Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036004.01.T02 | AES77274.1 | 75.51 | 49 | 12 | 0 | 8 | 56 | 98 | 146 | 1.72E-17 | 84 |
| MsG0780036004.01.T04 | MCI82536.1 | 91.892 | 37 | 3 | 0 | 4 | 40 | 11 | 47 | 3.57E-17 | 76.3 |
| MsG0780036004.01.T01 | XP_003621060.1 | 80.645 | 62 | 12 | 0 | 1 | 62 | 90 | 151 | 2.88E-27 | 109 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036004.01.T01 | Q9SXZ2 | 69.231 | 52 | 16 | 0 | 1 | 52 | 89 | 140 | 9.30E-20 | 82.8 |
| MsG0780036004.01.T02 | Q93WI9 | 64.103 | 39 | 14 | 0 | 8 | 46 | 104 | 142 | 1.81E-11 | 60.8 |
| MsG0780036004.01.T04 | Q93WI9 | 82.857 | 35 | 6 | 0 | 4 | 38 | 143 | 177 | 4.34E-15 | 67 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036004.01.T01 | F8T7T3 | 80.645 | 62 | 12 | 0 | 1 | 62 | 90 | 151 | 1.37e-27 | 109 |
| MsG0780036004.01.T02 | G7KXR8 | 75.510 | 49 | 12 | 0 | 8 | 56 | 98 | 146 | 8.22e-18 | 84.0 |
| MsG0780036004.01.T04 | A0A392V2Q6 | 91.892 | 37 | 3 | 0 | 4 | 40 | 11 | 47 | 1.71e-17 | 76.3 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048059.01 | MsG0780036004.01 | 0.801435 | 9.016850e-49 | 4.305777e-46 |
| MsG0080048560.01 | MsG0780036004.01 | 0.800411 | 1.459639e-48 | 6.792012e-46 |
| MsG0080048813.01 | MsG0780036004.01 | 0.807512 | 4.874548e-50 | 2.720368e-47 |
| MsG0080048992.01 | MsG0780036004.01 | 0.808068 | 3.713923e-50 | 2.102929e-47 |
| MsG0080049016.01 | MsG0780036004.01 | 0.802214 | 6.238079e-49 | 3.038294e-46 |
| MsG0080049018.01 | MsG0780036004.01 | 0.830488 | 2.854958e-55 | 3.012112e-52 |
| MsG0180000417.01 | MsG0780036004.01 | 0.854502 | 1.179879e-61 | 2.640601e-58 |
| MsG0180000719.01 | MsG0780036004.01 | 0.828578 | 8.317993e-55 | 8.301502e-52 |
| MsG0180001054.01 | MsG0780036004.01 | 0.809281 | 2.044748e-50 | 1.195541e-47 |
| MsG0180001925.01 | MsG0780036004.01 | 0.812824 | 3.490000e-51 | 2.241514e-48 |
| MsG0180002099.01 | MsG0780036004.01 | 0.822146 | 2.768144e-53 | 2.297698e-50 |
| MsG0180002463.01 | MsG0780036004.01 | 0.846703 | 1.838346e-59 | 3.191773e-56 |
| MsG0180003350.01 | MsG0780036004.01 | 0.802663 | 5.042252e-49 | 2.484053e-46 |
| MsG0180004193.01 | MsG0780036004.01 | 0.800092 | 1.695188e-48 | 7.824151e-46 |
| MsG0180004502.01 | MsG0780036004.01 | 0.808434 | 3.103195e-50 | 1.774203e-47 |
| MsG0180004586.01 | MsG0780036004.01 | 0.833194 | 6.133774e-56 | 7.012622e-53 |
| MsG0180004773.01 | MsG0780036004.01 | 0.828543 | 8.479385e-55 | 8.454209e-52 |
| MsG0180005791.01 | MsG0780036004.01 | 0.853303 | 2.612277e-61 | 5.618400e-58 |
| MsG0180006227.01 | MsG0780036004.01 | 0.818370 | 2.030632e-52 | 1.517294e-49 |
| MsG0280010994.01 | MsG0780036004.01 | 0.802804 | 4.714305e-49 | 2.331065e-46 |
| MsG0380013114.01 | MsG0780036004.01 | 0.816119 | 6.518034e-52 | 4.578517e-49 |
| MsG0380013473.01 | MsG0780036004.01 | 0.803070 | 4.154741e-49 | 2.068082e-46 |
| MsG0380014129.01 | MsG0780036004.01 | 0.832651 | 8.371144e-56 | 9.416448e-53 |
| MsG0380014607.01 | MsG0780036004.01 | -0.819453 | 1.152281e-52 | 8.871032e-50 |
| MsG0680031813.01 | MsG0780036004.01 | 0.800322 | 1.522063e-48 | 7.066397e-46 |
| MsG0680032197.01 | MsG0780036004.01 | 0.827692 | 1.359657e-54 | 1.322258e-51 |
| MsG0680035368.01 | MsG0780036004.01 | 0.800012 | 1.759267e-48 | 8.103474e-46 |
| MsG0480018628.01 | MsG0780036004.01 | 0.813064 | 3.092098e-51 | 1.998779e-48 |
| MsG0480020550.01 | MsG0780036004.01 | 0.824858 | 6.425906e-54 | 5.761531e-51 |
| MsG0480021327.01 | MsG0780036004.01 | 0.828156 | 1.051411e-54 | 1.036557e-51 |
| MsG0480021331.01 | MsG0780036004.01 | 0.839299 | 1.721956e-57 | 2.367795e-54 |
| MsG0480021563.01 | MsG0780036004.01 | 0.810421 | 1.162367e-50 | 7.003109e-48 |
| MsG0480022581.01 | MsG0780036004.01 | 0.804194 | 2.428768e-49 | 1.244411e-46 |
| MsG0480022591.01 | MsG0780036004.01 | 0.852490 | 4.461783e-61 | 9.338417e-58 |
| MsG0480022935.01 | MsG0780036004.01 | 0.815816 | 7.614242e-52 | 5.304306e-49 |
| MsG0480023006.01 | MsG0780036004.01 | 0.821453 | 4.004430e-53 | 3.259164e-50 |
| MsG0480023056.01 | MsG0780036004.01 | 0.812987 | 3.214988e-51 | 2.073913e-48 |
| MsG0480023577.01 | MsG0780036004.01 | 0.829824 | 4.145656e-55 | 4.291885e-52 |
| MsG0580024372.01 | MsG0780036004.01 | 0.815196 | 1.046178e-51 | 7.164880e-49 |
| MsG0580025315.01 | MsG0780036004.01 | 0.809405 | 1.923546e-50 | 1.128401e-47 |
| MsG0380014988.01 | MsG0780036004.01 | 0.814809 | 1.275389e-51 | 8.643960e-49 |
| MsG0380015067.01 | MsG0780036004.01 | 0.818649 | 1.755421e-52 | 1.321607e-49 |
| MsG0380015095.01 | MsG0780036004.01 | 0.835944 | 1.249020e-56 | 1.550657e-53 |
