AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780038616.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780038616.01.T02 MTR_7g058760 96.137 466 18 0 1 466 1 466 0.0 937
MsG0780038616.01.T02 MTR_7g058760 95.494 466 18 1 1 466 1 463 0.0 925
MsG0780038616.01.T01 MTR_7g058760 96.137 466 18 0 1 466 1 466 0.0 937
MsG0780038616.01.T01 MTR_7g058760 95.494 466 18 1 1 466 1 463 0.0 925
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780038616.01.T02 AT5G48830 39.024 451 262 6 23 466 18 462 1.91e-101 313
MsG0780038616.01.T02 AT5G48830 38.852 453 257 7 23 461 18 464 1.58e-99 308
MsG0780038616.01.T01 AT5G48830 39.024 451 262 6 23 466 18 462 1.91e-101 313
MsG0780038616.01.T01 AT5G48830 38.852 453 257 7 23 461 18 464 1.58e-99 308

Find 13 sgRNAs with CRISPR-Local

Find 590 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGAAATTCGTAGTCTGATT+CGG 0.344782 7:+50001302 None:intergenic
ATATGCAGCTTAGCACAAAA+TGG 0.362160 7:+50001359 None:intergenic
TAATTTCTGAATTGTGTTGC+AGG 0.362731 7:-50001439 MsG0780038616.01.T02:intron
TGAAATTCGTAGTCTGATTC+GGG 0.385125 7:+50001303 None:intergenic
GGGAAGGGTGAATGTGTAAA+AGG 0.392111 7:+50001323 None:intergenic
TATGCAGCTTAGCACAAAAT+GGG 0.433593 7:+50001360 None:intergenic
AGCTGCATATGCAGCAGAGA+AGG 0.488506 7:-50001346 MsG0780038616.01.T02:CDS
TTCGTAGTCTGATTCGGGAA+GGG 0.604451 7:+50001308 None:intergenic
CGAATTTCAAGACTGCTCCA+AGG 0.605240 7:-50001289 MsG0780038616.01.T02:intron
ATTCGTAGTCTGATTCGGGA+AGG 0.615676 7:+50001307 None:intergenic
ATGCAGCTTAGCACAAAATG+GGG 0.668849 7:+50001361 None:intergenic
CAGCTTAGCACAAAATGGGG+AGG 0.672948 7:+50001364 None:intergenic
TTTCTGAATTGTGTTGCAGG+CGG 0.745149 7:-50001436 MsG0780038616.01.T02:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTTTTTATTTTTATTTTTTC+TGG - Chr7:49997435-49997454 MsG0780038616.01.T02:CDS 10.0%
!!! TTTTCAATTTTATTTATCAA+TGG + Chr7:49997189-49997208 None:intergenic 10.0%
!! AAAAAATATCTAAATACCAA+AGG + Chr7:49997547-49997566 None:intergenic 15.0%
!! AGATAATTTAATAAAACATG+TGG + Chr7:49997241-49997260 None:intergenic 15.0%
!! TTAAAATTAGATGTTAAGAA+TGG + Chr7:49998505-49998524 None:intergenic 15.0%
!!! AATTGAGATTTAGAATAATT+GGG - Chr7:49999023-49999042 MsG0780038616.01.T02:intron 15.0%
!!! CTATTTTTTATTTTTTTTGG+TGG - Chr7:49993989-49994008 MsG0780038616.01.T02:intron 15.0%
!!! CTGCTATTTTTTATTTTTTT+TGG - Chr7:49993986-49994005 MsG0780038616.01.T02:intron 15.0%
!!! CTGTTAATTTTACAATATTA+TGG - Chr7:49993948-49993967 MsG0780038616.01.T02:intron 15.0%
!!! GTATAAATTATTTAGAATGT+TGG - Chr7:49994133-49994152 MsG0780038616.01.T02:intron 15.0%
!!! TATAACTAAATCTTCTAAAA+TGG + Chr7:49998175-49998194 None:intergenic 15.0%
!!! TCACTTTAAAGAAAAAATTA+TGG - Chr7:49996405-49996424 MsG0780038616.01.T02:intron 15.0%
!!! TTAATTGTTAAGTTTTTTTC+AGG - Chr7:49995949-49995968 MsG0780038616.01.T02:intron 15.0%
!!! TTTATCCAAATTTTAAATAG+TGG + Chr7:50001379-50001398 None:intergenic 15.0%
!!! TTTTTATTTTTGACATATGA+TGG - Chr7:49995200-49995219 MsG0780038616.01.T02:intron 15.0%
!!! TTTTTCCACTATTTAAAATT+TGG - Chr7:50001371-50001390 MsG0780038616.01.T02:CDS 15.0%
!! AAAAGCTTATAAGAATTGTT+AGG - Chr7:50000877-50000896 MsG0780038616.01.T02:intron 20.0%
!! AAATCAGAGTAATATGAAAA+TGG + Chr7:49996318-49996337 None:intergenic 20.0%
!! AAGTTAACAACAACATATAA+TGG + Chr7:49994299-49994318 None:intergenic 20.0%
!! AATGTATGAGAAAATAAATG+CGG + Chr7:49993301-49993320 None:intergenic 20.0%
!! AATTCGTAAAATCTATTGAA+AGG + Chr7:49999256-49999275 None:intergenic 20.0%
!! ACTAGTAGAATTATGAATAA+AGG - Chr7:49999317-49999336 MsG0780038616.01.T02:intron 20.0%
!! ATAGGCTAAAAACAAATAAA+AGG + Chr7:49997990-49998009 None:intergenic 20.0%
!! ATCAAAAGAAAAATATGAGA+TGG + Chr7:49998028-49998047 None:intergenic 20.0%
!! TAATGGCTGTAATAAAATAT+TGG - Chr7:49998972-49998991 MsG0780038616.01.T02:intron 20.0%
!! TACAAAATATTGTGAAATAG+CGG - Chr7:49994532-49994551 MsG0780038616.01.T02:intron 20.0%
!! TACATGTATCAATAAATGTT+TGG - Chr7:49996132-49996151 MsG0780038616.01.T02:intron 20.0%
!! TAGGCTAAAAACAAATAAAA+GGG + Chr7:49997989-49998008 None:intergenic 20.0%
!! TTAATAATATCTGTCTACAT+TGG - Chr7:49997954-49997973 MsG0780038616.01.T02:intron 20.0%
!! TTACGTTTAGTGTTATAAAT+TGG - Chr7:49993647-49993666 MsG0780038616.01.T02:intron 20.0%
!! TTGGAAATGAATTATGAAAA+AGG + Chr7:49995856-49995875 None:intergenic 20.0%
!! TTTGTACTAAATATTATCAC+AGG + Chr7:49994518-49994537 None:intergenic 20.0%
!!! AAGAAATGAACACTTTTTTT+TGG - Chr7:49999628-49999647 MsG0780038616.01.T02:intron 20.0%
!!! AGAATTTTGGAACAAATATT+TGG - Chr7:49999100-49999119 MsG0780038616.01.T02:intron 20.0%
!!! ATTATATGTTGTTGTTAACT+TGG - Chr7:49994298-49994317 MsG0780038616.01.T02:intron 20.0%
!!! ATTATGTTGTTTACACATAT+TGG - Chr7:49998357-49998376 MsG0780038616.01.T02:intron 20.0%
!!! CAATTGAGATTTAGAATAAT+TGG - Chr7:49999022-49999041 MsG0780038616.01.T02:intron 20.0%
!!! CTAAAGTCTTCTTTTTATTT+TGG + Chr7:49997772-49997791 None:intergenic 20.0%
!!! GTTTACATTTTGCTTTTATA+GGG - Chr7:49999049-49999068 MsG0780038616.01.T02:intron 20.0%
!!! TAATAAAACATGTGGATTAT+TGG + Chr7:49997233-49997252 None:intergenic 20.0%
!!! TATGGAATTTTACTAGAAAT+GGG - Chr7:49996449-49996468 MsG0780038616.01.T02:intron 20.0%
!!! TATGTTATTTTGGTATGATT+TGG - Chr7:49995521-49995540 MsG0780038616.01.T02:intron 20.0%
!!! TGTCAAAATTATTTTATCCT+TGG + Chr7:49998695-49998714 None:intergenic 20.0%
!!! TTATGGAATTTTACTAGAAA+TGG - Chr7:49996448-49996467 MsG0780038616.01.T02:intron 20.0%
!!! TTTTTTATTTTTTTTGGTGG+TGG - Chr7:49993992-49994011 MsG0780038616.01.T02:intron 20.0%
! AAAACAGTAAATAAGTGTCT+AGG + Chr7:49995720-49995739 None:intergenic 25.0%
! AAAAGAAACTGATTAACAAC+TGG + Chr7:49995026-49995045 None:intergenic 25.0%
! AAACTATGTATTGAGAAAAC+AGG + Chr7:49994700-49994719 None:intergenic 25.0%
! AAAGGCTTATAAGAATTGTT+AGG - Chr7:50000399-50000418 MsG0780038616.01.T02:intron 25.0%
! AACTATGTATTGAGAAAACA+GGG + Chr7:49994699-49994718 None:intergenic 25.0%
! AAGTATATTGCTCACTTATA+TGG - Chr7:49995052-49995071 MsG0780038616.01.T02:intron 25.0%
! AATAATGATGCTAAAAACCT+TGG + Chr7:49993508-49993527 None:intergenic 25.0%
! AATTTCAACATCTGAATTGA+AGG + Chr7:49993738-49993757 None:intergenic 25.0%
! AGAAGAATGAATAAGATCAA+AGG - Chr7:49999393-49999412 MsG0780038616.01.T02:CDS 25.0%
! AGCAAAAGGAAAATATAGAA+AGG + Chr7:49994821-49994840 None:intergenic 25.0%
! AGTAAATTACTGATCTAAGT+TGG - Chr7:49996185-49996204 MsG0780038616.01.T02:intron 25.0%
! ATAAATGCGGAAAAATGAAA+CGG + Chr7:49993288-49993307 None:intergenic 25.0%
! ATCTGTATTCAGAATTACTT+TGG - Chr7:49997368-49997387 MsG0780038616.01.T02:intron 25.0%
! ATGTACTTTCTAAATTTACC+TGG + Chr7:49996117-49996136 None:intergenic 25.0%
! ATTCAACACTGTATATATCA+TGG - Chr7:49994171-49994190 MsG0780038616.01.T02:intron 25.0%
! ATTTACTCAAATGTACCTAA+TGG + Chr7:49996172-49996191 None:intergenic 25.0%
! CATAACAACGTTACATTAAA+TGG + Chr7:49997463-49997482 None:intergenic 25.0%
! CTAATTGAAAAACATCACAA+TGG - Chr7:49999467-49999486 MsG0780038616.01.T02:CDS 25.0%
