Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380012208.01.T01 | XP_039687781.1 | 93.678 | 174 | 11 | 0 | 1 | 174 | 1 | 174 | 2.64E-111 | 341 |
| MsG0380012208.01.T01 | XP_039687781.1 | 94.776 | 134 | 7 | 0 | 174 | 307 | 335 | 468 | 3.08E-79 | 259 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380012208.01.T01 | Q9ZWB4 | 41.52 | 171 | 97 | 3 | 6 | 174 | 9 | 178 | 5.01E-40 | 148 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380012208.01.T01 | A0A396IPG6 | 93.678 | 174 | 11 | 0 | 1 | 174 | 1 | 174 | 1.26e-111 | 341 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048773.01 | MsG0380012208.01 | 0.822518 | 2.268969e-53 | 1.903609e-50 |
| MsG0180000292.01 | MsG0380012208.01 | 0.818247 | 2.165286e-52 | 1.612195e-49 |
| MsG0180000354.01 | MsG0380012208.01 | 0.800735 | 1.253655e-48 | 5.881452e-46 |
| MsG0180000782.01 | MsG0380012208.01 | 0.805134 | 1.545999e-49 | 8.115552e-47 |
| MsG0180001085.01 | MsG0380012208.01 | 0.807378 | 5.203975e-50 | 2.894074e-47 |
| MsG0180002929.01 | MsG0380012208.01 | 0.854400 | 1.262101e-61 | 2.814978e-58 |
| MsG0180003741.01 | MsG0380012208.01 | 0.825854 | 3.735275e-54 | 3.445569e-51 |
| MsG0180003906.01 | MsG0380012208.01 | 0.804533 | 2.063617e-49 | 1.066583e-46 |
| MsG0180004051.01 | MsG0380012208.01 | 0.821849 | 3.244646e-53 | 2.670641e-50 |
| MsG0180004246.01 | MsG0380012208.01 | 0.808915 | 2.449433e-50 | 1.418098e-47 |
| MsG0180004735.01 | MsG0380012208.01 | 0.810351 | 1.203418e-50 | 7.237395e-48 |
| MsG0180005039.01 | MsG0380012208.01 | 0.834307 | 3.232477e-56 | 3.821261e-53 |
| MsG0180005113.01 | MsG0380012208.01 | 0.803819 | 2.905361e-49 | 1.474408e-46 |
| MsG0180005485.01 | MsG0380012208.01 | 0.838438 | 2.876341e-57 | 3.852633e-54 |
| MsG0180005750.01 | MsG0380012208.01 | 0.817838 | 2.679195e-52 | 1.972686e-49 |
| MsG0180005807.01 | MsG0380012208.01 | 0.815707 | 8.053906e-52 | 5.594068e-49 |
| MsG0180006136.01 | MsG0380012208.01 | 0.802809 | 4.703197e-49 | 2.325908e-46 |
| MsG0280010569.01 | MsG0380012208.01 | 0.828299 | 9.711921e-55 | 9.613842e-52 |
| MsG0280010611.01 | MsG0380012208.01 | 0.840398 | 8.906273e-58 | 1.267133e-54 |
| MsG0380012011.01 | MsG0380012208.01 | 0.806001 | 1.016646e-49 | 5.457244e-47 |
| MsG0380012208.01 | MsG0380014809.01 | 0.816067 | 6.694651e-52 | 4.695985e-49 |
| MsG0380012208.01 | MsG0380014926.01 | 0.807903 | 4.026924e-50 | 2.270102e-47 |
| MsG0380012208.01 | MsG0380015693.01 | 0.819220 | 1.301809e-52 | 9.957086e-50 |
| MsG0380012208.01 | MsG0380015896.01 | 0.815394 | 9.456072e-52 | 6.511520e-49 |
| MsG0380012208.01 | MsG0380016192.01 | 0.819239 | 1.289295e-52 | 9.866631e-50 |
| MsG0380012208.01 | MsG0380016764.01 | 0.810804 | 9.606298e-51 | 5.847409e-48 |
| MsG0380012208.01 | MsG0380017087.01 | 0.818061 | 2.385669e-52 | 1.767243e-49 |
| MsG0380012208.01 | MsG0380017336.01 | 0.810803 | 9.612582e-51 | 5.851066e-48 |
| MsG0380012208.01 | MsG0380017423.01 | 0.845708 | 3.431148e-59 | 5.768665e-56 |
| MsG0380012208.01 | MsG0380018037.01 | 0.810203 | 1.295615e-50 | 7.761317e-48 |
| MsG0380012208.01 | MsG0380018069.01 | 0.808061 | 3.727311e-50 | 2.110086e-47 |
| MsG0380012208.01 | MsG0480018644.01 | 0.804706 | 1.899429e-49 | 9.861503e-47 |
| MsG0380012208.01 | MsG0480020315.01 | 0.853714 | 1.991329e-61 | 4.342203e-58 |
| MsG0380012208.01 | MsG0480020517.01 | 0.824244 | 8.964574e-54 | 7.896300e-51 |
| MsG0380012208.01 | MsG0480020690.01 | 0.809529 | 1.809347e-50 | 1.064881e-47 |
| MsG0380012208.01 | MsG0480020783.01 | 0.802349 | 5.851528e-49 | 2.860005e-46 |
| MsG0380012208.01 | MsG0480020889.01 | 0.836077 | 1.156168e-56 | 1.441333e-53 |
| MsG0380012208.01 | MsG0480020890.01 | 0.809800 | 1.582261e-50 | 9.379760e-48 |
| MsG0380012208.01 | MsG0480021060.01 | 0.828944 | 6.783340e-55 | 6.841918e-52 |
| MsG0380012208.01 | MsG0480021894.01 | 0.861875 | 7.541128e-64 | 2.165270e-60 |
| MsG0380012208.01 | MsG0480022149.01 | 0.806426 | 8.273844e-50 | 4.489439e-47 |
| MsG0380012208.01 | MsG0480022355.01 | 0.802977 | 4.341714e-49 | 2.156114e-46 |
| MsG0380012208.01 | MsG0480022537.01 | 0.805171 | 1.518188e-49 | 7.977254e-47 |
| MsG0380012208.01 | MsG0480023314.01 | 0.811847 | 5.703867e-51 | 3.569047e-48 |
| MsG0380012208.01 | MsG0480023656.01 | 0.836036 | 1.184059e-56 | 1.474137e-53 |
| MsG0380012208.01 | MsG0480023845.01 | 0.815764 | 7.823219e-52 | 5.442401e-49 |