| MsG0380015200.01 | MsG0780036004.01 | 0.821609 | 3.687063e-53 | 3.013899e-50 |
| MsG0380015201.01 | MsG0780036004.01 | 0.822239 | 2.634826e-53 | 2.192828e-50 |
| MsG0380015348.01 | MsG0780036004.01 | 0.853077 | 3.032088e-61 | 6.472112e-58 |
| MsG0380016492.01 | MsG0780036004.01 | 0.802164 | 6.386991e-49 | 3.106936e-46 |
| MsG0380016881.01 | MsG0780036004.01 | 0.839908 | 1.195475e-57 | 1.675166e-54 |
| MsG0380017405.01 | MsG0780036004.01 | 0.824631 | 7.270865e-54 | 6.476956e-51 |
| MsG0380017406.01 | MsG0780036004.01 | 0.811662 | 6.258570e-51 | 3.896825e-48 |
| MsG0380017812.01 | MsG0780036004.01 | 0.825401 | 4.784098e-54 | 4.355968e-51 |
| MsG0480018088.01 | MsG0780036004.01 | 0.826192 | 3.104576e-54 | 2.891276e-51 |
| MsG0580029820.01 | MsG0780036004.01 | 0.810417 | 1.164785e-50 | 7.017079e-48 |
| MsG0680030399.01 | MsG0780036004.01 | 0.804836 | 1.783992e-49 | 9.293939e-47 |
| MsG0680030439.01 | MsG0780036004.01 | 0.805192 | 1.503391e-49 | 7.903456e-47 |
| MsG0680030441.01 | MsG0780036004.01 | 0.832031 | 1.192240e-55 | 1.316700e-52 |
| MsG0680030644.01 | MsG0780036004.01 | 0.835303 | 1.815080e-56 | 2.210908e-53 |
| MsG0280007600.01 | MsG0780036004.01 | 0.817703 | 2.874377e-52 | 2.108533e-49 |
| MsG0280007649.01 | MsG0780036004.01 | 0.801091 | 1.060472e-48 | 5.020629e-46 |
| MsG0280007650.01 | MsG0780036004.01 | 0.815004 | 1.154253e-51 | 7.864380e-49 |
| MsG0280010227.01 | MsG0780036004.01 | 0.830514 | 2.814051e-55 | 2.971246e-52 |
| MsG0780035995.01 | MsG0780036004.01 | 0.898920 | 3.305973e-77 | 3.992559e-73 |
| MsG0780036002.01 | MsG0780036004.01 | 0.923950 | 1.348882e-89 | 5.555260e-85 |
| MsG0780036004.01 | MsG0780037342.01 | 0.814877 | 1.231624e-51 | 8.362149e-49 |
| MsG0780036004.01 | MsG0780037458.01 | 0.822811 | 1.940147e-53 | 1.641229e-50 |
| MsG0780036004.01 | MsG0780038030.01 | 0.820250 | 7.573950e-53 | 5.961744e-50 |
| MsG0780036004.01 | MsG0780038047.01 | 0.823445 | 1.379903e-53 | 1.188335e-50 |
| MsG0780036004.01 | MsG0780038108.01 | 0.833320 | 5.705871e-56 | 6.548286e-53 |
| MsG0780036004.01 | MsG0780038197.01 | 0.817685 | 2.901127e-52 | 2.127104e-49 |
| MsG0780036004.01 | MsG0780038263.01 | 0.803755 | 2.996187e-49 | 1.517982e-46 |
| MsG0780036004.01 | MsG0780039836.01 | 0.821151 | 4.701589e-53 | 3.794670e-50 |
| MsG0780036004.01 | MsG0780039838.01 | 0.841022 | 6.111431e-58 | 8.863646e-55 |
| MsG0780036004.01 | MsG0780039839.01 | 0.824210 | 9.130473e-54 | 8.035022e-51 |
| MsG0780036004.01 | MsG0780040129.01 | 0.839656 | 1.390898e-57 | 1.933563e-54 |
| MsG0780036004.01 | MsG0780040321.01 | 0.813712 | 2.227777e-51 | 1.465753e-48 |
| MsG0780036004.01 | MsG0780040622.01 | 0.820695 | 5.988224e-53 | 4.771820e-50 |
| MsG0780036004.01 | MsG0780041121.01 | 0.814078 | 1.850234e-51 | 1.229422e-48 |
| MsG0780036004.01 | MsG0780041617.01 | 0.804843 | 1.778122e-49 | 9.264906e-47 |
| MsG0780036004.01 | MsG0780041618.01 | 0.823483 | 1.351762e-53 | 1.165403e-50 |
| MsG0780036004.01 | MsG0880042291.01 | 0.817547 | 3.116345e-52 | 2.276302e-49 |
| MsG0780036004.01 | MsG0880042858.01 | 0.815272 | 1.006475e-51 | 6.907641e-49 |
| MsG0780036004.01 | MsG0880042895.01 | 0.819075 | 1.405243e-52 | 1.070513e-49 |
| MsG0780036004.01 | MsG0880043069.01 | 0.804550 | 2.046877e-49 | 1.058406e-46 |
| MsG0780036004.01 | MsG0880044968.01 | 0.807744 | 4.351672e-50 | 2.443288e-47 |
| MsG0780036004.01 | MsG0880045273.01 | 0.807493 | 4.919552e-50 | 2.744146e-47 |
| MsG0780036004.01 | MsG0880045321.01 | 0.809008 | 2.339253e-50 | 1.357719e-47 |
| MsG0780036004.01 | MsG0880045369.01 | 0.819928 | 8.975056e-53 | 7.001996e-50 |
| MsG0780036004.01 | MsG0880045385.01 | 0.816734 | 4.746611e-52 | 3.390699e-49 |
| MsG0780036004.01 | MsG0880045630.01 | 0.800210 | 1.603609e-48 | 7.423750e-46 |
| MsG0780036004.01 | MsG0880045755.01 | 0.829293 | 5.580814e-55 | 5.688842e-52 |
| MsG0780036004.01 | MsG0880046189.01 | 0.831677 | 1.457900e-55 | 1.593413e-52 |
| MsG0780036004.01 | MsG0880046219.01 | 0.809233 | 2.094288e-50 | 1.222944e-47 |
| MsG0780036004.01 | MsG0880046469.01 | 0.808250 | 3.397402e-50 | 1.933060e-47 |
| MsG0780036004.01 | MsG0880046630.01 | 0.823395 | 1.417679e-53 | 1.219032e-50 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036004.01.T02 | MTR_7g006630 | 75.510 | 49 | 12 | 0 | 8 | 56 | 98 | 146 | 2.08e-21 | 84.0 |
| MsG0780036004.01.T02 | MTR_7g006690 | 75.510 | 49 | 12 | 0 | 8 | 56 | 103 | 151 | 2.39e-21 | 84.0 |
| MsG0780036004.01.T02 | MTR_7g084970 | 65.116 | 43 | 15 | 0 | 4 | 46 | 98 | 140 | 1.20e-15 | 69.3 |
