-51 | -1.69E-46 |
| MS.gene057079 | MS.gene78478 | 0.806553 | 7.78E-50 | -1.69E-46 |
| MS.gene057140 | MS.gene78478 | 0.834677 | 2.61E-56 | -1.69E-46 |
| MS.gene057555 | MS.gene78478 | 0.811208 | 7.85E-51 | -1.69E-46 |
| MS.gene05761 | MS.gene78478 | 0.808649 | 2.79E-50 | -1.69E-46 |
| MS.gene057754 | MS.gene78478 | 0.804248 | 2.37E-49 | -1.69E-46 |
| MS.gene057869 | MS.gene78478 | 0.805075 | 1.59E-49 | -1.69E-46 |
| MS.gene05795 | MS.gene78478 | 0.817599 | 3.03E-52 | -1.69E-46 |
| MS.gene058126 | MS.gene78478 | 0.82557 | 4.36E-54 | -1.69E-46 |
| MS.gene058146 | MS.gene78478 | 0.825867 | 3.71E-54 | -1.69E-46 |
| MS.gene058182 | MS.gene78478 | 0.803508 | 3.37E-49 | -1.69E-46 |
| MS.gene058238 | MS.gene78478 | 0.81154 | 6.65E-51 | -1.69E-46 |
| MS.gene058399 | MS.gene78478 | 0.843539 | 1.32E-58 | -1.69E-46 |
| MS.gene058435 | MS.gene78478 | 0.820332 | 7.25E-53 | -1.69E-46 |
| MS.gene058548 | MS.gene78478 | 0.825701 | 4.06E-54 | -1.69E-46 |
| MS.gene058595 | MS.gene78478 | 0.837948 | 3.85E-57 | -1.69E-46 |
| MS.gene059249 | MS.gene78478 | 0.827061 | 1.93E-54 | -1.69E-46 |
| MS.gene059317 | MS.gene78478 | 0.80213 | 6.49E-49 | -1.69E-46 |
| MS.gene059569 | MS.gene78478 | 0.80947 | 1.86E-50 | -1.69E-46 |
| MS.gene05979 | MS.gene78478 | 0.820635 | 6.18E-53 | -1.69E-46 |
| MS.gene059830 | MS.gene78478 | 0.829271 | 5.65E-55 | -1.69E-46 |
| MS.gene060084 | MS.gene78478 | 0.846169 | 2.57E-59 | -1.69E-46 |
| MS.gene060297 | MS.gene78478 | 0.868176 | 7.93E-66 | -1.69E-46 |
| MS.gene060572 | MS.gene78478 | 0.809599 | 1.75E-50 | -1.69E-46 |
| MS.gene060586 | MS.gene78478 | 0.816616 | 5.04E-52 | -1.69E-46 |
| MS.gene060683 | MS.gene78478 | 0.846923 | 1.60E-59 | -1.69E-46 |
| MS.gene060685 | MS.gene78478 | 0.843205 | 1.62E-58 | -1.69E-46 |
| MS.gene060802 | MS.gene78478 | 0.810283 | 1.24E-50 | -1.69E-46 |
| MS.gene060803 | MS.gene78478 | 0.831395 | 1.71E-55 | -1.69E-46 |
| MS.gene060998 | MS.gene78478 | 0.822149 | 2.77E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78478.t1 | MTR_4g119920 | 90.283 | 566 | 52 | 2 | 1 | 565 | 1 | 564 | 0.0 | 992 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78478.t1 | AT4G15820 | 31.862 | 521 | 274 | 16 | 49 | 560 | 10 | 458 | 4.44e-51 | 182 |
Find 132 sgRNAs with CRISPR-Local
Find 215 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTCAATACCATCAATTTC+AGG | 0.186057 | 8.4:+12049000 | None:intergenic |
| TCAAAACGAAGGGGAGAATT+TGG | 0.197015 | 8.4:-12048587 | MS.gene78478:CDS |
| GTCACCCAAATCTTCAAAAT+AGG | 0.266261 | 8.4:+12047476 | None:intergenic |
| TTACCATTGTTTATGCTCTT+AGG | 0.271984 | 8.4:+12048517 | None:intergenic |
| TATTGGAGAAGCAAGGTAAA+AGG | 0.279713 | 8.4:-12049044 | MS.gene78478:CDS |
| AATTGAGGAAATTAAGTTAA+TGG | 0.281372 | 8.4:-12049091 | MS.gene78478:CDS |
| TACGGTGGTATTTATTTGAT+TGG | 0.283525 | 8.4:-12049261 | MS.gene78478:CDS |
| TGAACATTCCAATGGGGATT+TGG | 0.289273 | 8.4:-12049193 | MS.gene78478:CDS |
| GTCCTCAATTCTCTTACTTC+AGG | 0.297519 | 8.4:+12048159 | None:intergenic |
| GATAATGTGGACAGTATAAA+TGG | 0.307121 | 8.4:-12048111 | MS.gene78478:CDS |
| AGCTCGAAGAATTGAGTTAT+TGG | 0.311553 | 8.4:-12049061 | MS.gene78478:CDS |
| AAATCCGTTGACGACGAGTC+TGG | 0.325214 | 8.4:-12048616 | MS.gene78478:CDS |
| TACTGATCATGCAGGAATAT+TGG | 0.330734 | 8.4:-12048713 | MS.gene78478:CDS |
| GATAGAATTGGTTGCGGTAT+TGG | 0.338115 | 8.4:+12049456 | None:intergenic |
| TCAGCAGCATTGCGATTAAA+TGG | 0.340880 | 8.4:-12048919 | MS.gene78478:CDS |
| ACGGTGGTATTTATTTGATT+GGG | 0.344851 | 8.4:-12049260 | MS.gene78478:CDS |
| CAAAATCTAGGACTGATATT+TGG | 0.345469 | 8.4:-12048026 | MS.gene78478:CDS |
| GGTGTTCCATTGGAAGAAAA+AGG | 0.350795 | 8.4:-12048640 | MS.gene78478:CDS |
| TAGTTTAAACTTCACCTCTA+AGG | 0.365761 | 8.4:-12047580 | MS.gene78478:CDS |
| TTCAAACTGTTCGTTACCTT+TGG | 0.370796 | 8.4:-12049227 | MS.gene78478:CDS |
| TACATGTTTAGGTGGTTTCC+CGG | 0.371542 | 8.4:-12048205 | MS.gene78478:intron |
| ATTTAAAAGCCCTTCAACTA+AGG | 0.372274 | 8.4:-12048818 | MS.gene78478:CDS |
| GACAGTATAAATGGCAGTTC+AGG | 0.385031 | 8.4:-12048102 | MS.gene78478:CDS |
| AAATGATGGAAACACCAAAT+AGG | 0.390911 | 8.4:-12048561 | MS.gene78478:CDS |
