AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280010391.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010391.01.T01 MTR_2g083220 76.755 413 7 3 1 382 1 355 0.0 624
MsG0280010391.01.T01 MTR_4g081110 57.245 421 87 5 1 390 1 359 4.63e-160 457
MsG0280010391.01.T01 MTR_1g069705 41.419 437 135 8 1 403 12 361 1.59e-112 336
MsG0280010391.01.T01 MTR_2g099185 39.103 156 63 2 195 319 360 514 7.16e-26 109
MsG0280010391.01.T01 MTR_2g099185 39.103 156 63 2 195 319 355 509 7.74e-26 109
MsG0280010391.01.T01 MTR_2g099185 38.854 157 64 2 195 320 355 510 1.52e-25 109
MsG0280010391.01.T01 MTR_5g065510 52.308 65 30 1 31 94 21 85 3.28e-14 68.6
MsG0280010391.01.T01 MTR_1g007590 55.738 61 25 1 36 94 68 128 2.07e-13 72.4
MsG0280010391.01.T01 MTR_3g092100 32.386 176 73 7 24 196 61 193 1.41e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010391.01.T01 AT4G27100 52.785 413 97 6 1 382 1 346 7.79e-135 393
MsG0280010391.01.T01 AT4G27100 52.785 413 97 6 1 382 1 346 1.05e-134 393
MsG0280010391.01.T01 AT5G54780 51.691 414 99 6 1 382 1 345 1.73e-130 382
MsG0280010391.01.T01 AT2G20440 41.119 411 132 5 1 380 7 338 7.32e-110 329
MsG0280010391.01.T01 AT2G20440 41.119 411 132 5 1 380 7 338 7.32e-110 329
MsG0280010391.01.T01 AT4G28550 41.542 402 125 5 1 371 7 329 4.18e-108 325
MsG0280010391.01.T01 AT2G20440 44.101 356 122 4 1 325 7 316 1.15e-106 318
MsG0280010391.01.T01 AT4G28550 43.324 367 129 5 1 334 7 327 1.95e-106 318
MsG0280010391.01.T01 AT4G28550 44.571 350 117 4 1 319 7 310 4.20e-105 314
MsG0280010391.01.T01 AT2G20440 36.397 272 88 4 136 376 1 218 5.09e-56 187
MsG0280010391.01.T01 AT2G43490 38.202 178 78 2 187 333 335 511 1.58e-28 118
MsG0280010391.01.T01 AT2G43490 42.857 91 50 2 25 113 35 125 3.08e-13 72.0
MsG0280010391.01.T01 AT2G43490 38.202 178 78 2 187 333 335 511 1.58e-28 118
MsG0280010391.01.T01 AT2G43490 42.857 91 50 2 25 113 35 125 3.08e-13 72.0
MsG0280010391.01.T01 AT2G43490 38.202 178 78 2 187 333 339 515 1.84e-28 118
MsG0280010391.01.T01 AT2G43490 44.186 86 46 2 30 113 44 129 2.87e-12 68.9
MsG0280010391.01.T01 AT2G43490 38.202 178 78 2 187 333 339 515 1.84e-28 118
MsG0280010391.01.T01 AT2G43490 44.186 86 46 2 30 113 44 129 2.87e-12 68.9
MsG0280010391.01.T01 AT2G43490 38.202 178 78 2 187 333 339 515 1.84e-28 118
MsG0280010391.01.T01 AT2G43490 44.186 86 46 2 30 113 44 129 2.87e-12 68.9
MsG0280010391.01.T01 AT2G43490 38.202 178 78 2 187 333 339 515 1.84e-28 118
MsG0280010391.01.T01 AT2G43490 44.186 86 46 2 30 113 44 129 2.87e-12 68.9
MsG0280010391.01.T01 AT2G43490 38.202 178 78 2 187 333 339 515 1.89e-28 118
MsG0280010391.01.T01 AT2G43490 44.186 86 46 2 30 113 44 129 2.89e-12 68.9
MsG0280010391.01.T01 AT2G43490 40.000 165 67 2 187 320 339 502 3.38e-28 117
MsG0280010391.01.T01 AT2G43490 44.186 86 46 2 30 113 44 129 1.76e-12 69.7
MsG0280010391.01.T01 AT3G59570 38.462 169 72 2 183 320 339 506 2.59e-26 111
MsG0280010391.01.T01 AT3G59570 47.826 69 35 1 30 97 44 112 5.14e-11 65.1
MsG0280010391.01.T01 AT3G59570 38.462 169 72 2 183 320 339 506 2.69e-26 111
MsG0280010391.01.T01 AT3G59570 47.826 69 35 1 30 97 44 112 5.11e-11 65.1
MsG0280010391.01.T01 AT3G59570 38.462 169 72 2 183 320 339 506 2.85e-26 111
MsG0280010391.01.T01 AT3G59570 43.023 86 47 2 30 113 44 129 4.35e-11 65.1
MsG0280010391.01.T01 AT5G41940 26.842 380 182 10 34 320 87 463 1.35e-24 106

Find 127 sgRNAs with CRISPR-Local

Find 328 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCTTGTCTGGATTTCTTTC+AGG 0.106976 2:+68965310 None:intergenic
AAGAAAACTTGTCAAAATTA+TGG 0.190885 2:-68965014 MsG0280010391.01.T01:CDS
ATAAAATACCTATATGTTTA+TGG 0.198183 2:+68964305 None:intergenic
CCTATATGTTTATGGAGTTT+TGG 0.239607 2:+68964313 None:intergenic
CGCCAATTGTTTCCTCTTGT+TGG 0.248172 2:-68965403 MsG0280010391.01.T01:CDS
CTTCATTATTGTCTCCTATA+AGG 0.248619 2:+68962141 None:intergenic
ATGTTGGTGCTAGGCTTTCT+TGG 0.260513 2:+68962237 None:intergenic
AGGGAGTCCATCCATCAATT+AGG 0.263963 2:-68965795 MsG0280010391.01.T01:CDS
GGAGGCTCAACTAAGTAATT+TGG 0.270154 2:-68964359 MsG0280010391.01.T01:CDS
CATCAATTAGGGGAGAAGTT+TGG 0.292286 2:-68965783 MsG0280010391.01.T01:CDS
ATCAATTAGGGGAGAAGTTT+GGG 0.302400 2:-68965782 MsG0280010391.01.T01:CDS
CTGTCAATGTTATACCTTAT+AGG 0.304756 2:-68962155 MsG0280010391.01.T01:three_prime_UTR
TGGTTTGCAGAATTGATTAA+AGG 0.313100 2:-68962100 MsG0280010391.01.T01:three_prime_UTR
AAACACTAAGTCCAAGAAAA+TGG 0.315609 2:-68966108 MsG0280010391.01.T01:CDS
GCATTGTTGTTGAATGTATA+GGG 0.322322 2:-68967374 None:intergenic
CAAACTTCTCCCCTAATTGA+TGG 0.323763 2:+68965784 None:intergenic
GGGAGTCCATCCATCAATTA+GGG 0.330099 2:-68965794 MsG0280010391.01.T01:CDS
GATGTACTGGTCGCACTCTT+GGG 0.336065 2:-68964384 MsG0280010391.01.T01:CDS
CAGGAATCTAGATGCCAAAA+AGG 0.337323 2:-68962744 MsG0280010391.01.T01:three_prime_UTR
AGTTCCCTCAGGGAATTTAA+TGG 0.338293 2:+68962063 None:intergenic
TGCATTGTTGTTGAATGTAT+AGG 0.342965 2:-68967375 None:intergenic
AGATGTACTGGTCGCACTCT+TGG 0.345747 2:-68964385 MsG0280010391.01.T01:CDS
AAATTCACAAACCTATTTGA+TGG 0.347183 2:+68965182 None:intergenic
ATCATCCAAGCCTCGCTTCA+TGG 0.349825 2:+68963075 None:intergenic
ATGTTAACTCTCCATCAAAT+AGG 0.350184 2:-68965193 MsG0280010391.01.T01:intron
TCATACATCAAGAACAAATA+AGG 0.353993 2:+68963275 None:intergenic
CTTTCGTCAAATGTACTCTT+CGG 0.363004 2:+68965736 None:intergenic
AGAAAACTTGTCAAAATTAT+GGG 0.382772 2:-68965013 MsG0280010391.01.T01:CDS
TACTTCCTCAAGATAATAAT+AGG 0.382978 2:-68965279 MsG0280010391.01.T01:CDS