| MsG0780036004.01.T02 | MTR_6g033040 | 61.538 | 39 | 15 | 0 | 8 | 46 | 102 | 140 | 3.07e-12 | 60.1 |
| MsG0780036004.01.T02 | MTR_7g085020 | 61.538 | 39 | 15 | 0 | 8 | 46 | 103 | 141 | 1.15e-11 | 58.9 |
| MsG0780036004.01.T04 | MTR_7g006690 | 91.892 | 37 | 3 | 0 | 4 | 40 | 142 | 178 | 4.42e-19 | 74.7 |
| MsG0780036004.01.T04 | MTR_7g006630 | 86.486 | 37 | 5 | 0 | 4 | 40 | 137 | 173 | 2.74e-18 | 72.8 |
| MsG0780036004.01.T04 | MTR_6g033040 | 82.857 | 35 | 6 | 0 | 4 | 38 | 141 | 175 | 1.09e-15 | 65.9 |
| MsG0780036004.01.T04 | MTR_7g084970 | 81.818 | 33 | 6 | 0 | 4 | 36 | 141 | 173 | 2.22e-14 | 62.8 |
| MsG0780036004.01.T04 | MTR_7g085020 | 78.788 | 33 | 7 | 0 | 4 | 36 | 142 | 174 | 1.80e-13 | 60.1 |
| MsG0780036004.01.T01 | MTR_7g006690 | 80.645 | 62 | 12 | 0 | 1 | 62 | 90 | 151 | 3.48e-31 | 109 |
| MsG0780036004.01.T01 | MTR_7g006630 | 80.645 | 62 | 12 | 0 | 1 | 62 | 85 | 146 | 4.04e-31 | 108 |
| MsG0780036004.01.T01 | MTR_7g084970 | 67.308 | 52 | 17 | 0 | 1 | 52 | 89 | 140 | 6.22e-21 | 83.2 |
| MsG0780036004.01.T01 | MTR_6g033040 | 65.385 | 52 | 18 | 0 | 1 | 52 | 89 | 140 | 2.79e-20 | 81.3 |
| MsG0780036004.01.T01 | MTR_7g085020 | 50.769 | 65 | 31 | 1 | 1 | 64 | 90 | 154 | 2.68e-18 | 76.3 |
| MsG0780036004.01.T01 | MTR_7g085040 | 53.846 | 52 | 24 | 0 | 1 | 52 | 86 | 137 | 8.46e-16 | 69.7 |
| MsG0780036004.01.T01 | MTR_1g060190 | 53.704 | 54 | 23 | 1 | 1 | 52 | 89 | 142 | 1.82e-13 | 63.5 |
| MsG0780036004.01.T01 | MTR_0020s0120 | 50.000 | 52 | 26 | 0 | 1 | 52 | 88 | 139 | 8.28e-13 | 62.0 |
| MsG0780036004.01.T01 | MTR_7g104460 | 55.319 | 47 | 21 | 0 | 1 | 47 | 89 | 135 | 2.41e-12 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036004.01.T02 | AT1G65480 | 64.103 | 39 | 14 | 0 | 8 | 46 | 102 | 140 | 3.84e-12 | 60.1 |
| MsG0780036004.01.T02 | AT4G20370 | 64.103 | 39 | 14 | 0 | 8 | 46 | 102 | 140 | 5.49e-12 | 59.7 |
| MsG0780036004.01.T02 | AT1G65480 | 64.103 | 39 | 14 | 0 | 8 | 46 | 146 | 184 | 5.83e-12 | 60.1 |
| MsG0780036004.01.T04 | AT4G20370 | 85.294 | 34 | 5 | 0 | 4 | 37 | 141 | 174 | 7.73e-16 | 66.2 |
| MsG0780036004.01.T04 | AT1G65480 | 77.143 | 35 | 8 | 0 | 4 | 38 | 141 | 175 | 9.89e-16 | 66.2 |
| MsG0780036004.01.T04 | AT1G65480 | 77.143 | 35 | 8 | 0 | 4 | 38 | 185 | 219 | 1.18e-15 | 66.6 |
| MsG0780036004.01.T01 | AT1G65480 | 69.231 | 52 | 16 | 0 | 1 | 52 | 89 | 140 | 9.48e-21 | 82.8 |
| MsG0780036004.01.T01 | AT1G65480 | 69.231 | 52 | 16 | 0 | 1 | 52 | 133 | 184 | 2.11e-20 | 82.8 |
| MsG0780036004.01.T01 | AT4G20370 | 65.385 | 52 | 18 | 0 | 1 | 52 | 89 | 140 | 2.22e-19 | 79.0 |
| MsG0780036004.01.T01 | AT5G03840 | 63.043 | 46 | 17 | 0 | 1 | 46 | 92 | 137 | 3.09e-13 | 63.2 |
| MsG0780036004.01.T01 | AT5G62040 | 50.943 | 53 | 25 | 1 | 1 | 52 | 89 | 141 | 2.79e-12 | 60.5 |
| MsG0780036004.01.T01 | AT2G27550 | 41.270 | 63 | 35 | 2 | 1 | 61 | 90 | 152 | 5.47e-11 | 57.0 |
Find 70 sgRNAs with CRISPR-Local
Find 170 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAATTGTCAACGAGAAAA+TGG | 0.223614 | 7:-1181610 | MsG0780036004.01.T01:CDS |
| CTTGTGGTTTGTGGTGTAAT+TGG | 0.261555 | 7:-1184111 | MsG0780036004.01.T01:five_prime_UTR |
| TTTGCAGAAGTTTACAATCT+TGG | 0.279344 | 7:-1181655 | MsG0780036004.01.T01:CDS |
| GTGTAATATTTGTGTTGTTT+AGG | 0.306242 | 7:-1181737 | MsG0780036004.01.T01:CDS |
| AATTTGTATCTTATTTGATT+TGG | 0.312640 | 7:-1181127 | MsG0780036004.01.T01:three_prime_UTR |
| TGGTGTAATTGGAGATGTTT+TGG | 0.321102 | 7:-1184100 | MsG0780036004.01.T01:five_prime_UTR |
| GTTACTAGGGCTTGGGCATC+AGG | 0.324568 | 7:+1183407 | None:intergenic |
| ATGGTGTTTGAATTAATTGT+AGG | 0.365701 | 7:-1181810 | MsG0780036004.01.T01:intron |
| ATTTCACCAACTTGAACTCT+TGG | 0.373050 | 7:+1183981 | None:intergenic |
| TGCTTTGATAATTTGCTCAT+TGG | 0.373361 | 7:+1184171 | None:intergenic |
| CCCCGTAGTAGCTGGAATAT+TGG | 0.377807 | 7:+1182460 | None:intergenic |
| TTGAAGGACAAGGATATGTT+TGG | 0.387675 | 7:+1181528 | None:intergenic |
| TTTCACCAACTTGAACTCTT+GGG | 0.406910 | 7:+1183982 | None:intergenic |
| TTACAAATTCAGTGTCTTTG+AGG | 0.408232 | 7:-1184072 | MsG0780036004.01.T01:five_prime_UTR |
| GTCATTTGCTTGAGATGGAT+TGG | 0.409768 | 7:-1181276 | MsG0780036004.01.T01:three_prime_UTR |
| TGAATCCCTGATGTTGGTCT+TGG | 0.418940 | 7:+1181762 | None:intergenic |
| ATGAATCCTCTTGTGGTTTG+TGG | 0.422228 | 7:-1184120 | MsG0780036004.01.T01:five_prime_UTR |
| TGTCAACGAGAAAATGGTTC+TGG | 0.429526 | 7:-1181604 | MsG0780036004.01.T01:CDS |
| TACAAATTCAGTGTCTTTGA+GGG | 0.441798 | 7:-1184071 | MsG0780036004.01.T01:five_prime_UTR |
| GTAACAATAATCTAAACATT+TGG | 0.443901 | 7:-1181563 | MsG0780036004.01.T01:CDS |