| MsG0380012208.01 | MsG0580024759.01 | 0.801808 | 7.561438e-49 | 3.644994e-46 |
| MsG0380012208.01 | MsG0580025366.01 | 0.810060 | 1.390823e-50 | 8.301138e-48 |
| MsG0380012208.01 | MsG0580025502.01 | 0.815918 | 7.227094e-52 | 5.048461e-49 |
| MsG0380012208.01 | MsG0580025607.01 | 0.836202 | 1.074414e-56 | 1.344689e-53 |
| MsG0380012208.01 | MsG0580025668.01 | 0.817644 | 2.963646e-52 | 2.170427e-49 |
| MsG0380012208.01 | MsG0580025828.01 | 0.853503 | 2.289100e-61 | 4.957183e-58 |
| MsG0380012208.01 | MsG0580027394.01 | 0.843059 | 1.768190e-58 | 2.733306e-55 |
| MsG0380012208.01 | MsG0580027655.01 | 0.821251 | 4.458947e-53 | 3.608648e-50 |
| MsG0380012208.01 | MsG0580027763.01 | 0.839255 | 1.767732e-57 | 2.427431e-54 |
| MsG0380012208.01 | MsG0580027826.01 | 0.800326 | 1.518582e-48 | 7.051187e-46 |
| MsG0380012208.01 | MsG0580029529.01 | 0.852349 | 4.892862e-61 | 1.019491e-57 |
| MsG0380012208.01 | MsG0680030627.01 | 0.800029 | 1.745425e-48 | 8.043193e-46 |
| MsG0380012208.01 | MsG0680030784.01 | 0.830909 | 2.251865e-55 | 2.405750e-52 |
| MsG0380012208.01 | MsG0680030908.01 | 0.845618 | 3.629630e-59 | 6.083394e-56 |
| MsG0380012208.01 | MsG0680032651.01 | 0.837922 | 3.904014e-57 | 5.147440e-54 |
| MsG0380012208.01 | MsG0680033377.01 | 0.811747 | 5.997832e-51 | 3.743081e-48 |
| MsG0380012208.01 | MsG0680035791.01 | 0.815061 | 1.121252e-51 | 7.650833e-49 |
| MsG0380012208.01 | MsG0780035992.01 | 0.821724 | 3.467491e-53 | 2.843775e-50 |
| MsG0380012208.01 | MsG0780036243.01 | 0.802709 | 4.933365e-49 | 2.433374e-46 |
| MsG0380012208.01 | MsG0780036307.01 | 0.804148 | 2.482958e-49 | 1.270716e-46 |
| MsG0380012208.01 | MsG0780036979.01 | 0.808001 | 3.837964e-50 | 2.169376e-47 |
| MsG0380012208.01 | MsG0780037341.01 | 0.836987 | 6.777947e-57 | 8.684213e-54 |
| MsG0380012208.01 | MsG0780037395.01 | 0.841698 | 4.059008e-58 | 6.012055e-55 |
| MsG0380012208.01 | MsG0780037808.01 | 0.807276 | 5.469563e-50 | 3.033758e-47 |
| MsG0380012208.01 | MsG0780038616.01 | 0.810481 | 1.128104e-50 | 6.807816e-48 |
| MsG0380012208.01 | MsG0780038784.01 | 0.846153 | 2.596934e-59 | 4.428503e-56 |
| MsG0380012208.01 | MsG0780038846.01 | 0.821138 | 4.734169e-53 | 3.819669e-50 |
| MsG0380012208.01 | MsG0780039186.01 | 0.848935 | 4.462737e-60 | 8.323548e-57 |
| MsG0380012208.01 | MsG0780039675.01 | 0.824075 | 9.824497e-54 | 8.612560e-51 |
| MsG0380012208.01 | MsG0780039746.01 | 0.806018 | 1.008585e-49 | 5.416103e-47 |
| MsG0380012208.01 | MsG0780039975.01 | 0.806528 | 7.875125e-50 | 4.284174e-47 |
| MsG0380012208.01 | MsG0780040278.01 | 0.808638 | 2.807001e-50 | 1.613299e-47 |
| MsG0380012208.01 | MsG0780040430.01 | 0.820683 | 6.026709e-53 | 4.800772e-50 |
| MsG0380012208.01 | MsG0780040431.01 | 0.826187 | 3.113146e-54 | 2.898792e-51 |
| MsG0380012208.01 | MsG0780041262.01 | 0.807395 | 5.161298e-50 | 2.871644e-47 |
| MsG0380012208.01 | MsG0880042890.01 | 0.807040 | 6.136798e-50 | 3.382949e-47 |
| MsG0380012208.01 | MsG0880043174.01 | 0.807877 | 4.077886e-50 | 2.297326e-47 |
| MsG0380012208.01 | MsG0880043814.01 | 0.800670 | 1.292490e-48 | 6.053782e-46 |
| MsG0380012208.01 | MsG0880044487.01 | 0.823139 | 1.626714e-53 | 1.388992e-50 |
| MsG0380012208.01 | MsG0880044538.01 | 0.808761 | 2.642269e-50 | 1.523546e-47 |
| MsG0380012208.01 | MsG0880045158.01 | 0.814278 | 1.671135e-51 | 1.116494e-48 |
| MsG0380012208.01 | MsG0880045558.01 | 0.810294 | 1.237880e-50 | 7.433323e-48 |
| MsG0380012208.01 | MsG0880045668.01 | 0.837476 | 5.081353e-57 | 6.608821e-54 |
| MsG0380012208.01 | MsG0880046054.01 | 0.823173 | 1.597507e-53 | 1.365250e-50 |
| MsG0380012208.01 | MsG0880046765.01 | 0.811210 | 7.843972e-51 | 4.826460e-48 |
| MsG0380012208.01 | MsG0880047394.01 | 0.818247 | 2.165611e-52 | 1.612419e-49 |
| MsG0280006996.01 | MsG0380012208.01 | 0.813567 | 2.397361e-51 | 1.571082e-48 |
| MsG0280007075.01 | MsG0380012208.01 | 0.832062 | 1.170837e-55 | 1.294255e-52 |
| MsG0280007502.01 | MsG0380012208.01 | 0.823913 | 1.072036e-53 | 9.355783e-51 |
| MsG0280007750.01 | MsG0380012208.01 | 0.823383 | 1.426726e-53 | 1.226438e-50 |
| MsG0280007976.01 | MsG0380012208.01 | 0.812017 | 5.237433e-51 | 3.292307e-48 |
| MsG0280008388.01 | MsG0380012208.01 | 0.837617 | 4.677258e-57 | 6.109567e-54 |
| MsG0280008390.01 | MsG0380012208.01 | 0.800295 | 1.540868e-48 | 7.149012e-46 |
| MsG0280008392.01 | MsG0380012208.01 | 0.806279 | 8.884995e-50 | 4.803074e-47 |