| AAAACACCAAAGGGATTTCC+AGG | 0.391921 | 8.4:-12048790 | MS.gene78478:CDS |
| AAAGGGAAGAGGAAGAGAAT+GGG | 0.392942 | 8.4:-12049026 | MS.gene78478:CDS |
| ACCTCAAGGTTATGGAAATC+AGG | 0.394652 | 8.4:-12048737 | MS.gene78478:CDS |
| TTCCAGGGACTCAAGATCAT+AGG | 0.395566 | 8.4:-12048774 | MS.gene78478:CDS |
| TGAGTCCCTGGAAATCCCTT+TGG | 0.403399 | 8.4:+12048784 | None:intergenic |
| AAACTTCACCTCTAAGGAAC+AGG | 0.407016 | 8.4:-12047574 | MS.gene78478:CDS |
| TGTGTAAAACCTCAAGGTTA+TGG | 0.419403 | 8.4:-12048745 | MS.gene78478:CDS |
| GTTTGTTGAAGCTGAAGAAT+AGG | 0.422799 | 8.4:-12048963 | MS.gene78478:CDS |
| ATTGGAGAAGCAAGGTAAAA+GGG | 0.426710 | 8.4:-12049043 | MS.gene78478:CDS |
| TCTCCGTGCATTTCGTCGGC+GGG | 0.428642 | 8.4:+12049399 | None:intergenic |
| TGGTGATATGAGTGTGAATC+CGG | 0.433916 | 8.4:-12048875 | MS.gene78478:CDS |
| AAAAGGGAAGAGGAAGAGAA+TGG | 0.434209 | 8.4:-12049027 | MS.gene78478:CDS |
| TTGTAGAAGAGTGGGAGAAA+TGG | 0.435732 | 8.4:+12049482 | None:intergenic |
| TCTTGAGGAGGAGATAGAAT+TGG | 0.446271 | 8.4:+12049444 | None:intergenic |
| AAGTTAAACAAGCAAAATCT+AGG | 0.450684 | 8.4:-12048038 | MS.gene78478:CDS |
| CGAGAAATGAACATTCCAAT+GGG | 0.450769 | 8.4:-12049200 | MS.gene78478:CDS |
| CACCACGAGACGAAAACCTT+TGG | 0.453397 | 8.4:-12049586 | MS.gene78478:CDS |
| AAATGCTTCTGGTGTTCCAT+TGG | 0.455535 | 8.4:-12048650 | MS.gene78478:CDS |
| AGTGGGAGAAATGGATAGAG+AGG | 0.458320 | 8.4:+12049491 | None:intergenic |
| AATCCGTTGACGACGAGTCT+GGG | 0.460792 | 8.4:-12048615 | MS.gene78478:CDS |
| GGAGAATTTGGAAGAAATGA+TGG | 0.461932 | 8.4:-12048575 | MS.gene78478:CDS |
| TAGTAGAAAACAAAAGTTGT+TGG | 0.462900 | 8.4:+12047503 | None:intergenic |
| AGACAGCTTCAACTTTATGC+TGG | 0.464632 | 8.4:-12047164 | MS.gene78478:CDS |
| ATCCTCAAAAGCAACGGTAT+AGG | 0.470890 | 8.4:+12047536 | None:intergenic |
| GGTTTCCCGGAGACTAGTAT+TGG | 0.470982 | 8.4:-12048192 | MS.gene78478:CDS |
| GATGGTATTGAGAAAGAGAT+TGG | 0.471989 | 8.4:-12048991 | MS.gene78478:CDS |
| GTTTCCCGGAGACTAGTATT+GGG | 0.475666 | 8.4:-12048191 | MS.gene78478:CDS |
| ACCCTATGATCTTGAGTCCC+TGG | 0.476198 | 8.4:+12048772 | None:intergenic |
| AATACTAATTCCTCTTTCCC+CGG | 0.481254 | 8.4:+12048856 | None:intergenic |
| GATGAGACTGGCGAATTTGA+AGG | 0.485316 | 8.4:-12049357 | MS.gene78478:CDS |
| ACCTTTGTGACCTTCCTCGT+TGG | 0.491487 | 8.4:+12047608 | None:intergenic |
| TCCAGGGACTCAAGATCATA+GGG | 0.496717 | 8.4:-12048773 | MS.gene78478:CDS |
| GACATCCCAATACTAGTCTC+CGG | 0.497076 | 8.4:+12048186 | None:intergenic |
| AATGGGGATCCTGAAATTGA+TGG | 0.510509 | 8.4:-12049009 | MS.gene78478:CDS |
| GAGTGTGAATCCGGGGAAAG+AGG | 0.511049 | 8.4:-12048866 | MS.gene78478:CDS |
| CGGTGGTATTTATTTGATTG+GGG | 0.515675 | 8.4:-12049259 | MS.gene78478:CDS |
| TGGAGGATCAATTAGTAGAA+AGG | 0.517245 | 8.4:-12049116 | MS.gene78478:CDS |
| ATCTTCTCCGTGCATTTCGT+CGG | 0.520605 | 8.4:+12049395 | None:intergenic |
| TATTCTTACTTGTATTGACA+TGG | 0.522256 | 8.4:+12047431 | None:intergenic |
| GACAGCTTCAACTTTATGCT+GGG | 0.524397 | 8.4:-12047163 | MS.gene78478:CDS |
| GATCATGCAGGAATATTGGA+TGG | 0.526768 | 8.4:-12048709 | MS.gene78478:CDS |
| TTCTCCGTGCATTTCGTCGG+CGG | 0.526838 | 8.4:+12049398 | None:intergenic |
| ACTCACTTCCAAATCCCCAT+TGG | 0.526917 | 8.4:+12049185 | None:intergenic |
| ATTGAGTTATTGGAGAAGCA+AGG | 0.528404 | 8.4:-12049051 | MS.gene78478:CDS |
| AGAATTGGTTGCGGTATTGG+TGG | 0.529811 | 8.4:+12049459 | None:intergenic |
| TATTGACATGGGAACTGCAT+TGG | 0.531084 | 8.4:+12047443 | None:intergenic |
| GAAGCAAGGTAAAAGGGAAG+AGG | 0.534912 | 8.4:-12049037 | MS.gene78478:CDS |
| GGGATTTGGAAGTGAGTGAA+AGG | 0.535597 | 8.4:-12049179 | MS.gene78478:CDS |
| TATTGGTGGTTGTAGAAGAG+TGG | 0.541065 | 8.4:+12049473 | None:intergenic |
| AATCTAGGACTGATATTTGG+TGG | 0.542478 | 8.4:-12048023 | MS.gene78478:CDS |
| GCTGGAGCTGTTGATGAGAC+TGG | 0.544574 | 8.4:-12049369 | MS.gene78478:CDS |
| AAGGGAAGAGGAAGAGAATG+GGG | 0.545194 | 8.4:-12049025 | MS.gene78478:CDS |
| TTTCCCAGACTCGTCGTCAA+CGG | 0.546358 | 8.4:+12048612 | None:intergenic |
| GTTCATTTCTCGAATTCCAA+AGG | 0.547806 | 8.4:+12049211 | None:intergenic |