| TGTTGTTTAGGCAACCTTGT+AGG | 0.444815 | 7:-1181725 | MsG0780036004.01.T01:CDS |
| GCCCTAGTAACCCGACTATG+AGG | 0.448204 | 7:-1183395 | MsG0780036004.01.T01:five_prime_UTR |
| CCCTCATAGTCGGGTTACTA+GGG | 0.451139 | 7:+1183394 | None:intergenic |
| AACGTTGTCCCCGTAGTAGC+TGG | 0.452584 | 7:+1182452 | None:intergenic |
| AATTCGTCATTTGCTTGAGA+TGG | 0.461753 | 7:-1181281 | MsG0780036004.01.T01:three_prime_UTR |
| TAGTCGGGTTACTAGGGCTT+GGG | 0.466193 | 7:+1183400 | None:intergenic |
| ATAGTCGGGTTACTAGGGCT+TGG | 0.468609 | 7:+1183399 | None:intergenic |
| TTGTCAGAGCATCCTCTCAA+TGG | 0.472558 | 7:+1181235 | None:intergenic |
| GAAAGTCCAAGACCAACATC+AGG | 0.479268 | 7:-1181768 | MsG0780036004.01.T01:CDS |
| TTCATAAATAATCAACTAAG+AGG | 0.483623 | 7:+1181196 | None:intergenic |
| TTGAAATAGAGAGCAGCAAC+AGG | 0.483630 | 7:+1181628 | None:intergenic |
| AACCAATATTCCAGCTACTA+CGG | 0.486996 | 7:-1182462 | MsG0780036004.01.T01:CDS |
| TCCCTCATAGTCGGGTTACT+AGG | 0.493000 | 7:+1183393 | None:intergenic |
| ACCAATATTCCAGCTACTAC+GGG | 0.499624 | 7:-1182461 | MsG0780036004.01.T01:CDS |
| GGAGGAAATAATGAGTCCTC+GGG | 0.501866 | 7:-1181325 | MsG0780036004.01.T01:three_prime_UTR |
| TTCACCAACTTGAACTCTTG+GGG | 0.502993 | 7:+1183983 | None:intergenic |
| TAAATCAATGAATCCTCTTG+TGG | 0.519287 | 7:-1184127 | MsG0780036004.01.T01:five_prime_UTR |
| GGTAGTCCCACTTACCATAC+AGG | 0.520129 | 7:+1183367 | None:intergenic |
| ATTGAAATTTGTCGCCATCC+AGG | 0.522452 | 7:+1181687 | None:intergenic |
| CAAAGACACTGAATTTGTAA+AGG | 0.523813 | 7:+1184075 | None:intergenic |
| GCTACTACGGGGACAACGTT+CGG | 0.524322 | 7:-1182449 | MsG0780036004.01.T01:intron |
| AGGCACAATATATTAGCTCC+TGG | 0.525696 | 7:-1181705 | MsG0780036004.01.T01:CDS |
| ACAGGTATTCCCTCATAGTC+GGG | 0.529711 | 7:+1183385 | None:intergenic |
| AGGAGGAAATAATGAGTCCT+CGG | 0.536424 | 7:-1181326 | MsG0780036004.01.T01:three_prime_UTR |
| GAGAAAATGGTTCTGGTGGA+AGG | 0.541973 | 7:-1181597 | MsG0780036004.01.T01:CDS |
| TACAGGTATTCCCTCATAGT+CGG | 0.545319 | 7:+1183384 | None:intergenic |
| CCAAAGCATATATAAAAGCA+TGG | 0.551237 | 7:-1184207 | None:intergenic |
| CAAGTTGGTGAAATGACCTC+AGG | 0.557127 | 7:-1183972 | MsG0780036004.01.T01:five_prime_UTR |
| GCTAATATATTGTGCCTACA+AGG | 0.564781 | 7:+1181711 | None:intergenic |
| TAAATTAATGTTAATCAGCA+AGG | 0.565532 | 7:-1181346 | MsG0780036004.01.T01:three_prime_UTR |
| CAACGAGAAAATGGTTCTGG+TGG | 0.575115 | 7:-1181601 | MsG0780036004.01.T01:CDS |
| ACACGTTGAATCCCTGATGT+TGG | 0.579833 | 7:+1181756 | None:intergenic |
| ACTATGAGGGAATACCTGTA+TGG | 0.580029 | 7:-1183381 | MsG0780036004.01.T01:intron |
| CAAAGCATATATAAAAGCAT+GGG | 0.591918 | 7:-1184206 | None:intergenic |
| TCACCAACTTGAACTCTTGG+GGG | 0.592554 | 7:+1183984 | None:intergenic |
| CCCTAGTAACCCGACTATGA+GGG | 0.593212 | 7:-1183394 | MsG0780036004.01.T01:five_prime_UTR |
| TGGTTCTGGTGGAAGGAGGA+TGG | 0.594121 | 7:-1181590 | MsG0780036004.01.T01:CDS |
| AATAAGTCTCTAATTTGAGT+CGG | 0.604020 | 7:+1181167 | None:intergenic |
| ATTACACCACAAACCACAAG+AGG | 0.610357 | 7:+1184114 | None:intergenic |
| ACAATATATTAGCTCCTGGA+TGG | 0.617111 | 7:-1181701 | MsG0780036004.01.T01:CDS |
| AAAGTCCAAGACCAACATCA+GGG | 0.617461 | 7:-1181767 | MsG0780036004.01.T01:CDS |
| TTGTTAGACAAACCATTGAG+AGG | 0.619851 | 7:-1181247 | MsG0780036004.01.T01:three_prime_UTR |
| CCTCAGGACTCTATACACTC+TGG | 0.640356 | 7:-1183956 | MsG0780036004.01.T01:intron |
| AAAATGGTTCTGGTGGAAGG+AGG | 0.645300 | 7:-1181594 | MsG0780036004.01.T01:CDS |
| AACAAAGAAGTCATCAACAG+TGG | 0.676788 | 7:-1184034 | MsG0780036004.01.T01:five_prime_UTR |
| GAGGAAATAATGAGTCCTCG+GGG | 0.679259 | 7:-1181324 | MsG0780036004.01.T01:three_prime_UTR |
| ATTAATGTTAATCAGCAAGG+AGG | 0.685191 | 7:-1181343 | MsG0780036004.01.T01:three_prime_UTR |
| CCAATATTCCAGCTACTACG+GGG | 0.711639 | 7:-1182460 | MsG0780036004.01.T01:CDS |
| CCAGAGTGTATAGAGTCCTG+AGG | 0.732541 | 7:+1183956 | None:intergenic |
| AGGAAATAATGAGTCCTCGG+GGG | 0.734529 | 7:-1181323 | MsG0780036004.01.T01:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACTAAATAATTTATAGAA+TGG | - | Chr7:1182083-1182102 | MsG0780036004.01.T01:intron | 10.0% |
| !! | TATTATGTATGTATAAATTA+TGG | - | Chr7:1183494-1183513 | MsG0780036004.01.T01:intron | 10.0% |
| !! | TTAATATTCAAATTTAACAT+TGG | + | Chr7:1183067-1183086 | None:intergenic | 10.0% |
| !!! | AGTTTTTTATTTTATTTGAA+AGG | + | Chr7:1183899-1183918 | None:intergenic | 10.0% |
| !!! | ATGATAATAGTATTTTTTTT+GGG | + | Chr7:1183948-1183967 | None:intergenic | 10.0% |