TTTGTGATTCATTGTACCTA+TGG 0.385679 2:-68963980 MsG0280010391.01.T01:CDS
GTTTGACTGTTGTTCTGTTC+CGG 0.390399 2:+68965593 None:intergenic
TTTACAGAATCTATACTTGA+AGG 0.394310 2:+68965256 None:intergenic
CTAACACTATCTCATTAATT+CGG 0.400546 2:+68963834 None:intergenic
GTTCCCTCAGGGAATTTAAT+GGG 0.404583 2:+68962064 None:intergenic
GAATTTAATGGGTGGAAACT+TGG 0.405507 2:+68962075 None:intergenic
CCAAAACTCCATAAACATAT+AGG 0.406934 2:-68964313 MsG0280010391.01.T01:intron
ATAATCATGGGGTCTTGAAT+TGG 0.410294 2:+68965334 None:intergenic
GCAACAAGGAAAACAGATAT+AGG 0.410679 2:+68963130 None:intergenic
ATTTACTCAAGAAGGGTATC+TGG 0.414638 2:-68966077 MsG0280010391.01.T01:CDS
CATCTCAAGATTCAAGATCA+AGG 0.418043 2:-68967114 MsG0280010391.01.T01:intron
GAGAGACAAAATATGAGAAA+TGG 0.418641 2:-68963178 MsG0280010391.01.T01:CDS
ATCATTACTGCAATCTGGTC+TGG 0.419284 2:+68967142 None:intergenic
CATTTGAGATGATTAAATGA+TGG 0.423009 2:-68962193 MsG0280010391.01.T01:three_prime_UTR
CAAGAAGGGTATCTGGATAT+AGG 0.425363 2:-68966070 MsG0280010391.01.T01:CDS
AACCGATGCTGTCAACTATT+CGG 0.426395 2:+68965559 None:intergenic
CTTGTGATGTGGAGAGATCC+AGG 0.427729 2:-68967191 MsG0280010391.01.T01:exon
ATATTCTTGCAGTTTATGCT+TGG 0.433846 2:-68964990 MsG0280010391.01.T01:CDS
TTTCGTCAAATGTACTCTTC+GGG 0.441710 2:+68965737 None:intergenic
CTTGATCTTGAATCTTGAGA+TGG 0.445826 2:+68967115 None:intergenic
ACTTGTCAACTCAAAGAGAA+TGG 0.449458 2:+68967349 None:intergenic
GCTTGGATAGATAAAGAAGT+TGG 0.451389 2:-68964973 MsG0280010391.01.T01:CDS
TTGACGTGGTACGCACTGAT+AGG 0.451450 2:-68965059 MsG0280010391.01.T01:CDS
TTGTGATTCATTGTACCTAT+GGG 0.454384 2:-68963979 MsG0280010391.01.T01:CDS
TTGTTTCCTCTTGTTGGAAG+TGG 0.462346 2:-68965397 MsG0280010391.01.T01:CDS
CATCATTTAATCATCTCAAA+TGG 0.467433 2:+68962194 None:intergenic
ATTTCTTTCAGGCATAATCA+TGG 0.468298 2:+68965321 None:intergenic
CATAGTTCAACCACTCAAAC+CGG 0.468354 2:-68965612 MsG0280010391.01.T01:intron
AGTACAGCTAATCCCTTGTC+TGG 0.469428 2:+68965298 None:intergenic
CGAGGAAATTTCAGATGTAC+TGG 0.471593 2:-68964397 MsG0280010391.01.T01:intron
GGAACATCATTACTGCAATC+TGG 0.472237 2:+68967137 None:intergenic
CATGATGCATTTACTCAAGA+AGG 0.472341 2:-68966085 MsG0280010391.01.T01:CDS
AAAGAATCAGCTGAAACTCC+TGG 0.480245 2:+68967173 None:intergenic
TAGTTGACAGCATCGGTTCA+CGG 0.482237 2:-68965554 MsG0280010391.01.T01:intron
TGGTCGCACTCTTGGGGTGG+AGG 0.488394 2:-68964377 MsG0280010391.01.T01:CDS
TCATCCATTCATGTCATTGA+GGG 0.488625 2:-68961905 MsG0280010391.01.T01:three_prime_UTR
GATGGAGAGTTAACATCCAC+TGG 0.490352 2:+68965200 None:intergenic
TGGCCATCATCAGTAATTAC+AGG 0.493011 2:+68965358 None:intergenic
CAGATATTGAATGACACAAC+AGG 0.495165 2:-68962763 MsG0280010391.01.T01:three_prime_UTR
TTCCAACAAGAGGAAACAAT+TGG 0.498284 2:+68965401 None:intergenic
TTTCTTTCAGGCATAATCAT+GGG 0.498518 2:+68965322 None:intergenic
ATACTCCATGAAGCGAGGCT+TGG 0.505099 2:-68963080 MsG0280010391.01.T01:three_prime_UTR
TAGGTACAATGAATCACAAA+AGG 0.507991 2:+68963983 None:intergenic
GTCATCCATTCATGTCATTG+AGG 0.509241 2:-68961906 MsG0280010391.01.T01:three_prime_UTR
CAACTATTCGGTTATTTGAG+TGG 0.509557 2:+68965571 None:intergenic
TAACATACAACAGTTCCCTC+AGG 0.510849 2:+68962052 None:intergenic
TCTTTCAGTTTCTTGTGATG+TGG 0.511895 2:-68967202 MsG0280010391.01.T01:exon
CTTGTCAACTCAAAGAGAAT+GGG 0.517137 2:+68967350 None:intergenic
ATTTGAGATGATTAAATGAT+GGG 0.519694 2:-68962192 MsG0280010391.01.T01:three_prime_UTR
GATAGTGTTAGAACACCAAC+TGG 0.522261 2:-68963822 MsG0280010391.01.T01:CDS
GTAAAAGCTGAGGGCGTCAA+AGG 0.527510 2:-68963233 MsG0280010391.01.T01:CDS
TCACCTGTAATTACTGATGA+TGG 0.529934 2:-68965361 MsG0280010391.01.T01:CDS
TTGACCCTCAATGACATGAA+TGG 0.536277 2:+68961901 None:intergenic
CACAAACACAAGAAGAAACA+AGG 0.539544 2:+68967249 None:intergenic
AGGAAAACAGATATAGGAAG+AGG 0.540547 2:+68963136 None:intergenic
AGCAAAGTCAATACGACAAG+TGG 0.540931 2:-68963208 MsG0280010391.01.T01:CDS
TTGATCTTGAATCTTGAGAT+GGG 0.545349 2:+68967116 None:intergenic
GTGTATCCATCCAAAAGAGC+AGG 0.551455 2:-68962007 MsG0280010391.01.T01:three_prime_UTR
ATCAAATAAGAGAACGCCGA+AGG 0.555836 2:-68965711 MsG0280010391.01.T01:intron
AGTCAATCAAATTTAGAGTG+TGG 0.558511 2:-68962120 MsG0280010391.01.T01:three_prime_UTR
TACTGGTCGCACTCTTGGGG+TGG 0.558646 2:-68964380 MsG0280010391.01.T01:CDS
GAAGGCCTATTATTATCTTG+AGG 0.560973 2:+68965274 None:intergenic
TGGAGAACAGAACATATTGG+TGG 0.562536 2:-68964062 MsG0280010391.01.T01:intron
CTTCTCCCCTAATTGATGGA+TGG 0.563411 2:+68965788 None:intergenic
TCAATGGATATGTTGGTGCT+AGG 0.564668 2:+68962228 None:intergenic
TCAGGATGCAATATGCTACA+TGG 0.565622 2:-68965438 MsG0280010391.01.T01:intron
TCATGGGGTCTTGAATTGGT+TGG 0.566507 2:+68965338 None:intergenic
ATTTAATCATCTCAAATGGA+AGG 0.566778 2:+68962198 None:intergenic
TTCTTTCAGGCATAATCATG+GGG 0.568000 2:+68965323 None:intergenic
ATGTACTGGTCGCACTCTTG+GGG 0.573792 2:-68964383 MsG0280010391.01.T01:CDS
AAAGAAGTTGGATACGGTCA+AGG 0.579690 2:-68964961 MsG0280010391.01.T01:intron
TGATTCATTGTACCTATGGG+AGG 0.581982 2:-68963976 MsG0280010391.01.T01:intron
ATCAGCTTCTGTAAAAGCTG+AGG 0.587749 2:-68963243 MsG0280010391.01.T01:CDS
AATCGACCACTTCCAACAAG+AGG 0.590144 2:+68965391 None:intergenic
ATAGATAAAGAAGTTGGATA+CGG 0.592454 2:-68964967 MsG0280010391.01.T01:CDS
GTTAGAACACCAACTGGTAG+CGG 0.592627 2:-68963816 MsG0280010391.01.T01:CDS
CCACCCATTAAATTCCCTGA+GGG 0.594717 2:-68962067 MsG0280010391.01.T01:three_prime_UTR
AACATACAACAGTTCCCTCA+GGG 0.598715 2:+68962053 None:intergenic
