AlfalfaGEDB | MS.gene88649

M. sativa cultivar XinJiangDaYe / MS.gene88649

KEGG: -
GO: GO:0000166 GO:0003674 GO:0003824 GO:0004672 GO:0005488 GO:0005524 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008144 GO:0008150 GO:0008152 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017076 GO:0019538 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0035639 GO:0036094 GO:0036211 GO:0043167 GO:0043168 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0071704 GO:0097159 GO:0097367 GO:0140096 GO:1901265 GO:1901363 GO:1901564
PFAM: PF00069.28

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene88649.t1	KEH42901.1	100	141	0	0	1	141	1	141	2.00E-75	291.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene88649.t1	O23304	44.4	142	78	1	1	141	1	142	2.8e-33	142.9

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene88649.t1	A0A072VMS5	100.0	141	0	0	1	141	1	141	1.4e-75	291.6

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049142	MS.gene88649	0.839165	1.87E-57	-1.69E-46
MS.gene049254	MS.gene88649	0.801726	7.86E-49	-1.69E-46
MS.gene049264	MS.gene88649	0.853861	1.81E-61	-1.69E-46
MS.gene049283	MS.gene88649	0.821885	3.18E-53	-1.69E-46
MS.gene049368	MS.gene88649	0.803324	3.68E-49	-1.69E-46
MS.gene049499	MS.gene88649	0.806929	6.48E-50	-1.69E-46
MS.gene049585	MS.gene88649	0.819049	1.42E-52	-1.69E-46
MS.gene049801	MS.gene88649	0.813128	2.99E-51	-1.69E-46
MS.gene049983	MS.gene88649	0.838679	2.49E-57	-1.69E-46
MS.gene050084	MS.gene88649	0.805722	1.16E-49	-1.69E-46
MS.gene050085	MS.gene88649	0.81178	5.90E-51	-1.69E-46
MS.gene050359	MS.gene88649	0.838709	2.45E-57	-1.69E-46
MS.gene050361	MS.gene88649	0.845488	3.94E-59	-1.69E-46
MS.gene050414	MS.gene88649	0.817271	3.60E-52	-1.69E-46
MS.gene050551	MS.gene88649	0.814257	1.69E-51	-1.69E-46
MS.gene050556	MS.gene88649	0.831474	1.64E-55	-1.69E-46
MS.gene050646	MS.gene88649	0.858917	5.93E-63	-1.69E-46
MS.gene050654	MS.gene88649	0.840999	6.20E-58	-1.69E-46
MS.gene051102	MS.gene88649	0.812654	3.80E-51	-1.69E-46
MS.gene051209	MS.gene88649	0.823419	1.40E-53	-1.69E-46
MS.gene051332	MS.gene88649	0.816293	5.96E-52	-1.69E-46
MS.gene051343	MS.gene88649	0.820317	7.31E-53	-1.69E-46
MS.gene051800	MS.gene88649	0.833712	4.56E-56	-1.69E-46
MS.gene051831	MS.gene88649	0.811211	7.84E-51	-1.69E-46
MS.gene051856	MS.gene88649	0.800394	1.47E-48	-1.69E-46
MS.gene052037	MS.gene88649	0.80019	1.62E-48	-1.69E-46
MS.gene05216	MS.gene88649	0.822478	2.32E-53	-1.69E-46
MS.gene052239	MS.gene88649	-0.819072	1.41E-52	-1.69E-46
MS.gene052242	MS.gene88649	-0.861028	1.37E-63	-1.69E-46
MS.gene052307	MS.gene88649	0.863259	2.83E-64	-1.69E-46
MS.gene052463	MS.gene88649	0.833297	5.78E-56	-1.69E-46
MS.gene052609	MS.gene88649	0.874568	6.10E-68	-1.69E-46
MS.gene052674	MS.gene88649	0.819236	1.29E-52	-1.69E-46
MS.gene052675	MS.gene88649	0.819605	1.06E-52	-1.69E-46
MS.gene052677	MS.gene88649	0.823138	1.63E-53	-1.69E-46
MS.gene052775	MS.gene88649	0.819363	1.21E-52	-1.69E-46
MS.gene052776	MS.gene88649	0.854727	1.01E-61	-1.69E-46
