AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280008388.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280008388.01.T01 MTR_2g041550 99.524 210 1 0 1 210 1 210 1.03e-150 417
MsG0280008388.01.T01 MTR_2g041570 84.762 210 32 0 1 210 1 210 9.60e-127 356
MsG0280008388.01.T01 MTR_2g041580 84.286 210 33 0 1 210 1 210 1.01e-126 356
MsG0280008388.01.T01 MTR_8g020590 68.269 208 65 1 4 210 1 208 1.79e-94 275
MsG0280008388.01.T01 MTR_8g020630 56.459 209 87 3 4 210 3 209 8.28e-79 235
MsG0280008388.01.T01 MTR_8g020650 57.513 193 80 2 18 210 19 209 1.30e-76 229
MsG0280008388.01.T01 MTR_8g020670 55.502 209 89 3 4 210 3 209 4.02e-76 228
MsG0280008388.01.T01 MTR_8g020610 51.675 209 97 2 4 210 1 207 4.28e-71 215
MsG0280008388.01.T01 MTR_2g044040 50.239 209 100 3 4 210 3 209 5.67e-67 205
MsG0280008388.01.T01 MTR_2g045100 52.153 209 96 3 4 210 3 209 7.62e-67 204
MsG0280008388.01.T01 MTR_3g019710 50.239 209 100 3 4 210 3 209 1.10e-64 199
MsG0280008388.01.T01 MTR_2g036120 50.962 208 98 3 4 209 3 208 1.32e-63 196
MsG0280008388.01.T01 MTR_3g019650 50.000 208 101 3 4 210 3 208 1.61e-63 196
MsG0280008388.01.T01 MTR_3g019680 50.000 208 101 3 4 210 3 208 2.69e-63 195
MsG0280008388.01.T01 MTR_8g020750 47.887 213 107 3 1 210 1 212 1.96e-61 191
MsG0280008388.01.T01 MTR_8g020770 46.948 213 109 3 1 210 1 212 2.06e-60 188
MsG0280008388.01.T01 MTR_0284s0010 48.325 209 104 3 4 210 3 209 7.88e-60 187
MsG0280008388.01.T01 MTR_4g010340 49.038 208 103 3 3 210 1 205 2.84e-59 185
MsG0280008388.01.T01 MTR_5g031460 46.445 211 110 3 1 210 1 209 4.70e-59 184
MsG0280008388.01.T01 MTR_7g011340 48.969 194 97 2 17 210 18 209 1.48e-57 181
MsG0280008388.01.T01 MTR_3g073170 42.791 215 113 5 1 210 1 210 4.77e-55 174
MsG0280008388.01.T01 MTR_8g020760 44.860 214 111 4 1 210 1 211 2.43e-54 172
MsG0280008388.01.T01 MTR_2g019780 42.396 217 113 5 1 210 1 212 1.76e-52 168
MsG0280008388.01.T01 MTR_3g019810 45.854 205 101 4 4 206 109 305 7.89e-49 162
MsG0280008388.01.T01 MTR_8g020763 39.674 184 110 1 27 210 8 190 3.30e-47 154
MsG0280008388.01.T01 MTR_2g030855 44.022 184 95 3 20 201 25 202 1.19e-42 143
MsG0280008388.01.T01 MTR_4g017050 41.981 212 106 5 7 203 4 213 2.76e-42 142
MsG0280008388.01.T01 MTR_5g046410 41.981 212 106 5 7 203 4 213 2.88e-42 142
MsG0280008388.01.T01 MTR_5g046430 41.981 212 106 5 7 203 4 213 2.88e-42 142
MsG0280008388.01.T01 MTR_4g017030 41.981 212 106 5 7 203 4 213 2.88e-42 142
MsG0280008388.01.T01 MTR_2g031270 46.296 162 82 2 20 179 26 184 8.91e-42 140