| GGAAATTAAGTTAATGGCGA+GGG | 0.547864 | 8.4:-12049085 | MS.gene78478:CDS |
| ATTAGTAGAAAGGAAAATTG+AGG | 0.550474 | 8.4:-12049106 | MS.gene78478:CDS |
| TCGAGAAATGAACATTCCAA+TGG | 0.550786 | 8.4:-12049201 | MS.gene78478:CDS |
| AAGTGAGTGAAAGGGAAAAG+AGG | 0.554130 | 8.4:-12049170 | MS.gene78478:CDS |
| ACATCCCAATACTAGTCTCC+GGG | 0.554325 | 8.4:+12048187 | None:intergenic |
| GTGGGAGAAATGGATAGAGA+GGG | 0.555618 | 8.4:+12049492 | None:intergenic |
| CCAAATAGGAAAACAAAGGA+TGG | 0.556273 | 8.4:-12048547 | MS.gene78478:CDS |
| ATTGGTGGTTGTAGAAGAGT+GGG | 0.556871 | 8.4:+12049474 | None:intergenic |
| CGTGGAAATTCTGCTGGTGG+TGG | 0.556967 | 8.4:-12048895 | MS.gene78478:CDS |
| ATCATGCAGGAATATTGGAT+GGG | 0.560538 | 8.4:-12048708 | MS.gene78478:CDS |
| GTCTCGTGGTGAATGGCGCA+TGG | 0.560887 | 8.4:+12049598 | None:intergenic |
| AATGAAGAAATAATATCTCA+TGG | 0.563546 | 8.4:-12047212 | MS.gene78478:CDS |
| GCATTGCGATTAAATGGTCG+TGG | 0.566838 | 8.4:-12048913 | MS.gene78478:CDS |
| ATTCTTACTTGTATTGACAT+GGG | 0.568941 | 8.4:+12047432 | None:intergenic |
| GTTTCGTGTGTAAAACCTCA+AGG | 0.574035 | 8.4:-12048751 | MS.gene78478:CDS |
| ACACAGAGTTCATGTTCTTG+AGG | 0.576458 | 8.4:+12049429 | None:intergenic |
| CTGGGAAAGTTCAAAACGAA+GGG | 0.576479 | 8.4:-12048597 | MS.gene78478:CDS |
| GGAGGAGATAGAATTGGTTG+CGG | 0.577051 | 8.4:+12049450 | None:intergenic |
| ACCTGATTTCCATAACCTTG+AGG | 0.579577 | 8.4:+12048736 | None:intergenic |
| AAAACAAAAGTTGTTGGCAT+CGG | 0.581793 | 8.4:+12047509 | None:intergenic |
| AATCAGGTTACTGATCATGC+AGG | 0.583737 | 8.4:-12048721 | MS.gene78478:CDS |
| CAAAGAGGCTCCAACGAGGA+AGG | 0.587696 | 8.4:-12047618 | MS.gene78478:CDS |
| AATGGTCGTGGAAATTCTGC+TGG | 0.593329 | 8.4:-12048901 | MS.gene78478:CDS |
| AGGAAATTAAGTTAATGGCG+AGG | 0.593697 | 8.4:-12049086 | MS.gene78478:CDS |
| ATTGAGGACACAAAACTCCC+AGG | 0.597674 | 8.4:-12048145 | MS.gene78478:CDS |
| GCTACTAACTGATGTTGAGA+TGG | 0.601272 | 8.4:-12047138 | MS.gene78478:CDS |
| TTTGAAGAGACTATAACCAA+AGG | 0.604229 | 8.4:+12049570 | None:intergenic |
| ATGCACGGAGAAGATATCGC+TGG | 0.604763 | 8.4:-12049387 | MS.gene78478:CDS |
| CAGAGTTCATGTTCTTGAGG+AGG | 0.605301 | 8.4:+12049432 | None:intergenic |
| TTGAGGACACAAAACTCCCA+GGG | 0.605879 | 8.4:-12048144 | MS.gene78478:CDS |
| GAATAGGATTAAGAGTAACA+AGG | 0.605959 | 8.4:-12048947 | MS.gene78478:CDS |
| TGAAGGATTACGAGTGTCCG+TGG | 0.607470 | 8.4:-12049340 | MS.gene78478:CDS |
| CTCCGTGCATTTCGTCGGCG+GGG | 0.609299 | 8.4:+12049400 | None:intergenic |
| GGTGATATGAGTGTGAATCC+GGG | 0.618411 | 8.4:-12048874 | MS.gene78478:CDS |
| GGATTTGGAAGTGAGTGAAA+GGG | 0.618662 | 8.4:-12049178 | MS.gene78478:CDS |
| CACCTGAAGTAAGAGAATTG+AGG | 0.625819 | 8.4:-12048161 | MS.gene78478:CDS |
| ATAAATGGCAGTTCAGGACA+AGG | 0.628328 | 8.4:-12048096 | MS.gene78478:CDS |
| TCATGCAGGAATATTGGATG+GGG | 0.628651 | 8.4:-12048707 | MS.gene78478:CDS |
| GGCCTGATCCTCAAAAGCAA+CGG | 0.638889 | 8.4:+12047530 | None:intergenic |
| ATCCCCGCCGACGAAATGCA+CGG | 0.651813 | 8.4:-12049402 | MS.gene78478:CDS |
| AACACCAAATAGGAAAACAA+AGG | 0.654980 | 8.4:-12048551 | MS.gene78478:CDS |
| TCTGGGAAAGTTCAAAACGA+AGG | 0.655636 | 8.4:-12048598 | MS.gene78478:CDS |
| AAGGTTATTCTCATGCAAAG+AGG | 0.664120 | 8.4:-12047633 | MS.gene78478:CDS |
| TGGTGGGAATGGGAAAACTG+TGG | 0.665787 | 8.4:-12049136 | MS.gene78478:CDS |
| TCCAACGAGGAAGGTCACAA+AGG | 0.682997 | 8.4:-12047609 | MS.gene78478:CDS |
| AAACACCAAAGGGATTTCCA+GGG | 0.684920 | 8.4:-12048789 | MS.gene78478:CDS |
| GGTCGTGGAAATTCTGCTGG+TGG | 0.691888 | 8.4:-12048898 | MS.gene78478:CDS |
| GTGATATGAGTGTGAATCCG+GGG | 0.699425 | 8.4:-12048873 | MS.gene78478:CDS |
| TGGGAAAGTTCAAAACGAAG+GGG | 0.713239 | 8.4:-12048596 | MS.gene78478:CDS |
| TGGGAATGGGAAAACTGTGG+AGG | 0.714382 | 8.4:-12049133 | MS.gene78478:CDS |
| GAGAAATGAACATTCCAATG+GGG | 0.714996 | 8.4:-12049199 | MS.gene78478:CDS |
| ACACCTAAGAGCATAAACAA+TGG | 0.716598 | 8.4:-12048520 | MS.gene78478:intron |
| CACATACTAGAACATAACGT+AGG | 0.719905 | 8.4:+12047995 | None:intergenic |
| CATGCAAAGAGGCTCCAACG+AGG | 0.752490 | 8.4:-12047622 | MS.gene78478:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATTATATATTGGAATTA+TGG | - | chr8.4:12048359-12048378 | MS.gene78478:intron | 10.0% |