| MsG0280008394.01 | MsG0380012208.01 | 0.839982 | 1.143698e-57 | 1.606415e-54 |
| MsG0280008418.01 | MsG0380012208.01 | 0.801535 | 8.599689e-49 | 4.117032e-46 |
| MsG0280009756.01 | MsG0380012208.01 | 0.807696 | 4.455838e-50 | 2.498430e-47 |
| MsG0280010353.01 | MsG0380012208.01 | 0.816746 | 4.718096e-52 | 3.371413e-49 |
| MsG0280010503.01 | MsG0380012208.01 | 0.802827 | 4.663185e-49 | 2.307231e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380012208.01.T01 | MTR_7g015860 | 83.908 | 174 | 28 | 0 | 1 | 174 | 1 | 174 | 4.13e-102 | 307 |
| MsG0380012208.01.T01 | MTR_7g015860 | 53.205 | 156 | 49 | 5 | 149 | 304 | 333 | 464 | 2.58e-37 | 138 |
| MsG0380012208.01.T01 | MTR_8g012750 | 50.857 | 175 | 84 | 1 | 5 | 177 | 3 | 177 | 2.21e-54 | 184 |
| MsG0380012208.01.T01 | MTR_8g012750 | 35.606 | 132 | 83 | 1 | 174 | 303 | 344 | 475 | 4.03e-15 | 75.9 |
| MsG0380012208.01.T01 | MTR_2g089765 | 43.478 | 230 | 118 | 4 | 5 | 223 | 16 | 244 | 8.31e-53 | 180 |
| MsG0380012208.01.T01 | MTR_2g089765 | 40.141 | 142 | 70 | 5 | 174 | 306 | 353 | 488 | 2.39e-21 | 94.4 |
| MsG0380012208.01.T01 | MTR_2g089670 | 55.114 | 176 | 75 | 3 | 5 | 177 | 22 | 196 | 3.27e-49 | 171 |
| MsG0380012208.01.T01 | MTR_2g089670 | 38.406 | 138 | 78 | 3 | 174 | 306 | 348 | 483 | 5.10e-17 | 81.6 |
| MsG0380012208.01.T01 | MTR_2g089665 | 49.133 | 173 | 84 | 3 | 5 | 174 | 2 | 173 | 2.39e-48 | 165 |
| MsG0380012208.01.T01 | MTR_2g089650 | 41.919 | 198 | 104 | 4 | 5 | 196 | 9 | 201 | 1.46e-42 | 152 |
| MsG0380012208.01.T01 | MTR_2g089650 | 34.559 | 136 | 73 | 6 | 174 | 301 | 337 | 464 | 4.44e-13 | 69.7 |
| MsG0380012208.01.T01 | MTR_3g435300 | 35.945 | 217 | 131 | 3 | 6 | 216 | 4 | 218 | 1.53e-39 | 140 |
| MsG0380012208.01.T01 | MTR_2g089755 | 42.286 | 175 | 93 | 3 | 28 | 196 | 37 | 209 | 8.87e-39 | 142 |
| MsG0380012208.01.T01 | MTR_2g089755 | 32.558 | 129 | 77 | 5 | 176 | 301 | 355 | 476 | 1.58e-12 | 68.2 |
| MsG0380012208.01.T01 | MTR_3g028210 | 44.186 | 172 | 90 | 4 | 5 | 174 | 8 | 175 | 3.14e-38 | 141 |
| MsG0380012208.01.T01 | MTR_3g028210 | 30.935 | 139 | 80 | 3 | 174 | 303 | 336 | 467 | 9.62e-13 | 68.6 |
| MsG0380012208.01.T01 | MTR_2g089735 | 45.946 | 148 | 77 | 2 | 32 | 176 | 30 | 177 | 2.04e-36 | 136 |
| MsG0380012208.01.T01 | MTR_2g089735 | 35.461 | 141 | 73 | 6 | 164 | 301 | 337 | 462 | 1.08e-14 | 74.7 |
| MsG0380012208.01.T01 | MTR_3g087640 | 35.321 | 218 | 133 | 3 | 6 | 216 | 10 | 226 | 2.60e-34 | 130 |
| MsG0380012208.01.T01 | MTR_3g087640 | 31.579 | 133 | 81 | 4 | 174 | 301 | 346 | 473 | 2.22e-13 | 70.9 |
| MsG0380012208.01.T01 | MTR_7g014330 | 38.889 | 198 | 106 | 5 | 6 | 196 | 3 | 192 | 4.35e-34 | 129 |
| MsG0380012208.01.T01 | MTR_7g014230 | 33.816 | 207 | 123 | 5 | 4 | 209 | 3 | 196 | 8.49e-31 | 120 |
| MsG0380012208.01.T01 | MTR_7g014250 | 36.923 | 195 | 108 | 5 | 6 | 193 | 3 | 189 | 6.09e-30 | 118 |
| MsG0380012208.01.T01 | MTR_7g014630 | 31.739 | 230 | 140 | 5 | 5 | 230 | 9 | 225 | 1.33e-28 | 113 |
| MsG0380012208.01.T01 | MTR_7g014200 | 35.028 | 177 | 103 | 4 | 2 | 174 | 6 | 174 | 2.83e-28 | 114 |
| MsG0380012208.01.T01 | MTR_6g015850 | 37.500 | 176 | 100 | 3 | 2 | 174 | 5 | 173 | 1.99e-27 | 111 |
| MsG0380012208.01.T01 | MTR_6g015850 | 28.571 | 140 | 82 | 4 | 174 | 303 | 329 | 460 | 1.18e-11 | 65.5 |
| MsG0380012208.01.T01 | MTR_7g014160 | 33.523 | 176 | 106 | 3 | 2 | 174 | 6 | 173 | 2.70e-27 | 111 |
| MsG0380012208.01.T01 | MTR_7g014180 | 33.898 | 177 | 106 | 3 | 4 | 177 | 6 | 174 | 1.70e-26 | 103 |
| MsG0380012208.01.T01 | MTR_7g014620 | 28.899 | 218 | 142 | 3 | 23 | 237 | 10 | 217 | 2.78e-26 | 107 |
| MsG0380012208.01.T01 | MTR_7g014610 | 29.762 | 252 | 157 | 5 | 3 | 246 | 6 | 245 | 2.83e-26 | 108 |
| MsG0380012208.01.T01 | MTR_6g015815 | 36.628 | 172 | 99 | 3 | 6 | 174 | 9 | 173 | 3.65e-24 | 102 |
| MsG0380012208.01.T01 | MTR_6g015815 | 29.286 | 140 | 82 | 3 | 174 | 303 | 331 | 463 | 1.53e-13 | 71.2 |
| MsG0380012208.01.T01 | MTR_6g015830 | 35.676 | 185 | 108 | 4 | 2 | 182 | 5 | 182 | 7.56e-24 | 101 |
| MsG0380012208.01.T01 | MTR_6g015320 | 35.088 | 171 | 101 | 4 | 5 | 174 | 8 | 169 | 1.44e-20 | 92.0 |
| MsG0380012208.01.T01 | MTR_6g015320 | 27.972 | 143 | 83 | 3 | 174 | 303 | 322 | 457 | 2.62e-11 | 64.3 |
| MsG0380012208.01.T01 | MTR_7g013850 | 32.237 | 152 | 89 | 5 | 31 | 174 | 32 | 177 | 6.57e-17 | 81.3 |
| MsG0380012208.01.T01 | MTR_6g015315 | 35.417 | 144 | 85 | 3 | 32 | 174 | 30 | 166 | 8.63e-15 | 74.7 |