MsG0280008388.01.T01 MTR_6g005310 41.589 214 110 5 3 203 1 212 1.01e-41 140
MsG0280008388.01.T01 MTR_6g005360 44.920 187 95 4 23 203 28 212 1.53e-41 140
MsG0280008388.01.T01 MTR_4g017040 44.149 188 96 4 23 203 28 213 4.33e-41 139
MsG0280008388.01.T01 MTR_6g005340 41.121 214 111 5 3 203 1 212 6.64e-41 139
MsG0280008388.01.T01 MTR_1g079490 42.381 210 105 5 9 203 6 214 8.51e-41 138
MsG0280008388.01.T01 MTR_2g019250 43.617 188 97 4 23 203 28 213 1.28e-40 138
MsG0280008388.01.T01 MTR_6g005330 44.385 187 96 4 23 203 28 212 1.71e-40 137
MsG0280008388.01.T01 MTR_1g023770 41.667 168 94 2 40 203 39 206 1.31e-38 132
MsG0280008388.01.T01 MTR_1g085140 40.323 186 109 1 23 206 30 215 9.54e-38 130
MsG0280008388.01.T01 MTR_1g060120 39.378 193 109 2 21 206 30 221 1.36e-37 130
MsG0280008388.01.T01 MTR_2g030895 41.420 169 94 3 40 203 7 175 1.41e-37 129
MsG0280008388.01.T01 MTR_1g112200 36.816 201 122 2 3 203 9 204 1.85e-37 129
MsG0280008388.01.T01 MTR_2g030865 41.420 169 94 3 40 203 7 175 4.61e-37 127
MsG0280008388.01.T01 MTR_7g111240 41.398 186 104 2 23 206 26 208 9.98e-37 127
MsG0280008388.01.T01 MTR_5g036570 37.566 189 115 2 23 208 33 221 1.27e-36 127
MsG0280008388.01.T01 MTR_7g111240 40.860 186 108 1 23 206 26 211 3.77e-36 126
MsG0280008388.01.T01 MTR_1g085500 35.922 206 121 4 3 203 12 211 1.61e-33 119
MsG0280008388.01.T01 MTR_6g005380 42.945 163 86 3 14 171 19 179 2.57e-33 119
MsG0280008388.01.T01 MTR_4g027415 48.031 127 64 2 17 143 18 142 1.88e-32 114
MsG0280008388.01.T01 MTR_2g072560 44.828 145 70 4 4 142 3 143 3.21e-31 111
MsG0280008388.01.T01 MTR_2g031300 51.887 106 49 1 40 143 7 112 1.59e-30 110
MsG0280008388.01.T01 MTR_8g007300 38.806 134 81 1 37 170 48 180 7.10e-29 107
MsG0280008388.01.T01 MTR_6g005350 37.634 186 109 4 23 203 28 211 1.23e-28 107
MsG0280008388.01.T01 MTR_3g096330 35.638 188 106 4 1 175 551 736 2.85e-28 111
MsG0280008388.01.T01 MTR_3g019610 48.571 105 51 2 4 106 3 106 1.95e-26 98.6
MsG0280008388.01.T01 MTR_2g086630 32.381 210 118 5 2 203 8 201 4.08e-25 97.8
MsG0280008388.01.T01 MTR_2g086620 32.381 210 118 5 2 203 8 201 4.21e-25 97.8
MsG0280008388.01.T01 MTR_2g086640 32.536 209 119 5 2 203 7 200 1.85e-23 93.6
MsG0280008388.01.T01 MTR_4g052770 36.434 129 81 1 76 203 74 202 2.36e-20 85.1
MsG0280008388.01.T01 MTR_4g052780 35.659 129 82 1 76 203 74 202 7.23e-20 84.0
MsG0280008388.01.T01 MTR_2g096110 29.457 129 75 2 43 170 6 119 6.18e-13 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280008388.01.T01 AT5G20630 74.286 210 53 1 1 209 1 210 8.89e-109 311