! CTGACTCTAATTCAAATATA+TGG + Chr7:49999360-49999379 None:intergenic 25.0%
! GAAGAATGAATAAGATCAAA+GGG - Chr7:49999394-49999413 MsG0780038616.01.T02:CDS 25.0%
! GGAATAAGAGATAAATGTAT+TGG + Chr7:49998890-49998909 None:intergenic 25.0%
! GTCAAATTATGTATTAGATG+TGG - Chr7:49995291-49995310 MsG0780038616.01.T02:intron 25.0%
! GTGGAGATATCAATAAATAA+GGG - Chr7:49996859-49996878 MsG0780038616.01.T02:intron 25.0%
! TAAATGTTTCAAATGACTTC+TGG - Chr7:49995574-49995593 MsG0780038616.01.T02:intron 25.0%
! TATTACAGCCATTAATTAGT+TGG + Chr7:49998966-49998985 None:intergenic 25.0%
! TATTGTAGTTGTTAGATACT+TGG - Chr7:49996804-49996823 MsG0780038616.01.T02:intron 25.0%
! TATTTCTCCTTTATTGTAAC+TGG + Chr7:50001191-50001210 None:intergenic 25.0%
! TCAATACCTTTATCTTTACT+GGG - Chr7:49999418-49999437 MsG0780038616.01.T02:CDS 25.0%
! TCTCAAAAAACATGAAACTA+TGG + Chr7:49999283-49999302 None:intergenic 25.0%
! TGAAAATTCACAATCTTTCT+TGG - Chr7:49999821-49999840 MsG0780038616.01.T02:CDS 25.0%
! TTATTCATTCTTCTGTTGAA+TGG + Chr7:49999387-49999406 None:intergenic 25.0%
! TTATTGTACAGAACATTACA+AGG - Chr7:49997332-49997351 MsG0780038616.01.T02:intron 25.0%
! TTGAAATACAAGATAATCGT+TGG + Chr7:49998835-49998854 None:intergenic 25.0%
! TTTCATATTACTCTGATTTC+AGG - Chr7:49996319-49996338 MsG0780038616.01.T02:intron 25.0%
!! AACTGTTTATTGCTATTACT+GGG - Chr7:49994632-49994651 MsG0780038616.01.T02:intron 25.0%
!! AAGTGTTCATTTCTTGTTAT+TGG + Chr7:49999623-49999642 None:intergenic 25.0%
!! AATTCTTTTGTGAACAAATG+AGG - Chr7:49999502-49999521 MsG0780038616.01.T02:CDS 25.0%
!! ACAATAAATTTCTAAGAACC+AGG - Chr7:49996220-49996239 MsG0780038616.01.T02:intron 25.0%
!! CAAAACATATTTTCAGTACA+AGG + Chr7:49997803-49997822 None:intergenic 25.0%
!! CAATAAATTTCTAAGAACCA+GGG - Chr7:49996221-49996240 MsG0780038616.01.T02:intron 25.0%
!! CTTTTCTCTGTAAAATCTTA+AGG - Chr7:49996996-49997015 MsG0780038616.01.T02:intron 25.0%
!! GAAAGTATAGATGAAAGTTT+CGG + Chr7:50001408-50001427 None:intergenic 25.0%
!! GTACTGAAAATATGTTTTGT+TGG - Chr7:49997804-49997823 MsG0780038616.01.T02:intron 25.0%
!! GTTAATCAGTTTCTTTTGAT+GGG - Chr7:49995029-49995048 MsG0780038616.01.T02:intron 25.0%
!! TGTTAATCAGTTTCTTTTGA+TGG - Chr7:49995028-49995047 MsG0780038616.01.T02:intron 25.0%
!! TTACTTTGGTATCTTACTTT+TGG - Chr7:49997382-49997401 MsG0780038616.01.T02:intron 25.0%
!!! AATTTTGACAAGTTGTAACT+TGG - Chr7:49995544-49995563 MsG0780038616.01.T02:intron 25.0%
!!! AGCATTAATTATAGTCTTGT+AGG - Chr7:49996837-49996856 MsG0780038616.01.T02:intron 25.0%
!!! AGGTAAATTGAGAGTATTTT+GGG - Chr7:50001253-50001272 MsG0780038616.01.T02:intron 25.0%
!!! ATGCTACTTGTATTGATTTA+GGG - Chr7:49998937-49998956 MsG0780038616.01.T02:intron 25.0%
!!! ATGGCATACATTTTTTAGTT+TGG + Chr7:49995875-49995894 None:intergenic 25.0%
!!! ATTAATTATAGTCTTGTAGG+TGG - Chr7:49996840-49996859 MsG0780038616.01.T02:intron 25.0%
!!! CAAAACTTTGTGTTTTTTCA+TGG - Chr7:49997117-49997136 MsG0780038616.01.T02:intron 25.0%
!!! CGTTTACATTTTGCTTTTAT+AGG - Chr7:49999048-49999067 MsG0780038616.01.T02:intron 25.0%
!!! CTTTTTAGTGAACATTTCTA+TGG - Chr7:49998423-49998442 MsG0780038616.01.T02:intron 25.0%
!!! TCTCAATACATAGTTTTGAT+AGG - Chr7:49994704-49994723 MsG0780038616.01.T02:intron 25.0%
!!! TTTTGCTTTTATAGGGTAAT+TGG - Chr7:49999056-49999075 MsG0780038616.01.T02:intron 25.0%
!!! TTTTTTCCCAGTAAAGATAA+AGG + Chr7:49999427-49999446 None:intergenic 25.0%
AAAAATGAAACGGTGATTTG+AGG + Chr7:49993278-49993297 None:intergenic 30.0%
AAAATGAAACGGTGATTTGA+GGG + Chr7:49993277-49993296 None:intergenic 30.0%
AAATTCACAATCTTTCTTGG+AGG - Chr7:49999824-49999843 MsG0780038616.01.T02:CDS 30.0%
AAGATGCATCTTGTTGATAT+GGG + Chr7:50000430-50000449 None:intergenic 30.0%
AAGTAAAACAAATAGCTTGG+AGG - Chr7:49998257-49998276 MsG0780038616.01.T02:intron 30.0%
AATTCACAATCTTTCTTGGA+GGG - Chr7:49999825-49999844 MsG0780038616.01.T02:CDS 30.0%
ACAACACAAACATGAAATCT+TGG + Chr7:49994430-49994449 None:intergenic 30.0%
ACAATATAACTCATGTGACA+TGG + Chr7:50001604-50001623 None:intergenic 30.0%
ACAGAATTTAAAGACAACGT+TGG + Chr7:50001230-50001249 None:intergenic 30.0%
ACTCCAAAAATTACGTAATG+AGG - Chr7:49998308-49998327 MsG0780038616.01.T02:intron 30.0%
ACTTCAGAAAAAACTTTGAC+TGG + Chr7:49996019-49996038 None:intergenic 30.0%
AGAAGATTTAGTTATAGCTC+TGG - Chr7:49998179-49998198 MsG0780038616.01.T02:intron 30.0%
AGAGAAAAAAAGATTGAGAG+TGG - Chr7:49994235-49994254 MsG0780038616.01.T02:intron 30.0%
AGCATTTATGTTTGCAAATG+AGG - Chr7:49998714-49998733 MsG0780038616.01.T02:CDS 30.0%
AGGTACAAATTTCATGCTTA+TGG - Chr7:49998328-49998347 MsG0780038616.01.T02:intron 30.0%
AGTTCTTTGACATTGTTCTT+AGG - Chr7:49997267-49997286 MsG0780038616.01.T02:intron 30.0%
ATAAGCAAAGATGCCTAAAT+AGG - Chr7:49997051-49997070 MsG0780038616.01.T02:intron 30.0%
ATCAATACAAGTAGCATCAA+TGG + Chr7:49998934-49998953 None:intergenic 30.0%
ATGATGCTTGAAAAAGTGAA+AGG - Chr7:49997301-49997320 MsG0780038616.01.T02:intron 30.0%
ATTATAACACAGTTGCATAG+TGG - Chr7:49994565-49994584 MsG0780038616.01.T02:intron 30.0%
ATTGGAAAGAAATAAGACCT+GGG + Chr7:49998872-49998891 None:intergenic 30.0%
ATTTCTCAATGCCCATAAAA+CGG - Chr7:50001637-50001656 MsG0780038616.01.T02:five_prime_UTR 30.0%
CATGTTTGTCTTTGTAAGAT+AGG + Chr7:49997927-49997946 None:intergenic 30.0%
CCATTATTTAAGCCCATAAA+AGG - Chr7:49998530-49998549 MsG0780038616.01.T02:intron 30.0%
CTAATTCCCCACAATAAAAT+GGG + Chr7:49999145-49999164 None:intergenic 30.0%
CTATGCCAATGCAATTTAAA+GGG + Chr7:49994959-49994978 None:intergenic 30.0%
CTCAATACCTTTATCTTTAC+TGG - Chr7:49999417-49999436 MsG0780038616.01.T02:CDS 30.0%
GAAAGGCTATGTTCTAATAA+AGG + Chr7:49999239-49999258 None:intergenic 30.0%
GAAGATGCAAATTGTTTAAC+TGG - Chr7:49994257-49994276 MsG0780038616.01.T02:intron 30.0%
GGAAAAAGGATGAGAAATTA+GGG + Chr7:49993255-49993274 None:intergenic 30.0%
GGTGGAGATATCAATAAATA+AGG - Chr7:49996858-49996877 MsG0780038616.01.T02:intron 30.0%
GTCAAGTAAAACAAATAGCT+TGG - Chr7:49998254-49998273 MsG0780038616.01.T02:intron 30.0%
TAAAAATTACTCACCGTCTT+CGG - Chr7:49994928-49994947 MsG0780038616.01.T02:intron 30.0%
TAATTCCCCACAATAAAATG+GGG + Chr7:49999144-49999163 None:intergenic 30.0%
TAATTTCTGAATTGTGTTGC+AGG - Chr7:49993338-49993357 MsG0780038616.01.T02:CDS 30.0%
TAGAAGGTCAAACTCATTAT+AGG - Chr7:49996507-49996526 MsG0780038616.01.T02:CDS 30.0%
TAGGGATTCCAACTAATTAA+TGG - Chr7:49998955-49998974 MsG0780038616.01.T02:intron 30.0%
TATGTTTCCAACGAGAAAAA+TGG + Chr7:49997748-49997767 None:intergenic 30.0%
TATTGGAAAGAAATAAGACC+TGG + Chr7:49998873-49998892 None:intergenic 30.0%
TCAGTTTCCAGTTACAATAA+AGG - Chr7:50001181-50001200 MsG0780038616.01.T02:intron 30.0%
TCTAAATGCATTAGAGAAAG+AGG - Chr7:49995336-49995355 MsG0780038616.01.T02:intron 30.0%
TGACAAGTAATATGAGACAA+GGG + Chr7:49996696-49996715 None:intergenic 30.0%
TGATCCATTGATATTCTAGA+AGG + Chr7:49995751-49995770 None:intergenic 30.0%
TGATGCTTGAAAAAGTGAAA+GGG - Chr7:49997302-49997321 MsG0780038616.01.T02:intron 30.0%
TGGGTATATTTCTTTGCAAT+TGG - Chr7:49998777-49998796 MsG0780038616.01.T02:CDS 30.0%
TGGTACCTGAATCAATTATA+AGG + Chr7:49998808-49998827 None:intergenic 30.0%