MS.gene052932	MS.gene88649	0.858448	8.18E-63	-1.69E-46
MS.gene052994	MS.gene88649	0.834402	3.06E-56	-1.69E-46
MS.gene053079	MS.gene88649	0.829923	3.92E-55	-1.69E-46
MS.gene053143	MS.gene88649	0.811097	8.30E-51	-1.69E-46
MS.gene053486	MS.gene88649	0.842563	2.40E-58	-1.69E-46
MS.gene05350	MS.gene88649	0.807252	5.53E-50	-1.69E-46
MS.gene053620	MS.gene88649	0.833684	4.63E-56	-1.69E-46
MS.gene053726	MS.gene88649	0.815191	1.05E-51	-1.69E-46
MS.gene054479	MS.gene88649	0.85614	3.94E-62	-1.69E-46
MS.gene054576	MS.gene88649	0.828948	6.77E-55	-1.69E-46
MS.gene054641	MS.gene88649	0.802846	4.62E-49	-1.69E-46
MS.gene054709	MS.gene88649	0.808422	3.12E-50	-1.69E-46
MS.gene054824	MS.gene88649	0.805975	1.03E-49	-1.69E-46
MS.gene054892	MS.gene88649	0.839528	1.50E-57	-1.69E-46
MS.gene054893	MS.gene88649	0.840513	8.31E-58	-1.69E-46
MS.gene055311	MS.gene88649	0.819104	1.38E-52	-1.69E-46
MS.gene055313	MS.gene88649	0.81965	1.04E-52	-1.69E-46
MS.gene055513	MS.gene88649	0.836389	9.63E-57	-1.69E-46
MS.gene055724	MS.gene88649	0.829447	5.12E-55	-1.69E-46
MS.gene055864	MS.gene88649	0.849331	3.46E-60	-1.69E-46
MS.gene055926	MS.gene88649	0.805437	1.34E-49	-1.69E-46
MS.gene056045	MS.gene88649	0.866582	2.57E-65	-1.69E-46
MS.gene056097	MS.gene88649	0.833804	4.32E-56	-1.69E-46
MS.gene05615	MS.gene88649	0.823386	1.42E-53	-1.69E-46
MS.gene056181	MS.gene88649	0.82632	2.89E-54	-1.69E-46
MS.gene056308	MS.gene88649	0.820987	5.13E-53	-1.69E-46
MS.gene056480	MS.gene88649	0.832214	1.07E-55	-1.69E-46
MS.gene056507	MS.gene88649	0.829602	4.70E-55	-1.69E-46
MS.gene056519	MS.gene88649	0.805167	1.52E-49	-1.69E-46
MS.gene056699	MS.gene88649	0.831798	1.36E-55	-1.69E-46
MS.gene056779	MS.gene88649	0.801911	7.20E-49	-1.69E-46
MS.gene05686	MS.gene88649	0.80248	5.50E-49	-1.69E-46
MS.gene056973	MS.gene88649	0.818932	1.51E-52	-1.69E-46
MS.gene057034	MS.gene88649	0.829112	6.18E-55	-1.69E-46
MS.gene057371	MS.gene88649	0.823782	1.15E-53	-1.69E-46
MS.gene057600	MS.gene88649	0.800551	1.37E-48	-1.69E-46
MS.gene057869	MS.gene88649	0.82355	1.30E-53	-1.69E-46
MS.gene057919	MS.gene88649	0.827027	1.96E-54	-1.69E-46
MS.gene058010	MS.gene88649	0.835286	1.83E-56	-1.69E-46
MS.gene058081	MS.gene88649	0.834256	3.33E-56	-1.69E-46
MS.gene058223	MS.gene88649	-0.803938	2.74E-49	-1.69E-46
MS.gene058289	MS.gene88649	0.874429	6.80E-68	-1.69E-46
MS.gene058292	MS.gene88649	0.826561	2.54E-54	-1.69E-46
MS.gene058429	MS.gene88649	0.827408	1.59E-54	-1.69E-46
MS.gene058638	MS.gene88649	0.848669	5.29E-60	-1.69E-46
MS.gene058639	MS.gene88649	0.847824	9.05E-60	-1.69E-46
MS.gene058647	MS.gene88649	0.845524	3.85E-59	-1.69E-46
MS.gene058758	MS.gene88649	0.81198	5.34E-51	-1.69E-46
MS.gene058919	MS.gene88649	0.821034	5.00E-53	-1.69E-46
MS.gene059007	MS.gene88649	0.83925	1.77E-57	-1.69E-46
MS.gene059170	MS.gene88649	0.807606	4.66E-50	-1.69E-46
MS.gene059439	MS.gene88649	0.860668	1.76E-63	-1.69E-46
MS.gene059713	MS.gene88649	0.802177	6.35E-49	-1.69E-46
MS.gene059965	MS.gene88649	0.841899	3.59E-58	-1.69E-46
MS.gene060296	MS.gene88649	0.811634	6.35E-51	-1.69E-46