| MsG0380012208.01.T01 | MTR_6g015315 | 28.148 | 135 | 90 | 3 | 174 | 303 | 323 | 455 | 8.11e-13 | 68.9 |
| MsG0380012208.01.T01 | MTR_2g089745 | 38.667 | 75 | 46 | 0 | 229 | 303 | 6 | 80 | 4.28e-13 | 64.3 |
| MsG0380012208.01.T01 | MTR_3g435290 | 32.800 | 125 | 74 | 4 | 180 | 301 | 1 | 118 | 1.48e-12 | 63.9 |
| MsG0380012208.01.T01 | MTR_7g014340 | 45.588 | 68 | 36 | 1 | 6 | 72 | 3 | 70 | 2.27e-11 | 60.1 |
| MsG0380012208.01.T01 | MTR_7g014670 | 41.176 | 85 | 43 | 1 | 207 | 284 | 159 | 243 | 5.14e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380012208.01.T01 | AT1G03940 | 41.520 | 171 | 97 | 3 | 6 | 174 | 9 | 178 | 5.11e-41 | 148 |
| MsG0380012208.01.T01 | AT1G03940 | 30.882 | 136 | 81 | 3 | 174 | 301 | 335 | 465 | 3.18e-15 | 76.3 |
| MsG0380012208.01.T01 | AT1G03495 | 40.351 | 171 | 99 | 3 | 6 | 174 | 9 | 178 | 2.35e-39 | 141 |
| MsG0380012208.01.T01 | AT5G39080 | 29.714 | 175 | 116 | 3 | 1 | 174 | 1 | 169 | 8.20e-22 | 95.5 |
| MsG0380012208.01.T01 | AT3G29670 | 32.558 | 172 | 106 | 4 | 7 | 174 | 5 | 170 | 6.13e-21 | 92.8 |
| MsG0380012208.01.T01 | AT5G39090 | 30.055 | 183 | 121 | 3 | 1 | 182 | 1 | 177 | 9.85e-21 | 92.4 |
| MsG0380012208.01.T01 | AT3G29680 | 33.553 | 152 | 94 | 3 | 24 | 174 | 21 | 166 | 1.86e-19 | 88.6 |
| MsG0380012208.01.T01 | AT5G61160 | 29.143 | 175 | 114 | 4 | 5 | 176 | 3 | 170 | 7.09e-17 | 81.3 |
| MsG0380012208.01.T01 | AT5G39050 | 30.857 | 175 | 114 | 4 | 1 | 174 | 6 | 174 | 9.23e-17 | 80.9 |
| MsG0380012208.01.T01 | AT3G29635 | 29.193 | 161 | 106 | 3 | 24 | 182 | 25 | 179 | 2.26e-16 | 79.7 |
| MsG0380012208.01.T01 | AT3G29590 | 29.714 | 175 | 109 | 5 | 2 | 174 | 5 | 167 | 2.54e-16 | 79.3 |
Find 69 sgRNAs with CRISPR-Local
Find 152 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTATTGGAATAGAAATTA+AGG | 0.170988 | 3:-12710753 | MsG0380012208.01.T01:CDS |
| AATACTTGGTGATGGAATTA+AGG | 0.216411 | 3:+12712007 | None:intergenic |
| GTTTGATTGATCCACTAAAA+AGG | 0.238232 | 3:-12710730 | MsG0380012208.01.T01:CDS |
| TTTGAAATTGCAAGATCTTT+TGG | 0.264613 | 3:+12712041 | None:intergenic |
| ACTTCCAAAGAGAAAGTTAT+TGG | 0.285098 | 3:-12710804 | MsG0380012208.01.T01:CDS |
| ATGTAAGGGGTTAGTGGTTT+GGG | 0.289614 | 3:+12712143 | None:intergenic |
| TGTGAAGCAGTTAATTCTAT+TGG | 0.291099 | 3:-12710767 | MsG0380012208.01.T01:CDS |
| TATCTCTAAGTTGAGCTTCT+AGG | 0.296611 | 3:+12710456 | None:intergenic |
| TCTCCCAATAACTTTCTCTT+TGG | 0.330117 | 3:+12710800 | None:intergenic |
| TGAGTCACCTTGACCTTCCT+TGG | 0.334538 | 3:-12712316 | MsG0380012208.01.T01:CDS |
| TAGAGAATGTAAGGGGTTAG+TGG | 0.339746 | 3:+12712137 | None:intergenic |
| AATGTGTATGAAACTAATTT+TGG | 0.344845 | 3:-12710620 | MsG0380012208.01.T01:CDS |
| TCTATTGGAATAGAAATTAA+GGG | 0.350626 | 3:-12710752 | MsG0380012208.01.T01:CDS |
| CAAATTGTGAGTCCAAAGTT+TGG | 0.369629 | 3:+12711930 | None:intergenic |
| TGAAGTTGGGATGGTGTTAG+AGG | 0.372013 | 3:-12710507 | MsG0380012208.01.T01:CDS |
| AATGTAAGGGGTTAGTGGTT+TGG | 0.389485 | 3:+12712142 | None:intergenic |
| GAGGTGGTTGAAGTTTGATT+TGG | 0.389875 | 3:+12712076 | None:intergenic |
| AGGAGAAAGGGAAGAAATGT+TGG | 0.393732 | 3:+12712183 | None:intergenic |
| GTTTGTTTCCATGGATGATA+AGG | 0.395279 | 3:-12712408 | None:intergenic |
| ATACTTGGTGATGGAATTAA+GGG | 0.402968 | 3:+12712008 | None:intergenic |
| CCTTGAGAGTAGAGAATGTA+AGG | 0.406086 | 3:+12712128 | None:intergenic |
| TGAAGAATTTCACTCAAAAC+AGG | 0.418130 | 3:+12710587 | None:intergenic |
| GAATTGGGAGTGTAGTTTGA+AGG | 0.433069 | 3:+12712231 | None:intergenic |
| GAAGATCATGGCATTGAAGT+TGG | 0.433604 | 3:-12710521 | MsG0380012208.01.T01:CDS |
| TTTACAACGTGCTAGGGACT+TGG | 0.438891 | 3:-12710690 | MsG0380012208.01.T01:CDS |
| CTTCCAAAGAGAAAGTTATT+GGG | 0.446949 | 3:-12710803 | MsG0380012208.01.T01:CDS |
| GGAAGAAATGTTGGAGAGTG+AGG | 0.448814 | 3:+12712192 | None:intergenic |
| AGAAAGTTATTGGGAGAGAA+TGG | 0.452091 | 3:-12710794 | MsG0380012208.01.T01:CDS |
| GATGGAATTAAGGGAGCATA+AGG | 0.456545 | 3:+12712017 | None:intergenic |
| CACATTGTTGTTCCCAACAT+TGG | 0.456708 | 3:-12711973 | MsG0380012208.01.T01:CDS |
| GTTTCATACACATTAAACTT+TGG | 0.462228 | 3:+12710629 | None:intergenic |
| TTACAACGTGCTAGGGACTT+GGG | 0.476923 | 3:-12710689 | MsG0380012208.01.T01:CDS |
| AGCTCAACTTAGAGATATTG+TGG | 0.487736 | 3:-12710450 | MsG0380012208.01.T01:CDS |
| AATGGAATTGTGATTGAAGA+TGG | 0.495357 | 3:+12712338 | None:intergenic |
