Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88870.t1 | XP_013469599.1 | 94.9 | 511 | 25 | 1 | 1 | 510 | 1 | 511 | 2.40E-264 | 921 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88870.t1 | P46228 | 36.7 | 210 | 121 | 5 | 271 | 475 | 94 | 296 | 3.8e-24 | 114.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88870.t1 | A0A072VPA0 | 94.9 | 511 | 25 | 1 | 1 | 510 | 1 | 511 | 1.7e-264 | 921.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene88870 | 0.819579 | 1.08E-52 | -1.69E-46 |
| MS.gene049153 | MS.gene88870 | 0.824788 | 6.68E-54 | -1.69E-46 |
| MS.gene049351 | MS.gene88870 | 0.819875 | 9.23E-53 | -1.69E-46 |
| MS.gene049356 | MS.gene88870 | 0.813435 | 2.56E-51 | -1.69E-46 |
| MS.gene049491 | MS.gene88870 | 0.803828 | 2.89E-49 | -1.69E-46 |
| MS.gene049661 | MS.gene88870 | 0.825146 | 5.50E-54 | -1.69E-46 |
| MS.gene049662 | MS.gene88870 | 0.816332 | 5.84E-52 | -1.69E-46 |
| MS.gene049758 | MS.gene88870 | 0.86498 | 8.22E-65 | -1.69E-46 |
| MS.gene049910 | MS.gene88870 | 0.800153 | 1.65E-48 | -1.69E-46 |
| MS.gene050076 | MS.gene88870 | 0.801352 | 9.38E-49 | -1.69E-46 |
| MS.gene050128 | MS.gene88870 | 0.833237 | 5.99E-56 | -1.69E-46 |
| MS.gene050301 | MS.gene88870 | 0.871829 | 5.07E-67 | -1.69E-46 |
| MS.gene050397 | MS.gene88870 | 0.813091 | 3.05E-51 | -1.69E-46 |
| MS.gene050406 | MS.gene88870 | 0.827865 | 1.24E-54 | -1.69E-46 |
| MS.gene050426 | MS.gene88870 | -0.805075 | 1.59E-49 | -1.69E-46 |
| MS.gene050432 | MS.gene88870 | 0.807105 | 5.95E-50 | -1.69E-46 |
| MS.gene050464 | MS.gene88870 | 0.859898 | 3.01E-63 | -1.69E-46 |
| MS.gene050529 | MS.gene88870 | 0.863712 | 2.05E-64 | -1.69E-46 |
| MS.gene050642 | MS.gene88870 | 0.810507 | 1.11E-50 | -1.69E-46 |
| MS.gene050670 | MS.gene88870 | 0.840946 | 6.40E-58 | -1.69E-46 |
| MS.gene050812 | MS.gene88870 | 0.808897 | 2.47E-50 | -1.69E-46 |
| MS.gene05101 | MS.gene88870 | 0.827176 | 1.81E-54 | -1.69E-46 |
| MS.gene05105 | MS.gene88870 | 0.810505 | 1.12E-50 | -1.69E-46 |
| MS.gene051471 | MS.gene88870 | 0.856475 | 3.14E-62 | -1.69E-46 |
| MS.gene051662 | MS.gene88870 | 0.800581 | 1.35E-48 | -1.69E-46 |
| MS.gene051663 | MS.gene88870 | 0.809781 | 1.60E-50 | -1.69E-46 |
| MS.gene051860 | MS.gene88870 | 0.837648 | 4.59E-57 | -1.69E-46 |
| MS.gene051983 | MS.gene88870 | 0.804708 | 1.90E-49 | -1.69E-46 |
| MS.gene052077 | MS.gene88870 | 0.846185 | 2.55E-59 | -1.69E-46 |
| MS.gene052078 | MS.gene88870 | 0.87305 | 1.99E-67 | -1.69E-46 |
| MS.gene052178 | MS.gene88870 | 0.845458 | 4.01E-59 | -1.69E-46 |
| MS.gene052188 | MS.gene88870 | 0.882221 | 1.25E-70 | -1.69E-46 |
| MS.gene052253 | MS.gene88870 | 0.840099 | 1.07E-57 | -1.69E-46 |
| MS.gene052310 | MS.gene88870 | 0.866218 | 3.35E-65 | -1.69E-46 |
| MS.gene052322 | MS.gene88870 | 0.80559 | 1.24E-49 | -1.69E-46 |
| MS.gene052326 | MS.gene88870 | 0.802027 | 6.82E-49 | -1.69E-46 |
| MS.gene052340 | MS.gene88870 | 0.880331 | 5.99E-70 | -1.69E-46 |
| MS.gene052481 | MS.gene88870 | 0.800392 | 1.47E-48 | -1.69E-46 |
| MS.gene052485 | MS.gene88870 | 0.826665 | 2.40E-54 | -1.69E-46 |
| MS.gene052917 | MS.gene88870 | -0.803788 | 2.95E-49 | -1.69E-46 |
| MS.gene053073 | MS.gene88870 | 0.802257 | 6.11E-49 | -1.69E-46 |
| MS.gene053103 | MS.gene88870 | 0.822281 | 2.58E-53 | -1.69E-46 |
| MS.gene053209 | MS.gene88870 | 0.822219 | 2.66E-53 | -1.69E-46 |
| MS.gene053557 | MS.gene88870 | 0.851262 | 9.95E-61 | -1.69E-46 |
| MS.gene053836 | MS.gene88870 | 0.861615 | 9.06E-64 | -1.69E-46 |
| MS.gene053928 | MS.gene88870 | 0.826497 | 2.63E-54 | -1.69E-46 |
| MS.gene054123 | MS.gene88870 | 0.855744 | 5.14E-62 | -1.69E-46 |
| MS.gene054349 | MS.gene88870 | 0.827694 | 1.36E-54 | -1.69E-46 |
| MS.gene054473 | MS.gene88870 | 0.808042 | 3.76E-50 | -1.69E-46 |
| MS.gene054930 | MS.gene88870 | 0.809516 | 1.82E-50 | -1.69E-46 |
| MS.gene054955 | MS.gene88870 | 0.844069 | 9.50E-59 | -1.69E-46 |
| MS.gene054983 | MS.gene88870 | 0.816318 | 5.88E-52 | -1.69E-46 |
| MS.gene055116 | MS.gene88870 | 0.849395 | 3.32E-60 | -1.69E-46 |
| MS.gene055277 | MS.gene88870 | 0.836533 | 8.85E-57 | -1.69E-46 |
| MS.gene055390 | MS.gene88870 | 0.818526 | 1.87E-52 | -1.69E-46 |
| MS.gene055422 | MS.gene88870 | 0.877682 | 5.16E-69 | -1.69E-46 |
| MS.gene055428 | MS.gene88870 | 0.857572 | 1.49E-62 | -1.69E-46 |
| MS.gene055533 | MS.gene88870 | 0.800531 | 1.38E-48 | -1.69E-46 |
| MS.gene05553 | MS.gene88870 | 0.802489 | 5.48E-49 | -1.69E-46 |
| MS.gene055712 | MS.gene88870 | 0.820478 | 6.72E-53 | -1.69E-46 |
| MS.gene056191 | MS.gene88870 | 0.804204 | 2.42E-49 | -1.69E-46 |
| MS.gene056407 | MS.gene88870 | 0.827976 | 1.16E-54 | -1.69E-46 |
| MS.gene056497 | MS.gene88870 | 0.803351 | 3.63E-49 | -1.69E-46 |
| MS.gene056609 | MS.gene88870 | 0.832649 | 8.38E-56 | -1.69E-46 |
| MS.gene056612 | MS.gene88870 | 0.837697 | 4.46E-57 | -1.69E-46 |
| MS.gene056659 | MS.gene88870 | 0.809053 | 2.29E-50 | -1.69E-46 |
| MS.gene056719 | MS.gene88870 | 0.826516 | 2.60E-54 | -1.69E-46 |
| MS.gene056796 | MS.gene88870 | 0.810815 | 9.56E-51 | -1.69E-46 |
| MS.gene056899 | MS.gene88870 | -0.824473 | 7.92E-54 | -1.69E-46 |
| MS.gene05702 | MS.gene88870 | 0.840402 | 8.88E-58 | -1.69E-46 |
| MS.gene057121 | MS.gene88870 | 0.808001 | 3.84E-50 | -1.69E-46 |
| MS.gene057123 | MS.gene88870 | 0.809295 | 2.03E-50 | -1.69E-46 |
| MS.gene057245 | MS.gene88870 | 0.807574 | 4.73E-50 | -1.69E-46 |
| MS.gene057295 | MS.gene88870 | 0.82868 | 7.86E-55 | -1.69E-46 |