AGGCTTGGATGATGTTGTCA+AGG 0.606238 2:-68963065 MsG0280010391.01.T01:intron
TCAGCTTCTGTAAAAGCTGA+GGG 0.607394 2:-68963242 MsG0280010391.01.T01:CDS
CTCTGAGACGAATCTACCGA+GGG 0.607571 2:-68966042 MsG0280010391.01.T01:CDS
ATGATGCATTTACTCAAGAA+GGG 0.608798 2:-68966084 MsG0280010391.01.T01:CDS
TTGTTCTGTTCCGGTTTGAG+TGG 0.614256 2:+68965602 None:intergenic
CCTGAAAGAAATCCAGACAA+GGG 0.614978 2:-68965310 MsG0280010391.01.T01:CDS
AAGCCAGACACACCTCCCAT+AGG 0.625296 2:+68963964 None:intergenic
AACCGAATAGTTGACAGCAT+CGG 0.625488 2:-68965561 MsG0280010391.01.T01:CDS
GCCTGAAAGAAATCCAGACA+AGG 0.626590 2:-68965311 MsG0280010391.01.T01:CDS
AGAACAGAACATATTGGTGG+AGG 0.627107 2:-68964059 MsG0280010391.01.T01:intron
GGTACGCACTGATAGGACAT+TGG 0.627837 2:-68965052 MsG0280010391.01.T01:CDS
TCTTCAACACACCAGCAACA+AGG 0.631055 2:+68963116 None:intergenic
CCCTCAGGGAATTTAATGGG+TGG 0.639260 2:+68962067 None:intergenic
AGAACGCAAATTGCAAACAA+TGG 0.655929 2:-68963783 MsG0280010391.01.T01:intron
CAGACAAGAAACTAATCCAG+TGG 0.668020 2:-68965216 MsG0280010391.01.T01:CDS
ACTCTGAGACGAATCTACCG+AGG 0.686204 2:-68966043 MsG0280010391.01.T01:CDS
TCCACCCATTAAATTCCCTG+AGG 0.686227 2:-68962068 MsG0280010391.01.T01:three_prime_UTR
GGAGTCCATCCATCAATTAG+GGG 0.691468 2:-68965793 MsG0280010391.01.T01:CDS
ATACGTTTCAGGTCTTGACG+TGG 0.710991 2:-68965073 MsG0280010391.01.T01:intron
TCTGAGACGAATCTACCGAG+GGG 0.796528 2:-68966041 MsG0280010391.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACTAAAGTTTTTTTTATAAA+TGG - Chr2:68962458-68962477 MsG0280010391.01.T01:intron 10.0%
!!! TTTTATTCAACAAATTTTAA+TGG + Chr2:68965118-68965137 None:intergenic 10.0%
!!! TTTTTTTTATTCTAATAAGA+AGG - Chr2:68964413-68964432 MsG0280010391.01.T01:intron 10.0%
!! AATTTAACACATACATAAAA+AGG + Chr2:68966435-68966454 None:intergenic 15.0%
!! ATAAAATACCTATATGTTTA+TGG + Chr2:68964954-68964973 None:intergenic 15.0%
!!! AAAGTTTGATTTTTATTTCT+GGG - Chr2:68962181-68962200 MsG0280010391.01.T01:three_prime_UTR 15.0%
!!! AATTTACTGTCTTTTAATTT+TGG - Chr2:68965174-68965193 MsG0280010391.01.T01:intron 15.0%
!!! ATATCATAAACTGTTTTAAT+GGG + Chr2:68965864-68965883 None:intergenic 15.0%
!!! ATTTACATTTTATTGAACAA+TGG - Chr2:68965340-68965359 MsG0280010391.01.T01:CDS 15.0%
!!! GTTTTTGTTATAATTTTGTT+TGG - Chr2:68962203-68962222 MsG0280010391.01.T01:three_prime_UTR 15.0%
!!! TATATCATAAACTGTTTTAA+TGG + Chr2:68965865-68965884 None:intergenic 15.0%
!! AAAAAAATCAATGGATATGT+TGG + Chr2:68967038-68967057 None:intergenic 20.0%
!! AAACAAAAAATGTTAACTAG+TGG - Chr2:68966699-68966718 MsG0280010391.01.T01:intron 20.0%
!! AAGAAAACTTGTCAAAATTA+TGG - Chr2:68964242-68964261 MsG0280010391.01.T01:intron 20.0%
!! AATAAACCAAGTAAACAAAT+TGG - Chr2:68964443-68964462 MsG0280010391.01.T01:intron 20.0%
!! ACATTGAAACAATTATGAAA+TGG + Chr2:68963581-68963600 None:intergenic 20.0%
!! AGAAAACTTGTCAAAATTAT+GGG - Chr2:68964243-68964262 MsG0280010391.01.T01:intron 20.0%
!! ATAATCATCAATACTTTCAA+GGG + Chr2:68963349-68963368 None:intergenic 20.0%
!! CAGAAATAAAAATCAAACTT+TGG + Chr2:68962182-68962201 None:intergenic 20.0%
!! TAAAAGAGATAATAGAGATA+AGG + Chr2:68964736-68964755 None:intergenic 20.0%
!! TAATACAAAAAAGAAAAGAC+AGG - Chr2:68967323-68967342 MsG0280010391.01.T01:five_prime_UTR 20.0%
!! TGTTAAAAAATTTCAAACCA+GGG - Chr2:68963442-68963461 MsG0280010391.01.T01:intron 20.0%
!! TTACCATGTGATTTATATTA+CGG + Chr2:68964142-68964161 None:intergenic 20.0%
!! TTGTTAAAAAATTTCAAACC+AGG - Chr2:68963441-68963460 MsG0280010391.01.T01:intron 20.0%
!! TTTCCATTAATAATTTCTTC+AGG + Chr2:68965074-68965093 None:intergenic 20.0%
!!! AAATTTTTAACAGATGATGT+GGG - Chr2:68965944-68965963 MsG0280010391.01.T01:intron 20.0%
!!! ATTTGAGATGATTAAATGAT+GGG - Chr2:68967064-68967083 MsG0280010391.01.T01:intron 20.0%
!!! CAAAGTTTGATTTTTATTTC+TGG - Chr2:68962180-68962199 MsG0280010391.01.T01:three_prime_UTR 20.0%
!!! CAAGAATTTTTATGTTTATG+TGG - Chr2:68963399-68963418 MsG0280010391.01.T01:intron 20.0%
!!! TATCATAAACTGTTTTAATG+GGG + Chr2:68965863-68965882 None:intergenic 20.0%
!!! TTAAAGATAGTGTCTTTTTT+TGG - Chr2:68962818-68962837 MsG0280010391.01.T01:intron 20.0%
!!! TTTTCTTAATTTTGGAAACT+CGG - Chr2:68963058-68963077 MsG0280010391.01.T01:intron 20.0%
! AAAAAAAACTACTACTTGCA+TGG + Chr2:68964399-68964418 None:intergenic 25.0%
! AAAATGTTAACTAGTGGTTA+AGG - Chr2:68966705-68966724 MsG0280010391.01.T01:intron 25.0%
! AAATATGATTAAGATCAGAC+AGG + Chr2:68963315-68963334 None:intergenic 25.0%
! AAATTCACAAACCTATTTGA+TGG + Chr2:68964077-68964096 None:intergenic 25.0%
! AACGTATTATGTGCATAAAA+AGG + Chr2:68964170-68964189 None:intergenic 25.0%
! AAGTATGTAATTCAAGTGTT+CGG - Chr2:68964785-68964804 MsG0280010391.01.T01:intron 25.0%
! AATAAACTTTAATTGCTTGC+AGG - Chr2:68966996-68967015 MsG0280010391.01.T01:intron 25.0%
! AATAGTCATAAGCAATAAGT+TGG + Chr2:68966830-68966849 None:intergenic 25.0%
! AATGGAAGGAAAAAAATCAA+TGG + Chr2:68967047-68967066 None:intergenic 25.0%
! ACCGTAGTACTATATATATA+TGG + Chr2:68965608-68965627 None:intergenic 25.0%
! ACGTATTATGTGCATAAAAA+GGG + Chr2:68964169-68964188 None:intergenic 25.0%
! AGACTTTGCAATAAATGTAT+TGG + Chr2:68966659-68966678 None:intergenic 25.0%
! ATAGATAAAGAAGTTGGATA+CGG - Chr2:68964289-68964308 MsG0280010391.01.T01:intron 25.0%
! ATCAAGAAGAATTATCATTG+GGG + Chr2:68964658-68964677 None:intergenic 25.0%
! ATGCCTGAAGAAATTATTAA+TGG - Chr2:68965068-68965087 MsG0280010391.01.T01:intron 25.0%
! ATTTAATCATCTCAAATGGA+AGG + Chr2:68967061-68967080 None:intergenic 25.0%