TGTTACACCAACTTTCTTAT+AGG - Chr7:50001106-50001125 MsG0780038616.01.T02:intron 30.0%
TTACAAAGACAAACATGTCT+TGG - Chr7:49997930-49997949 MsG0780038616.01.T02:intron 30.0%
TTACACCAACTTAATCACAT+TGG + Chr7:49995900-49995919 None:intergenic 30.0%
TTACTGGGAAAAAAAGATAC+AGG - Chr7:49999433-49999452 MsG0780038616.01.T02:CDS 30.0%
TTATAACATCGAGAAAGCAA+TGG + Chr7:49996903-49996922 None:intergenic 30.0%
TTCATCTATACTTTCGTTTC+AGG - Chr7:50001413-50001432 MsG0780038616.01.T02:five_prime_UTR 30.0%
TTGAAATTCGTAGTCTGATT+CGG + Chr7:49993478-49993497 None:intergenic 30.0%
TTGACAAGTAATATGAGACA+AGG + Chr7:49996697-49996716 None:intergenic 30.0%
TTGTCTTTAAATTCTGTGTC+AGG - Chr7:50001233-50001252 MsG0780038616.01.T02:intron 30.0%
TTGTTAAATAGCTGTCATAG+CGG - Chr7:49994446-49994465 MsG0780038616.01.T02:intron 30.0%
TTTAGGCATCTTTGCTTATT+TGG + Chr7:49997050-49997069 None:intergenic 30.0%
TTTAGTGAACATTTCTATGG+CGG - Chr7:49998426-49998445 MsG0780038616.01.T02:intron 30.0%
! AAATTCTACGCATCTTTTCT+CGG - Chr7:49997577-49997596 MsG0780038616.01.T02:intron 30.0%
! AACAAGATGCATCTTCTTTT+CGG - Chr7:50000435-50000454 MsG0780038616.01.T02:intron 30.0%
! AAGGAGTTTTTCCTTGTAAA+AGG - Chr7:49996082-49996101 MsG0780038616.01.T02:intron 30.0%
! AATTCCTTTGTCCGTTTTAT+GGG + Chr7:50001651-50001670 None:intergenic 30.0%
! ACATTGATTGCAAAATCTAC+TGG - Chr7:49996587-49996606 MsG0780038616.01.T02:CDS 30.0%
! ACCATTTTCTTCGAGATATT+GGG - Chr7:49999187-49999206 MsG0780038616.01.T02:intron 30.0%
! AGAATTGTTCTTTTGATCAC+GGG + Chr7:49995108-49995127 None:intergenic 30.0%
! AGGAAATTGGATCAGAATTT+TGG - Chr7:49999087-49999106 MsG0780038616.01.T02:intron 30.0%
! CAGAATTGTTCTTTTGATCA+CGG + Chr7:49995109-49995128 None:intergenic 30.0%
! CCTTTTATGGGCTTAAATAA+TGG + Chr7:49998533-49998552 None:intergenic 30.0%
! GAACTGTTTATTGCTATTAC+TGG - Chr7:49994631-49994650 MsG0780038616.01.T02:intron 30.0%
! GTACCTCATTACGTAATTTT+TGG + Chr7:49998314-49998333 None:intergenic 30.0%
! GTTTAGAGTCTATTCCTTAA+TGG + Chr7:49999596-49999615 None:intergenic 30.0%
! TAATTCCTTTGTCCGTTTTA+TGG + Chr7:50001652-50001671 None:intergenic 30.0%
! TCCAAAGTTAAGGTTACTTT+GGG - Chr7:49995426-49995445 MsG0780038616.01.T02:intron 30.0%
! TTCAAATATATGGTGCTAAG+TGG + Chr7:49999350-49999369 None:intergenic 30.0%
!! AACTTTTCCATTTTTCTCGT+TGG - Chr7:49997738-49997757 MsG0780038616.01.T02:intron 30.0%
!! AATAAAATATTGGTGCCACA+TGG - Chr7:49998982-49999001 MsG0780038616.01.T02:intron 30.0%
!! AGTTGCACAAGTTTTATCAA+TGG - Chr7:49993378-49993397 MsG0780038616.01.T02:intron 30.0%
!! ATGTATCAAGTTAGCTTGTT+TGG - Chr7:49996363-49996382 MsG0780038616.01.T02:intron 30.0%
!! CAGTCATCATTATTTTGTCA+GGG - Chr7:49998104-49998123 MsG0780038616.01.T02:intron 30.0%
!! CTGCACATGTTATGTTATTT+TGG - Chr7:49995511-49995530 MsG0780038616.01.T02:intron 30.0%
!! GATGCTACTTGTATTGATTT+AGG - Chr7:49998936-49998955 MsG0780038616.01.T02:intron 30.0%
!! GTTTTGATAGGTAGTAAGTA+TGG - Chr7:49994716-49994735 MsG0780038616.01.T02:intron 30.0%
!! GTTTTGTTGGCCAAAAAATA+AGG - Chr7:49997817-49997836 MsG0780038616.01.T02:intron 30.0%
!! TCTTCCTTCTAGAATATCAA+TGG - Chr7:49995744-49995763 MsG0780038616.01.T02:intron 30.0%
!! TGTATCAAGTTAGCTTGTTT+GGG - Chr7:49996364-49996383 MsG0780038616.01.T02:intron 30.0%
!! TTCTAAAATGGAAACACCAT+GGG + Chr7:49998163-49998182 None:intergenic 30.0%
!! TTGGTATCTTACTTTTGGTT+TGG - Chr7:49997387-49997406 MsG0780038616.01.T02:CDS 30.0%
!! TTGTGAAATAGCGGATATAA+TGG - Chr7:49994541-49994560 MsG0780038616.01.T02:intron 30.0%
!!! CAGGTAAATTGAGAGTATTT+TGG - Chr7:50001252-50001271 MsG0780038616.01.T02:intron 30.0%
!!! GAGTATTTTGGGTTCTATTT+TGG - Chr7:50001264-50001283 MsG0780038616.01.T02:intron 30.0%
!!! GCTTGAATTTTTTCTGTGTA+AGG + Chr7:49994884-49994903 None:intergenic 30.0%
!!! TAGCACTCTTCCTTATTTTT+TGG + Chr7:49997830-49997849 None:intergenic 30.0%
!!! TGAACAAATGTTATTTTCCG+TGG + Chr7:49993900-49993919 None:intergenic 30.0%
!!! TGGCATTTTGACTCAATAAT+AGG + Chr7:49998008-49998027 None:intergenic 30.0%
AAAAATTACTCACCGTCTTC+GGG - Chr7:49994929-49994948 MsG0780038616.01.T02:intron 35.0%
AAACTGACAAACAAAGTTGG+TGG - Chr7:50001550-50001569 MsG0780038616.01.T02:intron 35.0%
AAACTTTGTCTTGAGGAGTT+AGG - Chr7:49999861-49999880 MsG0780038616.01.T02:CDS 35.0%
AAATGAAACGGTGATTTGAG+GGG + Chr7:49993276-49993295 None:intergenic 35.0%
AAATTCAAGCCGAGTGTATT+TGG - Chr7:49994894-49994913 MsG0780038616.01.T02:intron 35.0%
AAATTGACCCGTTAAGACTT+AGG - Chr7:49993099-49993118 MsG0780038616.01.T02:CDS 35.0%
AACTTTGTCTTGAGGAGTTA+GGG - Chr7:49999862-49999881 MsG0780038616.01.T02:CDS 35.0%
AAGAGTGGTATGAACCAAAT+GGG - Chr7:49999694-49999713 MsG0780038616.01.T02:CDS 35.0%
AAGATTGTGATAGTCTGAAG+TGG - Chr7:49995636-49995655 MsG0780038616.01.T02:intron 35.0%
AATTCAAGCCGAGTGTATTT+GGG - Chr7:49994895-49994914 MsG0780038616.01.T02:intron 35.0%
ACAACCAAATTCATGATACC+AGG + Chr7:49994788-49994807 None:intergenic 35.0%
ACAATGTTCTGCATTGCTAA+GGG - Chr7:50000024-50000043 MsG0780038616.01.T02:intron 35.0%
ACCTAATGGTACTAGTAGAA+AGG + Chr7:49996158-49996177 None:intergenic 35.0%
ACCTATGCTTTCAGAAACTA+TGG + Chr7:49997887-49997906 None:intergenic 35.0%
ACTTCCACATGTTGTCATAT+CGG + Chr7:49999906-49999925 None:intergenic 35.0%
ACTTTCTTATAGGCTAGTGA+AGG - Chr7:50001116-50001135 MsG0780038616.01.T02:intron 35.0%
AGCATCAATGGACGAAAATT+GGG + Chr7:49998922-49998941 None:intergenic 35.0%
AGCTAACTTGATACATCTCA+TGG + Chr7:49996359-49996378 None:intergenic 35.0%
AGTTTCTTTCTCCACAACAA+AGG - Chr7:50000119-50000138 MsG0780038616.01.T02:intron 35.0%
ATATGCAGCTTAGCACAAAA+TGG + Chr7:49993421-49993440 None:intergenic 35.0%
ATATTATCACAGGACAGTAG+TGG + Chr7:49994508-49994527 None:intergenic 35.0%
ATATTGCAAATTGCAGACCA+CGG - Chr7:49993880-49993899 MsG0780038616.01.T02:intron 35.0%
ATATTGCTCACTTATATGGC+TGG - Chr7:49995056-49995075 MsG0780038616.01.T02:intron 35.0%
ATCTATACTTTCGTTTCAGG+TGG - Chr7:50001416-50001435 MsG0780038616.01.T02:five_prime_UTR 35.0%
ATGCAACAACACAATGAGAT+TGG - Chr7:49999757-49999776 MsG0780038616.01.T02:CDS 35.0%
ATGGTTAAAACTACCTTGGT+GGG + Chr7:49999739-49999758 None:intergenic 35.0%
ATTAGAGAAAGAGGCTTATG+CGG - Chr7:49995345-49995364 MsG0780038616.01.T02:intron 35.0%
ATTGCCTGGTATCATGAATT+TGG - Chr7:49994781-49994800 MsG0780038616.01.T02:intron 35.0%
CAACTTAATCACATTGGCAA+TGG + Chr7:49995894-49995913 None:intergenic 35.0%
CATTGCCAATGTGATTAAGT+TGG - Chr7:49995892-49995911 MsG0780038616.01.T02:intron 35.0%
CCTATGCCAATGCAATTTAA+AGG + Chr7:49994960-49994979 None:intergenic 35.0%
CCTGAATCAATTATAAGGCA+AGG + Chr7:49998803-49998822 None:intergenic 35.0%
CCTGACAAAATAATGATGAC+TGG + Chr7:49998106-49998125 None:intergenic 35.0%
GAAATACTTTCTGCAGCAAA+AGG + Chr7:49994835-49994854 None:intergenic 35.0%
GAAGATGCATCTTGTTGATA+TGG + Chr7:50000431-50000450 None:intergenic 35.0%
GACAAGTAATATGAGACAAG+GGG + Chr7:49996695-49996714 None:intergenic 35.0%
GACAATGCATACTATATGCA+AGG + Chr7:49994037-49994056 None:intergenic 35.0%
GATGCTTGAAAAAGTGAAAG+GGG - Chr7:49997303-49997322 MsG0780038616.01.T02:intron 35.0%