MS.gene060373	MS.gene88649	0.813783	2.15E-51	-1.69E-46
MS.gene060380	MS.gene88649	0.827291	1.70E-54	-1.69E-46
MS.gene060400	MS.gene88649	0.845425	4.09E-59	-1.69E-46
MS.gene060520	MS.gene88649	0.807258	5.52E-50	-1.69E-46
MS.gene06052	MS.gene88649	0.826304	2.92E-54	-1.69E-46
MS.gene060777	MS.gene88649	0.835098	2.04E-56	-1.69E-46
MS.gene060785	MS.gene88649	0.804084	2.56E-49	-1.69E-46
MS.gene060840	MS.gene88649	0.804285	2.33E-49	-1.69E-46
MS.gene060850	MS.gene88649	0.812025	5.22E-51	-1.69E-46
MS.gene060851	MS.gene88649	0.82019	7.82E-53	-1.69E-46
MS.gene060852	MS.gene88649	0.815518	8.87E-52	-1.69E-46
MS.gene060932	MS.gene88649	0.850369	1.78E-60	-1.69E-46
MS.gene060933	MS.gene88649	0.860518	1.95E-63	-1.69E-46
MS.gene060935	MS.gene88649	0.809549	1.79E-50	-1.69E-46
MS.gene060937	MS.gene88649	0.833835	4.25E-56	-1.69E-46
MS.gene060998	MS.gene88649	0.815342	9.71E-52	-1.69E-46
MS.gene061006	MS.gene88649	0.804901	1.73E-49	-1.69E-46
MS.gene06121	MS.gene88649	0.834941	2.24E-56	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene88649.t1	MTR_1g077800	99.296	142	1	0	1	142	1	142	1.06e-100	302
MS.gene88649.t1	MTR_1g077800	99.296	142	1	0	1	142	1	142	1.17e-100	303
MS.gene88649.t1	MTR_6g006770	58.394	137	57	0	6	142	7	143	9.92e-56	184
MS.gene88649.t1	MTR_4g005730	56.296	135	59	0	8	142	17	151	3.42e-51	172
MS.gene88649.t1	MTR_4g005730	56.296	135	59	0	8	142	17	151	3.51e-51	172
MS.gene88649.t1	MTR_4g005730	56.296	135	59	0	8	142	17	151	4.27e-51	172
MS.gene88649.t1	MTR_2g100030	47.794	136	70	1	8	142	11	146	1.35e-43	150
MS.gene88649.t1	MTR_2g078740	40.625	128	74	1	15	142	15	140	1.26e-24	98.6
MS.gene88649.t1	MTR_2g078740	40.625	128	74	1	15	142	15	140	1.27e-24	98.6
MS.gene88649.t1	MTR_2g078740	40.625	128	74	1	15	142	15	140	1.36e-24	98.6
MS.gene88649.t1	MTR_5g045190	34.375	128	83	1	15	142	239	365	1.71e-19	84.0
MS.gene88649.t1	MTR_4g074875	30.233	129	89	1	15	142	20	148	1.01e-14	70.5
MS.gene88649.t1	MTR_4g074875	30.233	129	89	1	15	142	20	148	1.02e-14	70.5
MS.gene88649.t1	MTR_4g075410	30.233	129	89	1	15	142	20	148	1.90e-14	69.7
MS.gene88649.t1	MTR_4g075410	30.233	129	89	1	15	142	20	148	1.97e-14	69.3
MS.gene88649.t1	MTR_4g029020	30.657	137	90	2	6	140	3	136	5.25e-12	62.4
MS.gene88649.t1	MTR_5g075100	30.469	128	85	2	15	140	23	148	7.05e-12	62.0
MS.gene88649.t1	MTR_7g072575	29.231	130	87	2	13	140	10	136	1.00e-11	61.6
MS.gene88649.t1	MTR_2g020380	28.125	128	86	2	15	142	4	125	1.18e-11	61.6
MS.gene88649.t1	MTR_5g075060	26.923	130	90	2	13	140	10	136	2.02e-11	60.8
MS.gene88649.t1	MTR_7g097150	28.462	130	89	2	13	140	118	245	5.27e-11	59.7
MS.gene88649.t1	MTR_5g023150	28.767	146	88	5	4	142	187	323	7.57e-11	58.9
MS.gene88649.t1	MTR_5g023150	28.767	146	88	5	4	142	284	420	8.96e-11	58.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene88649.t1	AT4G10730	78.519	135	29	0	8	142	20	154	7.06e-76	238
MS.gene88649.t1	AT4G10730	78.519	135	29	0	8	142	40	174	7.89e-76	239
MS.gene88649.t1	AT4G24100	75.182	137	34	0	6	142	24	160	2.11e-73	232
MS.gene88649.t1	AT4G24100	75.182	137	34	0	6	142	40	176	2.74e-73	232