! CATAATCATCAATACTTTCA+AGG + Chr2:68963350-68963369 None:intergenic 25.0%
! CATCAAGAAGAATTATCATT+GGG + Chr2:68964659-68964678 None:intergenic 25.0%
! CATCATTTAATCATCTCAAA+TGG + Chr2:68967065-68967084 None:intergenic 25.0%
! CTAACACTATCTCATTAATT+CGG + Chr2:68965425-68965444 None:intergenic 25.0%
! CTCACAAAAATATTTGAGAA+AGG - Chr2:68966555-68966574 MsG0280010391.01.T01:intron 25.0%
! GATAACATTGTGTGTTAAAT+GGG - Chr2:68962712-68962731 MsG0280010391.01.T01:three_prime_UTR 25.0%
! GCCATATATATATAGTACTA+CGG - Chr2:68965604-68965623 MsG0280010391.01.T01:CDS 25.0%
! TACTTCCTCAAGATAATAAT+AGG - Chr2:68963977-68963996 MsG0280010391.01.T01:CDS 25.0%
! TCATACATCAAGAACAAATA+AGG + Chr2:68965984-68966003 None:intergenic 25.0%
! TCATCAAGAAGAATTATCAT+TGG + Chr2:68964660-68964679 None:intergenic 25.0%
! TGATAACATTGTGTGTTAAA+TGG - Chr2:68962711-68962730 MsG0280010391.01.T01:three_prime_UTR 25.0%
! TTAACACACAATGTTATCAA+CGG + Chr2:68962710-68962729 None:intergenic 25.0%
! TTTACAGAATCTATACTTGA+AGG + Chr2:68964003-68964022 None:intergenic 25.0%
! TTTCTTCAACATAACAAAAG+AGG + Chr2:68965143-68965162 None:intergenic 25.0%
!! AAACTTTTGTTCATTTTGAG+GGG - Chr2:68962530-68962549 MsG0280010391.01.T01:intron 25.0%
!! ACTTCTTGATTGTTATTACA+TGG - Chr2:68963113-68963132 MsG0280010391.01.T01:three_prime_UTR 25.0%
!! ACTTTTATGTTTATGTCATC+AGG - Chr2:68963800-68963819 MsG0280010391.01.T01:CDS 25.0%
!! AGAAACTTTTGTTCATTTTG+AGG - Chr2:68962528-68962547 MsG0280010391.01.T01:intron 25.0%
!! AGTTCAAGTAATGATCTTTT+AGG + Chr2:68963778-68963797 None:intergenic 25.0%
!! ATGCAAATGATTTTGTGTTA+AGG + Chr2:68962976-68962995 None:intergenic 25.0%
!! ATTTCTCATATTTTGTCTCT+CGG + Chr2:68966079-68966098 None:intergenic 25.0%
!! CATTTGAGATGATTAAATGA+TGG - Chr2:68967063-68967082 MsG0280010391.01.T01:intron 25.0%
!! GAAACTTTTGTTCATTTTGA+GGG - Chr2:68962529-68962548 MsG0280010391.01.T01:intron 25.0%
!! GAAATTTTTAACAGATGATG+TGG - Chr2:68965943-68965962 MsG0280010391.01.T01:intron 25.0%
!! TTGAATTTGATGACAAGTAT+TGG - Chr2:68962586-68962605 MsG0280010391.01.T01:intron 25.0%
!! TTGTTTCCAATTTGTTTACT+TGG + Chr2:68964452-68964471 None:intergenic 25.0%
!!! ATCATAAACTGTTTTAATGG+GGG + Chr2:68965862-68965881 None:intergenic 25.0%
!!! CAATGTTTTAAAAACTCAAC+CGG - Chr2:68963595-68963614 MsG0280010391.01.T01:intron 25.0%
!!! CTTGAAAGTATTGATGATTA+TGG - Chr2:68963348-68963367 MsG0280010391.01.T01:intron 25.0%
!!! CTTTTGTTATGTTGAAGAAA+TGG - Chr2:68965143-68965162 MsG0280010391.01.T01:intron 25.0%
AAACACTAAGTCCAAGAAAA+TGG - Chr2:68963148-68963167 MsG0280010391.01.T01:exon 30.0%
ATATTCTTGCAGTTTATGCT+TGG - Chr2:68964266-68964285 MsG0280010391.01.T01:intron 30.0%
ATGATGCATTTACTCAAGAA+GGG - Chr2:68963172-68963191 MsG0280010391.01.T01:CDS 30.0%
ATGTTAACTCTCCATCAAAT+AGG - Chr2:68964063-68964082 MsG0280010391.01.T01:intron 30.0%
ATTTCTTTCAGGCATAATCA+TGG + Chr2:68963938-68963957 None:intergenic 30.0%
CATATATAGACACATAAGAG+AGG + Chr2:68965752-68965771 None:intergenic 30.0%
CCAAAACTCCATAAACATAT+AGG - Chr2:68964943-68964962 MsG0280010391.01.T01:intron 30.0%
CTGTCAATGTTATACCTTAT+AGG - Chr2:68967101-68967120 MsG0280010391.01.T01:intron 30.0%
CTTCATTATTGTCTCCTATA+AGG + Chr2:68967118-68967137 None:intergenic 30.0%
GAAGTGTATTATTGGATTGA+TGG - Chr2:68962251-68962270 MsG0280010391.01.T01:intron 30.0%
GAGAGACAAAATATGAGAAA+TGG - Chr2:68966078-68966097 MsG0280010391.01.T01:CDS 30.0%
GTAAAACTATCTGTTGAGTA+TGG + Chr2:68965777-68965796 None:intergenic 30.0%
TAGGTACAATGAATCACAAA+AGG + Chr2:68965276-68965295 None:intergenic 30.0%
TAGTACATAACAATGAAGCA+CGG + Chr2:68962399-68962418 None:intergenic 30.0%
TATAAACTGTTGTTGGGTAT+AGG - Chr2:68962229-68962248 MsG0280010391.01.T01:three_prime_UTR 30.0%
TCACCGTAATATAAATCACA+TGG - Chr2:68964136-68964155 MsG0280010391.01.T01:intron 30.0%
TGGTGATATAAACTGTTGTT+GGG - Chr2:68962223-68962242 MsG0280010391.01.T01:three_prime_UTR 30.0%
TTATGCACATAATACGTTTC+AGG - Chr2:68964172-68964191 MsG0280010391.01.T01:intron 30.0%
TTCTCGATATATCAATCTAG+TGG + Chr2:68964490-68964509 None:intergenic 30.0%
TTGATCTTGAATCTTGAGAT+GGG + Chr2:68962143-68962162 None:intergenic 30.0%
TTGTGATTCATTGTACCTAT+GGG - Chr2:68965277-68965296 MsG0280010391.01.T01:CDS 30.0%
TTTCTTTCAGGCATAATCAT+GGG + Chr2:68963937-68963956 None:intergenic 30.0%
TTTGTGATTCATTGTACCTA+TGG - Chr2:68965276-68965295 MsG0280010391.01.T01:CDS 30.0%
! AAGCAATAAGTTGGCAAAAA+TGG + Chr2:68966821-68966840 None:intergenic 30.0%
! AAGTTTTACATCGTACCATA+TGG + Chr2:68966948-68966967 None:intergenic 30.0%
! ACAATTTTTACCTGCTCTTT+TGG + Chr2:68967262-68967281 None:intergenic 30.0%
! AGTCAATCAAATTTAGAGTG+TGG - Chr2:68967136-68967155 MsG0280010391.01.T01:CDS 30.0%
! CCTATATGTTTATGGAGTTT+TGG + Chr2:68964946-68964965 None:intergenic 30.0%
! CGAATTTTCTAACTCGATTT+GGG - Chr2:68965012-68965031 MsG0280010391.01.T01:CDS 30.0%
! GAAAATTGATGTTCCCTTTT+TGG - Chr2:68966291-68966310 MsG0280010391.01.T01:intron 30.0%
! GAAGTTTGGGAATTTTTACT+TGG - Chr2:68963487-68963506 MsG0280010391.01.T01:intron 30.0%
! TCGAATTTTCTAACTCGATT+TGG - Chr2:68965011-68965030 MsG0280010391.01.T01:CDS 30.0%
! TGGTTTGCAGAATTGATTAA+AGG - Chr2:68967156-68967175 MsG0280010391.01.T01:CDS 30.0%
! TTAGGTCTAGAATTCAGAAA+TGG + Chr2:68963760-68963779 None:intergenic 30.0%
! TTGGTGATATAAACTGTTGT+TGG - Chr2:68962222-68962241 MsG0280010391.01.T01:three_prime_UTR 30.0%
! TTTCAGATAGTTGATATGTG+AGG - Chr2:68962563-68962582 MsG0280010391.01.T01:intron 30.0%
!! ACATAGCTTGTTAACCAAAA+AGG + Chr2:68966308-68966327 None:intergenic 30.0%