MsG0280008388.01.T01 AT1G72610 65.865 208 71 0 3 210 1 208 2.31e-90 264
MsG0280008388.01.T01 AT3G04200 44.503 191 100 3 23 207 33 223 4.15e-42 142
MsG0280008388.01.T01 AT5G39160 43.684 190 99 3 23 207 30 216 9.22e-42 141
MsG0280008388.01.T01 AT5G39190 43.455 191 102 3 23 207 30 220 9.41e-41 138
MsG0280008388.01.T01 AT5G39160 43.455 191 102 3 23 207 30 220 1.25e-40 138
MsG0280008388.01.T01 AT3G62020 38.537 205 116 3 9 203 8 212 1.88e-40 137
MsG0280008388.01.T01 AT5G39110 44.149 188 98 3 23 203 30 217 2.09e-40 137
MsG0280008388.01.T01 AT5G39130 43.455 191 102 3 23 207 30 220 2.41e-40 137
MsG0280008388.01.T01 AT1G02335 36.493 211 130 2 1 207 6 216 7.66e-40 136
MsG0280008388.01.T01 AT3G05950 40.654 214 116 4 1 203 5 218 1.31e-39 135
MsG0280008388.01.T01 AT5G61750 41.436 181 90 3 1 171 1 175 5.77e-39 133
MsG0280008388.01.T01 AT1G18980 39.409 203 119 2 3 203 15 215 2.53e-38 132
MsG0280008388.01.T01 AT1G09560 46.951 164 83 2 23 184 30 191 3.63e-38 132
MsG0280008388.01.T01 AT5G38960 43.878 196 95 6 23 207 32 223 4.04e-38 132
MsG0280008388.01.T01 AT5G39120 40.092 217 115 5 3 204 1 217 5.23e-38 131
MsG0280008388.01.T01 AT1G18970 40.102 197 114 2 9 203 21 215 1.78e-37 130
MsG0280008388.01.T01 AT3G62020 40.000 170 99 2 37 203 14 183 1.79e-37 129
MsG0280008388.01.T01 AT5G26700 36.816 201 125 2 3 203 8 206 1.89e-37 129
MsG0280008388.01.T01 AT5G39150 39.631 217 116 4 3 204 1 217 3.12e-37 129
MsG0280008388.01.T01 AT5G39180 42.328 189 102 3 23 204 29 217 5.02e-37 129
MsG0280008388.01.T01 AT4G14630 41.667 192 97 4 23 203 32 219 1.04e-36 128
MsG0280008388.01.T01 AT3G04150 39.899 198 105 4 23 210 32 225 1.20e-36 128
MsG0280008388.01.T01 AT3G04150 40.782 179 101 2 37 210 60 238 4.00e-36 127
MsG0280008388.01.T01 AT3G05930 42.781 187 100 4 23 204 29 213 4.85e-36 126
MsG0280008388.01.T01 AT5G38940 47.059 153 77 2 23 171 32 184 8.84e-36 125
MsG0280008388.01.T01 AT5G38940 47.059 153 77 2 23 171 56 208 1.34e-35 126
MsG0280008388.01.T01 AT5G38910 45.856 181 82 4 14 182 17 193 6.01e-35 123
MsG0280008388.01.T01 AT3G04190 44.512 164 85 3 23 181 32 194 1.04e-34 123
MsG0280008388.01.T01 AT5G38930 46.405 153 78 2 23 171 32 184 1.28e-34 122
MsG0280008388.01.T01 AT5G39190 44.304 158 83 2 55 207 41 198 4.35e-34 120
MsG0280008388.01.T01 AT3G10080 39.306 173 99 2 21 188 30 201 4.71e-34 121
MsG0280008388.01.T01 AT3G04170 41.451 193 98 6 23 206 32 218 5.08e-34 121
