AlfalfaGEDB | MsG0780035995.01

M. sativa cultivar ZhongmuNo.1 / MsG0780035995.01

KEGG: K16223
GO: -
PFAM: PF01161

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780035995.01.T02	MCI82536.1	75.676	37	9	0	1	37	11	47	4.37E-12	63.5
MsG0780035995.01.T01	XP_003621060.1	86.585	82	11	0	1	82	70	151	1.21E-46	157

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780035995.01.T01	Q8VWH2	63.415	82	30	0	1	82	70	151	3.40E-35	121
MsG0780035995.01.T02	Q9SXZ2	73.529	34	9	0	2	35	142	175	9.51E-13	60.8

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780035995.01.T01	F8T7T3	86.585	82	11	0	1	82	70	151	5.77e-47	157
MsG0780035995.01.T02	A0A392V2Q6	75.676	37	9	0	1	37	11	47	2.09e-12	63.5

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080047999.01	MsG0780035995.01	-0.809156	2.174994e-50	1.267462e-47
MsG0080048560.01	MsG0780035995.01	0.813040	3.130040e-51	2.022045e-48
MsG0080048694.01	MsG0780035995.01	0.802428	5.637675e-49	2.761001e-46
MsG0080048695.01	MsG0780035995.01	0.803064	4.166298e-49	2.073548e-46
MsG0080048813.01	MsG0780035995.01	0.818880	1.555740e-52	1.178889e-49
MsG0080048992.01	MsG0780035995.01	0.818998	1.462599e-52	1.112010e-49
MsG0080049016.01	MsG0780035995.01	0.815673	8.195555e-52	5.687085e-49
MsG0080049018.01	MsG0780035995.01	0.845849	3.142143e-59	5.306908e-56
MsG0080049023.01	MsG0780035995.01	0.836081	1.153458e-56	1.438155e-53
MsG0180000417.01	MsG0780035995.01	0.849598	2.918753e-60	5.561625e-57
MsG0180000719.01	MsG0780035995.01	0.851084	1.117547e-60	2.235940e-57
MsG0180001054.01	MsG0780035995.01	0.836399	9.573617e-57	1.205058e-53
MsG0180001072.01	MsG0780035995.01	0.803930	2.755227e-49	1.402306e-46
MsG0180001615.01	MsG0780035995.01	0.818359	2.042871e-52	1.525921e-49
MsG0180001925.01	MsG0780035995.01	0.807347	5.283360e-50	2.935820e-47
MsG0180002099.01	MsG0780035995.01	0.827909	1.205561e-54	1.179932e-51
MsG0180002425.01	MsG0780035995.01	0.804770	1.841977e-49	9.579281e-47
MsG0180002463.01	MsG0780035995.01	0.827011	1.980194e-54	1.887875e-51
MsG0180003350.01	MsG0780035995.01	0.817535	3.135964e-52	2.289828e-49
MsG0180003880.01	MsG0780035995.01	0.803448	3.469595e-49	1.743995e-46
MsG0180004124.01	MsG0780035995.01	0.803584	3.251795e-49	1.640337e-46
MsG0180004125.01	MsG0780035995.01	0.804199	2.422167e-49	1.241215e-46
MsG0180004502.01	MsG0780035995.01	0.816735	4.745512e-52	3.389926e-49
MsG0180004553.01	MsG0780035995.01	0.801340	9.431224e-49	4.492890e-46
MsG0180004580.01	MsG0780035995.01	0.801607	8.312015e-49	3.986379e-46
MsG0180004581.01	MsG0780035995.01	0.803540	3.320801e-49	1.673220e-46
MsG0180004586.01	MsG0780035995.01	0.846760	1.773783e-59	3.085138e-56
MsG0180004731.01	MsG0780035995.01	0.807337	5.311129e-50	2.950462e-47
MsG0180004761.01	MsG0780035995.01	0.810127	1.345330e-50	8.043394e-48
MsG0180004773.01	MsG0780035995.01	0.853185	2.823498e-61	6.049187e-58
MsG0180005791.01	MsG0780035995.01	0.866569	2.590730e-65	8.772343e-62
MsG0180006212.01	MsG0780035995.01	0.801823	7.505588e-49	3.619563e-46
MsG0180006227.01	MsG0780035995.01	0.822434	2.373383e-53	1.986434e-50
MsG0280006381.01	MsG0780035995.01	0.817163	3.803261e-52	2.748931e-49
MsG0280010583.01	MsG0780035995.01	0.822843	1.906778e-53	1.614498e-50
MsG0280010994.01	MsG0780035995.01	0.842932	1.911159e-58	2.942481e-55
MsG0280011449.01	MsG0780035995.01	0.809348	1.977780e-50	1.158493e-47
MsG0380013114.01	MsG0780035995.01	0.812813	3.509704e-51	2.253476e-48
MsG0380013473.01	MsG0780035995.01	0.804042	2.612363e-49	1.333320e-46
MsG0380013928.01	MsG0780035995.01	0.804639	1.961347e-49	1.016520e-46