!! AGTACTGATCTATTTCAAAG+AGG + Chr2:68964331-68964350 None:intergenic 30.0%
!! AGTTGACAAGTTTTTGTTTC+TGG - Chr2:68961919-68961938 MsG0280010391.01.T01:three_prime_UTR 30.0%
!! CATAGCTTGTTAACCAAAAA+GGG + Chr2:68966307-68966326 None:intergenic 30.0%
!! GTGACTATGTATTTGCTTTT+CGG - Chr2:68965219-68965238 MsG0280010391.01.T01:CDS 30.0%
!! GTTGACAAGTTTTTGTTTCT+GGG - Chr2:68961920-68961939 MsG0280010391.01.T01:three_prime_UTR 30.0%
!! TTTTGGAGAACAGAACATAT+TGG - Chr2:68965191-68965210 MsG0280010391.01.T01:intron 30.0%
AACAATTCACGATTCTGAAC+AGG - Chr2:68964615-68964634 MsG0280010391.01.T01:intron 35.0%
AAGCTTAGAGACATTGCAAA+TGG + Chr2:68964587-68964606 None:intergenic 35.0%
AAGTTGGCAAAAATGGCATA+TGG + Chr2:68966814-68966833 None:intergenic 35.0%
ACTTGTCAACTCAAAGAGAA+TGG + Chr2:68961910-68961929 None:intergenic 35.0%
AGAACGCAAATTGCAAACAA+TGG - Chr2:68965473-68965492 MsG0280010391.01.T01:intron 35.0%
AGGAAAACAGATATAGGAAG+AGG + Chr2:68966123-68966142 None:intergenic 35.0%
ATAATCATGGGGTCTTGAAT+TGG + Chr2:68963925-68963944 None:intergenic 35.0%
ATACAGATCTATGTGACGAA+TGG + Chr2:68966754-68966773 None:intergenic 35.0%
ATATAAGAGCAAATACCCCT+CGG + Chr2:68963233-68963252 None:intergenic 35.0%
ATATCTGAATCCTAGCTTGA+TGG - Chr2:68963285-68963304 MsG0280010391.01.T01:CDS 35.0%
ATCAATTAGGGGAGAAGTTT+GGG - Chr2:68963474-68963493 MsG0280010391.01.T01:intron 35.0%
ATCACATGTATCAACGTAGT+TGG + Chr2:68964372-68964391 None:intergenic 35.0%
CAACTATTCGGTTATTTGAG+TGG + Chr2:68963688-68963707 None:intergenic 35.0%
CACAAACACAAGAAGAAACA+AGG + Chr2:68962010-68962029 None:intergenic 35.0%
CAGATATTGAATGACACAAC+AGG - Chr2:68966493-68966512 MsG0280010391.01.T01:intron 35.0%
CATCTCAAGATTCAAGATCA+AGG - Chr2:68962142-68962161 MsG0280010391.01.T01:three_prime_UTR 35.0%
CATGATGCATTTACTCAAGA+AGG - Chr2:68963171-68963190 MsG0280010391.01.T01:CDS 35.0%
CTAGACTTTCAATCTCACAA+TGG - Chr2:68963019-68963038 MsG0280010391.01.T01:intron 35.0%
CTTGATCTTGAATCTTGAGA+TGG + Chr2:68962144-68962163 None:intergenic 35.0%
CTTGTCAACTCAAAGAGAAT+GGG + Chr2:68961909-68961928 None:intergenic 35.0%
CTTTCGTCAAATGTACTCTT+CGG + Chr2:68963523-68963542 None:intergenic 35.0%
CTTTGCTAAGTTGTCAGTAA+TGG - Chr2:68962743-68962762 MsG0280010391.01.T01:three_prime_UTR 35.0%
GAAGGCCTATTATTATCTTG+AGG + Chr2:68963985-68964004 None:intergenic 35.0%
GAGAATACGAAGATTGTACA+AGG + Chr2:68966603-68966622 None:intergenic 35.0%
GCAACAAGGAAAACAGATAT+AGG + Chr2:68966129-68966148 None:intergenic 35.0%
GCTTGGATAGATAAAGAAGT+TGG - Chr2:68964283-68964302 MsG0280010391.01.T01:intron 35.0%
GTTTAACTGGTTGAACTGTA+TGG - Chr2:68963724-68963743 MsG0280010391.01.T01:intron 35.0%
TCACCTGTAATTACTGATGA+TGG - Chr2:68963895-68963914 MsG0280010391.01.T01:intron 35.0%
TCATCCATTCATGTCATTGA+GGG - Chr2:68967351-68967370 MsG0280010391.01.T01:five_prime_UTR 35.0%
TCTTTCAGTTTCTTGTGATG+TGG - Chr2:68962054-68962073 MsG0280010391.01.T01:three_prime_UTR 35.0%
TTCCAACAAGAGGAAACAAT+TGG + Chr2:68963858-68963877 None:intergenic 35.0%
TTCTTTCAGGCATAATCATG+GGG + Chr2:68963936-68963955 None:intergenic 35.0%
TTGCAAGGTTGCAAGAAAAA+TGG + Chr2:68964541-68964560 None:intergenic 35.0%
TTTCGTCAAATGTACTCTTC+GGG + Chr2:68963522-68963541 None:intergenic 35.0%
TTTCTCAGTAGTTAGCCATA+TGG - Chr2:68966930-68966949 MsG0280010391.01.T01:intron 35.0%
! ATATCTGTTTTCCTTGTTGC+TGG - Chr2:68966129-68966148 MsG0280010391.01.T01:intron 35.0%
! CTTGTGCACTATTTTGTAGT+AGG - Chr2:68964102-68964121 MsG0280010391.01.T01:intron 35.0%
! GAATTTAATGGGTGGAAACT+TGG + Chr2:68967184-68967203 None:intergenic 35.0%
! GGGTATAGGAAGTGTATTAT+TGG - Chr2:68962243-68962262 MsG0280010391.01.T01:intron 35.0%
! GTATCCATCATGGTGTTTTA+TGG - Chr2:68962659-68962678 MsG0280010391.01.T01:intron 35.0%
! GTCTAGAATTCAGAAATGGT+GGG + Chr2:68963756-68963775 None:intergenic 35.0%
! TGATTGTTATTACATGGCTC+AGG - Chr2:68963119-68963138 MsG0280010391.01.T01:three_prime_UTR 35.0%
! TTTTTACCTGCTCTTTTGGA+TGG + Chr2:68967258-68967277 None:intergenic 35.0%
!! ATTGTGTGTTAAATGGGTTG+TGG - Chr2:68962718-68962737 MsG0280010391.01.T01:three_prime_UTR 35.0%
!! ATTTACTCAAGAAGGGTATC+TGG - Chr2:68963179-68963198 MsG0280010391.01.T01:CDS 35.0%
!! ATTTGCTTTTCGGATGCTTA+TGG - Chr2:68965229-68965248 MsG0280010391.01.T01:CDS 35.0%
!! GAGCTTGTTAAGTTGATAAC+AGG - Chr2:68962504-68962523 MsG0280010391.01.T01:intron 35.0%
!!! AATGCATCATGCCATTTTCT+TGG + Chr2:68963162-68963181 None:intergenic 35.0%
!!! ATTTTCTAACTCGATTTGGG+TGG - Chr2:68965015-68965034 MsG0280010391.01.T01:CDS 35.0%
!!! GGATTTTTTGACAATCTCCA+TGG - Chr2:68962616-68962635 MsG0280010391.01.T01:intron 35.0%
!!! GTTGTCAGTAATGGTTTTGT+TGG - Chr2:68962752-68962771 MsG0280010391.01.T01:three_prime_UTR 35.0%
AAAGAAGTTGGATACGGTCA+AGG - Chr2:68964295-68964314 MsG0280010391.01.T01:intron 40.0%
AAAGAATCAGCTGAAACTCC+TGG + Chr2:68962086-68962105 None:intergenic 40.0%
AAATGGAAGCTGACTACCTT+CGG + Chr2:68963564-68963583 None:intergenic 40.0%
AACATACAACAGTTCCCTCA+GGG + Chr2:68967206-68967225 None:intergenic 40.0%
AACCGAATAGTTGACAGCAT+CGG - Chr2:68963695-68963714 MsG0280010391.01.T01:intron 40.0%
AACCGATGCTGTCAACTATT+CGG + Chr2:68963700-68963719 None:intergenic 40.0%
ACACACAATGTTATCAACGG+AGG + Chr2:68962707-68962726 None:intergenic 40.0%
ACTGGTTGAACTGTATGGTT+CGG - Chr2:68963729-68963748 MsG0280010391.01.T01:intron 40.0%
AGAACAGAACATATTGGTGG+AGG - Chr2:68965197-68965216 MsG0280010391.01.T01:CDS 40.0%
AGCAAAGTCAATACGACAAG+TGG - Chr2:68966048-68966067 MsG0280010391.01.T01:CDS 40.0%