GCAATGAAGGAAGTGAAAAA+GGG - Chr7:50000069-50000088 MsG0780038616.01.T02:intron 35.0%
GCATTCCCTTTAAATTGCAT+TGG - Chr7:49994951-49994970 MsG0780038616.01.T02:intron 35.0%
GCTAATTCCCCACAATAAAA+TGG + Chr7:49999146-49999165 None:intergenic 35.0%
GCTATAGCACTATTGCATAA+TGG - Chr7:49994470-49994489 MsG0780038616.01.T02:intron 35.0%
GGAATAGAAACTTTGTCTTG+AGG - Chr7:49999854-49999873 MsG0780038616.01.T02:CDS 35.0%
GGGAAAAAGGATGAGAAATT+AGG + Chr7:49993256-49993275 None:intergenic 35.0%
GTAAGGGTAAGAAAGTCAAA+TGG - Chr7:49995169-49995188 MsG0780038616.01.T02:intron 35.0%
GTCAAACTGACAAACAAAGT+TGG - Chr7:50001547-50001566 MsG0780038616.01.T02:intron 35.0%
GTCCAAAGTTAAGGTTACTT+TGG - Chr7:49995425-49995444 MsG0780038616.01.T02:intron 35.0%
GTGAACAAATGAGGAAACAA+AGG - Chr7:49999511-49999530 MsG0780038616.01.T02:CDS 35.0%
TAAAAGCGAAGGCTGAAAAT+TGG - Chr7:49994336-49994355 MsG0780038616.01.T02:intron 35.0%
TAATATGAGACAAGGGGATA+GGG + Chr7:49996689-49996708 None:intergenic 35.0%
TAATGAGTTTGACCTTCTAC+TGG + Chr7:49996506-49996525 None:intergenic 35.0%
TAGCATCAATGGACGAAAAT+TGG + Chr7:49998923-49998942 None:intergenic 35.0%
TATAGCACTAACACTTCTGA+TGG + Chr7:49993682-49993701 None:intergenic 35.0%
TATGCAGCTTAGCACAAAAT+GGG + Chr7:49993420-49993439 None:intergenic 35.0%
TCCACTTTCCTAAGTCTTAA+CGG + Chr7:49993110-49993129 None:intergenic 35.0%
TCCCAATATCTCGAAGAAAA+TGG + Chr7:49999191-49999210 None:intergenic 35.0%
TCTCCACAACAAAGGTAATT+GGG - Chr7:50000127-50000146 MsG0780038616.01.T02:intron 35.0%
TCTTGGCTATTTAAAAGCGA+AGG - Chr7:49994325-49994344 MsG0780038616.01.T02:intron 35.0%
TGAAATTCGTAGTCTGATTC+GGG + Chr7:49993477-49993496 None:intergenic 35.0%
TGCAACAACACAATGAGATT+GGG - Chr7:49999758-49999777 MsG0780038616.01.T02:CDS 35.0%
TGCAATGAAGGAAGTGAAAA+AGG - Chr7:50000068-50000087 MsG0780038616.01.T02:intron 35.0%
TGGGAAAAAAAGATACAGGA+CGG - Chr7:49999437-49999456 MsG0780038616.01.T02:CDS 35.0%
TTAGCAATGCAGAACATTGT+GGG + Chr7:50000024-50000043 None:intergenic 35.0%
TTCATTCTTCTGTTGAATGG+AGG + Chr7:49999384-49999403 None:intergenic 35.0%
TTCTCCACAACAAAGGTAAT+TGG - Chr7:50000126-50000145 MsG0780038616.01.T02:intron 35.0%
TTGCATGGTTAAAACTACCT+TGG + Chr7:49999743-49999762 None:intergenic 35.0%
TTGTGGAGAAAGAAACTTAG+CGG + Chr7:50000116-50000135 None:intergenic 35.0%
! AAACAGTTCGTTGTTGATTG+TGG + Chr7:49994620-49994639 None:intergenic 35.0%
! AAACCATTCCTTTTGTCATG+AGG - Chr7:49997704-49997723 MsG0780038616.01.T02:intron 35.0%
! AACCATTCCTTTTGTCATGA+GGG - Chr7:49997705-49997724 MsG0780038616.01.T02:intron 35.0%
! AATCTCATTGTGTTGTTGCA+TGG + Chr7:49999758-49999777 None:intergenic 35.0%
! AATTCTACGCATCTTTTCTC+GGG - Chr7:49997578-49997597 MsG0780038616.01.T02:intron 35.0%
! ACAAGATAATCGTTGGTTGA+TGG + Chr7:49998828-49998847 None:intergenic 35.0%
! ACAAGATGCATCTTCTTTTC+GGG - Chr7:50000436-50000455 MsG0780038616.01.T02:intron 35.0%
! AGATTGTGATAGTCTGAAGT+GGG - Chr7:49995637-49995656 MsG0780038616.01.T02:intron 35.0%
! ATGAAAGTGGCAAGTCTTTT+TGG - Chr7:50000161-50000180 MsG0780038616.01.T02:intron 35.0%
! CACCATTTTCTTCGAGATAT+TGG - Chr7:49999186-49999205 MsG0780038616.01.T02:intron 35.0%
! CCTTGCCTTATAATTGATTC+AGG - Chr7:49998800-49998819 MsG0780038616.01.T02:CDS 35.0%
! CCTTTAAATTGCATTGGCAT+AGG - Chr7:49994957-49994976 MsG0780038616.01.T02:intron 35.0%
! CTGAAACCCCATTTTATTGT+GGG - Chr7:49999135-49999154 MsG0780038616.01.T02:intron 35.0%
! GCAACAGCTTTTAAACTCAA+GGG + Chr7:49995400-49995419 None:intergenic 35.0%
! GCTTTTATAGGGTAATTGGT+GGG - Chr7:49999060-49999079 MsG0780038616.01.T02:intron 35.0%
! GTTGTTAACTTGGTAAGTCT+TGG - Chr7:49994308-49994327 MsG0780038616.01.T02:intron 35.0%
! TAAGTCTTAACGGGTCAATT+TGG + Chr7:49993100-49993119 None:intergenic 35.0%
! TCACTAGCCTATAAGAAAGT+TGG + Chr7:50001116-50001135 None:intergenic 35.0%
! TCCATAGTTTCTGAAAGCAT+AGG - Chr7:49997883-49997902 MsG0780038616.01.T02:intron 35.0%
! TGAAACCCCATTTTATTGTG+GGG - Chr7:49999136-49999155 MsG0780038616.01.T02:intron 35.0%
! TGCTTTTATAGGGTAATTGG+TGG - Chr7:49999059-49999078 MsG0780038616.01.T02:intron 35.0%
!! CCAGTCATCATTATTTTGTC+AGG - Chr7:49998103-49998122 MsG0780038616.01.T02:intron 35.0%
!! CGTTTTGTTGAGTTACTAGT+GGG - Chr7:49997649-49997668 MsG0780038616.01.T02:intron 35.0%
!! CTTCTAAAATGGAAACACCA+TGG + Chr7:49998164-49998183 None:intergenic 35.0%
!! GAAGAGTGCTATTTATTAGC+AGG - Chr7:49997839-49997858 MsG0780038616.01.T02:intron 35.0%
!! TCGTTTTGTTGAGTTACTAG+TGG - Chr7:49997648-49997667 MsG0780038616.01.T02:intron 35.0%
!! TCTGAAACCCCATTTTATTG+TGG - Chr7:49999134-49999153 MsG0780038616.01.T02:intron 35.0%
!! TGCACAAGTTTTATCAATGG+CGG - Chr7:49993381-49993400 MsG0780038616.01.T02:intron 35.0%
!!! ACGTAATTTTTGGAGTTCTC+TGG + Chr7:49998304-49998323 None:intergenic 35.0%
!!! ATCTTACTTTTGGTTTGGTC+AGG - Chr7:49997392-49997411 MsG0780038616.01.T02:CDS 35.0%
!!! GTTTTATGGGCATTGAGAAA+TGG + Chr7:50001638-50001657 None:intergenic 35.0%
!!! TAATTTTTGGAGTTCTCTGG+TGG + Chr7:49998301-49998320 None:intergenic 35.0%
!!! TTATTTTTTTTGGTGGTGGC+CGG - Chr7:49993996-49994015 MsG0780038616.01.T02:intron 35.0%
AACACATACGTCTGATTGTC+TGG - Chr7:49998757-49998776 MsG0780038616.01.T02:CDS 40.0%
AACCCCAATTACCTTTGTTG+TGG + Chr7:50000133-50000152 None:intergenic 40.0%
AAGAAACTCAACCACGTCAA+AGG + Chr7:49999665-49999684 None:intergenic 40.0%
AAGAACCAGGGTATGCATAT+GGG - Chr7:49996233-49996252 MsG0780038616.01.T02:intron 40.0%
AAGGAATTAAGAGCCCTTAC+AGG - Chr7:50001663-50001682 MsG0780038616.01.T02:five_prime_UTR 40.0%
AATGAGCCTACACTACTCAA+AGG + Chr7:49997152-49997171 None:intergenic 40.0%
AATGCCCATAAAACGGACAA+AGG - Chr7:50001644-50001663 MsG0780038616.01.T02:five_prime_UTR 40.0%
AATTAAGAGCCCTTACAGGA+TGG - Chr7:50001667-50001686 MsG0780038616.01.T02:five_prime_UTR 40.0%
ACACATACGTCTGATTGTCT+GGG - Chr7:49998758-49998777 MsG0780038616.01.T02:CDS 40.0%
ACCATGGGTAGCAAATATAC+GGG + Chr7:49998148-49998167 None:intergenic 40.0%
ACGAAAATTGGGTTTGAGTC+GGG + Chr7:49998911-49998930 None:intergenic 40.0%
ACTATGGAGCGGTTCATATA+TGG + Chr7:49997871-49997890 None:intergenic 40.0%
ACTTCCTTCATTGCAGCTAT+TGG + Chr7:50000063-50000082 None:intergenic 40.0%
AGAAGCAACAAAGATTCCAC+TGG + Chr7:49994761-49994780 None:intergenic 40.0%
AGAGAACATACCATCCTGTA+AGG + Chr7:50001680-50001699 None:intergenic 40.0%
AGTTTAAAAGCTGTTGCCGA+GGG - Chr7:49995403-49995422 MsG0780038616.01.T02:intron 40.0%
ATCAACCCCTCACAAATGAA+TGG + Chr7:49996554-49996573 None:intergenic 40.0%
ATCCCTCATGACAAAAGGAA+TGG + Chr7:49997710-49997729 None:intergenic 40.0%
ATGCAGCTTAGCACAAAATG+GGG + Chr7:49993419-49993438 None:intergenic 40.0%
ATTCAAGCCGAGTGTATTTG+GGG - Chr7:49994896-49994915 MsG0780038616.01.T02:intron 40.0%
CAACTTATCAACATTCTCCC+AGG - Chr7:49998852-49998871 MsG0780038616.01.T02:intron 40.0%
CAAGAGTGGTATGAACCAAA+TGG - Chr7:49999693-49999712 MsG0780038616.01.T02:CDS 40.0%
CACAATGTTCTGCATTGCTA+AGG - Chr7:50000023-50000042 MsG0780038616.01.T02:intron 40.0%
CACAGTTGTGTCAATGTATG+AGG - Chr7:50001470-50001489 MsG0780038616.01.T02:intron 40.0%