MS.gene88649.t1	AT4G24100	75.182	137	34	0	6	142	24	160	3.14e-73	232
MS.gene88649.t1	AT4G24100	75.182	137	34	0	6	142	40	176	3.56e-73	232
MS.gene88649.t1	AT5G14720	59.441	143	57	1	1	142	1	143	6.01e-57	188
MS.gene88649.t1	AT5G14720	59.441	143	57	1	1	142	1	143	6.01e-57	188
MS.gene88649.t1	AT1G79640	58.394	137	57	0	6	142	4	140	9.10e-54	179
MS.gene88649.t1	AT1G79640	58.394	137	57	0	6	142	7	143	1.16e-53	179
MS.gene88649.t1	AT1G79640	58.394	137	57	0	6	142	4	140	1.19e-53	179
MS.gene88649.t1	AT1G79640	58.394	137	57	0	6	142	4	140	1.19e-53	179
MS.gene88649.t1	AT1G79640	58.394	137	57	0	6	142	4	140	1.19e-53	179
MS.gene88649.t1	AT1G79640	58.394	137	57	0	6	142	4	140	1.25e-53	179
MS.gene88649.t1	AT1G70430	55.319	141	63	0	2	142	3	143	3.72e-52	174
MS.gene88649.t1	AT1G70430	55.319	141	63	0	2	142	3	143	4.23e-52	174
MS.gene88649.t1	AT1G70430	55.319	141	63	0	2	142	3	143	4.72e-52	174
MS.gene88649.t1	AT4G14480	44.056	143	79	1	1	142	1	143	5.50e-42	145
MS.gene88649.t1	AT1G23700	49.231	130	62	1	13	142	14	139	1.71e-39	137
MS.gene88649.t1	AT1G23700	49.231	130	62	1	13	142	14	139	5.93e-39	137
MS.gene88649.t1	AT1G23700	49.231	130	62	1	13	142	14	139	7.55e-39	136
MS.gene88649.t1	AT1G70430	60.256	78	31	0	65	142	1	78	1.45e-30	115
MS.gene88649.t1	AT3G15220	37.500	128	78	1	15	142	15	140	3.44e-19	83.2
MS.gene88649.t1	AT1G69220	35.156	128	82	1	15	142	249	375	1.28e-18	81.6
MS.gene88649.t1	AT1G53165	35.938	128	80	1	15	142	15	140	1.82e-18	80.9
MS.gene88649.t1	AT1G53165	35.938	128	80	1	15	142	15	140	1.84e-18	80.9
MS.gene88649.t1	AT1G53165	35.938	128	80	1	15	142	15	140	1.85e-18	80.9
MS.gene88649.t1	AT1G69220	32.558	129	86	1	14	142	221	348	2.12e-15	72.4
MS.gene88649.t1	AT3G13530	30.233	129	89	1	15	142	20	148	3.13e-14	68.9
MS.gene88649.t1	AT3G07980	30.233	129	89	1	15	142	20	148	4.70e-14	68.6
MS.gene88649.t1	AT3G07980	30.233	129	89	1	15	142	20	148	5.07e-14	68.6
MS.gene88649.t1	AT3G21220	28.800	125	83	2	18	142	73	191	6.76e-12	62.0
MS.gene88649.t1	AT3G21220	28.800	125	83	2	18	142	73	191	6.76e-12	62.0
MS.gene88649.t1	AT1G50240	30.233	129	86	3	13	140	4	129	1.85e-11	60.8
MS.gene88649.t1	AT1G50240	30.233	129	86	3	13	140	4	129	1.85e-11	60.8
MS.gene88649.t1	AT5G66210	29.197	137	93	3	8	140	54	190	3.76e-11	60.1
MS.gene88649.t1	AT5G66210	29.197	137	93	3	8	140	54	190	3.76e-11	60.1
MS.gene88649.t1	AT5G66210	29.197	137	93	3	8	140	54	190	4.70e-11	59.7
MS.gene88649.t1	AT5G66210	29.197	137	93	3	8	140	54	190	4.75e-11	59.7
MS.gene88649.t1	AT5G66210	29.197	137	93	3	8	140	54	190	4.75e-11	59.7
MS.gene88649.t1	AT5G66210	29.197	137	93	3	8	140	54	190	5.16e-11	59.7
MS.gene88649.t1	AT4G35780	29.452	146	87	5	4	142	281	417	5.52e-11	59.7
MS.gene88649.t1	AT3G12690	32.857	140	86	4	9	141	175	313	6.03e-11	59.3
MS.gene88649.t1	AT3G12690	32.857	140	86	4	9	141	175	313	6.03e-11	59.3
MS.gene88649.t1	AT3G12690	32.857	140	86	4	9	141	175	313	6.03e-11	59.3
MS.gene88649.t1	AT1G63700	30.508	118	72	3	33	142	414	529	6.82e-11	59.3
MS.gene88649.t1	AT1G63700	30.508	118	72	3	33	142	414	529	6.82e-11	59.3