| MS.gene05733 | MS.gene88870 | 0.804978 | 1.67E-49 | -1.69E-46 |
| MS.gene057396 | MS.gene88870 | 0.804788 | 1.83E-49 | -1.69E-46 |
| MS.gene057439 | MS.gene88870 | 0.836086 | 1.15E-56 | -1.69E-46 |
| MS.gene057448 | MS.gene88870 | 0.847689 | 9.86E-60 | -1.69E-46 |
| MS.gene057449 | MS.gene88870 | 0.823807 | 1.14E-53 | -1.69E-46 |
| MS.gene057450 | MS.gene88870 | 0.851985 | 6.21E-61 | -1.69E-46 |
| MS.gene057749 | MS.gene88870 | 0.834499 | 2.89E-56 | -1.69E-46 |
| MS.gene057823 | MS.gene88870 | 0.837549 | 4.87E-57 | -1.69E-46 |
| MS.gene058002 | MS.gene88870 | 0.872761 | 2.48E-67 | -1.69E-46 |
| MS.gene058082 | MS.gene88870 | 0.845653 | 3.55E-59 | -1.69E-46 |
| MS.gene05811 | MS.gene88870 | 0.864243 | 1.40E-64 | -1.69E-46 |
| MS.gene058142 | MS.gene88870 | 0.840369 | 9.06E-58 | -1.69E-46 |
| MS.gene058276 | MS.gene88870 | 0.815713 | 8.03E-52 | -1.69E-46 |
| MS.gene058293 | MS.gene88870 | 0.856869 | 2.40E-62 | -1.69E-46 |
| MS.gene058365 | MS.gene88870 | 0.821526 | 3.85E-53 | -1.69E-46 |
| MS.gene058660 | MS.gene88870 | 0.852859 | 3.50E-61 | -1.69E-46 |
| MS.gene058710 | MS.gene88870 | 0.808423 | 3.12E-50 | -1.69E-46 |
| MS.gene058749 | MS.gene88870 | 0.811485 | 6.84E-51 | -1.69E-46 |
| MS.gene058787 | MS.gene88870 | 0.832948 | 7.06E-56 | -1.69E-46 |
| MS.gene058845 | MS.gene88870 | 0.831348 | 1.76E-55 | -1.69E-46 |
| MS.gene05886 | MS.gene88870 | 0.80009 | 1.70E-48 | -1.69E-46 |
| MS.gene058928 | MS.gene88870 | 0.846432 | 2.18E-59 | -1.69E-46 |
| MS.gene05907 | MS.gene88870 | 0.86215 | 6.21E-64 | -1.69E-46 |
| MS.gene059285 | MS.gene88870 | 0.865987 | 3.96E-65 | -1.69E-46 |
| MS.gene059294 | MS.gene88870 | 0.817247 | 3.64E-52 | -1.69E-46 |
| MS.gene059342 | MS.gene88870 | 0.811761 | 5.95E-51 | -1.69E-46 |
| MS.gene059366 | MS.gene88870 | 0.810402 | 1.17E-50 | -1.69E-46 |
| MS.gene059420 | MS.gene88870 | 0.811501 | 6.78E-51 | -1.69E-46 |
| MS.gene059518 | MS.gene88870 | 0.83993 | 1.18E-57 | -1.69E-46 |
| MS.gene059597 | MS.gene88870 | 0.884605 | 1.66E-71 | -1.69E-46 |
| MS.gene05959 | MS.gene88870 | 0.824684 | 7.06E-54 | -1.69E-46 |
| MS.gene059676 | MS.gene88870 | 0.850744 | 1.39E-60 | -1.69E-46 |
| MS.gene059688 | MS.gene88870 | 0.859712 | 3.42E-63 | -1.69E-46 |
| MS.gene059692 | MS.gene88870 | 0.869222 | 3.64E-66 | -1.69E-46 |
| MS.gene059695 | MS.gene88870 | 0.864872 | 8.89E-65 | -1.69E-46 |
| MS.gene059708 | MS.gene88870 | 0.823395 | 1.42E-53 | -1.69E-46 |
| MS.gene059807 | MS.gene88870 | 0.803245 | 3.82E-49 | -1.69E-46 |
| MS.gene05984 | MS.gene88870 | 0.884863 | 1.33E-71 | -1.69E-46 |
| MS.gene059894 | MS.gene88870 | 0.863491 | 2.40E-64 | -1.69E-46 |
| MS.gene059899 | MS.gene88870 | 0.836666 | 8.19E-57 | -1.69E-46 |
| MS.gene06037 | MS.gene88870 | 0.843618 | 1.25E-58 | -1.69E-46 |
| MS.gene060403 | MS.gene88870 | 0.810078 | 1.38E-50 | -1.69E-46 |
| MS.gene060407 | MS.gene88870 | 0.850246 | 1.92E-60 | -1.69E-46 |
| MS.gene060495 | MS.gene88870 | 0.811751 | 5.99E-51 | -1.69E-46 |
| MS.gene06090 | MS.gene88870 | 0.829203 | 5.87E-55 | -1.69E-46 |
| MS.gene061041 | MS.gene88870 | 0.805343 | 1.40E-49 | -1.69E-46 |
| MS.gene061049 | MS.gene88870 | 0.88369 | 3.62E-71 | -1.69E-46 |
| MS.gene061051 | MS.gene88870 | -0.816572 | 5.16E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88870.t1 | MTR_1g097610 | 96.477 | 511 | 17 | 1 | 1 | 510 | 1 | 511 | 0.0 | 995 |
| MS.gene88870.t1 | MTR_2g033020 | 30.244 | 205 | 135 | 4 | 274 | 475 | 158 | 357 | 1.58e-22 | 100 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88870.t1 | AT1G71720 | 57.490 | 494 | 168 | 9 | 26 | 509 | 37 | 498 | 0.0 | 532 |
| MS.gene88870.t1 | AT1G71720 | 58.156 | 423 | 139 | 6 | 26 | 441 | 37 | 428 | 2.35e-159 | 460 |
| MS.gene88870.t1 | AT5G30510 | 32.195 | 205 | 130 | 4 | 274 | 475 | 165 | 363 | 1.91e-25 | 108 |
Find 88 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATCATACAGAGAGTATTTA+TGG | 0.166666 | 1.1:-70245225 | MS.gene88870:intron |
| GTTGTTGGTGTTGTTGTTTC+AGG | 0.170222 | 1.1:-70248590 | MS.gene88870:CDS |
| CCTATTGTCTCTACAAAATT+AGG | 0.227064 | 1.1:-70245158 | MS.gene88870:CDS |
| AGGAGTGGAAAGAACAATAT+TGG | 0.289687 | 1.1:+70249015 | None:intergenic |
| GAACAAGCCGTCACCTGTTT+TGG | 0.299137 | 1.1:-70248852 | MS.gene88870:CDS |
| GGATGAAGTTGAAGAATAAA+TGG | 0.339304 | 1.1:+70249115 | None:intergenic |
| GTTTCTACAACAGGCCTTCC+TGG | 0.339830 | 1.1:+70248374 | None:intergenic |
| GCCTTCTGAAGAGGAAGCTT+TGG | 0.354245 | 1.1:-70248807 | MS.gene88870:CDS |
| GACCGTTGATTTCTACTAGA+AGG | 0.354808 | 1.1:-70248304 | MS.gene88870:CDS |
| TCCTTTGAATGGTAAAGAAA+TGG | 0.358874 | 1.1:-70248498 | MS.gene88870:CDS |
| GGAAGGCCTGTTGTAGAAAC+TGG | 0.360206 | 1.1:-70248371 | MS.gene88870:CDS |
| ATCTTAATTTGTGCTCCATA+TGG | 0.366503 | 1.1:+70246791 | None:intergenic |
| GGCTCTTTCGTCGGATTGCT+TGG | 0.369347 | 1.1:-70248283 | MS.gene88870:CDS |
| ACAACAAAATCACCAGGTTT+TGG | 0.371047 | 1.1:+70248608 | None:intergenic |
| TTCTTTGGTGCTTAGTGAAA+AGG | 0.372446 | 1.1:-70247005 | MS.gene88870:CDS |
| TCTTGTCACAAGCTCAGCTT+TGG | 0.373548 | 1.1:+70247223 | None:intergenic |
| ATGAAGCACTTTATGCAAAC+TGG | 0.377438 | 1.1:-70245103 | MS.gene88870:CDS |
| TAAAACCTCAGCAAACAAAA+TGG | 0.381979 | 1.1:+70248346 | None:intergenic |
| AACTTGAATTTCATCATCAA+TGG | 0.393250 | 1.1:+70248883 | None:intergenic |
| TATGGAGCACAAATTAAGAT+TGG | 0.400360 | 1.1:-70246788 | MS.gene88870:CDS |
| AAAGTCCAGGTTCACTTTCA+AGG | 0.415620 | 1.1:+70245341 | None:intergenic |