AGTTCCCTCAGGGAATTTAA+TGG + Chr2:68967196-68967215 None:intergenic 40.0%
ATAGACACATAAGAGAGGCA+AGG + Chr2:68965747-68965766 None:intergenic 40.0%
ATCAAATAAGAGAACGCCGA+AGG - Chr2:68963545-68963564 MsG0280010391.01.T01:intron 40.0%
ATCAACACTGCACACCTAAA+AGG + Chr2:68962342-68962361 None:intergenic 40.0%
ATCAGCTTCTGTAAAAGCTG+AGG - Chr2:68966013-68966032 MsG0280010391.01.T01:intron 40.0%
ATCATTACTGCAATCTGGTC+TGG + Chr2:68962117-68962136 None:intergenic 40.0%
CAAAAATACTCCATGAAGCG+AGG - Chr2:68966171-68966190 MsG0280010391.01.T01:intron 40.0%
CAAACTTCTCCCCTAATTGA+TGG + Chr2:68963475-68963494 None:intergenic 40.0%
CAGACAAGAAACTAATCCAG+TGG - Chr2:68964040-68964059 MsG0280010391.01.T01:CDS 40.0%
CAGGAATCTAGATGCCAAAA+AGG - Chr2:68966512-68966531 MsG0280010391.01.T01:intron 40.0%
CATAGTTCAACCACTCAAAC+CGG - Chr2:68963644-68963663 MsG0280010391.01.T01:intron 40.0%
CATCAATTAGGGGAGAAGTT+TGG - Chr2:68963473-68963492 MsG0280010391.01.T01:intron 40.0%
CCTAAAAGGCTTTCAATCAG+AGG + Chr2:68962328-68962347 None:intergenic 40.0%
CCTGAAAGAAATCCAGACAA+GGG - Chr2:68963946-68963965 MsG0280010391.01.T01:intron 40.0%
CGAGGAAATTTCAGATGTAC+TGG - Chr2:68964859-68964878 MsG0280010391.01.T01:intron 40.0%
GAGACATTGCAAATGGTGTT+TGG + Chr2:68964580-68964599 None:intergenic 40.0%
GATAGTGTTAGAACACCAAC+TGG - Chr2:68965434-68965453 MsG0280010391.01.T01:CDS 40.0%
GATCGTTTGCTTACACAGTT+CGG - Chr2:68965501-68965520 MsG0280010391.01.T01:intron 40.0%
GATTGTCAAAAAATCCGCCA+TGG + Chr2:68962612-68962631 None:intergenic 40.0%
GGAACATCATTACTGCAATC+TGG + Chr2:68962122-68962141 None:intergenic 40.0%
GGAGGCTCAACTAAGTAATT+TGG - Chr2:68964897-68964916 MsG0280010391.01.T01:intron 40.0%
GTCATCCATTCATGTCATTG+AGG - Chr2:68967350-68967369 MsG0280010391.01.T01:five_prime_UTR 40.0%
GTTCCCTCAGGGAATTTAAT+GGG + Chr2:68967195-68967214 None:intergenic 40.0%
GTTTGACTGTTGTTCTGTTC+CGG + Chr2:68963666-68963685 None:intergenic 40.0%
TAACATACAACAGTTCCCTC+AGG + Chr2:68967207-68967226 None:intergenic 40.0%
TAGACACATAAGAGAGGCAA+GGG + Chr2:68965746-68965765 None:intergenic 40.0%
TAGCTGTTCTATAGTCGTAG+AGG + Chr2:68965540-68965559 None:intergenic 40.0%
TCAGCTTCTGTAAAAGCTGA+GGG - Chr2:68966014-68966033 MsG0280010391.01.T01:intron 40.0%
TCAGGATGCAATATGCTACA+TGG - Chr2:68963818-68963837 MsG0280010391.01.T01:CDS 40.0%
TCCACCATAAAACACCATGA+TGG + Chr2:68962666-68962685 None:intergenic 40.0%
TGATTCATTGTACCTATGGG+AGG - Chr2:68965280-68965299 MsG0280010391.01.T01:CDS 40.0%
TGCAACCTTGCAACAAACAA+TGG - Chr2:68964548-68964567 MsG0280010391.01.T01:intron 40.0%
TGGAGAACAGAACATATTGG+TGG - Chr2:68965194-68965213 MsG0280010391.01.T01:CDS 40.0%
TGGCCATCATCAGTAATTAC+AGG + Chr2:68963901-68963920 None:intergenic 40.0%
TTGACCCTCAATGACATGAA+TGG + Chr2:68967358-68967377 None:intergenic 40.0%
TTGTTTCCTCTTGTTGGAAG+TGG - Chr2:68963859-68963878 MsG0280010391.01.T01:CDS 40.0%
! ACTTGCCATTGTTTGTTGCA+AGG + Chr2:68964556-68964575 None:intergenic 40.0%
! ATGATGAAGCAGACGCATTT+TGG - Chr2:68964676-68964695 MsG0280010391.01.T01:intron 40.0%
! CCTCTGATTGAAAGCCTTTT+AGG - Chr2:68962325-68962344 MsG0280010391.01.T01:intron 40.0%
! GAATTATCATTGGGGAGCAT+AGG + Chr2:68964650-68964669 None:intergenic 40.0%
! GATGTTGTCAAGGTTAGTCA+GGG - Chr2:68966201-68966220 MsG0280010391.01.T01:intron 40.0%
! GGTCTAGAATTCAGAAATGG+TGG + Chr2:68963757-68963776 None:intergenic 40.0%
! TCAATGGATATGTTGGTGCT+AGG + Chr2:68967031-68967050 None:intergenic 40.0%
! TCCATCATGGTGTTTTATGG+TGG - Chr2:68962662-68962681 MsG0280010391.01.T01:intron 40.0%
! TGATGTTGTCAAGGTTAGTC+AGG - Chr2:68966200-68966219 MsG0280010391.01.T01:intron 40.0%
! TTTCATTTTCCGCTACCAGT+TGG + Chr2:68965452-68965471 None:intergenic 40.0%
!! CAAGAAGGGTATCTGGATAT+AGG - Chr2:68963186-68963205 MsG0280010391.01.T01:CDS 40.0%
!! GTTCTTGAACTTTTCAAGCG+AGG - Chr2:68964841-68964860 MsG0280010391.01.T01:intron 40.0%
!! TTGATGACAAGTATTGGCCA+TGG - Chr2:68962592-68962611 MsG0280010391.01.T01:intron 40.0%
AAGTTGGATACGGTCAAGGT+GGG - Chr2:68964299-68964318 MsG0280010391.01.T01:intron 45.0%
AATCGACCACTTCCAACAAG+AGG + Chr2:68963868-68963887 None:intergenic 45.0%
ACGGACACAAACATGAACAC+CGG + Chr2:68962380-68962399 None:intergenic 45.0%
AGACACATAAGAGAGGCAAG+GGG + Chr2:68965745-68965764 None:intergenic 45.0%
AGGCTTGGATGATGTTGTCA+AGG - Chr2:68966191-68966210 MsG0280010391.01.T01:intron 45.0%
AGGGAGTCCATCCATCAATT+AGG - Chr2:68963461-68963480 MsG0280010391.01.T01:intron 45.0%
AGTACAGCTAATCCCTTGTC+TGG + Chr2:68963961-68963980 None:intergenic 45.0%
ATGTTATCAACGGAGGATCG+CGG + Chr2:68962700-68962719 None:intergenic 45.0%
CAATAACCGCAAGATGTCAG+AGG + Chr2:68966469-68966488 None:intergenic 45.0%
CATCCTTCACAAATTGGCCA+TGG + Chr2:68962636-68962655 None:intergenic 45.0%
CATGGCCAATTTGTGAAGGA+TGG - Chr2:68962634-68962653 MsG0280010391.01.T01:intron 45.0%
CATTGAACTGACAAGACCTG+TGG - Chr2:68963619-68963638 MsG0280010391.01.T01:intron 45.0%
CCACCCATTAAATTCCCTGA+GGG - Chr2:68967189-68967208 MsG0280010391.01.T01:exon 45.0%
CCCTTGTCTGGATTTCTTTC+AGG + Chr2:68963949-68963968 None:intergenic 45.0%
CGCCAATTGTTTCCTCTTGT+TGG - Chr2:68963853-68963872 MsG0280010391.01.T01:CDS 45.0%
CTTCTCCCCTAATTGATGGA+TGG + Chr2:68963471-68963490 None:intergenic 45.0%
GATGGAGAGTTAACATCCAC+TGG + Chr2:68964059-68964078 None:intergenic 45.0%
GCCTGAAAGAAATCCAGACA+AGG - Chr2:68963945-68963964 MsG0280010391.01.T01:intron 45.0%
GGAGTCCATCCATCAATTAG+GGG - Chr2:68963463-68963482 MsG0280010391.01.T01:intron 45.0%