| !! | AATGAAGAAATAATATCTCA+TGG | - | chr8.4:12049509-12049528 | MS.gene78478:CDS | 20.0% |
| !! | AATTGAGGAAATTAAGTTAA+TGG | - | chr8.4:12047630-12047649 | MS.gene78478:CDS | 20.0% |
| !! | GCTCGAAAATTATTATATAT+TGG | - | chr8.4:12048351-12048370 | MS.gene78478:intron | 20.0% |
| !!! | AAATATTTTGAATTGCCTTT+TGG | - | chr8.4:12048295-12048314 | MS.gene78478:intron | 20.0% |
| !!! | ATATAATAATTTTCGAGCAA+CGG | + | chr8.4:12048349-12048368 | None:intergenic | 20.0% |
| !!! | GAGTTATTTTTTACATGTTT+AGG | - | chr8.4:12048505-12048524 | MS.gene78478:intron | 20.0% |
| !!! | TGTGTAATTTTATTTGGTAT+AGG | - | chr8.4:12049445-12049464 | MS.gene78478:CDS | 20.0% |
| !!! | TTATTTTTTACATGTTTAGG+TGG | - | chr8.4:12048508-12048527 | MS.gene78478:intron | 20.0% |
| ! | AAATAAAATTACACACACAC+TGG | + | chr8.4:12049440-12049459 | None:intergenic | 25.0% |
| ! | AAGTTAAACAAGCAAAATCT+AGG | - | chr8.4:12048683-12048702 | MS.gene78478:CDS | 25.0% |
| ! | AATTTCAATTAACAAGTGCA+TGG | + | chr8.4:12049388-12049407 | None:intergenic | 25.0% |
| ! | AGCATACATAAAAAACCAAA+AGG | + | chr8.4:12048313-12048332 | None:intergenic | 25.0% |
| ! | ATTAGTAGAAAGGAAAATTG+AGG | - | chr8.4:12047615-12047634 | MS.gene78478:CDS | 25.0% |
| ! | GAGTATATTTATTGCTTTGT+AGG | - | chr8.4:12049481-12049500 | MS.gene78478:CDS | 25.0% |
| ! | TAGTAGAAAACAAAAGTTGT+TGG | + | chr8.4:12049221-12049240 | None:intergenic | 25.0% |
| !! | AAACAACGAAGTAGTATTTT+CGG | + | chr8.4:12048823-12048842 | None:intergenic | 25.0% |
| !! | AAATATACTCCTTTTAGACA+TGG | + | chr8.4:12049471-12049490 | None:intergenic | 25.0% |
| !! | AGTGTGTGTGTAATTTTATT+TGG | - | chr8.4:12049439-12049458 | MS.gene78478:CDS | 25.0% |
| !! | ATTCTTACTTGTATTGACAT+GGG | + | chr8.4:12049292-12049311 | None:intergenic | 25.0% |
| !! | TATTCTTACTTGTATTGACA+TGG | + | chr8.4:12049293-12049312 | None:intergenic | 25.0% |
| !! | TTGACTTTGTTGAAGTTTTA+AGG | + | chr8.4:12048909-12048928 | None:intergenic | 25.0% |
| !!! | AGAATCCTATTTTGAAGATT+TGG | - | chr8.4:12049240-12049259 | MS.gene78478:CDS | 25.0% |
| !!! | AGATTTCTTTTGTTTGCATT+GGG | - | chr8.4:12048968-12048987 | MS.gene78478:CDS | 25.0% |
| !!! | AGATTTTGCTTGTTTAACTT+TGG | + | chr8.4:12048683-12048702 | None:intergenic | 25.0% |
| !!! | GAATCCTATTTTGAAGATTT+GGG | - | chr8.4:12049241-12049260 | MS.gene78478:CDS | 25.0% |
| !!! | TTTATGTATGCTGTTACTTT+TGG | - | chr8.4:12048321-12048340 | MS.gene78478:intron | 25.0% |
| AAAACAAAAGTTGTTGGCAT+CGG | + | chr8.4:12049215-12049234 | None:intergenic | 30.0% | |
| AACACCAAATAGGAAAACAA+AGG | - | chr8.4:12048170-12048189 | MS.gene78478:CDS | 30.0% | |
| AAGAAGTAATTAGCGAAGAT+AGG | - | chr8.4:12048454-12048473 | MS.gene78478:intron | 30.0% | |
| ACGGTGGTATTTATTTGATT+GGG | - | chr8.4:12047461-12047480 | MS.gene78478:CDS | 30.0% | |
| ATGGGAAATAGACATATGTT+TGG | - | chr8.4:12048994-12049013 | MS.gene78478:CDS | 30.0% | |
| ATTTAAAAGCCCTTCAACTA+AGG | - | chr8.4:12047903-12047922 | MS.gene78478:intron | 30.0% | |
| CACAAAGAGATATGATTTCA+TGG | + | chr8.4:12049068-12049087 | None:intergenic | 30.0% | |
| GAAATCATATCTCTTTGTGA+AGG | - | chr8.4:12049069-12049088 | MS.gene78478:CDS | 30.0% | |
| GAATAGGATTAAGAGTAACA+AGG | - | chr8.4:12047774-12047793 | MS.gene78478:intron | 30.0% | |
| GATAATGTGGACAGTATAAA+TGG | - | chr8.4:12048610-12048629 | MS.gene78478:CDS | 30.0% | |
| GTTATAGTCTCTTCAAAAAC+TGG | - | chr8.4:12047157-12047176 | MS.gene78478:CDS | 30.0% | |
| TACAGCTAGAAAATTTCACA+AGG | + | chr8.4:12048862-12048881 | None:intergenic | 30.0% | |
| TACGGTGGTATTTATTTGAT+TGG | - | chr8.4:12047460-12047479 | MS.gene78478:CDS | 30.0% | |
| TAGTTTAAACTTCACCTCTA+AGG | - | chr8.4:12049141-12049160 | MS.gene78478:CDS | 30.0% | |
| TCAACAAAGTCAAATATCCT+AGG | - | chr8.4:12048916-12048935 | MS.gene78478:CDS | 30.0% | |
| TCGTATCAGTTATTGTCAAT+TGG | - | chr8.4:12048260-12048279 | MS.gene78478:intron | 30.0% | |
| TGGATATGCTACTGAAAAAT+AGG | + | chr8.4:12048773-12048792 | None:intergenic | 30.0% | |
| TTACCATTGTTTATGCTCTT+AGG | + | chr8.4:12048207-12048226 | None:intergenic | 30.0% | |