| !!! | TATGATAATAGTATTTTTTT+TGG | + | Chr7:1183949-1183968 | None:intergenic | 10.0% |
| !! | TATAAAAAAAAAGTCGAAAA+TGG | - | Chr7:1182505-1182524 | MsG0780036004.01.T01:intron | 15.0% |
| !!! | AAAATTTATTTTCAAGTTTG+GGG | + | Chr7:1181621-1181640 | None:intergenic | 15.0% |
| !!! | AATTTGTATCTTATTTGATT+TGG | - | Chr7:1184196-1184215 | MsG0780036004.01.T01:five_prime_UTR | 15.0% |
| !!! | ATTTTGCAATATGTATATTT+AGG | + | Chr7:1181660-1181679 | None:intergenic | 15.0% |
| !!! | GAAAATTTATTTTCAAGTTT+GGG | + | Chr7:1181622-1181641 | None:intergenic | 15.0% |
| !!! | TAGTGTATATTTTATATTGA+AGG | + | Chr7:1183814-1183833 | None:intergenic | 15.0% |
| !!! | TGAAAATTTATTTTCAAGTT+TGG | + | Chr7:1181623-1181642 | None:intergenic | 15.0% |
| !!! | TTTATTTATTTTTCATGAGT+CGG | + | Chr7:1183016-1183035 | None:intergenic | 15.0% |
| !! | ATTACAACAAGGATATAAAT+GGG | + | Chr7:1182987-1183006 | None:intergenic | 20.0% |
| !! | CAAAGAATTACCTATATAAA+TGG | - | Chr7:1181461-1181480 | MsG0780036004.01.T01:three_prime_UTR | 20.0% |
| !! | CATACAAATTAAACCTAATT+GGG | - | Chr7:1181791-1181810 | MsG0780036004.01.T01:CDS | 20.0% |
| !! | GTAACAATAATCTAAACATT+TGG | - | Chr7:1183760-1183779 | MsG0780036004.01.T01:intron | 20.0% |
| !! | TAAATTAATGTTAATCAGCA+AGG | - | Chr7:1183977-1183996 | MsG0780036004.01.T01:five_prime_UTR | 20.0% |
| !! | TATTACAACAAGGATATAAA+TGG | + | Chr7:1182988-1183007 | None:intergenic | 20.0% |
| !! | TGAAATGAAAAAAAACAGTT+AGG | - | Chr7:1181732-1181751 | MsG0780036004.01.T01:CDS | 20.0% |
| !! | TTCATAAATAATCAACTAAG+AGG | + | Chr7:1184130-1184149 | None:intergenic | 20.0% |
| !!! | AAATTATGAACCCAATTTTA+AGG | - | Chr7:1182954-1182973 | MsG0780036004.01.T01:intron | 20.0% |
| !!! | AAATTTATTTTCAAGTTTGG+GGG | + | Chr7:1181620-1181639 | None:intergenic | 20.0% |
| !!! | AACTGTTTTTTTTCATTTCA+AGG | + | Chr7:1181732-1181751 | None:intergenic | 20.0% |
| !!! | ACTGTTTTTTTTCATTTCAA+GGG | + | Chr7:1181731-1181750 | None:intergenic | 20.0% |
| !!! | ATACAAATTTTTCATAGCAT+CGG | + | Chr7:1184185-1184204 | None:intergenic | 20.0% |
| !!! | ATATTTTATATTGAAGGACA+AGG | + | Chr7:1183808-1183827 | None:intergenic | 20.0% |
| !!! | GTTGATCAAATTAAAGTTTT+TGG | + | Chr7:1181578-1181597 | None:intergenic | 20.0% |
| !!! | TTATATTTTTTTGACTGATG+AGG | - | Chr7:1183251-1183270 | MsG0780036004.01.T01:intron | 20.0% |
| !!! | TTGAGCTTACATTTTTTTTA+CGG | - | Chr7:1183100-1183119 | MsG0780036004.01.T01:intron | 20.0% |
| ! | AAATATTTAACAAGCCCATA+TGG | + | Chr7:1181981-1182000 | None:intergenic | 25.0% |
| ! | AACATGATATAGTTCATGTT+TGG | - | Chr7:1182333-1182352 | MsG0780036004.01.T01:intron | 25.0% |
| ! | AAGTATAGATTTCTGAATGT+TGG | + | Chr7:1183329-1183348 | None:intergenic | 25.0% |
| ! | AATAAGTCTCTAATTTGAGT+CGG | + | Chr7:1184159-1184178 | None:intergenic | 25.0% |
| ! | AATATTTAACAAGCCCATAT+GGG | + | Chr7:1181980-1181999 | None:intergenic | 25.0% |
| ! | ATGGTGTTTGAATTAATTGT+AGG | - | Chr7:1183513-1183532 | MsG0780036004.01.T01:intron | 25.0% |
| ! | CCATACAAATTAAACCTAAT+TGG | - | Chr7:1181790-1181809 | MsG0780036004.01.T01:CDS | 25.0% |
| ! | TATTAAGAATGATCCCAATT+AGG | + | Chr7:1181807-1181826 | None:intergenic | 25.0% |
| !!! | AATTTATTTTCAAGTTTGGG+GGG | + | Chr7:1181619-1181638 | None:intergenic | 25.0% |
| !!! | ATTAGGTTTAATTTGTATGG+AGG | + | Chr7:1181790-1181809 | None:intergenic | 25.0% |
| !!! | CCAATTAGGTTTAATTTGTA+TGG | + | Chr7:1181793-1181812 | None:intergenic | 25.0% |
| !!! | CTTACATTTTTTTTACGGAT+GGG | - | Chr7:1183105-1183124 | MsG0780036004.01.T01:intron | 25.0% |
| !!! | GAATGGTTTTATTCTATAAG+TGG | + | Chr7:1181541-1181560 | None:intergenic | 25.0% |
| !!! | GGATATGTTTGGAATTTTTT+TGG | + | Chr7:1183787-1183806 | None:intergenic | 25.0% |
| !!! | GTGTAATATTTGTGTTGTTT+AGG | - | Chr7:1183586-1183605 | MsG0780036004.01.T01:intron | 25.0% |
| !!! | TCAAATTAAAGTTTTTGGCT+AGG | + | Chr7:1181573-1181592 | None:intergenic | 25.0% |
| !!! | TTACATTTTTTTTACGGATG+GGG | - | Chr7:1183106-1183125 | MsG0780036004.01.T01:intron | 25.0% |
| AAGTAGTAAACTTGAGAACT+AGG | + | Chr7:1182120-1182139 | None:intergenic | 30.0% | |
| AATCCTTAATCCGATAGTTA+TGG | - | Chr7:1182219-1182238 | MsG0780036004.01.T01:intron | 30.0% | |
| ATTAATGTTAATCAGCAAGG+AGG | - | Chr7:1183980-1183999 | MsG0780036004.01.T01:five_prime_UTR | 30.0% | |
| ATTGGTTACCATCCTAATTA+AGG | + | Chr7:1182848-1182867 | None:intergenic | 30.0% | |
| CAAAGACACTGAATTTGTAA+AGG | + | Chr7:1181251-1181270 | None:intergenic | 30.0% | |
| CTCAAAAACCTAGAAAGAAA+AGG | + | Chr7:1181864-1181883 | None:intergenic | 30.0% | |