MsG0280008388.01.T01 AT5G39160 44.304 158 83 2 55 207 41 198 5.34e-34 120
MsG0280008388.01.T01 AT3G10080 39.306 173 99 2 21 188 101 272 1.99e-33 121
MsG0280008388.01.T01 AT3G04180 40.314 191 106 4 23 206 32 221 6.88e-33 118
MsG0280008388.01.T01 AT1G10460 38.202 178 102 4 37 208 42 217 1.23e-32 117
MsG0280008388.01.T01 AT1G74820 35.385 195 122 2 11 203 30 222 9.65e-29 107
MsG0280008388.01.T01 AT5G38910 34.637 179 68 4 14 182 17 156 6.64e-15 70.5

Find 50 sgRNAs with CRISPR-Local

Find 59 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGAACCACCACTGTTAATT+TGG 0.158930 2:-30547957 None:intergenic
GATAATGTTTGAGGTGTTTC+CGG 0.296237 2:-30547686 None:intergenic
TAACCCTGGTTTACAGATAT+TGG 0.318535 2:+30548011 MsG0280008388.01.T01:CDS
AAGAAACTTAAGGGTGTTCT+TGG 0.319235 2:+30548108 MsG0280008388.01.T01:CDS
GAATATCCGGCGGGGCCATT+TGG 0.367744 2:-30547604 None:intergenic
ACTTTACAAAGGTGATGTTA+TGG 0.394160 2:+30547909 MsG0280008388.01.T01:CDS
TCACACTCACCCCGGTGCTT+CGG 0.412458 2:+30547813 MsG0280008388.01.T01:CDS
GCGCAATTTGCCGGTTTAAA+CGG 0.412670 2:+30547736 MsG0280008388.01.T01:CDS
GCATTCGACGCGCAATTTGC+CGG 0.427362 2:+30547727 MsG0280008388.01.T01:CDS
CCCCGGTGCTTCGGAGGTGT+TGG 0.428887 2:+30547822 MsG0280008388.01.T01:CDS
GTTTGAGGTGTTTCCGGCTG+CGG 0.433795 2:-30547680 None:intergenic
TTTGCCGGTTTAAACGGTCT+TGG 0.436173 2:+30547742 MsG0280008388.01.T01:CDS
AGGTGTTTCCGGCTGCGGCT+AGG 0.439256 2:-30547675 None:intergenic
GGCGGCTTTGATAATGTTTG+AGG 0.446545 2:-30547695 None:intergenic
CTCGCGCGTTTAGATTTAGC+TGG 0.448675 2:+30547772 MsG0280008388.01.T01:CDS
CGTTTAGATTTAGCTGGAGG+TGG 0.457705 2:+30547778 MsG0280008388.01.T01:CDS
AATTCCAAGACCGTTTAAAC+CGG 0.473337 2:-30547746 None:intergenic
GAGGTGTTGGTTGTTATTCA+AGG 0.473998 2:+30547835 MsG0280008388.01.T01:CDS
TTCCGGCTGCGGCTAGGCCG+TGG 0.476148 2:-30547669 None:intergenic
AACCAACACCTCCGAAGCAC+CGG 0.476326 2:-30547824 None:intergenic
AAGGGTGTTCTTGGAGGCAG+TGG 0.476941 2:+30548117 MsG0280008388.01.T01:CDS
TGCTGTAGTGAAGAAACTTA+AGG 0.483216 2:+30548098 MsG0280008388.01.T01:CDS
TACCACGGCCTAGCCGCAGC+CGG 0.483642 2:+30547667 MsG0280008388.01.T01:CDS
CACTCACCCCGGTGCTTCGG+AGG 0.485416 2:+30547816 MsG0280008388.01.T01:CDS
ATTCAAGGAACAATCTGTGC+TGG 0.486403 2:+30547850 MsG0280008388.01.T01:CDS
AAACTTAAGGGTGTTCTTGG+AGG 0.486792 2:+30548111 MsG0280008388.01.T01:CDS
GCAGATTACAATTTACCAAA+TGG 0.490944 2:+30547589 MsG0280008388.01.T01:CDS
GCAAATTGCGCGTCGAATGC+AGG 0.494231 2:-30547724 None:intergenic
GCTGTAGTGAAGAAACTTAA+GGG 0.517073 2:+30548099 MsG0280008388.01.T01:CDS