| TTCTCAATACCATCAATTTC+AGG | + | chr8.4:12047724-12047743 | None:intergenic | 30.0% | |
| TTTGAAGAGACTATAACCAA+AGG | + | chr8.4:12047154-12047173 | None:intergenic | 30.0% | |
| TTTGTTTGCATTGGGTTTAT+GGG | - | chr8.4:12048976-12048995 | MS.gene78478:CDS | 30.0% | |
| ! | AAATGATGGAAACACCAAAT+AGG | - | chr8.4:12048160-12048179 | MS.gene78478:CDS | 30.0% |
| ! | AACAACGAAGTAGTATTTTC+GGG | + | chr8.4:12048822-12048841 | None:intergenic | 30.0% |
| ! | ATTATCCTTTTCAAAACCCT+GGG | + | chr8.4:12048596-12048615 | None:intergenic | 30.0% |
| ! | CAAAATCTAGGACTGATATT+TGG | - | chr8.4:12048695-12048714 | MS.gene78478:CDS | 30.0% |
| ! | GAAAAGAGGAACATTTTGTT+TGG | - | chr8.4:12047565-12047584 | MS.gene78478:CDS | 30.0% |
| ! | GATTTTCCTTTTTCTTCCAA+TGG | + | chr8.4:12048090-12048109 | None:intergenic | 30.0% |
| ! | GCTAAGGAGATTTTCAAATA+CGG | - | chr8.4:12047442-12047461 | MS.gene78478:CDS | 30.0% |
| ! | TTCACAAGGTTCTTTAAGAA+AGG | + | chr8.4:12048848-12048867 | None:intergenic | 30.0% |
| !! | GAGATTTCTTTTGTTTGCAT+TGG | - | chr8.4:12048967-12048986 | MS.gene78478:CDS | 30.0% |
| !! | TCAACTGTCAACTTTTGTTT+TGG | - | chr8.4:12048409-12048428 | MS.gene78478:intron | 30.0% |
| !! | TTTTGTTTGCATTGGGTTTA+TGG | - | chr8.4:12048975-12048994 | MS.gene78478:CDS | 30.0% |
| !! | TTTTTGTAGCCTTAGTTGAA+GGG | + | chr8.4:12047915-12047934 | None:intergenic | 30.0% |
| !!! | GTTAGGGTTTTGAGAATTTT+CGG | + | chr8.4:12047205-12047224 | None:intergenic | 30.0% |
| !!! | TTTTGGTAATGTTTCTGCTA+AGG | - | chr8.4:12047426-12047445 | MS.gene78478:intron | 30.0% |
| AAGGCTACAAAAACACCAAA+GGG | - | chr8.4:12047922-12047941 | MS.gene78478:intron | 35.0% | |
| AAGGTTATTCTCATGCAAAG+AGG | - | chr8.4:12049088-12049107 | MS.gene78478:CDS | 35.0% | |
| AATACTAATTCCTCTTTCCC+CGG | + | chr8.4:12047868-12047887 | None:intergenic | 35.0% | |
| AGAGATATGATTTCATGGTC+AGG | + | chr8.4:12049063-12049082 | None:intergenic | 35.0% | |
| AGCTCGAAGAATTGAGTTAT+TGG | - | chr8.4:12047660-12047679 | MS.gene78478:intron | 35.0% | |
| AGGAAATTAAGTTAATGGCG+AGG | - | chr8.4:12047635-12047654 | MS.gene78478:intron | 35.0% | |
| ATCATGCAGGAATATTGGAT+GGG | - | chr8.4:12048013-12048032 | MS.gene78478:CDS | 35.0% | |
| ATTGAGTTATTGGAGAAGCA+AGG | - | chr8.4:12047670-12047689 | MS.gene78478:intron | 35.0% | |
| ATTGGAGAAGCAAGGTAAAA+GGG | - | chr8.4:12047678-12047697 | MS.gene78478:intron | 35.0% | |
| CACATACTAGAACATAACGT+AGG | + | chr8.4:12048729-12048748 | None:intergenic | 35.0% | |
| CCAAATAGGAAAACAAAGGA+TGG | - | chr8.4:12048174-12048193 | MS.gene78478:CDS | 35.0% | |
| CGAGAAATGAACATTCCAAT+GGG | - | chr8.4:12047521-12047540 | MS.gene78478:CDS | 35.0% | |
| CGGTGGTATTTATTTGATTG+GGG | - | chr8.4:12047462-12047481 | MS.gene78478:CDS | 35.0% | |
| GAGAAATGAACATTCCAATG+GGG | - | chr8.4:12047522-12047541 | MS.gene78478:CDS | 35.0% | |
| GGAAATAGACATATGTTTGG+CGG | - | chr8.4:12048997-12049016 | MS.gene78478:CDS | 35.0% | |
| GGAAATTAAGTTAATGGCGA+GGG | - | chr8.4:12047636-12047655 | MS.gene78478:intron | 35.0% | |
| GGAGAATTTGGAAGAAATGA+TGG | - | chr8.4:12048146-12048165 | MS.gene78478:CDS | 35.0% | |
| GTCACCCAAATCTTCAAAAT+AGG | + | chr8.4:12049248-12049267 | None:intergenic | 35.0% | |
| GTTCATTTCTCGAATTCCAA+AGG | + | chr8.4:12047513-12047532 | None:intergenic | 35.0% | |
| TAAGGCTACAAAAACACCAA+AGG | - | chr8.4:12047921-12047940 | MS.gene78478:intron | 35.0% | |
| TACTGATCATGCAGGAATAT+TGG | - | chr8.4:12048008-12048027 | MS.gene78478:CDS | 35.0% | |
| TATTGGAGAAGCAAGGTAAA+AGG | - | chr8.4:12047677-12047696 | MS.gene78478:intron | 35.0% | |
| TCGAGAAATGAACATTCCAA+TGG | - | chr8.4:12047520-12047539 | MS.gene78478:CDS | 35.0% | |
| TCTCTTCAAAAACTGGTCAA+AGG | - | chr8.4:12047164-12047183 | MS.gene78478:CDS | 35.0% | |
| TGGAGGATCAATTAGTAGAA+AGG | - | chr8.4:12047605-12047624 | MS.gene78478:CDS | 35.0% | |
| TGTGTAAAACCTCAAGGTTA+TGG | - | chr8.4:12047976-12047995 | MS.gene78478:intron | 35.0% | |
| TTCAAACTGTTCGTTACCTT+TGG | - | chr8.4:12047494-12047513 | MS.gene78478:CDS | 35.0% | |
| TTCAGTAGCATATCCATACA+GGG | - | chr8.4:12048777-12048796 | MS.gene78478:CDS | 35.0% | |