Find 19 sgRNAs with CRISPR-Local

Find 24 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTTCAACGTCTCTTTCAAAA+TGG	0.265015	1.2:+62855443	None:intergenic
CATGAACCTTGTGCCATAAA+AGG	0.291875	1.2:+62855522	None:intergenic
CGTTGTGGATCGTAAACTTT+GGG	0.347503	1.2:-62855553	MS.gene88649:CDS
ACCGCTACTTCTTCGTTGTA+TGG	0.392284	1.2:+62855687	None:intergenic
GAAAGAGACGTTGAAAGCTT+TGG	0.396603	1.2:-62855436	MS.gene88649:CDS
GGATTTGAAGAAGATGCTAT+TGG	0.418626	1.2:-62855468	MS.gene88649:CDS
ACACATCACTAAATGGGTTC+AGG	0.447322	1.2:-62855804	None:intergenic
TACAAGCTTCTAGAAGAAGT+TGG	0.486254	1.2:-62855750	MS.gene88649:CDS
ATGAAATCAGCTTATCCTGA+TGG	0.487247	1.2:-62855489	MS.gene88649:CDS
TCGTTGTGGATCGTAAACTT+TGG	0.492637	1.2:-62855554	MS.gene88649:CDS
CTTCTAGAAGAAGTTGGTTA+CGG	0.506829	1.2:-62855744	MS.gene88649:CDS
GCATCTTCTTCAAATCCATC+AGG	0.515627	1.2:+62855474	None:intergenic
TCTAGAAGCTTGTAATCTTG+AGG	0.521214	1.2:+62855759	None:intergenic
ATCGTATTGTTCCTTCGTTG+TGG	0.548419	1.2:-62855568	MS.gene88649:CDS
ATTCATCGTGATGTTAAAGC+TGG	0.566678	1.2:-62855390	MS.gene88649:intron
TTGGATTATCTTCATCAACA+TGG	0.602787	1.2:-62855417	MS.gene88649:CDS
TGGTTACGGTGCAAGCGCAA+CGG	0.606517	1.2:-62855730	MS.gene88649:CDS
TCCATACAACGAAGAAGTAG+CGG	0.655481	1.2:-62855688	MS.gene88649:CDS
AAGTTTACGATCCACAACGA+AGG	0.725773	1.2:+62855557	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AATATTTTGCTTGATTCTAA+TGG	-	chr1.2:62855723-62855742	MS.gene88649:CDS	20.0%
	TAATGGTGAAGTCAAACTTT+CGG	-	chr1.2:62855740-62855759	MS.gene88649:CDS	30.0%
	TTGGATTATCTTCATCAACA+TGG	-	chr1.2:62855672-62855691	MS.gene88649:CDS	30.0%
	TTTCAACGTCTCTTTCAAAA+TGG	+	chr1.2:62855649-62855668	None:intergenic	30.0%
	ATGAAATCAGCTTATCCTGA+TGG	-	chr1.2:62855600-62855619	MS.gene88649:CDS	35.0%
	ATTCATCGTGATGTTAAAGC+TGG	-	chr1.2:62855699-62855718	MS.gene88649:CDS	35.0%
	GGATTTGAAGAAGATGCTAT+TGG	-	chr1.2:62855621-62855640	MS.gene88649:CDS	35.0%
	TCTAGAAGCTTGTAATCTTG+AGG	+	chr1.2:62855333-62855352	None:intergenic	35.0%
	TCTGCTTCTATGTTTGATAC+TGG	-	chr1.2:62855774-62855793	MS.gene88649:CDS	35.0%
!	ATTATGCCTTTTATGGCACA+AGG	-	chr1.2:62855561-62855580	MS.gene88649:CDS	35.0%
!	CTTCTAGAAGAAGTTGGTTA+CGG	-	chr1.2:62855345-62855364	MS.gene88649:intron	35.0%
!	GAAGTCAAACTTTCGGATTT+TGG	-	chr1.2:62855747-62855766	MS.gene88649:CDS	35.0%
!	TACAAGCTTCTAGAAGAAGT+TGG	-	chr1.2:62855339-62855358	MS.gene88649:intron	35.0%
!	TTGGGTGATTATGCCTTTTA+TGG	-	chr1.2:62855554-62855573	MS.gene88649:CDS	35.0%
	AAGTTTACGATCCACAACGA+AGG	+	chr1.2:62855535-62855554	None:intergenic	40.0%
	ATCGTATTGTTCCTTCGTTG+TGG	-	chr1.2:62855521-62855540	MS.gene88649:CDS	40.0%
	CATGAACCTTGTGCCATAAA+AGG	+	chr1.2:62855570-62855589	None:intergenic	40.0%
	CGTTGTGGATCGTAAACTTT+GGG	-	chr1.2:62855536-62855555	MS.gene88649:CDS	40.0%
	GAAAGAGACGTTGAAAGCTT+TGG	-	chr1.2:62855653-62855672	MS.gene88649:CDS	40.0%
	GCATCTTCTTCAAATCCATC+AGG	+	chr1.2:62855618-62855637	None:intergenic	40.0%
	TCCATACAACGAAGAAGTAG+CGG	-	chr1.2:62855401-62855420	MS.gene88649:CDS	40.0%
	TCGTTGTGGATCGTAAACTT+TGG	-	chr1.2:62855535-62855554	MS.gene88649:CDS	40.0%
	ACCGCTACTTCTTCGTTGTA+TGG	+	chr1.2:62855405-62855424	None:intergenic	45.0%
	TGGTTACGGTGCAAGCGCAA+CGG	-	chr1.2:62855359-62855378	MS.gene88649:intron	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.2	gene	62855297	62855814	62855297	ID=MS.gene88649
chr1.2	mRNA	62855297	62855814	62855297	ID=MS.gene88649.t1;Parent=MS.gene88649
chr1.2	exon	62855391	62855814	62855391	ID=MS.gene88649.t1.exon1;Parent=MS.gene88649.t1
chr1.2	CDS	62855391	62855814	62855391	ID=cds.MS.gene88649.t1;Parent=MS.gene88649.t1
chr1.2	exon	62855297	62855304	62855297	ID=MS.gene88649.t1.exon2;Parent=MS.gene88649.t1
chr1.2	CDS	62855297	62855304	62855297	ID=cds.MS.gene88649.t1;Parent=MS.gene88649.t1