| TCCATCTCAACTTCCAAAAC+AGG | 0.419736 | 1.1:+70248839 | None:intergenic |
| CACTTTATGCAAACTGGAAG+TGG | 0.420539 | 1.1:-70245097 | MS.gene88870:CDS |
| AAGGAAGTGCTTCCTTTGAA+TGG | 0.425729 | 1.1:-70248509 | MS.gene88870:CDS |
| CGGCAAAGCACTAGTTGGTA+AGG | 0.432883 | 1.1:+70245133 | None:intergenic |
| ATGGTTCCAGTTTCTACAAC+AGG | 0.436694 | 1.1:+70248365 | None:intergenic |
| GGAGTGGAAAGAACAATATT+GGG | 0.445067 | 1.1:+70249016 | None:intergenic |
| AAAAGAAGGAGAAGATAAGA+AGG | 0.446272 | 1.1:-70248651 | MS.gene88870:CDS |
| AGATAATGAGGTATTAGAAC+TGG | 0.450849 | 1.1:-70248729 | MS.gene88870:CDS |
| TCTTTGGTGCTTAGTGAAAA+GGG | 0.453525 | 1.1:-70247004 | MS.gene88870:CDS |
| TGCTTGGCATCGAGTGAGGC+AGG | 0.461627 | 1.1:-70248267 | MS.gene88870:intron |
| AGAATTACAGAGTGGAATAC+TGG | 0.466743 | 1.1:-70247369 | MS.gene88870:CDS |
| GCTTAGTGAAAAGGGAGCTT+GGG | 0.468410 | 1.1:-70246996 | MS.gene88870:intron |
| CTCCGTTGATGAGAAGGTTA+AGG | 0.469591 | 1.1:-70245718 | MS.gene88870:CDS |
| TGCTTAGTGAAAAGGGAGCT+TGG | 0.478307 | 1.1:-70246997 | MS.gene88870:CDS |
| GAGGTTTCAAGTGATTTAGC+TGG | 0.478592 | 1.1:-70248911 | MS.gene88870:CDS |
| ATTGTTCTTTCCACTCCTCA+TGG | 0.483191 | 1.1:-70249010 | MS.gene88870:CDS |
| TTTACGGTTCAAGGGAAGAT+GGG | 0.487575 | 1.1:-70248437 | MS.gene88870:CDS |
| ATGGAGCACAAATTAAGATT+GGG | 0.487763 | 1.1:-70246787 | MS.gene88870:CDS |
| ATTCAAAGGAAGCACTTCCT+TGG | 0.487899 | 1.1:+70248511 | None:intergenic |
| TGATTTCTTGCTGAAAATGA+AGG | 0.488495 | 1.1:+70249060 | None:intergenic |
| GGAGTTGCAGTTGAAGCATA+AGG | 0.494734 | 1.1:+70249081 | None:intergenic |
| TCAAACGGCAAAGCACTAGT+TGG | 0.498148 | 1.1:+70245128 | None:intergenic |
| ATGAGTGCAGCATCAGTGCC+AGG | 0.498555 | 1.1:-70248392 | MS.gene88870:CDS |
| CTTGTCACAAGCTCAGCTTT+GGG | 0.498895 | 1.1:+70247224 | None:intergenic |
| GCCGCCCTTGAAAGTGAACC+TGG | 0.508285 | 1.1:-70245346 | MS.gene88870:CDS |
| CTACTAGAAGGCTCTTTCGT+CGG | 0.515227 | 1.1:-70248292 | MS.gene88870:CDS |
| TCCATTTCTTTACCATTCAA+AGG | 0.525558 | 1.1:+70248497 | None:intergenic |
| AAGTCCAGGTTCACTTTCAA+GGG | 0.528592 | 1.1:+70245342 | None:intergenic |
| AGACCTCAATCGTTGTTAGC+AGG | 0.530608 | 1.1:+70247343 | None:intergenic |
| CGTACTCTCCGTTGATGAGA+AGG | 0.532205 | 1.1:-70245724 | MS.gene88870:CDS |
| AACAAGCTTGATGTAAATGT+TGG | 0.533528 | 1.1:-70248560 | MS.gene88870:CDS |
| ATTTATGGAAGCTGATATGA+TGG | 0.544898 | 1.1:-70245210 | MS.gene88870:CDS |
| GCCAAAGCTTCCTCTTCAGA+AGG | 0.545333 | 1.1:+70248806 | None:intergenic |
| AATGTTGGAGCAGATTTACT+AGG | 0.550877 | 1.1:-70248545 | MS.gene88870:CDS |
| TTTGTAGAGACAATAGGAGG+AGG | 0.554599 | 1.1:+70245164 | None:intergenic |
| TCTGTAATTCTAACCTCGAT+AGG | 0.555447 | 1.1:+70247381 | None:intergenic |
| TAGTAAAGATTATGTGAAGG+AGG | 0.556511 | 1.1:-70248759 | MS.gene88870:CDS |
| TTTAGAGCAAAACTTGAAGT+GGG | 0.556785 | 1.1:+70248949 | None:intergenic |
| GGAGGTTGACGAAGATAATG+AGG | 0.568457 | 1.1:-70248741 | MS.gene88870:CDS |
| ACAAGAGAAGCCTTCTGAAG+AGG | 0.577741 | 1.1:-70248816 | MS.gene88870:CDS |
| TCACAAGCTCAGCTTTGGGT+AGG | 0.577775 | 1.1:+70247228 | None:intergenic |
| AACAATTGAACCATGAGGAG+TGG | 0.579544 | 1.1:+70249000 | None:intergenic |
| GAAAAGGCATATCTTCGTGA+AGG | 0.597129 | 1.1:-70246848 | MS.gene88870:CDS |
| CGGCCTGCTAACAACGATTG+AGG | 0.597746 | 1.1:-70247346 | MS.gene88870:intron |
| TCAACTTCCAAAACAGGTGA+CGG | 0.599928 | 1.1:+70248845 | None:intergenic |
| GAGTACTATGAGCCAAAACC+TGG | 0.601150 | 1.1:-70248620 | MS.gene88870:CDS |
| AGCCTTAACCTTCTCATCAA+CGG | 0.602910 | 1.1:+70245716 | None:intergenic |
| TCCAGGTTCACTTTCAAGGG+CGG | 0.605234 | 1.1:+70245345 | None:intergenic |
| AGGTAGTAAAGATTATGTGA+AGG | 0.610501 | 1.1:-70248762 | MS.gene88870:CDS |
| GTGCAGCATCAGTGCCAGGA+AGG | 0.618214 | 1.1:-70248388 | MS.gene88870:CDS |
| AGGTTAAGGCTCTTGTTGTG+AGG | 0.619077 | 1.1:-70245704 | MS.gene88870:CDS |
| GGATTGCTTGGCATCGAGTG+AGG | 0.619176 | 1.1:-70248271 | MS.gene88870:CDS |
| GGCAAAGCACTAGTTGGTAA+GGG | 0.627922 | 1.1:+70245134 | None:intergenic |
| AAGCATAAGGAAGAATTACA+AGG | 0.632192 | 1.1:+70249094 | None:intergenic |
| AAAAGGCATATCTTCGTGAA+GGG | 0.634782 | 1.1:-70246847 | MS.gene88870:CDS |
| TTTGTTATGTGATGTGAACA+AGG | 0.648082 | 1.1:-70248471 | MS.gene88870:CDS |
| AGCCTTCTAGTAGAAATCAA+CGG | 0.649854 | 1.1:+70248302 | None:intergenic |
| AGATTGGGAAAACTAACAGA+AGG | 0.651020 | 1.1:-70246772 | MS.gene88870:intron |
| ACTAGGTACAATGTTAACCA+AGG | 0.652350 | 1.1:-70248528 | MS.gene88870:CDS |
| TTAGAAACAATTGAACCATG+AGG | 0.654840 | 1.1:+70248995 | None:intergenic |
| ATGTGATGTGAACAAGGATG+CGG | 0.659417 | 1.1:-70248465 | MS.gene88870:CDS |
| ACACCAACAACAAAATCACC+AGG | 0.669393 | 1.1:+70248602 | None:intergenic |
| ACAGCTCAATGAACCTATCG+AGG | 0.680086 | 1.1:-70247394 | MS.gene88870:CDS |
| AAAAGATGGTGTGAGTGATG+AGG | 0.692251 | 1.1:-70248693 | MS.gene88870:CDS |
| TCCCCGATAAAATCTCTCTG+AGG | 0.706627 | 1.1:-70245674 | MS.gene88870:intron |
| ATTACAGAGTGGAATACTGG+CGG | 0.713190 | 1.1:-70247366 | MS.gene88870:CDS |
| TCGAGGTTAGAATTACAGAG+TGG | 0.742925 | 1.1:-70247377 | MS.gene88870:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTCAATATTATAAATCA+AGG | - | chr1.1:70246523-70246542 | MS.gene88870:intron | 10.0% |
| !! | ATACTGAAATTTAGTAAAAA+AGG | - | chr1.1:70246627-70246646 | MS.gene88870:intron | 15.0% |
| !!! | AAATTGAGTTATATTTTCAA+GGG | + | chr1.1:70247480-70247499 | None:intergenic | 15.0% |