| TTTCAGTAGCATATCCATAC+AGG | - | chr8.4:12048776-12048795 | MS.gene78478:CDS | 35.0% | |
| ! | AAGGAGATTTTCAAATACGG+TGG | - | chr8.4:12047445-12047464 | MS.gene78478:CDS | 35.0% |
| ! | AATCTAGGACTGATATTTGG+TGG | - | chr8.4:12048698-12048717 | MS.gene78478:CDS | 35.0% |
| ! | ACACCTAAGAGCATAAACAA+TGG | - | chr8.4:12048201-12048220 | MS.gene78478:intron | 35.0% |
| ! | ATTTTGTTCCTGTTCCTTAG+AGG | + | chr8.4:12049158-12049177 | None:intergenic | 35.0% |
| ! | CATTATCCTTTTCAAAACCC+TGG | + | chr8.4:12048597-12048616 | None:intergenic | 35.0% |
| ! | GATGGTATTGAGAAAGAGAT+TGG | - | chr8.4:12047730-12047749 | MS.gene78478:intron | 35.0% |
| ! | GCAAAAGACAATCGTGTTTT+TGG | - | chr8.4:12047409-12047428 | MS.gene78478:intron | 35.0% |
| ! | GTTTGTTGAAGCTGAAGAAT+AGG | - | chr8.4:12047758-12047777 | MS.gene78478:intron | 35.0% |
| !! | AACATTTTGTTTGGTGGGAA+TGG | - | chr8.4:12047574-12047593 | MS.gene78478:CDS | 35.0% |
| !! | AAGAGGAACATTTTGTTTGG+TGG | - | chr8.4:12047568-12047587 | MS.gene78478:CDS | 35.0% |
| !! | ACATTTTGTTTGGTGGGAAT+GGG | - | chr8.4:12047575-12047594 | MS.gene78478:CDS | 35.0% |
| !! | AGAGGAACATTTTGTTTGGT+GGG | - | chr8.4:12047569-12047588 | MS.gene78478:CDS | 35.0% |
| !! | ATTGTCTTTTGCTGTATCCA+CGG | + | chr8.4:12047401-12047420 | None:intergenic | 35.0% |
| !! | GTTTTTGTAGCCTTAGTTGA+AGG | + | chr8.4:12047916-12047935 | None:intergenic | 35.0% |
| !!! | AACACCAGAAGCATTTTTGT+GGG | + | chr8.4:12048067-12048086 | None:intergenic | 35.0% |
| !!! | ACTGTCAACTTTTGTTTTGG+TGG | - | chr8.4:12048412-12048431 | MS.gene78478:intron | 35.0% |
| !!! | CCATCCTTTGTTTTCCTATT+TGG | + | chr8.4:12048177-12048196 | None:intergenic | 35.0% |
| !!! | GGGTTTTGAAAAGGATAATG+TGG | - | chr8.4:12048597-12048616 | MS.gene78478:CDS | 35.0% |
| AAAACACCAAAGGGATTTCC+AGG | - | chr8.4:12047931-12047950 | MS.gene78478:intron | 40.0% | |
| AAAAGGGAAGAGGAAGAGAA+TGG | - | chr8.4:12047694-12047713 | MS.gene78478:intron | 40.0% | |
| AAACACCAAAGGGATTTCCA+GGG | - | chr8.4:12047932-12047951 | MS.gene78478:intron | 40.0% | |
| AAAGGGAAGAGGAAGAGAAT+GGG | - | chr8.4:12047695-12047714 | MS.gene78478:intron | 40.0% | |
| AAATGCTTCTGGTGTTCCAT+TGG | - | chr8.4:12048071-12048090 | MS.gene78478:CDS | 40.0% | |
| AAGAAAAGATCCTACGACCT+AGG | + | chr8.4:12048936-12048955 | None:intergenic | 40.0% | |
| AAGTGAGTGAAAGGGAAAAG+AGG | - | chr8.4:12047551-12047570 | MS.gene78478:CDS | 40.0% | |
| AATCAGGTTACTGATCATGC+AGG | - | chr8.4:12048000-12048019 | MS.gene78478:intron | 40.0% | |
| AATGGGGATCCTGAAATTGA+TGG | - | chr8.4:12047712-12047731 | MS.gene78478:intron | 40.0% | |
| ACACAGAGTTCATGTTCTTG+AGG | + | chr8.4:12047295-12047314 | None:intergenic | 40.0% | |
| ACCTCAAGGTTATGGAAATC+AGG | - | chr8.4:12047984-12048003 | MS.gene78478:intron | 40.0% | |
| ACCTGATTTCCATAACCTTG+AGG | + | chr8.4:12047988-12048007 | None:intergenic | 40.0% | |
| AGACAGCTTCAACTTTATGC+TGG | - | chr8.4:12049557-12049576 | MS.gene78478:CDS | 40.0% | |
| AGGAGCAAATGGATACATGT+AGG | + | chr8.4:12049043-12049062 | None:intergenic | 40.0% | |
| AGTCAAATATCCTAGGTCGT+AGG | - | chr8.4:12048923-12048942 | MS.gene78478:CDS | 40.0% | |
| ATAAATGGCAGTTCAGGACA+AGG | - | chr8.4:12048625-12048644 | MS.gene78478:CDS | 40.0% | |
| ATACCTAAGAAGTCCCTGTA+TGG | + | chr8.4:12048793-12048812 | None:intergenic | 40.0% | |
| ATCCTCAAAAGCAACGGTAT+AGG | + | chr8.4:12049188-12049207 | None:intergenic | 40.0% | |
| ATTTCATGGTCAGGAGCAAA+TGG | + | chr8.4:12049054-12049073 | None:intergenic | 40.0% | |
| CACCTGAAGTAAGAGAATTG+AGG | - | chr8.4:12048560-12048579 | MS.gene78478:CDS | 40.0% | |
| CTGGGAAAGTTCAAAACGAA+GGG | - | chr8.4:12048124-12048143 | MS.gene78478:CDS | 40.0% | |
| GACAGCTTCAACTTTATGCT+GGG | - | chr8.4:12049558-12049577 | MS.gene78478:CDS | 40.0% | |
| GACAGTATAAATGGCAGTTC+AGG | - | chr8.4:12048619-12048638 | MS.gene78478:CDS | 40.0% | |
| GATAGAATTGGTTGCGGTAT+TGG | + | chr8.4:12047268-12047287 | None:intergenic | 40.0% | |
| GATCATGCAGGAATATTGGA+TGG | - | chr8.4:12048012-12048031 | MS.gene78478:CDS | 40.0% | |
| GCTACTAACTGATGTTGAGA+TGG | - | chr8.4:12049583-12049602 | MS.gene78478:CDS | 40.0% | |