| GGAAGGTCAAGGTGACTCAA+TGG | 0.503792 | 3:+12712320 | None:intergenic |
| AAGATCATGGCATTGAAGTT+GGG | 0.519789 | 3:-12710520 | MsG0380012208.01.T01:CDS |
| GGAAGTGTTGTGTGGAATGA+GGG | 0.523915 | 3:+12712252 | None:intergenic |
| GATGGTGTTAGAGGCAGCTC+AGG | 0.527956 | 3:-12710498 | MsG0380012208.01.T01:CDS |
| TGATTTGAATGGCCAATGTT+GGG | 0.533369 | 3:+12711961 | None:intergenic |
| GTGATTTGAATGGCCAATGT+TGG | 0.534522 | 3:+12711960 | None:intergenic |
| AAAACGGTCTTAGAGGAGAA+AGG | 0.536105 | 3:+12712170 | None:intergenic |
| TTGTTTAGGCTCTTGTATTG+TGG | 0.536554 | 3:-12710828 | MsG0380012208.01.T01:intron |
| GACCTTCACCTTATCATCCA+TGG | 0.538399 | 3:+12712400 | None:intergenic |
| TCTTGTAAAATACTTGGTGA+TGG | 0.539920 | 3:+12711999 | None:intergenic |
| TTCACATATTGTAAATGAGA+TGG | 0.543340 | 3:+12712100 | None:intergenic |
| AGTTCTAAAGATGAAGATCA+TGG | 0.559685 | 3:-12710533 | MsG0380012208.01.T01:CDS |
| CCTTACATTCTCTACTCTCA+AGG | 0.561559 | 3:-12712128 | MsG0380012208.01.T01:CDS |
| ATGGAATTAAGGGAGCATAA+GGG | 0.563250 | 3:+12712018 | None:intergenic |
| AGGAAGTGTTGTGTGGAATG+AGG | 0.565042 | 3:+12712251 | None:intergenic |
| GAAGAAATGTTGGAGAGTGA+GGG | 0.577022 | 3:+12712193 | None:intergenic |
| GTGCCATCTTGTAAAATACT+TGG | 0.580654 | 3:+12711993 | None:intergenic |
| AAACGGTCTTAGAGGAGAAA+GGG | 0.581723 | 3:+12712171 | None:intergenic |
| TTCCATGGATGATAAGGTGA+AGG | 0.582457 | 3:-12712402 | None:intergenic |
| TACAACGTGCTAGGGACTTG+GGG | 0.583528 | 3:-12710688 | MsG0380012208.01.T01:CDS |
| GCTCAACTTAGAGATATTGT+GGG | 0.589932 | 3:-12710449 | MsG0380012208.01.T01:CDS |
| TTTCGACATGAAATTGCGGA+TGG | 0.590298 | 3:-12711900 | MsG0380012208.01.T01:intron |
| TTTGAGTGAAATTCTTCATG+TGG | 0.605496 | 3:-12710582 | MsG0380012208.01.T01:CDS |
| TAAGGGGTTAGTGGTTTGGG+AGG | 0.607933 | 3:+12712146 | None:intergenic |
| TTGGTGAATTGGATATGAGG+TGG | 0.610626 | 3:+12712060 | None:intergenic |
| ATATGGGAGCAGCGAAACCA+AGG | 0.617092 | 3:+12712299 | None:intergenic |
| AGTTTGAAGGAAGTGTTGTG+TGG | 0.627277 | 3:+12712244 | None:intergenic |
| CTTGAGAGTAGAGAATGTAA+GGG | 0.628790 | 3:+12712129 | None:intergenic |
| AGCGAAACCAAGGAAGGTCA+AGG | 0.639049 | 3:+12712309 | None:intergenic |
| GGGAGCAGCGAAACCAAGGA+AGG | 0.642409 | 3:+12712303 | None:intergenic |
| TCATGGCATTGAAGTTGGGA+TGG | 0.653838 | 3:-12710516 | MsG0380012208.01.T01:CDS |
| TTGAGAGTAGAGAATGTAAG+GGG | 0.670653 | 3:+12712130 | None:intergenic |
| GATGGAAGAGAACCTTGTGG+AGG | 0.684993 | 3:+12712356 | None:intergenic |
| TGTCAATTGAGTCCTCCACA+AGG | 0.687610 | 3:-12712368 | MsG0380012208.01.T01:CDS |
| GAAGATGGAAGAGAACCTTG+TGG | 0.732063 | 3:+12712353 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATACATATACATAAATA+TGG | + | Chr3:12711717-12711736 | None:intergenic | 10.0% |
| !! | AAATACATATACATAAATAT+GGG | + | Chr3:12711716-12711735 | None:intergenic | 10.0% |
| !!! | ATTTAACATTATTTTTGTTT+TGG | - | Chr3:12711787-12711806 | MsG0380012208.01.T01:intron | 10.0% |
| !! | TATATGTTATAAATTGCATA+TGG | + | Chr3:12711768-12711787 | None:intergenic | 15.0% |
| !! | TTCATCATTTCATTAAATAT+TGG | - | Chr3:12710968-12710987 | MsG0380012208.01.T01:intron | 15.0% |
| !!! | AAACTTTGTTTAAGATTTTT+TGG | + | Chr3:12711069-12711088 | None:intergenic | 15.0% |
| !!! | AACTTTGTTTAAGATTTTTT+GGG | + | Chr3:12711068-12711087 | None:intergenic | 15.0% |
| !!! | AAGATTTCAACAAATTATTT+TGG | - | Chr3:12711983-12712002 | MsG0380012208.01.T01:CDS | 15.0% |
| !!! | AATTATTTTGGAAATTGTTT+AGG | - | Chr3:12711995-12712014 | MsG0380012208.01.T01:CDS | 15.0% |
| !!! | ATTTATGTATATGTATTTTG+TGG | - | Chr3:12711718-12711737 | MsG0380012208.01.T01:intron | 15.0% |
| !!! | TTTGTTCATTTTTTTGATAA+GGG | - | Chr3:12711594-12711613 | MsG0380012208.01.T01:intron | 15.0% |
| !!! | TTTTGTTCATTTTTTTGATA+AGG | - | Chr3:12711593-12711612 | MsG0380012208.01.T01:intron | 15.0% |
| !! | AAGTGGAAAAATTGAAAAAA+TGG | - | Chr3:12711184-12711203 | MsG0380012208.01.T01:intron | 20.0% |
| !! | GTTACAAAAAGTAAAACTAT+TGG | - | Chr3:12711210-12711229 | MsG0380012208.01.T01:intron | 20.0% |
| !! | TCTATTGGAATAGAAATTAA+GGG | - | Chr3:12712085-12712104 | MsG0380012208.01.T01:CDS | 20.0% |
| !! | TTCTATTGGAATAGAAATTA+AGG | - | Chr3:12712084-12712103 | MsG0380012208.01.T01:CDS | 20.0% |
| !! | TTGTTGAAATCTTAAAATCA+AGG | + | Chr3:12711976-12711995 | None:intergenic | 20.0% |