| !!! | AAGATTAATGTTTTAAAAAC+CGG | - | chr1.1:70247802-70247821 | MS.gene88870:intron | 15.0% |
| !!! | TAAGTTTTAGTTGTTAATTT+TGG | - | chr1.1:70248334-70248353 | MS.gene88870:CDS | 15.0% |
| !! | AAAATTCATATCAAATTGGT+AGG | - | chr1.1:70246581-70246600 | MS.gene88870:intron | 20.0% |
| !! | AAATTCATATCAAATTGGTA+GGG | - | chr1.1:70246582-70246601 | MS.gene88870:intron | 20.0% |
| !! | AAATTCTCATGTGTATATTT+AGG | + | chr1.1:70246111-70246130 | None:intergenic | 20.0% |
| !! | ACCAAAAATTCATATCAAAT+TGG | - | chr1.1:70246577-70246596 | MS.gene88870:intron | 20.0% |
| !! | ATTAGCAAGAGATTATTATA+AGG | + | chr1.1:70247102-70247121 | None:intergenic | 20.0% |
| !! | TCCTATTAAAATTTCTTCTA+TGG | - | chr1.1:70248917-70248936 | MS.gene88870:CDS | 20.0% |
| !!! | AACATAAATTTCAAGTCAAT+GGG | + | chr1.1:70246882-70246901 | None:intergenic | 20.0% |
| !!! | AATCTGATCTTTTTAATGTT+TGG | - | chr1.1:70246770-70246789 | MS.gene88870:intron | 20.0% |
| !!! | ACCAATTTGATATGAATTTT+TGG | + | chr1.1:70246581-70246600 | None:intergenic | 20.0% |
| !!! | ACCATAGAAGAAATTTTAAT+AGG | + | chr1.1:70248921-70248940 | None:intergenic | 20.0% |
| !!! | ACTTTTTCTTTCAAATAAAG+AGG | - | chr1.1:70248874-70248893 | MS.gene88870:CDS | 20.0% |
| !!! | ATATGGAAAGATCTTTTTTA+CGG | + | chr1.1:70247392-70247411 | None:intergenic | 20.0% |
| !!! | ATCTGATCTTTTTAATGTTT+GGG | - | chr1.1:70246771-70246790 | MS.gene88870:intron | 20.0% |
| !!! | CAAATTGAGTTATATTTTCA+AGG | + | chr1.1:70247481-70247500 | None:intergenic | 20.0% |
| !!! | CCTTTGAAAAACTTAAAAAA+AGG | + | chr1.1:70245418-70245437 | None:intergenic | 20.0% |
| !!! | CCTTTTTTTAAGTTTTTCAA+AGG | - | chr1.1:70245415-70245434 | MS.gene88870:intron | 20.0% |
| !!! | GAAATTTGGCATAATTTTAT+AGG | - | chr1.1:70248091-70248110 | MS.gene88870:intron | 20.0% |
| !!! | GCATCTAAAACTTTTTTAAT+GGG | - | chr1.1:70247700-70247719 | MS.gene88870:intron | 20.0% |
| !!! | TGCATCTAAAACTTTTTTAA+TGG | - | chr1.1:70247699-70247718 | MS.gene88870:intron | 20.0% |
| ! | AAAGAAGATGAAGAAAAAGA+AGG | - | chr1.1:70245532-70245551 | MS.gene88870:intron | 25.0% |
| ! | AACTTGAATTTCATCATCAA+TGG | + | chr1.1:70245317-70245336 | None:intergenic | 25.0% |
| ! | AAGAAAATTATGCAGAAACA+AGG | + | chr1.1:70248165-70248184 | None:intergenic | 25.0% |
| ! | AATTTGGCATTGCTAATAAA+TGG | + | chr1.1:70246139-70246158 | None:intergenic | 25.0% |
| ! | ACATCTACTAAACTAAACAT+TGG | + | chr1.1:70245990-70246009 | None:intergenic | 25.0% |
| ! | ACTATATAGATAACAATGAC+AGG | + | chr1.1:70247636-70247655 | None:intergenic | 25.0% |
| ! | AGAAAATTATGCAGAAACAA+GGG | + | chr1.1:70248164-70248183 | None:intergenic | 25.0% |
| ! | AGATGAAGCAAAAAATTCTT+TGG | - | chr1.1:70247177-70247196 | MS.gene88870:intron | 25.0% |
| ! | ATTTACTCAAATAATGACAC+AGG | + | chr1.1:70246905-70246924 | None:intergenic | 25.0% |
| ! | ATTTATTAGCAATGCCAAAT+TGG | - | chr1.1:70246138-70246157 | MS.gene88870:intron | 25.0% |
| ! | CGATTGTTAAACTTTGAATT+TGG | - | chr1.1:70247567-70247586 | MS.gene88870:intron | 25.0% |
| ! | GAAAATATAGATAATGCACT+AGG | - | chr1.1:70247522-70247541 | MS.gene88870:intron | 25.0% |
| ! | GATAAACATTTATCCAAACA+GGG | + | chr1.1:70246197-70246216 | None:intergenic | 25.0% |
| ! | GTAAAAAAGATCTTTCCATA+TGG | - | chr1.1:70247391-70247410 | MS.gene88870:CDS | 25.0% |
| ! | TACTAAACTAAACATTGGAT+AGG | + | chr1.1:70245985-70246004 | None:intergenic | 25.0% |
| ! | TGATAAACATTTATCCAAAC+AGG | + | chr1.1:70246198-70246217 | None:intergenic | 25.0% |
| ! | TGTCATTGTTATCTATATAG+TGG | - | chr1.1:70247635-70247654 | MS.gene88870:intron | 25.0% |
| ! | TTAACTCTATAGTAATGAAC+TGG | - | chr1.1:70247610-70247629 | MS.gene88870:intron | 25.0% |
| ! | TTATTTGAAAGAAAAAGTCC+AGG | + | chr1.1:70248872-70248891 | None:intergenic | 25.0% |
| ! | TTGTATATAAAAAGCAAGCA+GGG | + | chr1.1:70248035-70248054 | None:intergenic | 25.0% |
| ! | TTGTTAAACTTTGAATTTGG+TGG | - | chr1.1:70247570-70247589 | MS.gene88870:intron | 25.0% |
| ! | TTGTTTATGTTAACCAAACA+AGG | + | chr1.1:70248617-70248636 | None:intergenic | 25.0% |
| !! | AACTTCCTTTTGTAATTGTT+GGG | - | chr1.1:70248564-70248583 | MS.gene88870:CDS | 25.0% |
| !! | AATCAAATTTTGAATCTTGG+AGG | + | chr1.1:70248699-70248718 | None:intergenic | 25.0% |
| !! | ACGAATCAAATTTTGAATCT+TGG | + | chr1.1:70248702-70248721 | None:intergenic | 25.0% |
| !! | GAACATAAATTTCAAGTCAA+TGG | + | chr1.1:70246883-70246902 | None:intergenic | 25.0% |
| !! | TAACTTCCTTTTGTAATTGT+TGG | - | chr1.1:70248563-70248582 | MS.gene88870:CDS | 25.0% |
| !! | TATGCCAAATTTCTCATTTT+GGG | + | chr1.1:70248084-70248103 | None:intergenic | 25.0% |
| !! | TATTTAGCAAACAGTAGTTT+TGG | - | chr1.1:70246084-70246103 | MS.gene88870:intron | 25.0% |
| !! | TCAAAGTTTAACAATCGTTT+TGG | + | chr1.1:70247564-70247583 | None:intergenic | 25.0% |
| !! | TCCATCTTTAATTTATGAGT+CGG | - | chr1.1:70246025-70246044 | MS.gene88870:intron | 25.0% |
| !! | TCTGATCTTTTTAATGTTTG+GGG | - | chr1.1:70246772-70246791 | MS.gene88870:intron | 25.0% |
| !! | TGCTTATTTCTTCATGAATT+CGG | - | chr1.1:70246924-70246943 | MS.gene88870:intron | 25.0% |
| !! | TTATGCCAAATTTCTCATTT+TGG | + | chr1.1:70248085-70248104 | None:intergenic | 25.0% |
| !! | TTGGCATAATTTTATAGGTA+TGG | - | chr1.1:70248096-70248115 | MS.gene88870:intron | 25.0% |
| !!! | TAAAGTGCTTCATTTTCAAA+CGG | + | chr1.1:70249087-70249106 | None:intergenic | 25.0% |
| !!! | TACTATCTTTGTTTCTATCA+TGG | - | chr1.1:70248185-70248204 | MS.gene88870:intron | 25.0% |