| TAAATCAATGAATCCTCTTG+TGG | - | Chr7:1181196-1181215 | MsG0780036004.01.T01:three_prime_UTR | 30.0% | |
| TAACTATCGGATTAAGGATT+TGG | + | Chr7:1182219-1182238 | None:intergenic | 30.0% | |
| TACAAATTCAGTGTCTTTGA+GGG | - | Chr7:1181252-1181271 | MsG0780036004.01.T01:three_prime_UTR | 30.0% | |
| TACCCCTTAAGAGAAAATTA+GGG | - | Chr7:1181506-1181525 | MsG0780036004.01.T01:CDS | 30.0% | |
| TAGACAGTGAGAATAAAGTA+TGG | + | Chr7:1182652-1182671 | None:intergenic | 30.0% | |
| TTACAAATTCAGTGTCTTTG+AGG | - | Chr7:1181251-1181270 | MsG0780036004.01.T01:three_prime_UTR | 30.0% | |
| TTCAATTGTCAACGAGAAAA+TGG | - | Chr7:1183713-1183732 | MsG0780036004.01.T01:intron | 30.0% | |
| TTTGCAGAAGTTTACAATCT+TGG | - | Chr7:1183668-1183687 | MsG0780036004.01.T01:intron | 30.0% | |
| ! | ATGCTTAATTTTGTGTCAAC+TGG | - | Chr7:1182577-1182596 | MsG0780036004.01.T01:intron | 30.0% |
| ! | GATTAAAGCCTTTTCTTTCT+AGG | - | Chr7:1181853-1181872 | MsG0780036004.01.T01:intron | 30.0% |
| ! | GTTATAGTCTTACATAAGCA+TGG | + | Chr7:1182043-1182062 | None:intergenic | 30.0% |
| ! | TGACCCTAATTTTCTCTTAA+GGG | + | Chr7:1181512-1181531 | None:intergenic | 30.0% |
| ! | TGTGATTTGGAAACTTTGTT+TGG | - | Chr7:1182772-1182791 | MsG0780036004.01.T01:intron | 30.0% |
| ! | TTGACCCTAATTTTCTCTTA+AGG | + | Chr7:1181513-1181532 | None:intergenic | 30.0% |
| !! | GAACCCAATTTTAAGGATAA+CGG | - | Chr7:1182961-1182980 | MsG0780036004.01.T01:intron | 30.0% |
| !! | GTTTAATTTGTATGGAGGTA+AGG | + | Chr7:1181785-1181804 | None:intergenic | 30.0% |
| !! | TGCTTTGATAATTTGCTCAT+TGG | + | Chr7:1181155-1181174 | None:intergenic | 30.0% |
| !!! | ATTTTTTTGACTGATGAGGA+TGG | - | Chr7:1183255-1183274 | MsG0780036004.01.T01:intron | 30.0% |
| !!! | CTTACATTTTTTGACTGATG+AGG | - | Chr7:1183178-1183197 | MsG0780036004.01.T01:intron | 30.0% |
| !!! | GCTTACATTTTTTTTACGGA+TGG | - | Chr7:1183104-1183123 | MsG0780036004.01.T01:intron | 30.0% |
| !!! | TTTCTAGGTTTTTGAGTTTG+TGG | - | Chr7:1181868-1181887 | MsG0780036004.01.T01:intron | 30.0% |
| !!! | TTTTTTTCATTTCAAGGGTG+TGG | + | Chr7:1181726-1181745 | None:intergenic | 30.0% |
| !!! | TTTTTTTTTCCTTCCTTCGT+TGG | - | Chr7:1182820-1182839 | MsG0780036004.01.T01:intron | 30.0% |
| AACAAAGAAGTCATCAACAG+TGG | - | Chr7:1181289-1181308 | MsG0780036004.01.T01:three_prime_UTR | 35.0% | |
| AACCAATATTCCAGCTACTA+CGG | - | Chr7:1182861-1182880 | MsG0780036004.01.T01:intron | 35.0% | |
| AATTCGTCATTTGCTTGAGA+TGG | - | Chr7:1184042-1184061 | MsG0780036004.01.T01:five_prime_UTR | 35.0% | |
| ACAATATATTAGCTCCTGGA+TGG | - | Chr7:1183622-1183641 | MsG0780036004.01.T01:intron | 35.0% | |
| ATTTCACCAACTTGAACTCT+TGG | + | Chr7:1181345-1181364 | None:intergenic | 35.0% | |
| CATCCATAACTATCGGATTA+AGG | + | Chr7:1182225-1182244 | None:intergenic | 35.0% | |
| CTACCCCTTAAGAGAAAATT+AGG | - | Chr7:1181505-1181524 | MsG0780036004.01.T01:CDS | 35.0% | |
| CTAGGATCATCCATAACTAT+CGG | + | Chr7:1182232-1182251 | None:intergenic | 35.0% | |
| GCTAATATATTGTGCCTACA+AGG | + | Chr7:1183615-1183634 | None:intergenic | 35.0% | |
| GGGTAGCTTTCTTATATCTT+CGG | + | Chr7:1181491-1181510 | None:intergenic | 35.0% | |
| GGTAGCTTTCTTATATCTTC+GGG | + | Chr7:1181490-1181509 | None:intergenic | 35.0% | |
| GTAGCTTTCTTATATCTTCG+GGG | + | Chr7:1181489-1181508 | None:intergenic | 35.0% | |
| GTCGGAACTATATTACAACA+AGG | + | Chr7:1182998-1183017 | None:intergenic | 35.0% | |
| GTGTACATATGTGTGTGATT+TGG | - | Chr7:1182759-1182778 | MsG0780036004.01.T01:intron | 35.0% | |
| TTGAAGGACAAGGATATGTT+TGG | + | Chr7:1183798-1183817 | None:intergenic | 35.0% | |
| TTGTTAGACAAACCATTGAG+AGG | - | Chr7:1184076-1184095 | MsG0780036004.01.T01:five_prime_UTR | 35.0% | |
| TTTCACCAACTTGAACTCTT+GGG | + | Chr7:1181344-1181363 | None:intergenic | 35.0% | |
| ! | AGTTTGTGGCACTAATTTTC+AGG | - | Chr7:1181882-1181901 | MsG0780036004.01.T01:intron | 35.0% |
| ! | GACCCTAATTTTCTCTTAAG+GGG | + | Chr7:1181511-1181530 | None:intergenic | 35.0% |
| ! | TGGTGTAATTGGAGATGTTT+TGG | - | Chr7:1181223-1181242 | MsG0780036004.01.T01:three_prime_UTR | 35.0% |
| !!! | CATTTTTTGACTGATGAGGA+TGG | - | Chr7:1183182-1183201 | MsG0780036004.01.T01:intron | 35.0% |
| !!! | TGGCACTAATTTTCAGGTAA+TGG | - | Chr7:1181888-1181907 | MsG0780036004.01.T01:intron | 35.0% |
| AAAGTCCAAGACCAACATCA+GGG | - | Chr7:1183556-1183575 | MsG0780036004.01.T01:intron | 40.0% | |
| ACCAATATTCCAGCTACTAC+GGG | - | Chr7:1182862-1182881 | MsG0780036004.01.T01:intron | 40.0% | |
| ACTATGAGGGAATACCTGTA+TGG | - | Chr7:1181942-1181961 | MsG0780036004.01.T01:intron | 40.0% | |
| AGGAGGAAATAATGAGTCCT+CGG | - | Chr7:1183997-1184016 | MsG0780036004.01.T01:five_prime_UTR | 40.0% | |