| !!! | AATGATTTTGAAGAGAATTA+TGG | - | Chr3:12711351-12711370 | MsG0380012208.01.T01:intron | 20.0% |
| !!! | AATGTGTATGAAACTAATTT+TGG | - | Chr3:12712217-12712236 | MsG0380012208.01.T01:CDS | 20.0% |
| !!! | AGTAGTAAATTCTTTTCATA+TGG | + | Chr3:12710558-12710577 | None:intergenic | 20.0% |
| !!! | ATTTTTTCAATTTTTCCACT+TGG | + | Chr3:12711185-12711204 | None:intergenic | 20.0% |
| !!! | GTAGTAAATTCTTTTCATAT+GGG | + | Chr3:12710557-12710576 | None:intergenic | 20.0% |
| !!! | TTATGGTTTTGGATTTTTAA+TGG | - | Chr3:12711368-12711387 | MsG0380012208.01.T01:intron | 20.0% |
| !!! | TTTGATAACAATGCTTAAAA+TGG | + | Chr3:12711404-12711423 | None:intergenic | 20.0% |
| ! | ATAATGTCTCTATTGTGTAA+CGG | + | Chr3:12711039-12711058 | None:intergenic | 25.0% |
| ! | GTTTCATACACATTAAACTT+TGG | + | Chr3:12712211-12712230 | None:intergenic | 25.0% |
| ! | TGGAAAAATAGTGATTTGAA+TGG | + | Chr3:12710890-12710909 | None:intergenic | 25.0% |
| ! | TTCACATATTGTAAATGAGA+TGG | + | Chr3:12710740-12710759 | None:intergenic | 25.0% |
| ! | TTTGATTGATCCACTAAAAA+GGG | - | Chr3:12712108-12712127 | MsG0380012208.01.T01:CDS | 25.0% |
| !! | AGTGAAGGAATGAAAATTTT+TGG | + | Chr3:12711690-12711709 | None:intergenic | 25.0% |
| !! | CTAGTAGATTCTATTGTTTT+TGG | + | Chr3:12711117-12711136 | None:intergenic | 25.0% |
| !! | GTATGAAACTAATTTTGGAT+GGG | - | Chr3:12712222-12712241 | MsG0380012208.01.T01:CDS | 25.0% |
| !! | TATGAAACTAATTTTGGATG+GGG | - | Chr3:12712223-12712242 | MsG0380012208.01.T01:CDS | 25.0% |
| !! | TGTATGAAACTAATTTTGGA+TGG | - | Chr3:12712221-12712240 | MsG0380012208.01.T01:CDS | 25.0% |
| !! | TTTGAAGAGAATTATGGTTT+TGG | - | Chr3:12711357-12711376 | MsG0380012208.01.T01:intron | 25.0% |
| !!! | AAAGAGAGTTTTTGAGAATT+GGG | + | Chr3:12710624-12710643 | None:intergenic | 25.0% |
| !!! | ATCACTATTTTTCCAAACTT+TGG | - | Chr3:12710895-12710914 | MsG0380012208.01.T01:intron | 25.0% |
| !!! | TGTTACATGTTCTTTGTTTT+GGG | - | Chr3:12711263-12711282 | MsG0380012208.01.T01:intron | 25.0% |
| !!! | TTGTTACATGTTCTTTGTTT+TGG | - | Chr3:12711262-12711281 | MsG0380012208.01.T01:intron | 25.0% |
| !!! | TTTGAAATTGCAAGATCTTT+TGG | + | Chr3:12710799-12710818 | None:intergenic | 25.0% |
| AAAATCGCAATCAAAATCGA+AGG | + | Chr3:12711818-12711837 | None:intergenic | 30.0% | |
| AAAGTTTCTTAGAACGACAT+TGG | - | Chr3:12711082-12711101 | MsG0380012208.01.T01:intron | 30.0% | |
| AATGGAATTGTGATTGAAGA+TGG | + | Chr3:12710502-12710521 | None:intergenic | 30.0% | |
| ACTTCCAAAGAGAAAGTTAT+TGG | - | Chr3:12712033-12712052 | MsG0380012208.01.T01:CDS | 30.0% | |
| CAAAGAACATGTAACAACAA+AGG | + | Chr3:12711259-12711278 | None:intergenic | 30.0% | |
| CTTCCAAAGAGAAAGTTATT+GGG | - | Chr3:12712034-12712053 | MsG0380012208.01.T01:CDS | 30.0% | |
| GTTTGATTGATCCACTAAAA+AGG | - | Chr3:12712107-12712126 | MsG0380012208.01.T01:CDS | 30.0% | |
| TAAAATCGCAATCAAAATCG+AGG | + | Chr3:12711819-12711838 | None:intergenic | 30.0% | |
| TAAGTTTCCACTTGAAAGTA+AGG | + | Chr3:12710995-12711014 | None:intergenic | 30.0% | |
| TATATTAACACATCACCAAG+TGG | - | Chr3:12711167-12711186 | MsG0380012208.01.T01:intron | 30.0% | |
| TGAAGAATTTCACTCAAAAC+AGG | + | Chr3:12712253-12712272 | None:intergenic | 30.0% | |
| TGTGAAGCAGTTAATTCTAT+TGG | - | Chr3:12712070-12712089 | MsG0380012208.01.T01:CDS | 30.0% | |
| TTTGAGTGAAATTCTTCATG+TGG | - | Chr3:12712255-12712274 | MsG0380012208.01.T01:CDS | 30.0% | |
| ! | AAATCGAAGGATTTTACTCA+AGG | + | Chr3:12711883-12711902 | None:intergenic | 30.0% |
| ! | ATGAAACTAATTTTGGATGG+GGG | - | Chr3:12712224-12712243 | MsG0380012208.01.T01:CDS | 30.0% |
| ! | CCTTTCAGGTATTTATAGAA+CGG | + | Chr3:12711667-12711686 | None:intergenic | 30.0% |
| ! | CTTTCAGGTATTTATAGAAC+GGG | + | Chr3:12711666-12711685 | None:intergenic | 30.0% |
| ! | TCACCAAGTATTTTACAAGA+TGG | - | Chr3:12710841-12710860 | MsG0380012208.01.T01:intron | 30.0% |
| ! | TCTTGTAAAATACTTGGTGA+TGG | + | Chr3:12710841-12710860 | None:intergenic | 30.0% |
| !! | AATACTTGGTGATGGAATTA+AGG | + | Chr3:12710833-12710852 | None:intergenic | 30.0% |
| !! | AGTTCTAAAGATGAAGATCA+TGG | - | Chr3:12712304-12712323 | MsG0380012208.01.T01:CDS | 30.0% |
| !! | ATACTTGGTGATGGAATTAA+GGG | + | Chr3:12710832-12710851 | None:intergenic | 30.0% |
| !! | ATAGGATTTTGCCTGTTTTT+GGG | + | Chr3:12711501-12711520 | None:intergenic | 30.0% |
| !! | GAAAGAGAGTTTTTGAGAAT+TGG | + | Chr3:12710625-12710644 | None:intergenic | 30.0% |