| !!! | TTCAAGTTTTGCTCTAAAAA+TGG | - | chr1.1:70245253-70245272 | MS.gene88870:intron | 25.0% |
| AAAAGAAGGAGAAGATAAGA+AGG | - | chr1.1:70245546-70245565 | MS.gene88870:intron | 30.0% | |
| AAACCAATTACATATCCCTA+AGG | + | chr1.1:70247756-70247775 | None:intergenic | 30.0% | |
| AAAGATGGAAGATGAAATCT+TGG | + | chr1.1:70246014-70246033 | None:intergenic | 30.0% | |
| AACAAGCTTGATGTAAATGT+TGG | - | chr1.1:70245637-70245656 | MS.gene88870:intron | 30.0% | |
| AACATTGGATAGGAGTAAAA+AGG | + | chr1.1:70245975-70245994 | None:intergenic | 30.0% | |
| AACCAATTACATATCCCTAA+GGG | + | chr1.1:70247755-70247774 | None:intergenic | 30.0% | |
| AAGCATAAGGAAGAATTACA+AGG | + | chr1.1:70245106-70245125 | None:intergenic | 30.0% | |
| AATGCCAGCTTGATAAAATA+TGG | + | chr1.1:70248371-70248390 | None:intergenic | 30.0% | |
| AGGATTACTAACAGTGATAA+CGG | + | chr1.1:70246704-70246723 | None:intergenic | 30.0% | |
| AGGTAGTAAAGATTATGTGA+AGG | - | chr1.1:70245435-70245454 | MS.gene88870:intron | 30.0% | |
| AGTAATTACACTGTTCAGAA+TGG | + | chr1.1:70247077-70247096 | None:intergenic | 30.0% | |
| ATAACAACGAAAAGGTAGTA+GGG | + | chr1.1:70248237-70248256 | None:intergenic | 30.0% | |
| ATACACCCAACAATTACAAA+AGG | + | chr1.1:70248572-70248591 | None:intergenic | 30.0% | |
| ATCAACAACATGAATGTAGT+TGG | + | chr1.1:70248801-70248820 | None:intergenic | 30.0% | |
| ATGGAGCACAAATTAAGATT+GGG | - | chr1.1:70247410-70247429 | MS.gene88870:intron | 30.0% | |
| ATTTATGGAAGCTGATATGA+TGG | - | chr1.1:70248987-70249006 | MS.gene88870:CDS | 30.0% | |
| CAATTACAGCAGCAAATAAA+TGG | + | chr1.1:70247681-70247700 | None:intergenic | 30.0% | |
| CCTATTGTCTCTACAAAATT+AGG | - | chr1.1:70249039-70249058 | MS.gene88870:CDS | 30.0% | |
| GAAGTTTCTGAACAAAAAGA+TGG | - | chr1.1:70245490-70245509 | MS.gene88870:intron | 30.0% | |
| GAATGGAAAAAAATTGTCCT+TGG | + | chr1.1:70247060-70247079 | None:intergenic | 30.0% | |
| GCAAGAAAGTAACGAAAAAT+AGG | + | chr1.1:70247252-70247271 | None:intergenic | 30.0% | |
| GGATGAAGTTGAAGAATAAA+TGG | + | chr1.1:70245085-70245104 | None:intergenic | 30.0% | |
| GTTGTATATAAAAAGCAAGC+AGG | + | chr1.1:70248036-70248055 | None:intergenic | 30.0% | |
| TAAAACCTCAGCAAACAAAA+TGG | + | chr1.1:70245854-70245873 | None:intergenic | 30.0% | |
| TAGTAAAGATTATGTGAAGG+AGG | - | chr1.1:70245438-70245457 | MS.gene88870:intron | 30.0% | |
| TATGGAGCACAAATTAAGAT+TGG | - | chr1.1:70247409-70247428 | MS.gene88870:intron | 30.0% | |
| TCATTAGACTTTACAGAGAT+AGG | + | chr1.1:70246724-70246743 | None:intergenic | 30.0% | |
| TCCATTTCTTTACCATTCAA+AGG | + | chr1.1:70245703-70245722 | None:intergenic | 30.0% | |
| TCCGACTCATAAATTAAAGA+TGG | + | chr1.1:70246029-70246048 | None:intergenic | 30.0% | |
| TCCTTTGAATGGTAAAGAAA+TGG | - | chr1.1:70245699-70245718 | MS.gene88870:CDS | 30.0% | |
| TCTTCCCAAAATGAGAAATT+TGG | - | chr1.1:70248077-70248096 | MS.gene88870:intron | 30.0% | |
| TGATTTCTTGCTGAAAATGA+AGG | + | chr1.1:70245140-70245159 | None:intergenic | 30.0% | |
| TTAACATAAACAAACGAGTC+AGG | - | chr1.1:70248624-70248643 | MS.gene88870:CDS | 30.0% | |
| TTAGAAACAATTGAACCATG+AGG | + | chr1.1:70245205-70245224 | None:intergenic | 30.0% | |
| TTAGGGATATGTAATTGGTT+TGG | - | chr1.1:70247755-70247774 | MS.gene88870:intron | 30.0% | |
| ! | AATTTTGTAGAGACAATAGG+AGG | + | chr1.1:70249039-70249058 | None:intergenic | 30.0% |
| ! | AGATAATGAGGTATTAGAAC+TGG | - | chr1.1:70245468-70245487 | MS.gene88870:intron | 30.0% |
| ! | ATACTTGATCATGATGATGT+AGG | - | chr1.1:70247120-70247139 | MS.gene88870:intron | 30.0% |
| ! | ATAGATTTCAATAGCCCTTT+TGG | - | chr1.1:70247870-70247889 | MS.gene88870:intron | 30.0% |
| ! | CCTAATTTTGTAGAGACAAT+AGG | + | chr1.1:70249042-70249061 | None:intergenic | 30.0% |
| ! | GAAAATGTAAGTTGCAGTTT+TGG | - | chr1.1:70247021-70247040 | MS.gene88870:CDS | 30.0% |
| ! | TTACCTCAGAGAGATTTTAT+CGG | + | chr1.1:70248529-70248548 | None:intergenic | 30.0% |
| ! | TTTAGAGCAAAACTTGAAGT+GGG | + | chr1.1:70245251-70245270 | None:intergenic | 30.0% |
| ! | TTTGTTATGTGATGTGAACA+AGG | - | chr1.1:70245726-70245745 | MS.gene88870:CDS | 30.0% |
| !! | AATGACTTGGTGTATATGTA+TGG | - | chr1.1:70246551-70246570 | MS.gene88870:intron | 30.0% |
| !! | ACGGAGTATTGATAAGATAA+TGG | + | chr1.1:70246685-70246704 | None:intergenic | 30.0% |
| !! | ATCTTAATTTGTGCTCCATA+TGG | + | chr1.1:70247409-70247428 | None:intergenic | 30.0% |
| !! | ATTTTGTTTGCTGAGGTTTT+AGG | - | chr1.1:70245853-70245872 | MS.gene88870:intron | 30.0% |
| !! | GATCATACAGAGAGTATTTA+TGG | - | chr1.1:70248972-70248991 | MS.gene88870:CDS | 30.0% |
| !! | TATGTAATTGGTTTGGTATC+AGG | - | chr1.1:70247762-70247781 | MS.gene88870:intron | 30.0% |
| !! | TCAATTTGAGTTCTTTTCGA+TGG | - | chr1.1:70247493-70247512 | MS.gene88870:intron | 30.0% |
| !!! | AAGTTTTGCTCTAAAAATGG+TGG | - | chr1.1:70245256-70245275 | MS.gene88870:intron | 30.0% |
| !!! | AGTTTTGCTCTAAAAATGGT+GGG | - | chr1.1:70245257-70245276 | MS.gene88870:intron | 30.0% |
| !!! | TTTTAGAGCAAAACTTGAAG+TGG | + | chr1.1:70245252-70245271 | None:intergenic | 30.0% |
| AAACCAAACCGTACTATTTG+GGG | + | chr1.1:70247983-70248002 | None:intergenic | 35.0% | |
| AAGGGCTATTGAAATCTATC+AGG | + | chr1.1:70247869-70247888 | None:intergenic | 35.0% | |
| AATCAAGGACTTGAATGACT+TGG | - | chr1.1:70246538-70246557 | MS.gene88870:intron | 35.0% | |
| AATGTTGGAGCAGATTTACT+AGG | - | chr1.1:70245652-70245671 | MS.gene88870:intron | 35.0% | |