| AGGCACAATATATTAGCTCC+TGG | - | Chr7:1183618-1183637 | MsG0780036004.01.T01:intron | 40.0% | |
| ATGAATCCTCTTGTGGTTTG+TGG | - | Chr7:1181203-1181222 | MsG0780036004.01.T01:three_prime_UTR | 40.0% | |
| ATTAAGGATCCAACGAAGGA+AGG | + | Chr7:1182832-1182851 | None:intergenic | 40.0% | |
| ATTACACCACAAACCACAAG+AGG | + | Chr7:1181212-1181231 | None:intergenic | 40.0% | |
| ATTGAAATTTGTCGCCATCC+AGG | + | Chr7:1183639-1183658 | None:intergenic | 40.0% | |
| CCTAATTAAGGATCCAACGA+AGG | + | Chr7:1182836-1182855 | None:intergenic | 40.0% | |
| CCTTCGTTGGATCCTTAATT+AGG | - | Chr7:1182833-1182852 | MsG0780036004.01.T01:intron | 40.0% | |
| CGTTGGATCCTTAATTAGGA+TGG | - | Chr7:1182837-1182856 | MsG0780036004.01.T01:intron | 40.0% | |
| CTTAACTAGTCACATGTGCT+TGG | + | Chr7:1182310-1182329 | None:intergenic | 40.0% | |
| CTTACATAAGCATGGTGTCT+TGG | + | Chr7:1182035-1182054 | None:intergenic | 40.0% | |
| CTTCGGGGATCCATTTATAT+AGG | + | Chr7:1181474-1181493 | None:intergenic | 40.0% | |
| GGAATACCTGTATGGTAAGT+GGG | - | Chr7:1181950-1181969 | MsG0780036004.01.T01:intron | 40.0% | |
| GGGCCGTTATCCTTAAAATT+GGG | + | Chr7:1182967-1182986 | None:intergenic | 40.0% | |
| GGTACGTGCAAAATTCTCTT+GGG | - | Chr7:1182895-1182914 | MsG0780036004.01.T01:intron | 40.0% | |
| GTCATTTGCTTGAGATGGAT+TGG | - | Chr7:1184047-1184066 | MsG0780036004.01.T01:five_prime_UTR | 40.0% | |
| TACAGGTATTCCCTCATAGT+CGG | + | Chr7:1181942-1181961 | None:intergenic | 40.0% | |
| TGGGCCGTTATCCTTAAAAT+TGG | + | Chr7:1182968-1182987 | None:intergenic | 40.0% | |
| TGTCAACGAGAAAATGGTTC+TGG | - | Chr7:1183719-1183738 | MsG0780036004.01.T01:intron | 40.0% | |
| TTCACCAACTTGAACTCTTG+GGG | + | Chr7:1181343-1181362 | None:intergenic | 40.0% | |
| TTGAAATAGAGAGCAGCAAC+AGG | + | Chr7:1183698-1183717 | None:intergenic | 40.0% | |
| ! | CTTGTGGTTTGTGGTGTAAT+TGG | - | Chr7:1181212-1181231 | MsG0780036004.01.T01:three_prime_UTR | 40.0% |
| ! | TGTTGTTTAGGCAACCTTGT+AGG | - | Chr7:1183598-1183617 | MsG0780036004.01.T01:intron | 40.0% |
| !! | TTTTCATTTCAAGGGTGTGG+AGG | + | Chr7:1181723-1181742 | None:intergenic | 40.0% |
| !!! | GTTTTTGGCTAGGACAAAGA+AGG | + | Chr7:1181563-1181582 | None:intergenic | 40.0% |
| ACACGTTGAATCCCTGATGT+TGG | + | Chr7:1183570-1183589 | None:intergenic | 45.0% | |
| ACAGGTATTCCCTCATAGTC+GGG | + | Chr7:1181941-1181960 | None:intergenic | 45.0% | |
| AGGAAATAATGAGTCCTCGG+GGG | - | Chr7:1184000-1184019 | MsG0780036004.01.T01:five_prime_UTR | 45.0% | |
| AGGACTCTATACACTCTGGT+TGG | - | Chr7:1181371-1181390 | MsG0780036004.01.T01:intron | 45.0% | |
| CCAATATTCCAGCTACTACG+GGG | - | Chr7:1182863-1182882 | MsG0780036004.01.T01:intron | 45.0% | |
| CGGTACGTGCAAAATTCTCT+TGG | - | Chr7:1182894-1182913 | MsG0780036004.01.T01:intron | 45.0% | |
| GAAAGTCCAAGACCAACATC+AGG | - | Chr7:1183555-1183574 | MsG0780036004.01.T01:intron | 45.0% | |
| GAGGAAATAATGAGTCCTCG+GGG | - | Chr7:1183999-1184018 | MsG0780036004.01.T01:five_prime_UTR | 45.0% | |
| GGAGGAAATAATGAGTCCTC+GGG | - | Chr7:1183998-1184017 | MsG0780036004.01.T01:five_prime_UTR | 45.0% | |
| GGGAATACCTGTATGGTAAG+TGG | - | Chr7:1181949-1181968 | MsG0780036004.01.T01:intron | 45.0% | |
| GTAAGTGGGACTACCCATAT+GGG | - | Chr7:1181964-1181983 | MsG0780036004.01.T01:intron | 45.0% | |
| TCACCAACTTGAACTCTTGG+GGG | + | Chr7:1181342-1181361 | None:intergenic | 45.0% | |
| TGGCTAGGACAAAGAAGGAA+TGG | + | Chr7:1181558-1181577 | None:intergenic | 45.0% | |
| TGGGGGTTGACTATTTGAGA+GGG | + | Chr7:1181325-1181344 | None:intergenic | 45.0% | |
| TTGGGGGTTGACTATTTGAG+AGG | + | Chr7:1181326-1181345 | None:intergenic | 45.0% | |
| ! | TGAATCCCTGATGTTGGTCT+TGG | + | Chr7:1183564-1183583 | None:intergenic | 45.0% |
| ! | TTGTCAGAGCATCCTCTCAA+TGG | + | Chr7:1184091-1184110 | None:intergenic | 45.0% |
| !! | AAAATGGTTCTGGTGGAAGG+AGG | - | Chr7:1183729-1183748 | MsG0780036004.01.T01:intron | 45.0% |
| !! | CAACGAGAAAATGGTTCTGG+TGG | - | Chr7:1183722-1183741 | MsG0780036004.01.T01:intron | 45.0% |
| !! | CAAGTTGGTGAAATGACCTC+AGG | - | Chr7:1181351-1181370 | MsG0780036004.01.T01:three_prime_UTR | 45.0% |
| !! | GAGAAAATGGTTCTGGTGGA+AGG | - | Chr7:1183726-1183745 | MsG0780036004.01.T01:intron | 45.0% |
| !! | TAAAAAAAATATATATTACT+AGG | + | Chr7:1182250-1182269 | None:intergenic | 5.0% |
| !!! | ACATATATTTTTTTTTTTTT+TGG | - | Chr7:1182673-1182692 | MsG0780036004.01.T01:intron | 5.0% |
| !!! | CATATATTTTTTTTTTTTTT+GGG | - | Chr7:1182674-1182693 | MsG0780036004.01.T01:intron | 5.0% |