| !! | TATGTTTTTACAACGTGCTA+GGG | - | Chr3:12712141-12712160 | MsG0380012208.01.T01:CDS | 30.0% |
| !! | TTATGTTTTTACAACGTGCT+AGG | - | Chr3:12712140-12712159 | MsG0380012208.01.T01:CDS | 30.0% |
| !!! | AGGATTTTGATGGATTTTGA+AGG | - | Chr3:12711569-12711588 | MsG0380012208.01.T01:intron | 30.0% |
| !!! | ATGAAAATTTTTGGCCTTTC+AGG | + | Chr3:12711681-12711700 | None:intergenic | 30.0% |
| !!! | GTAGATTCTATTGTTTTTGG+TGG | + | Chr3:12711114-12711133 | None:intergenic | 30.0% |
| AGAAAGTTATTGGGAGAGAA+TGG | - | Chr3:12712043-12712062 | MsG0380012208.01.T01:CDS | 35.0% | |
| AGACTTTACTTCAAGTCGAA+AGG | + | Chr3:12711941-12711960 | None:intergenic | 35.0% | |
| AGCTCAACTTAGAGATATTG+TGG | - | Chr3:12712387-12712406 | MsG0380012208.01.T01:CDS | 35.0% | |
| CAAATTGTGAGTCCAAAGTT+TGG | + | Chr3:12710910-12710929 | None:intergenic | 35.0% | |
| CATAAATATGGGAGAAGTGA+AGG | + | Chr3:12711705-12711724 | None:intergenic | 35.0% | |
| CCGTTCTATAAATACCTGAA+AGG | - | Chr3:12711664-12711683 | MsG0380012208.01.T01:intron | 35.0% | |
| CTTGAGAGTAGAGAATGTAA+GGG | + | Chr3:12710711-12710730 | None:intergenic | 35.0% | |
| GACTTTACTTCAAGTCGAAA+GGG | + | Chr3:12711940-12711959 | None:intergenic | 35.0% | |
| GCTCAACTTAGAGATATTGT+GGG | - | Chr3:12712388-12712407 | MsG0380012208.01.T01:CDS | 35.0% | |
| GTGCCATCTTGTAAAATACT+TGG | + | Chr3:12710847-12710866 | None:intergenic | 35.0% | |
| TACTAGTAGCAACAACAACA+TGG | - | Chr3:12711131-12711150 | MsG0380012208.01.T01:intron | 35.0% | |
| TATTGGTCCTTACTTTCAAG+TGG | - | Chr3:12710985-12711004 | MsG0380012208.01.T01:intron | 35.0% | |
| TCTCCCAATAACTTTCTCTT+TGG | + | Chr3:12712040-12712059 | None:intergenic | 35.0% | |
| TGAAATCCATTCAAAATCGC+AGG | - | Chr3:12711549-12711568 | MsG0380012208.01.T01:intron | 35.0% | |
| TGATTTGAATGGCCAATGTT+GGG | + | Chr3:12710879-12710898 | None:intergenic | 35.0% | |
| TTGAGAGTAGAGAATGTAAG+GGG | + | Chr3:12710710-12710729 | None:intergenic | 35.0% | |
| TTGTTTAGGCTCTTGTATTG+TGG | - | Chr3:12712009-12712028 | MsG0380012208.01.T01:CDS | 35.0% | |
| ! | AAGATCATGGCATTGAAGTT+GGG | - | Chr3:12712317-12712336 | MsG0380012208.01.T01:CDS | 35.0% |
| ! | AGATCTTCAACCCTTTTTAG+TGG | + | Chr3:12712121-12712140 | None:intergenic | 35.0% |
| ! | ATAAGGGTCAATTTTTGACC+TGG | - | Chr3:12711610-12711629 | MsG0380012208.01.T01:intron | 35.0% |
| ! | ATGGAATTAAGGGAGCATAA+GGG | + | Chr3:12710822-12710841 | None:intergenic | 35.0% |
| ! | CAAAATCCTGCGATTTTGAA+TGG | + | Chr3:12711558-12711577 | None:intergenic | 35.0% |
| ! | CACTTTTCGACATGAAATTG+CGG | - | Chr3:12710933-12710952 | MsG0380012208.01.T01:intron | 35.0% |
| ! | CTTTTGGTGAATTGGATATG+AGG | + | Chr3:12710783-12710802 | None:intergenic | 35.0% |
| ! | GACTTTTGTAGAATCGATGT+AGG | + | Chr3:12711861-12711880 | None:intergenic | 35.0% |
| ! | GATAGGATTTTGCCTGTTTT+TGG | + | Chr3:12711502-12711521 | None:intergenic | 35.0% |
| ! | TATCTCTAAGTTGAGCTTCT+AGG | + | Chr3:12712384-12712403 | None:intergenic | 35.0% |
| ! | TCAAAATCGCAGGATTTTGA+TGG | - | Chr3:12711559-12711578 | MsG0380012208.01.T01:intron | 35.0% |
| ! | TGCAAGATCTTTTGGTGAAT+TGG | + | Chr3:12710791-12710810 | None:intergenic | 35.0% |
| !! | CGATTTTGTGCGATTTTGAT+AGG | + | Chr3:12711519-12711538 | None:intergenic | 35.0% |
| !!! | AGGATTTTGAGACTTAAGTC+GGG | + | Chr3:12711429-12711448 | None:intergenic | 35.0% |
| !!! | CAGGATTTTGAGACTTAAGT+CGG | + | Chr3:12711430-12711449 | None:intergenic | 35.0% |
| !!! | TTCTTTGTTTTGGGTATGCA+AGG | - | Chr3:12711272-12711291 | MsG0380012208.01.T01:intron | 35.0% |
| AAAACGGTCTTAGAGGAGAA+AGG | + | Chr3:12710670-12710689 | None:intergenic | 40.0% | |
| AAACGGTCTTAGAGGAGAAA+GGG | + | Chr3:12710669-12710688 | None:intergenic | 40.0% | |
| AACGGGTCATGGATTCAAAT+CGG | + | Chr3:12711649-12711668 | None:intergenic | 40.0% | |
| AGGAGAAAGGGAAGAAATGT+TGG | + | Chr3:12710657-12710676 | None:intergenic | 40.0% | |
| ATCGGGTCAATTTACAAACC+AGG | + | Chr3:12711631-12711650 | None:intergenic | 40.0% | |
| CATAGCAAAGTCCCAAAAAC+AGG | - | Chr3:12711487-12711506 | MsG0380012208.01.T01:intron | 40.0% | |
| CCTTACATTCTCTACTCTCA+AGG | - | Chr3:12710709-12710728 | MsG0380012208.01.T01:CDS | 40.0% | |
| CCTTGAGAGTAGAGAATGTA+AGG | + | Chr3:12710712-12710731 | None:intergenic | 40.0% | |
| CGACTTAAGTCTCAAAATCC+TGG | - | Chr3:12711428-12711447 | MsG0380012208.01.T01:intron | 40.0% | |
| GAAGAAATGTTGGAGAGTGA+GGG | + | Chr3:12710647-12710666 | None:intergenic | 40.0% | |