CACCATGGGTAGCAAATATA+CGG + Chr7:49998149-49998168 None:intergenic 40.0%
CATACTATATGCAAGGTCTG+GGG + Chr7:49994030-49994049 None:intergenic 40.0%
CATGGTTAAAACTACCTTGG+TGG + Chr7:49999740-49999759 None:intergenic 40.0%
CCACTTTCCTAAGTCTTAAC+GGG + Chr7:49993109-49993128 None:intergenic 40.0%
CCATATTCGAGACACCATTA+AGG - Chr7:49999579-49999598 MsG0780038616.01.T02:intron 40.0%
CCTTAATGGTGTCTCGAATA+TGG + Chr7:49999582-49999601 None:intergenic 40.0%
CGGGTATAAGATTTGTCAAC+AGG + Chr7:49995089-49995108 None:intergenic 40.0%
CTACCTATAGTTGACCCATT+TGG + Chr7:49999711-49999730 None:intergenic 40.0%
CTATGGAGCGGTTCATATAT+GGG + Chr7:49997870-49997889 None:intergenic 40.0%
CTCCACAACAAAGGTAATTG+GGG - Chr7:50000128-50000147 MsG0780038616.01.T02:intron 40.0%
CTTAGCAATGCAGAACATTG+TGG + Chr7:50000025-50000044 None:intergenic 40.0%
GAACCAAATGGGTCAACTAT+AGG - Chr7:49999705-49999724 MsG0780038616.01.T02:CDS 40.0%
GAATGAGATGAGGATTGGAT+TGG + Chr7:49993164-49993183 None:intergenic 40.0%
GACATATCCCTCATGACAAA+AGG + Chr7:49997715-49997734 None:intergenic 40.0%
GACGAAAATTGGGTTTGAGT+CGG + Chr7:49998912-49998931 None:intergenic 40.0%
GAGAACATACCATCCTGTAA+GGG + Chr7:50001679-50001698 None:intergenic 40.0%
GATGAGAATGAGATGAGGAT+TGG + Chr7:49993169-49993188 None:intergenic 40.0%
GATGTGATGAGAATGAGATG+AGG + Chr7:49993174-49993193 None:intergenic 40.0%
GCATACTATATGCAAGGTCT+GGG + Chr7:49994031-49994050 None:intergenic 40.0%
GCCCAAAGTAACCTTAACTT+TGG + Chr7:49995430-49995449 None:intergenic 40.0%
GCCTTTCTACTAGTACCATT+AGG - Chr7:49996154-49996173 MsG0780038616.01.T02:intron 40.0%
GCTTGTAGTAGTACTAGGAT+GGG - Chr7:50000497-50000516 MsG0780038616.01.T02:intron 40.0%
GTAATATGAGACAAGGGGAT+AGG + Chr7:49996690-49996709 None:intergenic 40.0%
GTACAGAACATTACAAGGTC+TGG - Chr7:49997337-49997356 MsG0780038616.01.T02:intron 40.0%
GTCATTCTATCTGTGCTACA+TGG - Chr7:49996053-49996072 MsG0780038616.01.T02:intron 40.0%
GTCTCTGATCAAATTGATGG+TGG - Chr7:49999986-50000005 MsG0780038616.01.T02:intron 40.0%
TAACCTTAACTTTGGACCCT+CGG + Chr7:49995422-49995441 None:intergenic 40.0%
TAAGAACCAGGGTATGCATA+TGG - Chr7:49996232-49996251 MsG0780038616.01.T02:intron 40.0%
TAGTAGGAACCGAAACACAT+CGG - Chr7:50000327-50000346 MsG0780038616.01.T02:intron 40.0%
TATCCTTGGCATCTCACTTT+GGG + Chr7:49998681-49998700 None:intergenic 40.0%
TCAACTAAACAGCTTCCATG+TGG + Chr7:49999000-49999019 None:intergenic 40.0%
TGCATACTATATGCAAGGTC+TGG + Chr7:49994032-49994051 None:intergenic 40.0%
TGCTTTCAGAAACTATGGAG+CGG + Chr7:49997882-49997901 None:intergenic 40.0%
TGGGTCTCTGATCAAATTGA+TGG - Chr7:49999983-50000002 MsG0780038616.01.T02:intron 40.0%
TGGTGGAACAGCATCTAATT+TGG - Chr7:49994998-49995017 MsG0780038616.01.T02:intron 40.0%
TGGTTCATACCACTCTTGAA+GGG + Chr7:49999691-49999710 None:intergenic 40.0%
TGTTAAGGATGTGCTTCGTT+TGG - Chr7:49999960-49999979 MsG0780038616.01.T02:intron 40.0%
TTAGAGAAAGAGGCTTATGC+GGG - Chr7:49995346-49995365 MsG0780038616.01.T02:intron 40.0%
TTATCCTTGGCATCTCACTT+TGG + Chr7:49998682-49998701 None:intergenic 40.0%
TTGGTTCATACCACTCTTGA+AGG + Chr7:49999692-49999711 None:intergenic 40.0%
TTTCTCGGGTATTTGGTCTA+CGG - Chr7:49997592-49997611 MsG0780038616.01.T02:intron 40.0%
TTTCTGAATTGTGTTGCAGG+CGG - Chr7:49993341-49993360 MsG0780038616.01.T02:CDS 40.0%
TTTCTTATGCCCTTCAAGAG+TGG - Chr7:49999679-49999698 MsG0780038616.01.T02:CDS 40.0%
! ACATGGTTTTTGAACGTTGC+TGG + Chr7:50001587-50001606 None:intergenic 40.0%
! AGGGTCTTTTTGCAGATTGA+AGG + Chr7:49995381-49995400 None:intergenic 40.0%
! ATCACAGCAGGAGCTTTATA+AGG + Chr7:49996478-49996497 None:intergenic 40.0%
! ATTGGTGGGTCATAGGAAAT+TGG - Chr7:49999074-49999093 MsG0780038616.01.T02:intron 40.0%
! CATGGTTTTTGAACGTTGCT+GGG + Chr7:50001586-50001605 None:intergenic 40.0%
! CATTCATACTGACTGTCCTT+TGG - Chr7:49997528-49997547 MsG0780038616.01.T02:intron 40.0%
! CTTTTGTCTCTTTTGCAGTG+CGG - Chr7:49995246-49995265 MsG0780038616.01.T02:intron 40.0%
! GATTGAGGATGGCCTTTTAT+GGG + Chr7:49998545-49998564 None:intergenic 40.0%
! GGCAACAGCTTTTAAACTCA+AGG + Chr7:49995401-49995420 None:intergenic 40.0%
! GGGTTTTTCTGCAATGAAAG+TGG - Chr7:50000148-50000167 MsG0780038616.01.T02:intron 40.0%
! TATCTTTATTTAGCCCCGCT+GGG - Chr7:49999928-49999947 MsG0780038616.01.T02:CDS 40.0%
! TCTTTGTTGCTTCTATTGCC+TGG - Chr7:49994767-49994786 MsG0780038616.01.T02:intron 40.0%
! TGATTGAGGATGGCCTTTTA+TGG + Chr7:49998546-49998565 None:intergenic 40.0%
! TGGTCTTTTCTACTCTGTCT+TGG - Chr7:49998377-49998396 MsG0780038616.01.T02:intron 40.0%
!! AAAAGACTCGTGTTGGTTTG+TGG - Chr7:50000573-50000592 MsG0780038616.01.T02:intron 40.0%
!! AAAGACTCGTGTTGGTTTGT+GGG - Chr7:50000574-50000593 MsG0780038616.01.T02:intron 40.0%
!! CAGACATTTCTGGTAGGTAA+GGG - Chr7:49995153-49995172 MsG0780038616.01.T02:intron 40.0%
!! CTGATCAAATTGATGGTGGA+AGG - Chr7:49999990-50000009 MsG0780038616.01.T02:intron 40.0%
!! CTTAAGGAGCATCTTGACTT+TGG - Chr7:49997012-49997031 MsG0780038616.01.T02:intron 40.0%
!! GGATTTTGAAGAAACGAAGC+AGG - Chr7:49993127-49993146 MsG0780038616.01.T02:CDS 40.0%
!! TCAGACATTTCTGGTAGGTA+AGG - Chr7:49995152-49995171 MsG0780038616.01.T02:intron 40.0%
!! TTAGTTATAGCTCTGGCAGA+TGG - Chr7:49998186-49998205 MsG0780038616.01.T02:intron 40.0%
!! TTCTGTTTCTGTACAACCAG+TGG - Chr7:49994742-49994761 MsG0780038616.01.T02:intron 40.0%
!! TTTTCTGCAAGTTGAGGAAG+AGG - Chr7:49995453-49995472 MsG0780038616.01.T02:intron 40.0%
!!! AGCTGGTTTTTCTTCAGACT+TGG - Chr7:49999798-49999817 MsG0780038616.01.T02:CDS 40.0%
!!! TATTTTTTTTGGTGGTGGCC+GGG - Chr7:49993997-49994016 MsG0780038616.01.T02:intron 40.0%
AACCTTTCGTATCCACCTAG+CGG + Chr7:50000260-50000279 None:intergenic 45.0%
AACTTCACTCTCACTCTCAC+TGG - Chr7:49993215-49993234 MsG0780038616.01.T02:CDS 45.0%
AAGGATGTGCTTCGTTTGGT+GGG - Chr7:49999964-49999983 MsG0780038616.01.T02:intron 45.0%
ACACAACTGTGTCCATGTTG+TGG + Chr7:50001461-50001480 None:intergenic 45.0%
ACGGTGATTTGAGGGGAAAA+AGG + Chr7:49993269-49993288 None:intergenic 45.0%
ACTAGACATGACACTGACAC+TGG - Chr7:49993587-49993606 MsG0780038616.01.T02:intron 45.0%
ACTGCTGTCCGGTAAATCAA+TGG + Chr7:50001529-50001548 None:intergenic 45.0%
AGTGAGAGTGAGAGTGAAGT+TGG + Chr7:49993216-49993235 None:intergenic 45.0%
ATAGGTAGTTTCACCCACCA+AGG - Chr7:49999723-49999742 MsG0780038616.01.T02:CDS 45.0%
ATCATCCCATATGCATACCC+TGG + Chr7:49996241-49996260 None:intergenic 45.0%
ATCTTTCTTGGAGGGTTGCA+CGG - Chr7:49999833-49999852 MsG0780038616.01.T02:CDS 45.0%
ATGCCTAAATAGGAGCCAAC+AGG - Chr7:49997061-49997080 MsG0780038616.01.T02:intron 45.0%
ATTCTTGCATAGAGACCTCG+AGG + Chr7:49998626-49998645 None:intergenic 45.0%
ATTTGACCGTCTCCTTTCCT+GGG + Chr7:50001293-50001312 None:intergenic 45.0%
CATGCTGAAAAGACTCGTGT+TGG - Chr7:50000566-50000585 MsG0780038616.01.T02:intron 45.0%
CATGGAGATTCCAACAGGAT+AGG + Chr7:49998598-49998617 None:intergenic 45.0%
CATGTAGTCCCATACCTACA+CGG + Chr7:50000372-50000391 None:intergenic 45.0%
CCCGTTAAGACTTAGGAAAG+TGG - Chr7:49993106-49993125 MsG0780038616.01.T02:CDS 45.0%
CCCTCACAAATGAATGGCAA+GGG + Chr7:49996548-49996567 None:intergenic 45.0%