ACCAACACCTCCGAAGCACC+GGG 0.518291 2:-30547823 None:intergenic
AGCTAAATCTAAACGCGCGA+GGG 0.530491 2:-30547770 None:intergenic
CATTTCCAAATTAACAGTGG+TGG 0.533371 2:+30547952 MsG0280008388.01.T01:CDS
AATGTAAACAGTGTTGGCTG+AGG 0.543013 2:-30547881 None:intergenic
CGCGTCGAATGCAGGTGTCA+CGG 0.544490 2:-30547716 None:intergenic
GTTGCAGTAATCAACTCAGT+TGG 0.549809 2:-30548060 None:intergenic
AATTTACCAAATGGCCCCGC+CGG 0.556510 2:+30547598 MsG0280008388.01.T01:CDS
AAATCCAATATCTGTAAACC+AGG 0.562055 2:-30548015 None:intergenic
TACATTAAAACACTTTACAA+AGG 0.570770 2:+30547898 MsG0280008388.01.T01:CDS
AGCTTTAGTAGTGCTAACCC+TGG 0.575691 2:+30547997 MsG0280008388.01.T01:CDS
GCGCGTTTAGATTTAGCTGG+AGG 0.575819 2:+30547775 MsG0280008388.01.T01:CDS
GGCTGCGGCTAGGCCGTGGT+AGG 0.586379 2:-30547665 None:intergenic
GCACCGGGGTGAGTGTGAAG+TGG 0.596047 2:-30547808 None:intergenic
TGGAAATGCAACAATCCTTG+TGG 0.601071 2:-30547937 None:intergenic
CAGCTAAATCTAAACGCGCG+AGG 0.614597 2:-30547771 None:intergenic
TTGCATTTCCAAATTAACAG+TGG 0.626633 2:+30547949 MsG0280008388.01.T01:CDS
ATTCCACTTCACACTCACCC+CGG 0.645296 2:+30547805 MsG0280008388.01.T01:CDS
GAAAATGACTTCGCCTACCA+CGG 0.651628 2:+30547652 MsG0280008388.01.T01:CDS
AATCCAATATCTGTAAACCA+GGG 0.697449 2:-30548014 None:intergenic
GTCGAATGCAGGTGTCACGG+CGG 0.734661 2:-30547713 None:intergenic
CCAACACCTCCGAAGCACCG+GGG 0.770530 2:-30547822 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TACATTAAAACACTTTACAA+AGG + Chr2:30547898-30547917 MsG0280008388.01.T01:CDS 20.0%
! AGAAAGAAGAGAAAAAATGA+AGG - Chr2:30547536-30547555 None:intergenic 25.0%
!!! TGTTTTAATGTAAACAGTGT+TGG - Chr2:30547890-30547909 None:intergenic 25.0%
AAATCCAATATCTGTAAACC+AGG - Chr2:30548018-30548037 None:intergenic 30.0%
AATCCAATATCTGTAAACCA+GGG - Chr2:30548017-30548036 None:intergenic 30.0%
ACTTTACAAAGGTGATGTTA+TGG + Chr2:30547909-30547928 MsG0280008388.01.T01:CDS 30.0%
GCAGATTACAATTTACCAAA+TGG + Chr2:30547589-30547608 MsG0280008388.01.T01:CDS 30.0%
TTGCATTTCCAAATTAACAG+TGG + Chr2:30547949-30547968 MsG0280008388.01.T01:CDS 30.0%
!!! TCATTTTCGGTTACTTTTGA+TGG - Chr2:30547640-30547659 None:intergenic 30.0%
AATTCCAAGACCGTTTAAAC+CGG - Chr2:30547749-30547768 None:intergenic 35.0%
CATTTCCAAATTAACAGTGG+TGG + Chr2:30547952-30547971 MsG0280008388.01.T01:CDS 35.0%
GCTGTAGTGAAGAAACTTAA+GGG + Chr2:30548099-30548118 MsG0280008388.01.T01:CDS 35.0%
TAACCCTGGTTTACAGATAT+TGG + Chr2:30548011-30548030 MsG0280008388.01.T01:CDS 35.0%