| AACTAAGCTCATATCCCCCG+AGG | + | Chr7:1184017-1184036 | None:intergenic | 50.0% | |
| ATAGTCGGGTTACTAGGGCT+TGG | + | Chr7:1181927-1181946 | None:intergenic | 50.0% | |
| CAACCCCCAAGAGTTCAAGT+TGG | - | Chr7:1181336-1181355 | MsG0780036004.01.T01:three_prime_UTR | 50.0% | |
| CCAGAGTGTATAGAGTCCTG+AGG | + | Chr7:1181370-1181389 | None:intergenic | 50.0% | |
| CCCCGTAGTAGCTGGAATAT+TGG | + | Chr7:1182866-1182885 | None:intergenic | 50.0% | |
| CCCTAGTAACCCGACTATGA+GGG | - | Chr7:1181929-1181948 | MsG0780036004.01.T01:intron | 50.0% | |
| CCCTCATAGTCGGGTTACTA+GGG | + | Chr7:1181932-1181951 | None:intergenic | 50.0% | |
| CCTCAGGACTCTATACACTC+TGG | - | Chr7:1181367-1181386 | MsG0780036004.01.T01:intron | 50.0% | |
| GGTAAGTGGGACTACCCATA+TGG | - | Chr7:1181963-1181982 | MsG0780036004.01.T01:intron | 50.0% | |
| GGTAGTCCCACTTACCATAC+AGG | + | Chr7:1181959-1181978 | None:intergenic | 50.0% | |
| TAGTCGGGTTACTAGGGCTT+GGG | + | Chr7:1181926-1181945 | None:intergenic | 50.0% | |
| TCCCTCATAGTCGGGTTACT+AGG | + | Chr7:1181933-1181952 | None:intergenic | 50.0% | |
| ! | TCATTTCAAGGGTGTGGAGG+CGG | + | Chr7:1181720-1181739 | None:intergenic | 50.0% |
| AACGTTGTCCCCGTAGTAGC+TGG | + | Chr7:1182874-1182893 | None:intergenic | 55.0% | |
| GCCCTAGTAACCCGACTATG+AGG | - | Chr7:1181928-1181947 | MsG0780036004.01.T01:intron | 55.0% | |
| GCTACTACGGGGACAACGTT+CGG | - | Chr7:1182874-1182893 | MsG0780036004.01.T01:intron | 55.0% | |
| GTTACTAGGGCTTGGGCATC+AGG | + | Chr7:1181919-1181938 | None:intergenic | 55.0% | |
| !! | TGGTTCTGGTGGAAGGAGGA+TGG | - | Chr7:1183733-1183752 | MsG0780036004.01.T01:intron | 55.0% |
| ! | TTCAAGGGTGTGGAGGCGGC+TGG | + | Chr7:1181716-1181735 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 1181126 | 1184219 | 1181126 | ID=MsG0780036004.01;Name=MsG0780036004.01 |
| Chr7 | mRNA | 1181126 | 1184219 | 1181126 | ID=MsG0780036004.01.T01;Parent=MsG0780036004.01;Name=MsG0780036004.01.T01;_AED=0.30;_eAED=0.30;_QI=324|1|1|1|0|0|5|277|122 |
| Chr7 | exon | 1181126 | 1181377 | 1181126 | ID=MsG0780036004.01.T01:exon:2224;Parent=MsG0780036004.01.T01 |
| Chr7 | exon | 1181457 | 1181810 | 1181457 | ID=MsG0780036004.01.T01:exon:2223;Parent=MsG0780036004.01.T01 |
| Chr7 | exon | 1182450 | 1182490 | 1182450 | ID=MsG0780036004.01.T01:exon:2222;Parent=MsG0780036004.01.T01 |
| Chr7 | exon | 1183382 | 1183441 | 1183382 | ID=MsG0780036004.01.T01:exon:2221;Parent=MsG0780036004.01.T01 |
| Chr7 | exon | 1183957 | 1184219 | 1183957 | ID=MsG0780036004.01.T01:exon:2220;Parent=MsG0780036004.01.T01 |
| Chr7 | five_prime_UTR | 1183957 | 1184219 | 1183957 | ID=MsG0780036004.01.T01:five_prime_utr;Parent=MsG0780036004.01.T01 |
| Chr7 | five_prime_UTR | 1183382 | 1183441 | 1183382 | ID=MsG0780036004.01.T01:five_prime_utr;Parent=MsG0780036004.01.T01 |
| Chr7 | five_prime_UTR | 1182490 | 1182490 | 1182490 | ID=MsG0780036004.01.T01:five_prime_utr;Parent=MsG0780036004.01.T01 |
| Chr7 | CDS | 1182450 | 1182489 | 1182450 | ID=MsG0780036004.01.T01:cds;Parent=MsG0780036004.01.T01 |
| Chr7 | CDS | 1181482 | 1181810 | 1181482 | ID=MsG0780036004.01.T01:cds;Parent=MsG0780036004.01.T01 |
| Chr7 | three_prime_UTR | 1181457 | 1181481 | 1181457 | ID=MsG0780036004.01.T01:three_prime_utr;Parent=MsG0780036004.01.T01 |
| Chr7 | three_prime_UTR | 1181126 | 1181377 | 1181126 | ID=MsG0780036004.01.T01:three_prime_utr;Parent=MsG0780036004.01.T01 |
| Chr7 | mRNA | 1181482 | 1181832 | 1181482 | ID=MsG0780036004.01.T02;Parent=MsG0780036004.01;Name=MsG0780036004.01.T02;_AED=0.43;_eAED=0.43;_QI=0|-1|0|1|-1|0|1|0|116 |
| Chr7 | exon | 1181482 | 1181832 | 1181482 | ID=MsG0780036004.01.T02:exon:2225;Parent=MsG0780036004.01.T02 |
| Chr7 | CDS | 1181482 | 1181832 | 1181482 | ID=MsG0780036004.01.T02:cds;Parent=MsG0780036004.01.T02 |
| Chr7 | mRNA | 1181482 | 1181613 | 1181482 | ID=MsG0780036004.01.T03;Parent=MsG0780036004.01;Name=MsG0780036004.01.T03;_AED=0.47;_eAED=0.47;_QI=0|-1|0|1|-1|0|1|0|43 |
| Chr7 | exon | 1181482 | 1181613 | 1181482 | ID=MsG0780036004.01.T03:exon:2226;Parent=MsG0780036004.01.T03 |
| Chr7 | CDS | 1181482 | 1181613 | 1181482 | ID=MsG0780036004.01.T03:cds;Parent=MsG0780036004.01.T03 |
| Chr7 | mRNA | 1181582 | 1181704 | 1181582 | ID=MsG0780036004.01.T04;Parent=MsG0780036004.01;Name=MsG0780036004.01.T04;_AED=0.47;_eAED=0.47;_QI=0|-1|0|1|-1|0|1|0|40 |
| Chr7 | exon | 1181582 | 1181704 | 1181582 | ID=MsG0780036004.01.T04:exon:2227;Parent=MsG0780036004.01.T04 |
| Chr7 | CDS | 1181582 | 1181704 | 1181582 | ID=MsG0780036004.01.T04:cds;Parent=MsG0780036004.01.T04 |
| Gene Sequence |
| Protein sequence |