CCCTTGCCATTCATTTGTGA+GGG - Chr7:49996545-49996564 MsG0780038616.01.T02:CDS 45.0%
CCTCTCATTCCGATGTGTTT+CGG + Chr7:50000339-50000358 None:intergenic 45.0%
CCTTGCCATTCATTTGTGAG+GGG - Chr7:49996546-49996565 MsG0780038616.01.T02:CDS 45.0%
CGAAACACATCGGAATGAGA+GGG - Chr7:50000337-50000356 MsG0780038616.01.T02:intron 45.0%
CGAATTTCAAGACTGCTCCA+AGG - Chr7:49993488-49993507 MsG0780038616.01.T02:intron 45.0%
CTCGAATATGGCTTCGTCAT+AGG + Chr7:49999570-49999589 None:intergenic 45.0%
CTGCTGTCCGGTAAATCAAT+GGG + Chr7:50001528-50001547 None:intergenic 45.0%
CTGTGATGTGATCCAGTAGA+AGG - Chr7:49996491-49996510 MsG0780038616.01.T02:CDS 45.0%
GACGTATGTGTTCGACAATG+AGG + Chr7:49998749-49998768 None:intergenic 45.0%
GAGTCCGATATGACAACATG+TGG - Chr7:49999899-49999918 MsG0780038616.01.T02:CDS 45.0%
GAGTTTAAAAGCTGTTGCCG+AGG - Chr7:49995402-49995421 MsG0780038616.01.T02:intron 45.0%
GATAGGACTCCACTAATCGA+GGG + Chr7:49998581-49998600 None:intergenic 45.0%
GCACTAACACTTCTGATGGA+AGG + Chr7:49993678-49993697 None:intergenic 45.0%
GCTTAACTGTGGAGTTCCTA+TGG + Chr7:50000470-50000489 None:intergenic 45.0%
GGCTTGTAGTAGTACTAGGA+TGG - Chr7:50000496-50000515 MsG0780038616.01.T02:intron 45.0%
GGGAAGGGTGAATGTGTAAA+AGG + Chr7:49993457-49993476 None:intergenic 45.0%
GGGACTACATGGTTGAAGAA+AGG - Chr7:50000381-50000400 MsG0780038616.01.T02:intron 45.0%
GTATGTGTTCGACAATGAGG+AGG + Chr7:49998746-49998765 None:intergenic 45.0%
TAACATCCCAGACTGCTTAC+AGG + Chr7:50000613-50000632 None:intergenic 45.0%
TAAGGATGTGCTTCGTTTGG+TGG - Chr7:49999963-49999982 MsG0780038616.01.T02:intron 45.0%
TACCTTGTTCCCTCGATTAG+TGG - Chr7:49998569-49998588 MsG0780038616.01.T02:intron 45.0%
TAGAGAAAGAGGCTTATGCG+GGG - Chr7:49995347-49995366 MsG0780038616.01.T02:intron 45.0%
TCCCTTGCCATTCATTTGTG+AGG - Chr7:49996544-49996563 MsG0780038616.01.T02:CDS 45.0%
TCGGTTCCTACTATTGTCGT+GGG + Chr7:50000320-50000339 None:intergenic 45.0%
TGCAGCTATTGGCACCTTAA+GGG + Chr7:50000052-50000071 None:intergenic 45.0%
TGCTAAATGAGAGAGCCTGT+TGG + Chr7:49997079-49997098 None:intergenic 45.0%
TGTAAAAGGCAACACTCACC+AGG - Chr7:49996096-49996115 MsG0780038616.01.T02:intron 45.0%
TGTCCGGTAAATCAATGGGT+TGG + Chr7:50001524-50001543 None:intergenic 45.0%
TTAAACCGTTCCCCTTAGGT+CGG + Chr7:50000284-50000303 None:intergenic 45.0%
TTAAAGGGAATGCCCGAAGA+CGG + Chr7:49994944-49994963 None:intergenic 45.0%
TTAGTGGAGTCCTATCCTGT+TGG - Chr7:49998585-49998604 MsG0780038616.01.T02:intron 45.0%
TTCGGTTCCTACTATTGTCG+TGG + Chr7:50000321-50000340 None:intergenic 45.0%
TTCTATCTGTGCTACATGGC+TGG - Chr7:49996057-49996076 MsG0780038616.01.T02:intron 45.0%
TTGCAGCTATTGGCACCTTA+AGG + Chr7:50000053-50000072 None:intergenic 45.0%
TTGTCAGTTTGACTGCTGTC+CGG + Chr7:50001540-50001559 None:intergenic 45.0%
TTGTGGATCGCGGAAAATAG+CGG + Chr7:49994603-49994622 None:intergenic 45.0%
! ATCTTTATTTAGCCCCGCTG+GGG - Chr7:49999929-49999948 MsG0780038616.01.T02:CDS 45.0%
! CAAGGTATGCTGATTGAGGA+TGG + Chr7:49998556-49998575 None:intergenic 45.0%
! CGCATCTTTTCTCGGGTATT+TGG - Chr7:49997585-49997604 MsG0780038616.01.T02:intron 45.0%
! CTATCTTTATTTAGCCCCGC+TGG - Chr7:49999927-49999946 MsG0780038616.01.T02:CDS 45.0%
! GCTATAGTGCTGTTGTGTAG+CGG + Chr7:49993927-49993946 None:intergenic 45.0%
! GGAACAAGGTATGCTGATTG+AGG + Chr7:49998560-49998579 None:intergenic 45.0%
! TAGGGTAATTGGTGGGTCAT+AGG - Chr7:49999067-49999086 MsG0780038616.01.T02:intron 45.0%
! TCCCGTATATTTGCTACCCA+TGG - Chr7:49998144-49998163 MsG0780038616.01.T02:intron 45.0%
! TCGTTGTTGATTGTGGATCG+CGG + Chr7:49994613-49994632 None:intergenic 45.0%
! TGAGCTTAGCTCAGTTGGTA+GGG + Chr7:49994059-49994078 None:intergenic 45.0%
! TGCAAGTTGAGGAAGAGGTA+GGG - Chr7:49995458-49995477 MsG0780038616.01.T02:intron 45.0%
! TTGCATTGGCATAGGAGCTT+TGG - Chr7:49994965-49994984 MsG0780038616.01.T02:intron 45.0%
!! AAGACTCGTGTTGGTTTGTG+GGG - Chr7:50000575-50000594 MsG0780038616.01.T02:intron 45.0%
!! AAGGAGCATCTTGACTTTGG+AGG - Chr7:49997015-49997034 MsG0780038616.01.T02:intron 45.0%
!! ACAGCTCAGACATTTCTGGT+AGG - Chr7:49995147-49995166 MsG0780038616.01.T02:intron 45.0%
!! ATTCGTAGTCTGATTCGGGA+AGG + Chr7:49993473-49993492 None:intergenic 45.0%
!! CGTTTCGAGTTCTGTTGGTA+TGG - Chr7:49995988-49996007 MsG0780038616.01.T02:intron 45.0%
!! GAGCCAACCCATTGATTTAC+CGG - Chr7:50001518-50001537 MsG0780038616.01.T02:intron 45.0%
!! GCTTGGCTTGTAGTAGTACT+AGG - Chr7:50000492-50000511 MsG0780038616.01.T02:intron 45.0%
!! GGGGATAGGGAGTATTTGTT+TGG + Chr7:49996676-49996695 None:intergenic 45.0%
!! GGTGAGTGTTGCCTTTTACA+AGG + Chr7:49996096-49996115 None:intergenic 45.0%
!! TCAAGCGTTTCGAGTTCTGT+TGG - Chr7:49995983-49996002 MsG0780038616.01.T02:intron 45.0%
!! TGGTGTTGCAAGCTTCTATC+TGG - Chr7:49998206-49998225 MsG0780038616.01.T02:intron 45.0%
!! TGTTGGTTTGTGGGGTTAGT+CGG - Chr7:50000583-50000602 MsG0780038616.01.T02:intron 45.0%
!! TTCGTAGTCTGATTCGGGAA+GGG + Chr7:49993472-49993491 None:intergenic 45.0%
!! TTTTCGGGAGCTCAATCCAT+AGG - Chr7:50000451-50000470 MsG0780038616.01.T02:intron 45.0%
!!! ATTTTTTTTGGTGGTGGCCG+GGG - Chr7:49993998-49994017 MsG0780038616.01.T02:intron 45.0%
!! TCTTAAAAAAAAAATTATTA+TGG - Chr7:49996431-49996450 MsG0780038616.01.T02:intron 5.0%
AAGCCAAGCACGCTTAACTG+TGG + Chr7:50000481-50000500 None:intergenic 50.0%
ACATCGGAATGAGAGGGATC+CGG - Chr7:50000343-50000362 MsG0780038616.01.T02:intron 50.0%
ACCTTTCGTATCCACCTAGC+GGG + Chr7:50000259-50000278 None:intergenic 50.0%
ACGAAAGGTTCCCGACCTAA+GGG - Chr7:50000270-50000289 MsG0780038616.01.T02:intron 50.0%
ACGCAGAGTCTTCCAAGATG+GGG - Chr7:50000189-50000208 MsG0780038616.01.T02:intron 50.0%
ACTCCACAGTTAAGCGTGCT+TGG - Chr7:50000475-50000494 MsG0780038616.01.T02:intron 50.0%
AGACGCAGAGTCTTCCAAGA+TGG - Chr7:50000187-50000206 MsG0780038616.01.T02:intron 50.0%
AGAGAAAGAGGCTTATGCGG+GGG - Chr7:49995348-49995367 MsG0780038616.01.T02:intron 50.0%
AGAGTGAGAGTGAAGTTGGC+GGG + Chr7:49993212-49993231 None:intergenic 50.0%
AGATTGGGACAGAGAGACTG+AGG - Chr7:49999773-49999792 MsG0780038616.01.T02:CDS 50.0%
AGCTGCATATGCAGCAGAGA+AGG - Chr7:49993431-49993450 MsG0780038616.01.T02:intron 50.0%
AGGTGCATGGAGATTCCAAC+AGG + Chr7:49998603-49998622 None:intergenic 50.0%
ATGCTTACCGGGAAACTTCC+CGG + Chr7:50000530-50000549 None:intergenic 50.0%
CAGCTTAGCACAAAATGGGG+AGG + Chr7:49993416-49993435 None:intergenic 50.0%
CATTTGACCGTCTCCTTTCC+TGG + Chr7:50001294-50001313 None:intergenic 50.0%
CCAACTGAGCTAAGCTCACT+AGG - Chr7:49994061-49994080 MsG0780038616.01.T02:intron 50.0%
CCAGTGGTTGTACCACAACA+TGG - Chr7:50001446-50001465 MsG0780038616.01.T02:intron 50.0%
CCATGTTGTGGTACAACCAC+TGG + Chr7:50001449-50001468 None:intergenic 50.0%
CCCCTCACAAATGAATGGCA+AGG + Chr7:49996549-49996568 None:intergenic 50.0%
CCGAAACACATCGGAATGAG+AGG - Chr7:50000336-50000355 MsG0780038616.01.T02:intron 50.0%
CCTAGTGAGCTTAGCTCAGT+TGG + Chr7:49994064-49994083 None:intergenic 50.0%
CGGACTTCACTGTGAAACAG+CGG + Chr7:50000096-50000115 None:intergenic 50.0%
CGGTTCCTACTATTGTCGTG+GGG + Chr7:50000319-50000338 None:intergenic 50.0%