TAGAACCACCACTGTTAATT+TGG - Chr2:30547960-30547979 None:intergenic 35.0%
TGCTGTAGTGAAGAAACTTA+AGG + Chr2:30548098-30548117 MsG0280008388.01.T01:CDS 35.0%
! GATAATGTTTGAGGTGTTTC+CGG - Chr2:30547689-30547708 None:intergenic 35.0%
! GATGTTATGGTTTTTCCACA+AGG + Chr2:30547922-30547941 MsG0280008388.01.T01:CDS 35.0%
! TGGTGTTTTGCAAGAATATC+CGG - Chr2:30547620-30547639 None:intergenic 35.0%
!! AAGAAACTTAAGGGTGTTCT+TGG + Chr2:30548108-30548127 MsG0280008388.01.T01:CDS 35.0%
ATTCAAGGAACAATCTGTGC+TGG + Chr2:30547850-30547869 MsG0280008388.01.T01:CDS 40.0%
GTTGCAGTAATCAACTCAGT+TGG - Chr2:30548063-30548082 None:intergenic 40.0%
TGGAAATGCAACAATCCTTG+TGG - Chr2:30547940-30547959 None:intergenic 40.0%
! TGTTTTGCAAGAATATCCGG+CGG - Chr2:30547617-30547636 None:intergenic 40.0%
!! AAACTTAAGGGTGTTCTTGG+AGG + Chr2:30548111-30548130 MsG0280008388.01.T01:CDS 40.0%
!! AATGTAAACAGTGTTGGCTG+AGG - Chr2:30547884-30547903 None:intergenic 40.0%
!! GAGGTGTTGGTTGTTATTCA+AGG + Chr2:30547835-30547854 MsG0280008388.01.T01:CDS 40.0%
AGCTAAATCTAAACGCGCGA+GGG - Chr2:30547773-30547792 None:intergenic 45.0%
CGTTTAGATTTAGCTGGAGG+TGG + Chr2:30547778-30547797 MsG0280008388.01.T01:CDS 45.0%
GAAAATGACTTCGCCTACCA+CGG + Chr2:30547652-30547671 MsG0280008388.01.T01:CDS 45.0%
! AGCTTTAGTAGTGCTAACCC+TGG + Chr2:30547997-30548016 MsG0280008388.01.T01:CDS 45.0%
! GTTTTGCAAGAATATCCGGC+GGG - Chr2:30547616-30547635 None:intergenic 45.0%
! TTTTGCAAGAATATCCGGCG+GGG - Chr2:30547615-30547634 None:intergenic 45.0%
!! GCGCAATTTGCCGGTTTAAA+CGG + Chr2:30547736-30547755 MsG0280008388.01.T01:CDS 45.0%
!! GGCGGCTTTGATAATGTTTG+AGG - Chr2:30547698-30547717 None:intergenic 45.0%
!! GTGGTAGGCGAAGTCATTTT+CGG - Chr2:30547653-30547672 None:intergenic 45.0%
!! TTTGCCGGTTTAAACGGTCT+TGG + Chr2:30547742-30547761 MsG0280008388.01.T01:CDS 45.0%
AATTTACCAAATGGCCCCGC+CGG + Chr2:30547598-30547617 MsG0280008388.01.T01:CDS 50.0%
ATTCCACTTCACACTCACCC+CGG + Chr2:30547805-30547824 MsG0280008388.01.T01:CDS 50.0%
CAGCTAAATCTAAACGCGCG+AGG - Chr2:30547774-30547793 None:intergenic 50.0%
CTCGCGCGTTTAGATTTAGC+TGG + Chr2:30547772-30547791 MsG0280008388.01.T01:CDS 50.0%
GCGCGTTTAGATTTAGCTGG+AGG + Chr2:30547775-30547794 MsG0280008388.01.T01:CDS 50.0%
AACCAACACCTCCGAAGCAC+CGG - Chr2:30547827-30547846 None:intergenic 55.0%
GCAAATTGCGCGTCGAATGC+AGG - Chr2:30547727-30547746 None:intergenic 55.0%
GCATTCGACGCGCAATTTGC+CGG + Chr2:30547727-30547746 MsG0280008388.01.T01:CDS 55.0%
! GTTTGAGGTGTTTCCGGCTG+CGG - Chr2:30547683-30547702 None:intergenic 55.0%