| GAGGTGGTTGAAGTTTGATT+TGG | + | Chr3:12710764-12710783 | None:intergenic | 40.0% | |
| GGTATTTATAGAACGGGTCA+TGG | + | Chr3:12711660-12711679 | None:intergenic | 40.0% | |
| GTGATTTGAATGGCCAATGT+TGG | + | Chr3:12710880-12710899 | None:intergenic | 40.0% | |
| TACACAAAGTCGCAAAAACC+AGG | + | Chr3:12711449-12711468 | None:intergenic | 40.0% | |
| TAGAGAATGTAAGGGGTTAG+TGG | + | Chr3:12710703-12710722 | None:intergenic | 40.0% | |
| TCGAAAGGGAGTAGCAAAAT+CGG | + | Chr3:12711926-12711945 | None:intergenic | 40.0% | |
| TCGATGTAGGATAGCAAAGT+CGG | + | Chr3:12711848-12711867 | None:intergenic | 40.0% | |
| TTGGTGAATTGGATATGAGG+TGG | + | Chr3:12710780-12710799 | None:intergenic | 40.0% | |
| TTTCGACATGAAATTGCGGA+TGG | - | Chr3:12710937-12710956 | MsG0380012208.01.T01:intron | 40.0% | |
| ! | AATGTAAGGGGTTAGTGGTT+TGG | + | Chr3:12710698-12710717 | None:intergenic | 40.0% |
| ! | ATGTAAGGGGTTAGTGGTTT+GGG | + | Chr3:12710697-12710716 | None:intergenic | 40.0% |
| ! | CACATTGTTGTTCCCAACAT+TGG | - | Chr3:12710864-12710883 | MsG0380012208.01.T01:intron | 40.0% |
| ! | GAAGATCATGGCATTGAAGT+TGG | - | Chr3:12712316-12712335 | MsG0380012208.01.T01:CDS | 40.0% |
| ! | GAATTGGGAGTGTAGTTTGA+AGG | + | Chr3:12710609-12710628 | None:intergenic | 40.0% |
| ! | GATGGAATTAAGGGAGCATA+AGG | + | Chr3:12710823-12710842 | None:intergenic | 40.0% |
| ! | TAGTGGTTTGGGAGGAAAAA+CGG | + | Chr3:12710686-12710705 | None:intergenic | 40.0% |
| !! | AGTTTGAAGGAAGTGTTGTG+TGG | + | Chr3:12710596-12710615 | None:intergenic | 40.0% |
| !!! | CTGTTTTTGGGACTTTGCTA+TGG | + | Chr3:12711489-12711508 | None:intergenic | 40.0% |
| ACGGGTCATGGATTCAAATC+GGG | + | Chr3:12711648-12711667 | None:intergenic | 45.0% | |
| CGAAAGGGAGTAGCAAAATC+GGG | + | Chr3:12711925-12711944 | None:intergenic | 45.0% | |
| CGATGTAGGATAGCAAAGTC+GGG | + | Chr3:12711847-12711866 | None:intergenic | 45.0% | |
| GAAGATGGAAGAGAACCTTG+TGG | + | Chr3:12710487-12710506 | None:intergenic | 45.0% | |
| GGAAGAAATGTTGGAGAGTG+AGG | + | Chr3:12710648-12710667 | None:intergenic | 45.0% | |
| TGTCAATTGAGTCCTCCACA+AGG | - | Chr3:12710469-12710488 | MsG0380012208.01.T01:CDS | 45.0% | |
| TTACAACGTGCTAGGGACTT+GGG | - | Chr3:12712148-12712167 | MsG0380012208.01.T01:CDS | 45.0% | |
| TTTACAACGTGCTAGGGACT+TGG | - | Chr3:12712147-12712166 | MsG0380012208.01.T01:CDS | 45.0% | |
| ! | TCATGGCATTGAAGTTGGGA+TGG | - | Chr3:12712321-12712340 | MsG0380012208.01.T01:CDS | 45.0% |
| ! | TGAAGTTGGGATGGTGTTAG+AGG | - | Chr3:12712330-12712349 | MsG0380012208.01.T01:CDS | 45.0% |
| !! | AGGAAGTGTTGTGTGGAATG+AGG | + | Chr3:12710589-12710608 | None:intergenic | 45.0% |
| !! | GGAAGTGTTGTGTGGAATGA+GGG | + | Chr3:12710588-12710607 | None:intergenic | 45.0% |
| AGCGAAACCAAGGAAGGTCA+AGG | + | Chr3:12710531-12710550 | None:intergenic | 50.0% | |
| ATATGGGAGCAGCGAAACCA+AGG | + | Chr3:12710541-12710560 | None:intergenic | 50.0% | |
| GATGGAAGAGAACCTTGTGG+AGG | + | Chr3:12710484-12710503 | None:intergenic | 50.0% | |
| GGAAGGTCAAGGTGACTCAA+TGG | + | Chr3:12710520-12710539 | None:intergenic | 50.0% | |
| GGGAGGAAAAACGGTCTTAG+AGG | + | Chr3:12710677-12710696 | None:intergenic | 50.0% | |
| TACAACGTGCTAGGGACTTG+GGG | - | Chr3:12712149-12712168 | MsG0380012208.01.T01:CDS | 50.0% | |
| TGAGTCACCTTGACCTTCCT+TGG | - | Chr3:12710521-12710540 | MsG0380012208.01.T01:CDS | 50.0% | |
| ! | TAAGGGGTTAGTGGTTTGGG+AGG | + | Chr3:12710694-12710713 | None:intergenic | 50.0% |
| ! | GATGGTGTTAGAGGCAGCTC+AGG | - | Chr3:12712339-12712358 | MsG0380012208.01.T01:CDS | 55.0% |
| GGGAGCAGCGAAACCAAGGA+AGG | + | Chr3:12710537-12710556 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 12710439 | 12712420 | 12710439 | ID=MsG0380012208.01;Name=MsG0380012208.01 |
| Chr3 | mRNA | 12710439 | 12712420 | 12710439 | ID=MsG0380012208.01.T01;Parent=MsG0380012208.01;Name=MsG0380012208.01.T01;_AED=0.22;_eAED=0.22;_QI=0|0|0|1|1|1|2|0|307 |
| Chr3 | exon | 12711901 | 12712420 | 12711901 | ID=MsG0380012208.01.T01:exon:389;Parent=MsG0380012208.01.T01 |
| Chr3 | exon | 12710439 | 12710842 | 12710439 | ID=MsG0380012208.01.T01:exon:388;Parent=MsG0380012208.01.T01 |
| Chr3 | CDS | 12711901 | 12712420 | 12711901 | ID=MsG0380012208.01.T01:cds;Parent=MsG0380012208.01.T01 |
| Chr3 | CDS | 12710439 | 12710842 | 12710439 | ID=MsG0380012208.01.T01:cds;Parent=MsG0380012208.01.T01 |
| Gene Sequence |
| Protein sequence |