| GGAGCAAATGGATACATGTA+GGG | + | chr8.4:12049042-12049061 | None:intergenic | 40.0% | |
| GGATTTGGAAGTGAGTGAAA+GGG | - | chr8.4:12047543-12047562 | MS.gene78478:CDS | 40.0% | |
| GGTGTTCCATTGGAAGAAAA+AGG | - | chr8.4:12048081-12048100 | MS.gene78478:CDS | 40.0% | |
| GTCCTCAATTCTCTTACTTC+AGG | + | chr8.4:12048565-12048584 | None:intergenic | 40.0% | |
| GTTTCGTGTGTAAAACCTCA+AGG | - | chr8.4:12047970-12047989 | MS.gene78478:intron | 40.0% | |
| TACATGTTTAGGTGGTTTCC+CGG | - | chr8.4:12048516-12048535 | MS.gene78478:intron | 40.0% | |
| TACTTCTTGTAGCAAACACG+TGG | + | chr8.4:12048442-12048461 | None:intergenic | 40.0% | |
| TATCCATACAGGGACTTCTT+AGG | - | chr8.4:12048787-12048806 | MS.gene78478:CDS | 40.0% | |
| TATTGACATGGGAACTGCAT+TGG | + | chr8.4:12049281-12049300 | None:intergenic | 40.0% | |
| TCAAAACGAAGGGGAGAATT+TGG | - | chr8.4:12048134-12048153 | MS.gene78478:CDS | 40.0% | |
| TCAGCAGCATTGCGATTAAA+TGG | - | chr8.4:12047802-12047821 | MS.gene78478:intron | 40.0% | |
| TCATGCAGGAATATTGGATG+GGG | - | chr8.4:12048014-12048033 | MS.gene78478:CDS | 40.0% | |
| TCTGGGAAAGTTCAAAACGA+AGG | - | chr8.4:12048123-12048142 | MS.gene78478:CDS | 40.0% | |
| TCTTGAGGAGGAGATAGAAT+TGG | + | chr8.4:12047280-12047299 | None:intergenic | 40.0% | |
| TGAACATTCCAATGGGGATT+TGG | - | chr8.4:12047528-12047547 | MS.gene78478:CDS | 40.0% | |
| TGGGAAAGTTCAAAACGAAG+GGG | - | chr8.4:12048125-12048144 | MS.gene78478:CDS | 40.0% | |
| TGGTATAGGCCATGTCTAAA+AGG | - | chr8.4:12049459-12049478 | MS.gene78478:CDS | 40.0% | |
| TGGTGATATGAGTGTGAATC+CGG | - | chr8.4:12047846-12047865 | MS.gene78478:intron | 40.0% | |
| TTGTAGAAGAGTGGGAGAAA+TGG | + | chr8.4:12047242-12047261 | None:intergenic | 40.0% | |
| ! | AAACTTCACCTCTAAGGAAC+AGG | - | chr8.4:12049147-12049166 | MS.gene78478:CDS | 40.0% |
| ! | ATTGGTGGTTGTAGAAGAGT+GGG | + | chr8.4:12047250-12047269 | None:intergenic | 40.0% |
| ! | TAGCGAAGATAGGTTTGCTT+GGG | - | chr8.4:12048464-12048483 | MS.gene78478:intron | 40.0% |
| ! | TATTGGTGGTTGTAGAAGAG+TGG | + | chr8.4:12047251-12047270 | None:intergenic | 40.0% |
| ! | TTAGCGAAGATAGGTTTGCT+TGG | - | chr8.4:12048463-12048482 | MS.gene78478:intron | 40.0% |
| !!! | AAACTCCCAGGGTTTTGAAA+AGG | - | chr8.4:12048588-12048607 | MS.gene78478:CDS | 40.0% |
| !!! | GAACACCAGAAGCATTTTTG+TGG | + | chr8.4:12048068-12048087 | None:intergenic | 40.0% |
| !!! | GGATAGAGAGGGTTTTGTTA+GGG | + | chr8.4:12047221-12047240 | None:intergenic | 40.0% |
| !!! | TGGATAGAGAGGGTTTTGTT+AGG | + | chr8.4:12047222-12047241 | None:intergenic | 40.0% |
| !!! | TTCCTATACCGTTGCTTTTG+AGG | - | chr8.4:12049183-12049202 | MS.gene78478:CDS | 40.0% |
| AAGGGAAGAGGAAGAGAATG+GGG | - | chr8.4:12047696-12047715 | MS.gene78478:intron | 45.0% | |
| AATGGTCGTGGAAATTCTGC+TGG | - | chr8.4:12047820-12047839 | MS.gene78478:intron | 45.0% | |
| ACTCACTTCCAAATCCCCAT+TGG | + | chr8.4:12047539-12047558 | None:intergenic | 45.0% | |
| AGTGGGAGAAATGGATAGAG+AGG | + | chr8.4:12047233-12047252 | None:intergenic | 45.0% | |
| ATCTTCTCCGTGCATTTCGT+CGG | + | chr8.4:12047329-12047348 | None:intergenic | 45.0% | |
| ATTGAGGACACAAAACTCCC+AGG | - | chr8.4:12048576-12048595 | MS.gene78478:CDS | 45.0% | |
| CAGAGTTCATGTTCTTGAGG+AGG | + | chr8.4:12047292-12047311 | None:intergenic | 45.0% | |
| GAAGCAAGGTAAAAGGGAAG+AGG | - | chr8.4:12047684-12047703 | MS.gene78478:intron | 45.0% | |
| GATGAGACTGGCGAATTTGA+AGG | - | chr8.4:12047364-12047383 | MS.gene78478:intron | 45.0% | |
| GCATTGCGATTAAATGGTCG+TGG | - | chr8.4:12047808-12047827 | MS.gene78478:intron | 45.0% | |
| GGAGGAGATAGAATTGGTTG+CGG | + | chr8.4:12047274-12047293 | None:intergenic | 45.0% | |
| GGGATTTGGAAGTGAGTGAA+AGG | - | chr8.4:12047542-12047561 | MS.gene78478:CDS | 45.0% | |
| GGTGATATGAGTGTGAATCC+GGG | - | chr8.4:12047847-12047866 | MS.gene78478:intron | 45.0% | |
| GTCACCCACAAAAATGCTTC+TGG | - | chr8.4:12048060-12048079 | MS.gene78478:CDS | 45.0% | |
| GTGATATGAGTGTGAATCCG+GGG | - | chr8.4:12047848-12047867 | MS.gene78478:intron | 45.0% | |
| GTGGGAGAAATGGATAGAGA+GGG | + | chr8.4:12047232-12047251 | None:intergenic | 45.0% | |
| GTTTCCCGGAGACTAGTATT+GGG | - | chr8.4:12048530-12048549 | MS.gene78478:CDS | 45.0% | |