CGTGACAGCTCAGACATTTC+TGG - Chr7:49995143-49995162 MsG0780038616.01.T02:intron 50.0%
CGTGTAGGTATGGGACTACA+TGG - Chr7:50000370-50000389 MsG0780038616.01.T02:intron 50.0%
CTACTGGATCACATCACAGC+AGG + Chr7:49996490-49996509 None:intergenic 50.0%
CTCCACTAATCGAGGGAACA+AGG + Chr7:49998574-49998593 None:intergenic 50.0%
CTGAAGCAGTTCCTTTGACG+TGG - Chr7:49999651-49999670 MsG0780038616.01.T02:CDS 50.0%
CTGTGCTACATGGCTGGAAA+AGG - Chr7:49996063-49996082 MsG0780038616.01.T02:intron 50.0%
GACGCAGAGTCTTCCAAGAT+GGG - Chr7:50000188-50000207 MsG0780038616.01.T02:intron 50.0%
GAGAGTGAGAGTGAAGTTGG+CGG + Chr7:49993213-49993232 None:intergenic 50.0%
GATATCGAAAGCCACGACGT+GGG + Chr7:50000237-50000256 None:intergenic 50.0%
GATTGGGACAGAGAGACTGA+GGG - Chr7:49999774-49999793 MsG0780038616.01.T02:CDS 50.0%
GCAGTGCCTTTGAGTAGTGT+AGG - Chr7:49997143-49997162 MsG0780038616.01.T02:intron 50.0%
GGATAGGACTCCACTAATCG+AGG + Chr7:49998582-49998601 None:intergenic 50.0%
GGCAATCCTGTAAGCAGTCT+GGG - Chr7:50000604-50000623 MsG0780038616.01.T02:intron 50.0%
GGTGCCAATAGCTGCAATGA+AGG - Chr7:50000056-50000075 MsG0780038616.01.T02:intron 50.0%
GGTTCCTACTATTGTCGTGG+GGG + Chr7:50000318-50000337 None:intergenic 50.0%
GTCCTCACTCACATGCTTAC+CGG + Chr7:50000542-50000561 None:intergenic 50.0%
GTGAGCTTAGCTCAGTTGGT+AGG + Chr7:49994060-49994079 None:intergenic 50.0%
TAAACCGTTCCCCTTAGGTC+GGG + Chr7:50000283-50000302 None:intergenic 50.0%
TACGAAAGGTTCCCGACCTA+AGG - Chr7:50000269-50000288 MsG0780038616.01.T02:intron 50.0%
TACTAGGATGGGTGACCTAC+CGG - Chr7:50000508-50000527 MsG0780038616.01.T02:intron 50.0%
TCCTCACTCACATGCTTACC+GGG + Chr7:50000541-50000560 None:intergenic 50.0%
TCTGCAGCCCCAAATACACT+CGG + Chr7:49994906-49994925 None:intergenic 50.0%
TGGCTTCGTCATAGGTGTCT+CGG + Chr7:49999562-49999581 None:intergenic 50.0%
TTAACACCGATCAACCCCAG+CGG + Chr7:49999946-49999965 None:intergenic 50.0%
TTGCCGAGGGTCCAAAGTTA+AGG - Chr7:49995416-49995435 MsG0780038616.01.T02:intron 50.0%
TTTGACCGTCTCCTTTCCTG+GGG + Chr7:50001292-50001311 None:intergenic 50.0%
! CTAGTGGGCGCAAAACTTGT+AGG - Chr7:49997664-49997683 MsG0780038616.01.T02:intron 50.0%
! CTGCAAGTTGAGGAAGAGGT+AGG - Chr7:49995457-49995476 MsG0780038616.01.T02:intron 50.0%
! GCAGTCTGGGATGTTACACT+TGG - Chr7:50000617-50000636 MsG0780038616.01.T02:intron 50.0%
! GCTTTGGTTGACTCTGATGG+TGG - Chr7:49994981-49995000 MsG0780038616.01.T02:intron 50.0%
! GGAGCTTTGGTTGACTCTGA+TGG - Chr7:49994978-49994997 MsG0780038616.01.T02:intron 50.0%
!! CATTGCTAAGGGCACCCTTA+AGG - Chr7:50000035-50000054 MsG0780038616.01.T02:intron 50.0%
!! GAGCCTGTTGGCTCCTATTT+AGG + Chr7:49997067-49997086 None:intergenic 50.0%
!! TTCAGGTGGCTTTGAACCAG+TGG - Chr7:50001430-50001449 MsG0780038616.01.T02:intron 50.0%
!!! CTATTTTGGCACCCCAGGAA+AGG - Chr7:50001278-50001297 MsG0780038616.01.T02:intron 50.0%
!!! GGCTGCTTTTCTGCAAGTTG+AGG - Chr7:49995447-49995466 MsG0780038616.01.T02:intron 50.0%
AAGTTGGCGGGGAAAGCAAG+AGG + Chr7:49993200-49993219 None:intergenic 55.0%
AATCTCCATGCACCTCCTCG+AGG - Chr7:49998608-49998627 MsG0780038616.01.T02:intron 55.0%
ACAGAGAGACTGAGGGAAGC+TGG - Chr7:49999781-49999800 MsG0780038616.01.T02:CDS 55.0%
ACTAGGATGGGTGACCTACC+GGG - Chr7:50000509-50000528 MsG0780038616.01.T02:intron 55.0%
AGAGCAGACCTCTCCCAGTA+CGG - Chr7:50000644-50000663 MsG0780038616.01.T02:intron 55.0%
CAACTGTAACACCCACGTCG+TGG - Chr7:50000223-50000242 MsG0780038616.01.T02:intron 55.0%
CCACCCAAAGTGAGATGCCA+AGG - Chr7:49998675-49998694 MsG0780038616.01.T02:intron 55.0%
CCTTGGCATCTCACTTTGGG+TGG + Chr7:49998678-49998697 None:intergenic 55.0%
CGAAAGGTTCCCGACCTAAG+GGG - Chr7:50000271-50000290 MsG0780038616.01.T02:intron 55.0%
CGGCAATCCTGTAAGCAGTC+TGG - Chr7:50000603-50000622 MsG0780038616.01.T02:intron 55.0%
CGGCTTAAACCGTTCCCCTT+AGG + Chr7:50000288-50000307 None:intergenic 55.0%
CTTGCATAGAGACCTCGAGG+AGG + Chr7:49998623-49998642 None:intergenic 55.0%
GAGTGAGAGTGAAGTTGGCG+GGG + Chr7:49993211-49993230 None:intergenic 55.0%
GCTTTCGATATCCCGCTAGG+TGG - Chr7:50000245-50000264 MsG0780038616.01.T02:intron 55.0%
GGATATCGAAAGCCACGACG+TGG + Chr7:50000238-50000257 None:intergenic 55.0%
GGCTTCGTCATAGGTGTCTC+GGG + Chr7:49999561-49999580 None:intergenic 55.0%
GGGAACGGTTTAAGCCGCAA+GGG - Chr7:50000291-50000310 MsG0780038616.01.T02:intron 55.0%
GTGGCTTTCGATATCCCGCT+AGG - Chr7:50000242-50000261 MsG0780038616.01.T02:intron 55.0%
TAACACCGATCAACCCCAGC+GGG + Chr7:49999945-49999964 None:intergenic 55.0%
TCCCGCTAGGTGGATACGAA+AGG - Chr7:50000255-50000274 MsG0780038616.01.T02:intron 55.0%
TCCCGGTAAGCATGTGAGTG+AGG - Chr7:50000537-50000556 MsG0780038616.01.T02:intron 55.0%
TCTCCCAGTACGGTGTGGTT+CGG - Chr7:50000654-50000673 MsG0780038616.01.T02:intron 55.0%
TCTTCCAAGATGGGGAGCTC+CGG - Chr7:50000197-50000216 MsG0780038616.01.T02:intron 55.0%
TGACCTACCGGGAAGTTTCC+CGG - Chr7:50000520-50000539 MsG0780038616.01.T02:intron 55.0%
TTACCGGGAAACTTCCCGGT+AGG + Chr7:50000526-50000545 None:intergenic 55.0%
TTGCAGTGCGGTGCAGCAAA+AGG - Chr7:49995258-49995277 MsG0780038616.01.T02:intron 55.0%
! AAGGTCTGGGGTTCAAACCC+CGG + Chr7:49994018-49994037 None:intergenic 55.0%
! CACGACGTGGGTGTTACAGT+TGG + Chr7:50000225-50000244 None:intergenic 55.0%
! GTGGGTGTTACAGTTGGTGC+CGG + Chr7:50000219-50000238 None:intergenic 55.0%
!! GCTGGGGTTGATCGGTGTTA+AGG - Chr7:49999945-49999964 MsG0780038616.01.T02:intron 55.0%
!!! GGGTTCTATTTTGGCACCCC+AGG - Chr7:50001273-50001292 MsG0780038616.01.T02:intron 55.0%
AACACCGATCAACCCCAGCG+GGG + Chr7:49999944-49999963 None:intergenic 60.0%
AGACCTCTCCCAGTACGGTG+TGG - Chr7:50000649-50000668 MsG0780038616.01.T02:intron 60.0%
ATCCGGAGGCCGTGTAGGTA+TGG - Chr7:50000360-50000379 MsG0780038616.01.T02:intron 60.0%
ATTGTCGTGGGGGTCCCTTG+CGG + Chr7:50000308-50000327 None:intergenic 60.0%
CTCCCAGTACGGTGTGGTTC+GGG - Chr7:50000655-50000674 MsG0780038616.01.T02:intron 60.0%
GAACCACACCGTACTGGGAG+AGG + Chr7:50000655-50000674 None:intergenic 60.0%
GGCATGTAACACCCACGTCG+TGG - Chr7:50000701-50000720 MsG0780038616.01.T02:intron 60.0%
GGGACCCCCACGACAATAGT+AGG - Chr7:50000311-50000330 MsG0780038616.01.T02:intron 60.0%
GGGGAACGGTTTAAGCCGCA+AGG - Chr7:50000290-50000309 MsG0780038616.01.T02:intron 60.0%
GGTTCCCGACCTAAGGGGAA+CGG - Chr7:50000276-50000295 MsG0780038616.01.T02:intron 60.0%
TCCCAGTACGGTGTGGTTCG+GGG - Chr7:50000656-50000675 MsG0780038616.01.T02:intron 60.0%
TCCCATACCTACACGGCCTC+CGG + Chr7:50000365-50000384 None:intergenic 60.0%
TCCCCGAACCACACCGTACT+GGG + Chr7:50000660-50000679 None:intergenic 60.0%
TCCGGAGGCCGTGTAGGTAT+GGG - Chr7:50000361-50000380 MsG0780038616.01.T02:intron 60.0%
TCGGAATGAGAGGGATCCGG+AGG - Chr7:50000346-50000365 MsG0780038616.01.T02:intron 60.0%
TGGCACCCCAGGAAAGGAGA+CGG - Chr7:50001284-50001303 MsG0780038616.01.T02:intron 60.0%
! AGAGACCTCGAGGAGGTGCA+TGG + Chr7:49998616-49998635 None:intergenic 60.0%
! TTAGCCCCGCTGGGGTTGAT+CGG - Chr7:49999937-49999956 MsG0780038616.01.T02:intron 60.0%
ACGAACCAGGCGGAAGCTGG+TGG - Chr7:50000679-50000698 MsG0780038616.01.T02:intron 65.0%