| ACAAACCAAACCGTACTATT+TGG | + | chr1.1:70247985-70248004 | None:intergenic | 35.0% | |
| ACAGCAGCAAATAAATGGAA+AGG | + | chr1.1:70247676-70247695 | None:intergenic | 35.0% | |
| ACTAGGTACAATGTTAACCA+AGG | - | chr1.1:70245669-70245688 | MS.gene88870:intron | 35.0% | |
| AGAATTACAGAGTGGAATAC+TGG | - | chr1.1:70246828-70246847 | MS.gene88870:CDS | 35.0% | |
| AGATTGGGAAAACTAACAGA+AGG | - | chr1.1:70247425-70247444 | MS.gene88870:intron | 35.0% | |
| AGCCTTCTAGTAGAAATCAA+CGG | + | chr1.1:70245898-70245917 | None:intergenic | 35.0% | |
| AGGAATCCAACATGTTCATT+TGG | + | chr1.1:70248394-70248413 | None:intergenic | 35.0% | |
| AGGAGTGGAAAGAACAATAT+TGG | + | chr1.1:70245185-70245204 | None:intergenic | 35.0% | |
| AGTTAATCCAAAGTCCAAAC+AGG | - | chr1.1:70246401-70246420 | MS.gene88870:intron | 35.0% | |
| ATGGCTAAAATGTGACTTGA+AGG | - | chr1.1:70246477-70246496 | MS.gene88870:intron | 35.0% | |
| CAAACCAAACCGTACTATTT+GGG | + | chr1.1:70247984-70248003 | None:intergenic | 35.0% | |
| CAGCTTGATAAAATATGGAC+AGG | + | chr1.1:70248366-70248385 | None:intergenic | 35.0% | |
| CATAACAACGAAAAGGTAGT+AGG | + | chr1.1:70248238-70248257 | None:intergenic | 35.0% | |
| GATAATGCACTAGGAAAATC+AGG | - | chr1.1:70247531-70247550 | MS.gene88870:intron | 35.0% | |
| GATTGCATTGTCTTAGTTTC+TGG | - | chr1.1:70246446-70246465 | MS.gene88870:intron | 35.0% | |
| GGAGTGGAAAGAACAATATT+GGG | + | chr1.1:70245184-70245203 | None:intergenic | 35.0% | |
| TCAAGTCTTTCTGGGTTAAT+TGG | - | chr1.1:70248591-70248610 | MS.gene88870:CDS | 35.0% | |
| TCTGTAATTCTAACCTCGAT+AGG | + | chr1.1:70246819-70246838 | None:intergenic | 35.0% | |
| TTCATGAATTCGGATGTGTA+GGG | - | chr1.1:70246934-70246953 | MS.gene88870:intron | 35.0% | |
| ! | AAAAGGCATATCTTCGTGAA+GGG | - | chr1.1:70247350-70247369 | MS.gene88870:CDS | 35.0% |
| ! | AAGTTTTCCTGAAGAGCTTA+TGG | - | chr1.1:70246304-70246323 | MS.gene88870:intron | 35.0% |
| ! | ACAACAAAATCACCAGGTTT+TGG | + | chr1.1:70245592-70245611 | None:intergenic | 35.0% |
| ! | ATGAAGCACTTTATGCAAAC+TGG | - | chr1.1:70249094-70249113 | MS.gene88870:CDS | 35.0% |
| ! | CTACTACCTTTTCGTTGTTA+TGG | - | chr1.1:70248236-70248255 | MS.gene88870:intron | 35.0% |
| ! | CTGTCCATATTTTATCAAGC+TGG | - | chr1.1:70248364-70248383 | MS.gene88870:CDS | 35.0% |
| ! | TAAGCACTTGTTAGACTGTT+TGG | + | chr1.1:70246360-70246379 | None:intergenic | 35.0% |
| ! | TACCTCAGAGAGATTTTATC+GGG | + | chr1.1:70248528-70248547 | None:intergenic | 35.0% |
| ! | TTGATCATGATGATGTAGGT+GGG | - | chr1.1:70247124-70247143 | MS.gene88870:intron | 35.0% |
| !! | AAACCTGGTGATTTTGTTGT+TGG | - | chr1.1:70245592-70245611 | MS.gene88870:intron | 35.0% |
| !! | GTTTTAGGTAGAACACTTAG+TGG | - | chr1.1:70245868-70245887 | MS.gene88870:intron | 35.0% |
| !! | TAAAAATGGTGGGTTTGATG+AGG | - | chr1.1:70245267-70245286 | MS.gene88870:intron | 35.0% |
| !! | TACGGTTTGGTTTGTTCAAT+GGG | - | chr1.1:70247990-70248009 | MS.gene88870:intron | 35.0% |
| !! | TCTTTGGTGCTTAGTGAAAA+GGG | - | chr1.1:70247193-70247212 | MS.gene88870:CDS | 35.0% |
| !! | TTCTTTGGTGCTTAGTGAAA+AGG | - | chr1.1:70247192-70247211 | MS.gene88870:intron | 35.0% |
| !! | TTTCAATAGCCCTTTTGGTT+TGG | - | chr1.1:70247875-70247894 | MS.gene88870:intron | 35.0% |
| AAAAGATGGTGTGAGTGATG+AGG | - | chr1.1:70245504-70245523 | MS.gene88870:intron | 40.0% | |
| AAAGTCCAGGTTCACTTTCA+AGG | + | chr1.1:70248859-70248878 | None:intergenic | 40.0% | |
| AAATCTATCAGGCACCTAAC+TGG | + | chr1.1:70247858-70247877 | None:intergenic | 40.0% | |
| AACAATTGAACCATGAGGAG+TGG | + | chr1.1:70245200-70245219 | None:intergenic | 40.0% | |
| AAGTCCAGGTTCACTTTCAA+GGG | + | chr1.1:70248858-70248877 | None:intergenic | 40.0% | |
| AATGCACTAGGAAAATCAGG+CGG | - | chr1.1:70247534-70247553 | MS.gene88870:intron | 40.0% | |
| ACACCAACAACAAAATCACC+AGG | + | chr1.1:70245598-70245617 | None:intergenic | 40.0% | |
| ACATGTTGGATTCCTTTCAG+TGG | - | chr1.1:70248399-70248418 | MS.gene88870:CDS | 40.0% | |
| AGCCCTTAGGGATATGTAAT+TGG | - | chr1.1:70247750-70247769 | MS.gene88870:intron | 40.0% | |
| AGCCTTAACCTTCTCATCAA+CGG | + | chr1.1:70248484-70248503 | None:intergenic | 40.0% | |
| ATCTGACCCTTGAAAGACAA+AGG | + | chr1.1:70246429-70246448 | None:intergenic | 40.0% | |
| ATGCAGCCATAACAACGAAA+AGG | + | chr1.1:70248245-70248264 | None:intergenic | 40.0% | |
| ATGGCTGCATTGCTGTAAAT+AGG | - | chr1.1:70248255-70248274 | MS.gene88870:intron | 40.0% | |
| ATGGTTCCAGTTTCTACAAC+AGG | + | chr1.1:70245835-70245854 | None:intergenic | 40.0% | |
| ATGTGATGTGAACAAGGATG+CGG | - | chr1.1:70245732-70245751 | MS.gene88870:CDS | 40.0% | |
| ATTACAGAGTGGAATACTGG+CGG | - | chr1.1:70246831-70246850 | MS.gene88870:CDS | 40.0% | |
| ATTGTTCTTTCCACTCCTCA+TGG | - | chr1.1:70245187-70245206 | MS.gene88870:CDS | 40.0% | |
| CACTTTATGCAAACTGGAAG+TGG | - | chr1.1:70249100-70249119 | MS.gene88870:CDS | 40.0% | |
| CATGTTGGATTCCTTTCAGT+GGG | - | chr1.1:70248400-70248419 | MS.gene88870:CDS | 40.0% | |
| CTTCATGAATTCGGATGTGT+AGG | - | chr1.1:70246933-70246952 | MS.gene88870:intron | 40.0% | |
| GACATATCCATAAGCTCTTC+AGG | + | chr1.1:70246314-70246333 | None:intergenic | 40.0% | |
| GGCATTCCAAATGAACATGT+TGG | - | chr1.1:70248385-70248404 | MS.gene88870:CDS | 40.0% | |
| GTAAAACGACGTACAGGAAA+AGG | - | chr1.1:70247333-70247352 | MS.gene88870:intron | 40.0% | |
| TATCCAAACAGGGCAAAAGT+TGG | + | chr1.1:70246187-70246206 | None:intergenic | 40.0% | |
| TCAACTTCCAAAACAGGTGA+CGG | + | chr1.1:70245355-70245374 | None:intergenic | 40.0% | |