GGGAGTCCATCCATCAATTA+GGG - Chr2:68963462-68963481 MsG0280010391.01.T01:intron 45.0%
GTGTATCCATCCAAAAGAGC+AGG - Chr2:68967249-68967268 MsG0280010391.01.T01:five_prime_UTR 45.0%
GTTAGAACACCAACTGGTAG+CGG - Chr2:68965440-68965459 MsG0280010391.01.T01:intron 45.0%
TACCGCCATCCTTCACAAAT+TGG + Chr2:68962642-68962661 None:intergenic 45.0%
TCATGGGGTCTTGAATTGGT+TGG + Chr2:68963921-68963940 None:intergenic 45.0%
TCCACCCATTAAATTCCCTG+AGG - Chr2:68967188-68967207 MsG0280010391.01.T01:CDS 45.0%
TCTCCATGGCCAATTTGTGA+AGG - Chr2:68962630-68962649 MsG0280010391.01.T01:intron 45.0%
TCTTAGGCCTGACTGTTTGT+CGG + Chr2:68965683-68965702 None:intergenic 45.0%
TCTTCAACACACCAGCAACA+AGG + Chr2:68966143-68966162 None:intergenic 45.0%
TGATGTGTATGTGTCGTGTC+CGG - Chr2:68962358-68962377 MsG0280010391.01.T01:intron 45.0%
TGTTATTACATGGCTCAGGC+TGG - Chr2:68963123-68963142 MsG0280010391.01.T01:three_prime_UTR 45.0%
! ATACGTTTCAGGTCTTGACG+TGG - Chr2:68964183-68964202 MsG0280010391.01.T01:intron 45.0%
! GACAGGTTTTCCATCAAGCT+AGG + Chr2:68963298-68963317 None:intergenic 45.0%
! GGTCTTGTCAGTTCAATGTC+CGG + Chr2:68963617-68963636 None:intergenic 45.0%
! GTCGTAGAGGTATGCACAAT+CGG + Chr2:68965527-68965546 None:intergenic 45.0%
! TAATTGATGGATGGACTCCC+TGG + Chr2:68963462-68963481 None:intergenic 45.0%
! TTGTTCTGTTCCGGTTTGAG+TGG + Chr2:68963657-68963676 None:intergenic 45.0%
!! ATGACAAGTATTGGCCATGG+CGG - Chr2:68962595-68962614 MsG0280010391.01.T01:intron 45.0%
!! ATGTTGGTGCTAGGCTTTCT+TGG + Chr2:68967022-68967041 None:intergenic 45.0%
!! TAGTTGACAGCATCGGTTCA+CGG - Chr2:68963702-68963721 MsG0280010391.01.T01:intron 45.0%
!! TGGCGATGCTACTTTGTTGA+GGG - Chr2:68962772-68962791 MsG0280010391.01.T01:intron 45.0%
!! TTGGCGATGCTACTTTGTTG+AGG - Chr2:68962771-68962790 MsG0280010391.01.T01:intron 45.0%
!!! TTTTTTATTTTTCTTAATTT+TGG - Chr2:68963050-68963069 MsG0280010391.01.T01:intron 5.0%
ACCGCAAGATGTCAGAGGAA+CGG + Chr2:68966464-68966483 None:intergenic 50.0%
ATACTCCATGAAGCGAGGCT+TGG - Chr2:68966176-68966195 MsG0280010391.01.T01:intron 50.0%
ATCATCCAAGCCTCGCTTCA+TGG + Chr2:68966184-68966203 None:intergenic 50.0%
CCCTCAGGGAATTTAATGGG+TGG + Chr2:68967192-68967211 None:intergenic 50.0%
CTTAGGCCTGACTGTTTGTC+GGG + Chr2:68965682-68965701 None:intergenic 50.0%
CTTGTGATGTGGAGAGATCC+AGG - Chr2:68962065-68962084 MsG0280010391.01.T01:three_prime_UTR 50.0%
GAAGTTGGATACGGTCAAGG+TGG - Chr2:68964298-68964317 MsG0280010391.01.T01:intron 50.0%
GGCCAATTTGTGAAGGATGG+CGG - Chr2:68962637-68962656 MsG0280010391.01.T01:intron 50.0%
GTGGTTGAACTATGAGCCAC+AGG + Chr2:68963638-68963657 None:intergenic 50.0%
TCCGTTCCTCTGACATCTTG+CGG - Chr2:68966460-68966479 MsG0280010391.01.T01:intron 50.0%
TGCCAAAAAGGCTTGCGTTG+AGG - Chr2:68966524-68966543 MsG0280010391.01.T01:intron 50.0%
TTAGGCCTGACTGTTTGTCG+GGG + Chr2:68965681-68965700 None:intergenic 50.0%
! AAGGATGGCGGTATCCATCA+TGG - Chr2:68962649-68962668 MsG0280010391.01.T01:intron 50.0%
! AGATGTACTGGTCGCACTCT+TGG - Chr2:68964871-68964890 MsG0280010391.01.T01:intron 50.0%
! AGCCTCAACGCAAGCCTTTT+TGG + Chr2:68966529-68966548 None:intergenic 50.0%
! ATGTACTGGTCGCACTCTTG+GGG - Chr2:68964873-68964892 MsG0280010391.01.T01:intron 50.0%
! GATGTACTGGTCGCACTCTT+GGG - Chr2:68964872-68964891 MsG0280010391.01.T01:intron 50.0%
! GGTACGCACTGATAGGACAT+TGG - Chr2:68964204-68964223 MsG0280010391.01.T01:intron 50.0%
! GTTGTCAAGGTTAGTCAGGG+AGG - Chr2:68966204-68966223 MsG0280010391.01.T01:intron 50.0%
! TCTGAGACGAATCTACCGAG+GGG - Chr2:68963215-68963234 MsG0280010391.01.T01:CDS 50.0%
! TTGACGTGGTACGCACTGAT+AGG - Chr2:68964197-68964216 MsG0280010391.01.T01:intron 50.0%
!! ACTCTGAGACGAATCTACCG+AGG - Chr2:68963213-68963232 MsG0280010391.01.T01:CDS 50.0%
!! CTCTGAGACGAATCTACCGA+GGG - Chr2:68963214-68963233 MsG0280010391.01.T01:CDS 50.0%
!! GCATCGGTTCACGGTTTAAC+TGG - Chr2:68963711-68963730 MsG0280010391.01.T01:intron 50.0%
!! GTAAAAGCTGAGGGCGTCAA+AGG - Chr2:68966023-68966042 MsG0280010391.01.T01:intron 50.0%
AAGCCAGACACACCTCCCAT+AGG + Chr2:68965295-68965314 None:intergenic 55.0%
AATACCCCTGAACCGTACCG+CGG - Chr2:68965640-68965659 MsG0280010391.01.T01:intron 55.0%
ACATAAGAGAGGCAAGGGGC+GGG + Chr2:68965741-68965760 None:intergenic 55.0%
CACATAAGAGAGGCAAGGGG+CGG + Chr2:68965742-68965761 None:intergenic 55.0%
CAGTCAGGCCTAAGACACCA+AGG - Chr2:68965688-68965707 MsG0280010391.01.T01:intron 55.0%
TAGGCCTGACTGTTTGTCGG+GGG + Chr2:68965680-68965699 None:intergenic 55.0%
TGAGCTAGCAAAGCTCCCTC+CGG + Chr2:68965714-68965733 None:intergenic 55.0%
! GTACCTATGGGAGGTGTGTC+TGG - Chr2:68965289-68965308 MsG0280010391.01.T01:CDS 55.0%
ATACCCCTGAACCGTACCGC+GGG - Chr2:68965641-68965660 MsG0280010391.01.T01:intron 60.0%
CAGGCCTAAGACACCAAGGC+CGG - Chr2:68965692-68965711 MsG0280010391.01.T01:intron 60.0%
CATAAGAGAGGCAAGGGGCG+GGG + Chr2:68965740-68965759 None:intergenic 60.0%
CCTAAGACACCAAGGCCGGA+GGG - Chr2:68965696-68965715 MsG0280010391.01.T01:intron 60.0%
CCTGACTGTTTGTCGGGGGA+GGG + Chr2:68965676-68965695 None:intergenic 60.0%
CTGACTGTTTGTCGGGGGAG+GGG + Chr2:68965675-68965694 None:intergenic 60.0%
TACTGGTCGCACTCTTGGGG+TGG - Chr2:68964876-68964895 MsG0280010391.01.T01:intron 60.0%
TGACTGTTTGTCGGGGGAGG+GGG + Chr2:68965674-68965693 None:intergenic 60.0%
AGCAAAGCTCCCTCCGGCCT+TGG + Chr2:68965708-68965727 None:intergenic 65.0%
ATCCCCCGCGGTACGGTTCA+GGG + Chr2:68965648-68965667 None:intergenic 65.0%
CCCTCCCCCGACAAACAGTC+AGG - Chr2:68965673-68965692 MsG0280010391.01.T01:intron 65.0%