CGAACCAGGCGGAAGCTGGT+GGG - Chr7:50000680-50000699 MsG0780038616.01.T02:intron 65.0%
GTCCCCGAACCACACCGTAC+TGG + Chr7:50000661-50000680 None:intergenic 65.0%
! GTGTGGTTCGGGGACGAACC+AGG - Chr7:50000666-50000685 MsG0780038616.01.T02:intron 65.0%
! TGGTTCGGGGACGAACCAGG+CGG - Chr7:50000669-50000688 MsG0780038616.01.T02:intron 65.0%
CATGCCCACCAGCTTCCGCC+TGG + Chr7:50000687-50000706 None:intergenic 70.0%
GAGGGATCCGGAGGCCGTGT+AGG - Chr7:50000355-50000374 MsG0780038616.01.T02:intron 70.0%
GGGACGAACCAGGCGGAAGC+TGG - Chr7:50000676-50000695 MsG0780038616.01.T02:intron 70.0%
! GGTGCCGGAGCTCCCCATCT+TGG + Chr7:50000204-50000223 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr7 gene 49993083 50001716 49993083 ID=MsG0780038616.01;Name=MsG0780038616.01
Chr7 mRNA 49993083 50001716 49993083 ID=MsG0780038616.01.T01;Parent=MsG0780038616.01;Name=MsG0780038616.01.T01;_AED=0.49;_eAED=0.49;_QI=204|1|0.87|1|0.85|0.75|8|0|468
Chr7 exon 50001290 50001452 50001290 ID=MsG0780038616.01.T01:exon:14679;Parent=MsG0780038616.01.T01
Chr7 five_prime_UTR 50001563 50001716 50001563 ID=MsG0780038616.01.T01:five_prime_utr;Parent=MsG0780038616.01.T01
Chr7 five_prime_UTR 50001403 50001452 50001403 ID=MsG0780038616.01.T01:five_prime_utr;Parent=MsG0780038616.01.T01
Chr7 CDS 50001290 50001402 50001290 ID=MsG0780038616.01.T01:cds;Parent=MsG0780038616.01.T01
Chr7 CDS 49999631 49999954 49999631 ID=MsG0780038616.01.T01:cds;Parent=MsG0780038616.01.T01
Chr7 CDS 49999325 49999535 49999325 ID=MsG0780038616.01.T01:cds;Parent=MsG0780038616.01.T01
Chr7 CDS 49998682 49998828 49998682 ID=MsG0780038616.01.T01:cds;Parent=MsG0780038616.01.T01
Chr7 CDS 49997386 49997510 49997386 ID=MsG0780038616.01.T01:cds;Parent=MsG0780038616.01.T01
Chr7 CDS 49996470 49996674 49996470 ID=MsG0780038616.01.T01:cds;Parent=MsG0780038616.01.T01
Chr7 CDS 49993083 49993364 49993083 ID=MsG0780038616.01.T01:cds;Parent=MsG0780038616.01.T01
Chr7 mRNA 49993083 50001716 49993083 ID=MsG0780038616.01.T02;Parent=MsG0780038616.01;Name=MsG0780038616.01.T02;_AED=0.49;_eAED=0.49;_QI=191|1|0.87|1|0.85|0.75|8|0|468
Chr7 exon 50001290 50001439 50001290 ID=MsG0780038616.01.T02:exon:14686;Parent=MsG0780038616.01.T02
Chr7 five_prime_UTR 50001563 50001716 50001563 ID=MsG0780038616.01.T02:five_prime_utr;Parent=MsG0780038616.01.T02
Chr7 five_prime_UTR 50001403 50001439 50001403 ID=MsG0780038616.01.T02:five_prime_utr;Parent=MsG0780038616.01.T02
Chr7 CDS 50001290 50001402 50001290 ID=MsG0780038616.01.T02:cds;Parent=MsG0780038616.01.T02
Chr7 CDS 49999631 49999954 49999631 ID=MsG0780038616.01.T02:cds;Parent=MsG0780038616.01.T02
Chr7 CDS 49999325 49999535 49999325 ID=MsG0780038616.01.T02:cds;Parent=MsG0780038616.01.T02
Chr7 CDS 49998682 49998828 49998682 ID=MsG0780038616.01.T02:cds;Parent=MsG0780038616.01.T02
Chr7 CDS 49997386 49997510 49997386 ID=MsG0780038616.01.T02:cds;Parent=MsG0780038616.01.T02
Chr7 CDS 49996470 49996674 49996470 ID=MsG0780038616.01.T02:cds;Parent=MsG0780038616.01.T02
Chr7 CDS 49993083 49993364 49993083 ID=MsG0780038616.01.T02:cds;Parent=MsG0780038616.01.T02
Gene Sequence

>MsG0780038616.01.T02

ATGGCGGAATGTGTAACCTCCCCATTTTGTGCTAAGCTGCATATGCAGCAGAGAAGGCCTTTTACACATTCACCCTTCCCGAATCAGACTACGAATTTCAAGACTGCTCCAAGAAAGTATTTCAGAAATGAATGTGAATTTTTTCACTTCCTTACACAGAAAAAATTCAAGCCGAGTGTATTTGGGGCTGCAGATTTAAAAATTACTCACCGTCTTCGGGCATTCCCTTTAAATTGCATTGGCATAGGAGCTTTGGTTGACTCTGATGGTGGAACAGCATCTAATTTGGTGCCAGTTGTTAATCAGTTTCTTTTGATGGGAAGTATATTGCTCACTTATATGGCTGGAGTAATTCCTGTTGACAAATCTTATACCCGTGATCAAAAGAACAATTCTGTAAAAAATGCATTACGTGACAGCTCAGACATTTCTGGTAGTGCGGTGCAGCAAAAGGATCAAGTTGAGTCAAATTATGTATTAGATGTGGTGAGAGAAAAACTTTTGAATTCTCTAAATGCATTAGAGAAAGAGGCTTATGCGGGGGACATCATCCTTCAATCTGCAAAAAGACCCTTGAGTTTAAAAGCTGTTGCCGAGGGTCCAAAGTTAAGGTTACTTTGGGCTGCTTTTCTGCAAGTTGAGGAAGAGGTTAATAATATGTCAAGCGTTTCGAGTTCTGTTGGTATGGATGATCCAGTCAAAGTTTTTTCTGAAGTTATTCAAAGATCATGTCATTCTATCTGTGCTACATGGCTGGAAAAGGAGTTTTTCCTTGTAAAAGGCAACACTCACCAGGAATTTGTTTCTATGATGCTTGAAAAAGTGAAAGGGGATAATGTTATTGTACAGAACATTACAAGGTCTGGCAAGAAAGATCTGTATTCAGAATTACTTTGGTATCTTACTTTTGGTTTGGTCAGGGATGATTGCTGTTATGATTCCCGTATATTTGCTACCCATGGTGTTTCCATTTTAGAAGATTTAGTTATAGCTCTGGCAGATGGTGTTGCAAGCTTCTATCTGGAGTTTATTTCTGTTGATAGTGATGTGTCAAGTAAAACAAATAGCTTGGAGGTGTCATTCTGTGCTTTGTCCACCAGAGAACTCCAAAAATTACGTAATGAGGTGGCTTTGAACCAGTGGTTGTACCACAACATGGACACAGTTGTGTCAATGTATGAGGATCGCTTTGACTTGTGTACACTTGAGAGCCAACCCATTGATTTACCGGACAGCAGTCAAACTGACAAACAAAGTTGGTGGAAGAATCTTACCCAGCAACGTTCAAAAACCATGTCACATGAGTTATATTGTATTGCGATAAACCATTTCTCAATGCCCATAAAACGGACAAAGGAATTAAGAGCCCTTACAGGATGGTATGTTCTCTTTGCCCTATCTATTTAG

>MsG0780038616.01.T01

ATGGCGGAATGTGTAACCTCCCCATTTTGTGCTAAGCTGCATATGCAGCAGAGAAGGCCTTTTACACATTCACCCTTCCCGAATCAGACTACGAATTTCAAGACTGCTCCAAGAAAGTATTTCAGAAATGAATGTGAATTTTTTCACTTCCTTACACAGAAAAAATTCAAGCCGAGTGTATTTGGGGCTGCAGATTTAAAAATTACTCACCGTCTTCGGGCATTCCCTTTAAATTGCATTGGCATAGGAGCTTTGGTTGACTCTGATGGTGGAACAGCATCTAATTTGGTGCCAGTTGTTAATCAGTTTCTTTTGATGGGAAGTATATTGCTCACTTATATGGCTGGAGTAATTCCTGTTGACAAATCTTATACCCGTGATCAAAAGAACAATTCTGTAAAAAATGCATTACGTGACAGCTCAGACATTTCTGGTAGTGCGGTGCAGCAAAAGGATCAAGTTGAGTCAAATTATGTATTAGATGTGGTGAGAGAAAAACTTTTGAATTCTCTAAATGCATTAGAGAAAGAGGCTTATGCGGGGGACATCATCCTTCAATCTGCAAAAAGACCCTTGAGTTTAAAAGCTGTTGCCGAGGGTCCAAAGTTAAGGTTACTTTGGGCTGCTTTTCTGCAAGTTGAGGAAGAGGTTAATAATATGTCAAGCGTTTCGAGTTCTGTTGGTATGGATGATCCAGTCAAAGTTTTTTCTGAAGTTATTCAAAGATCATGTCATTCTATCTGTGCTACATGGCTGGAAAAGGAGTTTTTCCTTGTAAAAGGCAACACTCACCAGGAATTTGTTTCTATGATGCTTGAAAAAGTGAAAGGGGATAATGTTATTGTACAGAACATTACAAGGTCTGGCAAGAAAGATCTGTATTCAGAATTACTTTGGTATCTTACTTTTGGTTTGGTCAGGGATGATTGCTGTTATGATTCCCGTATATTTGCTACCCATGGTGTTTCCATTTTAGAAGATTTAGTTATAGCTCTGGCAGATGGTGTTGCAAGCTTCTATCTGGAGTTTATTTCTGTTGATAGTGATGTGTCAAGTAAAACAAATAGCTTGGAGGTGTCATTCTGTGCTTTGTCCACCAGAGAACTCCAAAAATTACGTAATGAGGTGGCTTTGAACCAGTGGTTGTACCACAACATGGACACAGTTGTGTCAATGTATGAGGATCGCTTTGACTTGTGTACACTTGAGAGCCAACCCATTGATTTACCGGACAGCAGTCAAACTGACAAACAAAGTTGGTGGAAGAATCTTACCCAGCAACGTTCAAAAACCATGTCACATGAGTTATATTGTATTGCGATAAACCATTTCTCAATGCCCATAAAACGGACAAAGGAATTAAGAGCCCTTACAGGATGGTATGTTCTCTTTGCCCTATCTATTTAG

Protein sequence

>MsG0780038616.01.T02

MAECVTSPFCAKLHMQQRRPFTHSPFPNQTTNFKTAPRKYFRNECEFFHFLTQKKFKPSVFGAADLKITHRLRAFPLNCIGIGALVDSDGGTASNLVPVVNQFLLMGSILLTYMAGVIPVDKSYTRDQKNNSVKNALRDSSDISGSAVQQKDQVESNYVLDVVREKLLNSLNALEKEAYAGDIILQSAKRPLSLKAVAEGPKLRLLWAAFLQVEEEVNNMSSVSSSVGMDDPVKVFSEVIQRSCHSICATWLEKEFFLVKGNTHQEFVSMMLEKVKGDNVIVQNITRSGKKDLYSELLWYLTFGLVRDDCCYDSRIFATHGVSILEDLVIALADGVASFYLEFISVDSDVSSKTNSLEVSFCALSTRELQKLRNEVALNQWLYHNMDTVVSMYEDRFDLCTLESQPIDLPDSSQTDKQSWWKNLTQQRSKTMSHELYCIAINHFSMPIKRTKELRALTGWYVLFALSI*

>MsG0780038616.01.T01

MAECVTSPFCAKLHMQQRRPFTHSPFPNQTTNFKTAPRKYFRNECEFFHFLTQKKFKPSVFGAADLKITHRLRAFPLNCIGIGALVDSDGGTASNLVPVVNQFLLMGSILLTYMAGVIPVDKSYTRDQKNNSVKNALRDSSDISGSAVQQKDQVESNYVLDVVREKLLNSLNALEKEAYAGDIILQSAKRPLSLKAVAEGPKLRLLWAAFLQVEEEVNNMSSVSSSVGMDDPVKVFSEVIQRSCHSICATWLEKEFFLVKGNTHQEFVSMMLEKVKGDNVIVQNITRSGKKDLYSELLWYLTFGLVRDDCCYDSRIFATHGVSILEDLVIALADGVASFYLEFISVDSDVSSKTNSLEVSFCALSTRELQKLRNEVALNQWLYHNMDTVVSMYEDRFDLCTLESQPIDLPDSSQTDKQSWWKNLTQQRSKTMSHELYCIAINHFSMPIKRTKELRALTGWYVLFALSI*