| TCACCATTGAAGAGCCAATT+TGG | + | chr1.1:70246155-70246174 | None:intergenic | 40.0% | |
| TCCATCTCAACTTCCAAAAC+AGG | + | chr1.1:70245361-70245380 | None:intergenic | 40.0% | |
| TCGAGGTTAGAATTACAGAG+TGG | - | chr1.1:70246820-70246839 | MS.gene88870:CDS | 40.0% | |
| TCTAAGAACGGTTCTTCTAC+AGG | - | chr1.1:70248734-70248753 | MS.gene88870:CDS | 40.0% | |
| TCTGACCCTTGAAAGACAAA+GGG | + | chr1.1:70246428-70246447 | None:intergenic | 40.0% | |
| TGGGTGTATCAAGTCTTTCT+GGG | - | chr1.1:70248583-70248602 | MS.gene88870:CDS | 40.0% | |
| TTGGGTGTATCAAGTCTTTC+TGG | - | chr1.1:70248582-70248601 | MS.gene88870:CDS | 40.0% | |
| TTTACGGTTCAAGGGAAGAT+GGG | - | chr1.1:70245760-70245779 | MS.gene88870:CDS | 40.0% | |
| TTTGTAGAGACAATAGGAGG+AGG | + | chr1.1:70249036-70249055 | None:intergenic | 40.0% | |
| ! | ACCTCAGAGAGATTTTATCG+GGG | + | chr1.1:70248527-70248546 | None:intergenic | 40.0% |
| ! | ATGCCAAATTGGCTCTTCAA+TGG | - | chr1.1:70246149-70246168 | MS.gene88870:intron | 40.0% |
| ! | CAAGGATGCGGAGAATTTTA+CGG | - | chr1.1:70245744-70245763 | MS.gene88870:CDS | 40.0% |
| ! | CATCGATGTTTCGAGTATCT+AGG | - | chr1.1:70247271-70247290 | MS.gene88870:intron | 40.0% |
| ! | CGGAGAATTTTACGGTTCAA+GGG | - | chr1.1:70245752-70245771 | MS.gene88870:CDS | 40.0% |
| ! | CTTGATCATGATGATGTAGG+TGG | - | chr1.1:70247123-70247142 | MS.gene88870:intron | 40.0% |
| ! | GAAAAGGCATATCTTCGTGA+AGG | - | chr1.1:70247349-70247368 | MS.gene88870:CDS | 40.0% |
| ! | GAGGTTTCAAGTGATTTAGC+TGG | - | chr1.1:70245286-70245305 | MS.gene88870:intron | 40.0% |
| ! | GAGTTCTTTTCGATGGATGA+TGG | - | chr1.1:70247500-70247519 | MS.gene88870:intron | 40.0% |
| ! | TATCCAACTTTTGCCCTGTT+TGG | - | chr1.1:70246181-70246200 | MS.gene88870:intron | 40.0% |
| ! | TCTTGGAGGATTTTCACGTT+AGG | + | chr1.1:70248685-70248704 | None:intergenic | 40.0% |
| ! | TGATCATGATGATGTAGGTG+GGG | - | chr1.1:70247125-70247144 | MS.gene88870:intron | 40.0% |
| ! | TTTTACGGTTCAAGGGAAGA+TGG | - | chr1.1:70245759-70245778 | MS.gene88870:CDS | 40.0% |
| !! | AAGGAAGTGCTTCCTTTGAA+TGG | - | chr1.1:70245688-70245707 | MS.gene88870:CDS | 40.0% |
| !! | ATTCAAAGGAAGCACTTCCT+TGG | + | chr1.1:70245689-70245708 | None:intergenic | 40.0% |
| !! | GACCGTTGATTTCTACTAGA+AGG | - | chr1.1:70245893-70245912 | MS.gene88870:intron | 40.0% |
| !! | GACTTGGTGTATATGTATGG+AGG | - | chr1.1:70246554-70246573 | MS.gene88870:intron | 40.0% |
| !! | GTACGGTTTGGTTTGTTCAA+TGG | - | chr1.1:70247989-70248008 | MS.gene88870:intron | 40.0% |
| !! | GTTGTTGGTGTTGTTGTTTC+AGG | - | chr1.1:70245607-70245626 | MS.gene88870:intron | 40.0% |
| !! | GTTTGGTTTGTTCAATGGGA+TGG | - | chr1.1:70247994-70248013 | MS.gene88870:intron | 40.0% |
| !! | TCACATTTTAGCCATCAAGC+TGG | + | chr1.1:70246472-70246491 | None:intergenic | 40.0% |
| !! | TGGAACCATTTTGTTTGCTG+AGG | - | chr1.1:70245846-70245865 | MS.gene88870:intron | 40.0% |
| !!! | ACCTGTTTTGGAAGTTGAGA+TGG | - | chr1.1:70245357-70245376 | MS.gene88870:intron | 40.0% |
| AACCCTGACCCCAAATAGTA+CGG | - | chr1.1:70247972-70247991 | MS.gene88870:intron | 45.0% | |
| AAGCAGGGATTTAGGTCTTG+AGG | + | chr1.1:70247904-70247923 | None:intergenic | 45.0% | |
| ACAGAAGGTGAGTGATTGCT+AGG | - | chr1.1:70247440-70247459 | MS.gene88870:intron | 45.0% | |
| ACAGCTCAATGAACCTATCG+AGG | - | chr1.1:70246803-70246822 | MS.gene88870:CDS | 45.0% | |
| AGACCTCAATCGTTGTTAGC+AGG | + | chr1.1:70246857-70246876 | None:intergenic | 45.0% | |
| CCTACTATCTCCTAGAGACA+GGG | - | chr1.1:70247947-70247966 | MS.gene88870:intron | 45.0% | |
| CTACTAGAAGGCTCTTTCGT+CGG | - | chr1.1:70245905-70245924 | MS.gene88870:intron | 45.0% | |
| CTGACCCTTGAAAGACAAAG+GGG | + | chr1.1:70246427-70246446 | None:intergenic | 45.0% | |
| CTTGTCACAAGCTCAGCTTT+GGG | + | chr1.1:70246976-70246995 | None:intergenic | 45.0% | |
| GAGTACTATGAGCCAAAACC+TGG | - | chr1.1:70245577-70245596 | MS.gene88870:intron | 45.0% | |
| GCTTAGTGAAAAGGGAGCTT+GGG | - | chr1.1:70247201-70247220 | MS.gene88870:CDS | 45.0% | |
| GGAGGTTGACGAAGATAATG+AGG | - | chr1.1:70245456-70245475 | MS.gene88870:intron | 45.0% | |
| GGAGTTGCAGTTGAAGCATA+AGG | + | chr1.1:70245119-70245138 | None:intergenic | 45.0% | |
| TCCCCGATAAAATCTCTCTG+AGG | - | chr1.1:70248523-70248542 | MS.gene88870:CDS | 45.0% | |
| TCCTACTATCTCCTAGAGAC+AGG | - | chr1.1:70247946-70247965 | MS.gene88870:intron | 45.0% | |
| TCTTGTCACAAGCTCAGCTT+TGG | + | chr1.1:70246977-70246996 | None:intergenic | 45.0% | |
| TGACCCCAAATAGTACGGTT+TGG | - | chr1.1:70247977-70247996 | MS.gene88870:intron | 45.0% | |
| TGCTGTGTAAAACGACGTAC+AGG | - | chr1.1:70247327-70247346 | MS.gene88870:intron | 45.0% | |
| TGCTTAGTGAAAAGGGAGCT+TGG | - | chr1.1:70247200-70247219 | MS.gene88870:CDS | 45.0% | |
| TTGAAGCGAAGCAGGGATTT+AGG | + | chr1.1:70247912-70247931 | None:intergenic | 45.0% | |
| TTGAGGACGCCAAACCAAAA+GGG | + | chr1.1:70247887-70247906 | None:intergenic | 45.0% | |
| TTGGAACGTTCTTCTTGCCA+AGG | - | chr1.1:70247040-70247059 | MS.gene88870:CDS | 45.0% | |
| ! | AAACCGTACTATTTGGGGTC+AGG | + | chr1.1:70247978-70247997 | None:intergenic | 45.0% |
| ! | AACCGTACTATTTGGGGTCA+GGG | + | chr1.1:70247977-70247996 | None:intergenic | 45.0% |
| ! | AACTCGTTTGAAGCGAAGCA+GGG | + | chr1.1:70247919-70247938 | None:intergenic | 45.0% |
| ! | ACAAGAGAAGCCTTCTGAAG+AGG | - | chr1.1:70245381-70245400 | MS.gene88870:intron | 45.0% |
| ! | AGGTTAAGGCTCTTGTTGTG+AGG | - | chr1.1:70248493-70248512 | MS.gene88870:CDS | 45.0% |