GACTGTTTGTCGGGGGAGGG+GGG + Chr2:68965673-68965692 None:intergenic 65.0%
GCCTAAGACACCAAGGCCGG+AGG - Chr2:68965695-68965714 MsG0280010391.01.T01:intron 65.0%
GCCTGACTGTTTGTCGGGGG+AGG + Chr2:68965677-68965696 None:intergenic 65.0%
TACCCCTGAACCGTACCGCG+GGG - Chr2:68965642-68965661 MsG0280010391.01.T01:intron 65.0%
TATCCCCCGCGGTACGGTTC+AGG + Chr2:68965649-68965668 None:intergenic 65.0%
TGGTCGCACTCTTGGGGTGG+AGG - Chr2:68964879-68964898 MsG0280010391.01.T01:intron 65.0%
!! CCCTCCGGCCTTGGTGTCTT+AGG + Chr2:68965699-68965718 None:intergenic 65.0%
ACCCCTGAACCGTACCGCGG+GGG - Chr2:68965643-68965662 MsG0280010391.01.T01:intron 70.0%
GGGGGATATCCCCCGCGGTA+CGG + Chr2:68965655-68965674 None:intergenic 70.0%
TCCCCCGCGGTACGGTTCAG+GGG + Chr2:68965647-68965666 None:intergenic 70.0%
GGGAGGGGGGATATCCCCCG+CGG + Chr2:68965660-68965679 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr2 gene 68961887 68967391 68961887 ID=MsG0280010391.01;Name=MsG0280010391.01
Chr2 mRNA 68961887 68967391 68961887 ID=MsG0280010391.01.T01;Parent=MsG0280010391.01;Name=MsG0280010391.01.T01;_AED=0.30;_eAED=0.36;_QI=184|0.54|0.75|1|0.81|0.75|12|552|403
Chr2 exon 68961887 68962260 68961887 ID=MsG0280010391.01.T01:exon:9578;Parent=MsG0280010391.01.T01
Chr2 exon 68962702 68962782 68962702 ID=MsG0280010391.01.T01:exon:9577;Parent=MsG0280010391.01.T01
Chr2 exon 68963066 68963321 68963066 ID=MsG0280010391.01.T01:exon:9576;Parent=MsG0280010391.01.T01
Chr2 exon 68963784 68963882 68963784 ID=MsG0280010391.01.T01:exon:9575;Parent=MsG0280010391.01.T01
Chr2 exon 68963977 68964074 68963977 ID=MsG0280010391.01.T01:exon:9574;Parent=MsG0280010391.01.T01
Chr2 exon 68964314 68964415 68964314 ID=MsG0280010391.01.T01:exon:9573;Parent=MsG0280010391.01.T01
Chr2 exon 68964962 68965084 68964962 ID=MsG0280010391.01.T01:exon:9572;Parent=MsG0280010391.01.T01
Chr2 exon 68965194 68965456 68965194 ID=MsG0280010391.01.T01:exon:9571;Parent=MsG0280010391.01.T01
Chr2 exon 68965555 68965629 68965555 ID=MsG0280010391.01.T01:exon:9570;Parent=MsG0280010391.01.T01
Chr2 exon 68965712 68965815 68965712 ID=MsG0280010391.01.T01:exon:9569;Parent=MsG0280010391.01.T01
Chr2 exon 68966042 68966137 68966042 ID=MsG0280010391.01.T01:exon:9568;Parent=MsG0280010391.01.T01
Chr2 exon 68967115 68967391 68967115 ID=MsG0280010391.01.T01:exon:9567;Parent=MsG0280010391.01.T01
Chr2 five_prime_UTR 68967208 68967391 68967208 ID=MsG0280010391.01.T01:five_prime_utr;Parent=MsG0280010391.01.T01
Chr2 CDS 68967115 68967207 68967115 ID=MsG0280010391.01.T01:cds;Parent=MsG0280010391.01.T01
Chr2 CDS 68966042 68966137 68966042 ID=MsG0280010391.01.T01:cds;Parent=MsG0280010391.01.T01
Chr2 CDS 68965712 68965815 68965712 ID=MsG0280010391.01.T01:cds;Parent=MsG0280010391.01.T01
Chr2 CDS 68965555 68965629 68965555 ID=MsG0280010391.01.T01:cds;Parent=MsG0280010391.01.T01
Chr2 CDS 68965194 68965456 68965194 ID=MsG0280010391.01.T01:cds;Parent=MsG0280010391.01.T01
Chr2 CDS 68964962 68965084 68964962 ID=MsG0280010391.01.T01:cds;Parent=MsG0280010391.01.T01
Chr2 CDS 68964314 68964415 68964314 ID=MsG0280010391.01.T01:cds;Parent=MsG0280010391.01.T01
Chr2 CDS 68963977 68964074 68963977 ID=MsG0280010391.01.T01:cds;Parent=MsG0280010391.01.T01
Chr2 CDS 68963784 68963882 68963784 ID=MsG0280010391.01.T01:cds;Parent=MsG0280010391.01.T01
Chr2 CDS 68963163 68963321 68963163 ID=MsG0280010391.01.T01:cds;Parent=MsG0280010391.01.T01
Chr2 three_prime_UTR 68963066 68963162 68963066 ID=MsG0280010391.01.T01:three_prime_utr;Parent=MsG0280010391.01.T01
Chr2 three_prime_UTR 68962702 68962782 68962702 ID=MsG0280010391.01.T01:three_prime_utr;Parent=MsG0280010391.01.T01
Chr2 three_prime_UTR 68961887 68962260 68961887 ID=MsG0280010391.01.T01:three_prime_utr;Parent=MsG0280010391.01.T01
Gene Sequence

>MsG0280010391.01.T01

ATGTGGAGAGATCCAGGAGTTTCAGCTGATTCTTTCTATGAAACCAGACCAGATTGCAGTAATGATGTTCCCATCTCAAGATTCAAGATCAAGGCTGGTAAAACACTAAGTCCAAGAAAATGGCATGATGCATTTACTCAAGAAGGGTATCTGGATATAGGCAAGACTCTGAGACGAATCTACCGAGGGGGAGTCCATCCATCAATTAGGGGAGAAGTTTGGGAATTTTTACTTGGTTGCTATGACCCGAAGAGTACATTTGACGAAAGAGATCAAATAAGAGAACGCCGAAGTTCAACCACTCAAACCGGAACAGAACAACAGTCAAACCACTCAAATAACCGAATAGTTGACAGCATCGGTTCACGGATGCAATATGCTACATGGAAAGAAGAATGTCGCCAATTGTTTCCTCTTGTTGGAAGTGGTCGATTTATCACATCACCTGTAATTACTGATGATGGCCAACCAATTCAAGACCCCATGATTATGCCTGAAAGAAATCCAGACAAGGGATTAGCTGTACTTCCTCAAGATAATAATAGGCCTTCAAGTATAGATTCTGTAAATAATTTAGAAAATGTGACAGACAAGAAACTAATCCAGTGGATGTTAACTCTCCATCAAATAGGTCTTGACGTGGTACGCACTGATAGGACATTGGTTTTTTATGAGAAACAAGAAAACTTGTCAAAATTATGGGATATTCTTGCAGTTTATGCTTGGATAGATAAAGAAGTTGGATACGGTCAAGGAAATTTCAGATGTACTGGTCGCACTCTTGGGGTGGAGGCTCAACTAAGTAATTTGGCTTCAATTACTCAAGTAGTTGATCCAAAACTCCATAAACATATAGAACATATTGGTGGAGGTGACTATGTATTTGCTTTTCGGATGCTTATGGTTCTGTTTCGTCGAGAATTTTCCTTTTGTGATTCATTGTACCTATGGGAGATAGTTATTGATATAGTGTATAGCATCCGAATTAATGAGATAGTGTTAGAACACCAACTGGTAGCGGAAAATGAAAGAGAACGCAAATTGCAAACAATGATGATGTGGGCTCTAGAGTATGATCCTTATTTGTTCTTGATGTATGAAGAAGCTCAATCAGCTTCTGTAAAAGCTGAGGGCGTCAAAGGAAAGCAAAGTCAATACGACAAGTGGAAATACCGAGAGACAAAATATGAGAAATGGAGCAAAGAATGCTGA

Protein sequence

>MsG0280010391.01.T01

MWRDPGVSADSFYETRPDCSNDVPISRFKIKAGKTLSPRKWHDAFTQEGYLDIGKTLRRIYRGGVHPSIRGEVWEFLLGCYDPKSTFDERDQIRERRSSTTQTGTEQQSNHSNNRIVDSIGSRMQYATWKEECRQLFPLVGSGRFITSPVITDDGQPIQDPMIMPERNPDKGLAVLPQDNNRPSSIDSVNNLENVTDKKLIQWMLTLHQIGLDVVRTDRTLVFYEKQENLSKLWDILAVYAWIDKEVGYGQGNFRCTGRTLGVEAQLSNLASITQVVDPKLHKHIEHIGGGDYVFAFRMLMVLFRREFSFCDSLYLWEIVIDIVYSIRINEIVLEHQLVAENERERKLQTMMMWALEYDPYLFLMYEEAQSASVKAEGVKGKQSQYDKWKYRETKYEKWSKEC*