Gene Sequence

>MS.gene88649

ATGGGTTCAGGAAGCAGAAGCTACTCAGCGAATCCTCAAGATTACAAGCTTCTAGAAGAAGTTGGTTACGGTGCAAGCGCAACGGTTTATCATGCAGTTTATCTTCCATACAACGAAGAAGTAGCGGTGAAATCTCTCGATCTAGATCGATGCAATTCAAATTTCGATGATATTCGTAAAGAAGCACAGATCATGAGCTTAATTGATCATCGAAACGTTGTGAAATCGTATTGTTCCTTCGTTGTGGATCGTAAACTTTGGGTGATTATGCCTTTTATGGCACAAGGTTCATGTTTGCATTTGATGAAATCAGCTTATCCTGATGGATTTGAAGAAGATGCTATTGGATCCATTTTGAAAGAGACGTTGAAAGCTTTGGATTATCTTCATCAACATGGACACATTCATCGTGATGTTAAAGCTGGTAATATTTTGCTTGATTCTAATGGTGAAGTCAAACTTTCGGATTTTGGTGTTTCTGCTTCTATGTTTGATACTGGTGATCGTCAGCGTTCTAG

Protein sequence

>MS.gene88649.t1

MGSGSRSYSANPQDYKLLEEVGYGASATVYHAVYLPYNEEVAVKSLDLDRCNSNFDDIRKEAQIMSLIDHRNVVKSYCSFVVDRKLWVIMPFMAQGSCLHLMKSAYPDGFEEDAIGSILKETLKALDYLHQHGHIHRDVKAAF