| ! | CGTGAAGGGACACTTTTAGA+CGG | - | chr1.1:70247364-70247383 | MS.gene88870:CDS | 45.0% |
| ! | CTCCGTTGATGAGAAGGTTA+AGG | - | chr1.1:70248479-70248498 | MS.gene88870:CDS | 45.0% |
| ! | CTGACAGGTTTGCTCTATTC+CGG | + | chr1.1:70247824-70247843 | None:intergenic | 45.0% |
| ! | GCGGAGAATTTTACGGTTCA+AGG | - | chr1.1:70245751-70245770 | MS.gene88870:CDS | 45.0% |
| !! | ACGTAGTCGAGCTCTAAGAA+CGG | - | chr1.1:70248722-70248741 | MS.gene88870:CDS | 45.0% |
| !! | CTGGGTTAATTGGCCTTGTT+TGG | - | chr1.1:70248601-70248620 | MS.gene88870:CDS | 45.0% |
| !! | TTAGTTTCTGGCCAGCTTGA+TGG | - | chr1.1:70246458-70246477 | MS.gene88870:intron | 45.0% |
| AAAGGGGCCTGTTTGGACTT+TGG | + | chr1.1:70246411-70246430 | None:intergenic | 50.0% | |
| ACAGGCCCCTTTGTCTTTCA+AGG | - | chr1.1:70246419-70246438 | MS.gene88870:intron | 50.0% | |
| ACATGCAGCAACCCACTGAA+AGG | + | chr1.1:70248414-70248433 | None:intergenic | 50.0% | |
| AGCAAACCTGTCAGGCATTC+AGG | - | chr1.1:70247830-70247849 | MS.gene88870:intron | 50.0% | |
| CAGGCATTCAGGAACCAGTT+AGG | - | chr1.1:70247841-70247860 | MS.gene88870:intron | 50.0% | |
| CAGGCCCCTTTGTCTTTCAA+GGG | - | chr1.1:70246420-70246439 | MS.gene88870:intron | 50.0% | |
| CGGAATAGAGCAAACCTGTC+AGG | - | chr1.1:70247822-70247841 | MS.gene88870:intron | 50.0% | |
| CTTGAGGACGCCAAACCAAA+AGG | + | chr1.1:70247888-70247907 | None:intergenic | 50.0% | |
| GAAAGACAAAGGGGCCTGTT+TGG | + | chr1.1:70246418-70246437 | None:intergenic | 50.0% | |
| GCCAAAGCTTCCTCTTCAGA+AGG | + | chr1.1:70245394-70245413 | None:intergenic | 50.0% | |
| GCTTTCTGCATGAGCCCTTA+GGG | - | chr1.1:70247738-70247757 | MS.gene88870:intron | 50.0% | |
| GGAAGGCCTGTTGTAGAAAC+TGG | - | chr1.1:70245826-70245845 | MS.gene88870:intron | 50.0% | |
| GTTTCTACAACAGGCCTTCC+TGG | + | chr1.1:70245826-70245845 | None:intergenic | 50.0% | |
| TCAGGGTTTACCCTGTCTCT+AGG | + | chr1.1:70247960-70247979 | None:intergenic | 50.0% | |
| TCCAGGTTCACTTTCAAGGG+CGG | + | chr1.1:70248855-70248874 | None:intergenic | 50.0% | |
| TGCTTTCTGCATGAGCCCTT+AGG | - | chr1.1:70247737-70247756 | MS.gene88870:intron | 50.0% | |
| ! | CAACTCGTTTGAAGCGAAGC+AGG | + | chr1.1:70247920-70247939 | None:intergenic | 50.0% |
| ! | CCCTGTCTCTAGGAGATAGT+AGG | + | chr1.1:70247950-70247969 | None:intergenic | 50.0% |
| ! | CGTACTCTCCGTTGATGAGA+AGG | - | chr1.1:70248473-70248492 | MS.gene88870:CDS | 50.0% |
| ! | GAACAAGCCGTCACCTGTTT+TGG | - | chr1.1:70245345-70245364 | MS.gene88870:CDS | 50.0% |
| ! | GCCTTCTGAAGAGGAAGCTT+TGG | - | chr1.1:70245390-70245409 | MS.gene88870:intron | 50.0% |
| !! | TCACAAGCTCAGCTTTGGGT+AGG | + | chr1.1:70246972-70246991 | None:intergenic | 50.0% |
| ATGAGTGCAGCATCAGTGCC+AGG | - | chr1.1:70245805-70245824 | MS.gene88870:intron | 55.0% | |
| CGGCCTGCTAACAACGATTG+AGG | - | chr1.1:70246851-70246870 | MS.gene88870:CDS | 55.0% | |
| CTGGTTCCTGAATGCCTGAC+AGG | + | chr1.1:70247839-70247858 | None:intergenic | 55.0% | |
| GGCTCTTTCGTCGGATTGCT+TGG | - | chr1.1:70245914-70245933 | MS.gene88870:intron | 55.0% | |
| ! | GGATTGCTTGGCATCGAGTG+AGG | - | chr1.1:70245926-70245945 | MS.gene88870:intron | 55.0% |
| GCCGCCCTTGAAAGTGAACC+TGG | - | chr1.1:70248851-70248870 | MS.gene88870:CDS | 60.0% | |
| GTGCAGCATCAGTGCCAGGA+AGG | - | chr1.1:70245809-70245828 | MS.gene88870:intron | 60.0% | |
| TCAAGGGCGGCAATGCTGCA+TGG | + | chr1.1:70248842-70248861 | None:intergenic | 60.0% | |
| ! | GCAAGCAGGGCATTCACGTC+TGG | + | chr1.1:70248022-70248041 | None:intergenic | 60.0% |
| ! | TGCTTGGCATCGAGTGAGGC+AGG | - | chr1.1:70245930-70245949 | MS.gene88870:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 70245079 | 70249140 | 70245079 | ID=MS.gene88870 |
| chr1.1 | mRNA | 70245079 | 70249140 | 70245079 | ID=MS.gene88870.t1;Parent=MS.gene88870 |
| chr1.1 | exon | 70248268 | 70249140 | 70248268 | ID=MS.gene88870.t1.exon1;Parent=MS.gene88870.t1 |
| chr1.1 | CDS | 70248268 | 70249140 | 70248268 | ID=cds.MS.gene88870.t1;Parent=MS.gene88870.t1 |
| chr1.1 | exon | 70247347 | 70247421 | 70247347 | ID=MS.gene88870.t1.exon2;Parent=MS.gene88870.t1 |
| chr1.1 | CDS | 70247347 | 70247421 | 70247347 | ID=cds.MS.gene88870.t1;Parent=MS.gene88870.t1 |
| chr1.1 | exon | 70247193 | 70247264 | 70247193 | ID=MS.gene88870.t1.exon3;Parent=MS.gene88870.t1 |
| chr1.1 | CDS | 70247193 | 70247264 | 70247193 | ID=cds.MS.gene88870.t1;Parent=MS.gene88870.t1 |
| chr1.1 | exon | 70246997 | 70247077 | 70246997 | ID=MS.gene88870.t1.exon4;Parent=MS.gene88870.t1 |
| chr1.1 | CDS | 70246997 | 70247077 | 70246997 | ID=cds.MS.gene88870.t1;Parent=MS.gene88870.t1 |
| chr1.1 | exon | 70246773 | 70246870 | 70246773 | ID=MS.gene88870.t1.exon5;Parent=MS.gene88870.t1 |
| chr1.1 | CDS | 70246773 | 70246870 | 70246773 | ID=cds.MS.gene88870.t1;Parent=MS.gene88870.t1 |
| chr1.1 | exon | 70245675 | 70245800 | 70245675 | ID=MS.gene88870.t1.exon6;Parent=MS.gene88870.t1 |
| chr1.1 | CDS | 70245675 | 70245800 | 70245675 | ID=cds.MS.gene88870.t1;Parent=MS.gene88870.t1 |
| chr1.1 | exon | 70245324 | 70245372 | 70245324 | ID=MS.gene88870.t1.exon7;Parent=MS.gene88870.t1 |
| chr1.1 | CDS | 70245324 | 70245372 | 70245324 | ID=cds.MS.gene88870.t1;Parent=MS.gene88870.t1 |
| chr1.1 | exon | 70245079 | 70245237 | 70245079 | ID=MS.gene88870.t1.exon8;Parent=MS.gene88870.t1 |
| chr1.1 | CDS | 70245079 | 70245237 | 70245079 | ID=cds.MS.gene88870.t1;Parent=MS.gene88870.t1 |
| Gene Sequence |
| Protein sequence |