!! AAGGGTGTTCTTGGAGGCAG+TGG + Chr2:30548117-30548136 MsG0280008388.01.T01:CDS 55.0%
CGCGTCGAATGCAGGTGTCA+CGG - Chr2:30547719-30547738 None:intergenic 60.0%
GAATATCCGGCGGGGCCATT+TGG - Chr2:30547607-30547626 None:intergenic 60.0%
TCACACTCACCCCGGTGCTT+CGG + Chr2:30547813-30547832 MsG0280008388.01.T01:CDS 60.0%
! ACCAACACCTCCGAAGCACC+GGG - Chr2:30547826-30547845 None:intergenic 60.0%
! GTCGAATGCAGGTGTCACGG+CGG - Chr2:30547716-30547735 None:intergenic 60.0%
AGGTGTTTCCGGCTGCGGCT+AGG - Chr2:30547678-30547697 None:intergenic 65.0%
GCACCGGGGTGAGTGTGAAG+TGG - Chr2:30547811-30547830 None:intergenic 65.0%
!! CCAACACCTCCGAAGCACCG+GGG - Chr2:30547825-30547844 None:intergenic 65.0%
CACTCACCCCGGTGCTTCGG+AGG + Chr2:30547816-30547835 MsG0280008388.01.T01:CDS 70.0%
TACCACGGCCTAGCCGCAGC+CGG + Chr2:30547667-30547686 MsG0280008388.01.T01:CDS 70.0%
! CCCCGGTGCTTCGGAGGTGT+TGG + Chr2:30547822-30547841 MsG0280008388.01.T01:CDS 70.0%
GGCTGCGGCTAGGCCGTGGT+AGG - Chr2:30547668-30547687 None:intergenic 75.0%
TTCCGGCTGCGGCTAGGCCG+TGG - Chr2:30547672-30547691 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr2 gene 30547511 30548143 30547511 ID=MsG0280008388.01;Name=MsG0280008388.01
Chr2 mRNA 30547511 30548143 30547511 ID=MsG0280008388.01.T01;Parent=MsG0280008388.01;Name=MsG0280008388.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|210
Chr2 exon 30547511 30548143 30547511 ID=MsG0280008388.01.T01:exon:5859;Parent=MsG0280008388.01.T01
Chr2 CDS 30547511 30548143 30547511 ID=MsG0280008388.01.T01:cds;Parent=MsG0280008388.01.T01
Gene Sequence

>MsG0280008388.01.T01

ATGAAGATGATTGTAGCTATCTCCTTCATTTTTTCTCTTCTTTCTCTTTCTCATGCATCAGTAGTAGATTTCTGCGTAGCAGATTACAATTTACCAAATGGCCCCGCCGGATATTCTTGCAAAACACCATCAAAAGTAACCGAAAATGACTTCGCCTACCACGGCCTAGCCGCAGCCGGAAACACCTCAAACATTATCAAAGCCGCCGTGACACCTGCATTCGACGCGCAATTTGCCGGTTTAAACGGTCTTGGAATTTCCCTCGCGCGTTTAGATTTAGCTGGAGGTGGAGTTATTCCACTTCACACTCACCCCGGTGCTTCGGAGGTGTTGGTTGTTATTCAAGGAACAATCTGTGCTGGTTTTGTTTCCTCAGCCAACACTGTTTACATTAAAACACTTTACAAAGGTGATGTTATGGTTTTTCCACAAGGATTGTTGCATTTCCAAATTAACAGTGGTGGTTCTAATGCACTTGCTTTTGTTAGCTTTAGTAGTGCTAACCCTGGTTTACAGATATTGGATTTTGCTTTGTTTAAAAGTGATTTTCCAACTGAGTTGATTACTGCAACTACTTTTATTGATGCTGCTGTAGTGAAGAAACTTAAGGGTGTTCTTGGAGGCAGTGGTTAA

Protein sequence

>MsG0280008388.01.T01

MKMIVAISFIFSLLSLSHASVVDFCVADYNLPNGPAGYSCKTPSKVTENDFAYHGLAAAGNTSNIIKAAVTPAFDAQFAGLNGLGISLARLDLAGGGVIPLHTHPGASEVLVVIQGTICAGFVSSANTVYIKTLYKGDVMVFPQGLLHFQINSGGSNALAFVSFSSANPGLQILDFALFKSDFPTELITATTFIDAAVVKKLKGVLGGSG*