| TCCAGGGACTCAAGATCATA+GGG | - | chr8.4:12047948-12047967 | MS.gene78478:intron | 45.0% | |
| TTCCAGGGACTCAAGATCAT+AGG | - | chr8.4:12047947-12047966 | MS.gene78478:intron | 45.0% | |
| TTGAGGACACAAAACTCCCA+GGG | - | chr8.4:12048577-12048596 | MS.gene78478:CDS | 45.0% | |
| ! | AACCAAAGGTTTTCGTCTCG+TGG | + | chr8.4:12047140-12047159 | None:intergenic | 45.0% |
| ! | ACATCCCAATACTAGTCTCC+GGG | + | chr8.4:12048537-12048556 | None:intergenic | 45.0% |
| ! | AGAATTGGTTGCGGTATTGG+TGG | + | chr8.4:12047265-12047284 | None:intergenic | 45.0% |
| ! | GACATCCCAATACTAGTCTC+CGG | + | chr8.4:12048538-12048557 | None:intergenic | 45.0% |
| !!! | TACCGTTGCTTTTGAGGATC+AGG | - | chr8.4:12049189-12049208 | MS.gene78478:CDS | 45.0% |
| AAATCCGTTGACGACGAGTC+TGG | - | chr8.4:12048105-12048124 | MS.gene78478:CDS | 50.0% | |
| AATCCGTTGACGACGAGTCT+GGG | - | chr8.4:12048106-12048125 | MS.gene78478:CDS | 50.0% | |
| ACCCTATGATCTTGAGTCCC+TGG | + | chr8.4:12047952-12047971 | None:intergenic | 50.0% | |
| ACCTTTGTGACCTTCCTCGT+TGG | + | chr8.4:12049116-12049135 | None:intergenic | 50.0% | |
| ATGCACGGAGAAGATATCGC+TGG | - | chr8.4:12047334-12047353 | MS.gene78478:intron | 50.0% | |
| CACCACGAGACGAAAACCTT+TGG | - | chr8.4:12047135-12047154 | MS.gene78478:CDS | 50.0% | |
| GGCCTGATCCTCAAAAGCAA+CGG | + | chr8.4:12049194-12049213 | None:intergenic | 50.0% | |
| GGTTTCCCGGAGACTAGTAT+TGG | - | chr8.4:12048529-12048548 | MS.gene78478:CDS | 50.0% | |
| TCCAACGAGGAAGGTCACAA+AGG | - | chr8.4:12049112-12049131 | MS.gene78478:CDS | 50.0% | |
| TGAAGGATTACGAGTGTCCG+TGG | - | chr8.4:12047381-12047400 | MS.gene78478:intron | 50.0% | |
| TGAGTCCCTGGAAATCCCTT+TGG | + | chr8.4:12047940-12047959 | None:intergenic | 50.0% | |
| TGGGAATGGGAAAACTGTGG+AGG | - | chr8.4:12047588-12047607 | MS.gene78478:CDS | 50.0% | |
| TGGTGGGAATGGGAAAACTG+TGG | - | chr8.4:12047585-12047604 | MS.gene78478:CDS | 50.0% | |
| TTTCCCAGACTCGTCGTCAA+CGG | + | chr8.4:12048112-12048131 | None:intergenic | 50.0% | |
| ! | GGTTTTCGTCTCGTGGTGAA+TGG | + | chr8.4:12047133-12047152 | None:intergenic | 50.0% |
| CAAAGAGGCTCCAACGAGGA+AGG | - | chr8.4:12049103-12049122 | MS.gene78478:CDS | 55.0% | |
| CATGCAAAGAGGCTCCAACG+AGG | - | chr8.4:12049099-12049118 | MS.gene78478:CDS | 55.0% | |
| CGTGGAAATTCTGCTGGTGG+TGG | - | chr8.4:12047826-12047845 | MS.gene78478:intron | 55.0% | |
| GAGTGTGAATCCGGGGAAAG+AGG | - | chr8.4:12047855-12047874 | MS.gene78478:intron | 55.0% | |
| GGTCGTGGAAATTCTGCTGG+TGG | - | chr8.4:12047823-12047842 | MS.gene78478:intron | 55.0% | |
| TTCTCCGTGCATTTCGTCGG+CGG | + | chr8.4:12047326-12047345 | None:intergenic | 55.0% | |
| ! | GCTGGAGCTGTTGATGAGAC+TGG | - | chr8.4:12047352-12047371 | MS.gene78478:intron | 55.0% |
| ATCCCCGCCGACGAAATGCA+CGG | - | chr8.4:12047319-12047338 | MS.gene78478:intron | 60.0% | |
| GTCTCGTGGTGAATGGCGCA+TGG | + | chr8.4:12047126-12047145 | None:intergenic | 60.0% | |
| TCTCCGTGCATTTCGTCGGC+GGG | + | chr8.4:12047325-12047344 | None:intergenic | 60.0% | |
| CTCCGTGCATTTCGTCGGCG+GGG | + | chr8.4:12047324-12047343 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 12047097 | 12049646 | 12047097 | ID=MS.gene78478 |
| chr8.4 | mRNA | 12047097 | 12049646 | 12047097 | ID=MS.gene78478.t1;Parent=MS.gene78478 |
| chr8.4 | exon | 12048521 | 12049646 | 12048521 | ID=MS.gene78478.t1.exon1;Parent=MS.gene78478.t1 |
| chr8.4 | CDS | 12048521 | 12049646 | 12048521 | ID=cds.MS.gene78478.t1;Parent=MS.gene78478.t1 |
| chr8.4 | exon | 12048002 | 12048216 | 12048002 | ID=MS.gene78478.t1.exon2;Parent=MS.gene78478.t1 |
| chr8.4 | CDS | 12048002 | 12048216 | 12048002 | ID=cds.MS.gene78478.t1;Parent=MS.gene78478.t1 |
| chr8.4 | exon | 12047440 | 12047652 | 12047440 | ID=MS.gene78478.t1.exon3;Parent=MS.gene78478.t1 |
| chr8.4 | CDS | 12047440 | 12047652 | 12047440 | ID=cds.MS.gene78478.t1;Parent=MS.gene78478.t1 |
| chr8.4 | exon | 12047097 | 12047240 | 12047097 | ID=MS.gene78478.t1.exon4;Parent=MS.gene78478.t1 |
| chr8.4 | CDS | 12047097 | 12047240 | 12047097 | ID=cds.MS.gene78478.t1;Parent=MS.gene78478.t1 |
| Gene Sequence |
| Protein sequence |