MsG0380014029.01	MsG0780035995.01	0.801847	7.423424e-49	3.582094e-46
MsG0380014129.01	MsG0780035995.01	0.836295	1.017480e-56	1.276955e-53
MsG0380014639.01	MsG0780035995.01	0.811884	5.598508e-51	3.506550e-48
MsG0380014642.01	MsG0780035995.01	0.802596	5.204396e-49	2.559689e-46
MsG0380014735.01	MsG0780035995.01	0.800504	1.396979e-48	6.515504e-46
MsG0380014802.01	MsG0780035995.01	-0.801471	8.863200e-49	4.236303e-46
MsG0680030875.01	MsG0780035995.01	0.800829	1.199565e-48	5.641134e-46
MsG0680031866.01	MsG0780035995.01	0.815029	1.139731e-51	7.770561e-49
MsG0680032197.01	MsG0780035995.01	0.817229	3.675553e-52	2.661350e-49
MsG0680035368.01	MsG0780035995.01	0.839161	1.869218e-57	2.559433e-54
MsG0480018628.01	MsG0780035995.01	0.803691	3.089233e-49	1.562546e-46
MsG0480018709.01	MsG0780035995.01	0.809094	2.242001e-50	1.304344e-47
MsG0480018713.01	MsG0780035995.01	0.843324	1.503105e-58	2.343623e-55
MsG0480020550.01	MsG0780035995.01	0.847884	8.715135e-60	1.571224e-56
MsG0480021327.01	MsG0780035995.01	0.819489	1.130465e-52	8.711893e-50
MsG0480021331.01	MsG0780035995.01	0.826665	2.394919e-54	2.260604e-51
MsG0480021563.01	MsG0780035995.01	0.845991	2.874522e-59	4.877156e-56
MsG0480022412.01	MsG0780035995.01	0.803178	3.946628e-49	1.970064e-46
MsG0480022581.01	MsG0780035995.01	0.811128	8.174409e-51	5.018760e-48
MsG0480022591.01	MsG0780035995.01	0.853772	1.915104e-61	4.184125e-58
MsG0480022626.01	MsG0780035995.01	0.808690	2.736419e-50	1.574887e-47
MsG0480022935.01	MsG0780035995.01	0.824016	1.014069e-53	8.874599e-51
MsG0480023006.01	MsG0780035995.01	0.818001	2.460928e-52	1.820090e-49
MsG0480023056.01	MsG0780035995.01	0.832596	8.639701e-56	9.702149e-53
MsG0480023152.01	MsG0780035995.01	0.832459	9.339157e-56	1.044507e-52
MsG0480023217.01	MsG0780035995.01	0.807103	5.952576e-50	3.286547e-47
MsG0480023319.01	MsG0780035995.01	0.821096	4.842481e-53	3.902505e-50
MsG0480023577.01	MsG0780035995.01	0.837897	3.962846e-57	5.220753e-54
MsG0480023695.01	MsG0780035995.01	0.838516	2.745440e-57	3.686002e-54
MsG0580024372.01	MsG0780035995.01	0.823064	1.693375e-53	1.442835e-50
MsG0580024442.01	MsG0780035995.01	0.818119	2.314709e-52	1.717463e-49
MsG0580024448.01	MsG0780035995.01	0.813263	2.796082e-51	1.817211e-48
MsG0580024493.01	MsG0780035995.01	0.802056	6.723211e-49	3.261505e-46
MsG0580025259.01	MsG0780035995.01	0.802374	5.781976e-49	2.827867e-46
MsG0580025315.01	MsG0780035995.01	0.820605	6.281185e-53	4.992619e-50
MsG0580026073.01	MsG0780035995.01	0.807342	5.296719e-50	2.942858e-47
MsG0380014988.01	MsG0780035995.01	0.842306	2.802589e-58	4.231890e-55
MsG0380015200.01	MsG0780035995.01	0.806653	7.409510e-50	4.043551e-47
MsG0380015201.01	MsG0780035995.01	0.819261	1.274150e-52	9.756747e-50
MsG0380015348.01	MsG0780035995.01	0.844798	6.048147e-59	9.876170e-56
MsG0380015654.01	MsG0780035995.01	0.839309	1.711715e-57	2.354470e-54
MsG0380015985.01	MsG0780035995.01	0.811185	7.942784e-51	4.883931e-48
MsG0380016089.01	MsG0780035995.01	0.803479	3.418580e-49	1.719743e-46
MsG0380016231.01	MsG0780035995.01	0.807053	6.099637e-50	3.363549e-47
MsG0380016492.01	MsG0780035995.01	0.808551	2.929742e-50	1.680119e-47
MsG0380016881.01	MsG0780035995.01	0.844345	8.007023e-59	1.288896e-55
MsG0380016889.01	MsG0780035995.01	0.815718	8.008363e-52	5.564152e-49
MsG0380017385.01	MsG0780035995.01	0.803611	3.209884e-49	1.620244e-46
MsG0380017405.01	MsG0780035995.01	0.829047	6.403144e-55	6.478056e-52
MsG0380017406.01	MsG0780035995.01	0.820589	6.333692e-53	5.032084e-50
MsG0380017812.01	MsG0780035995.01	0.836236	1.053368e-56	1.319646e-53
MsG0480018088.01	MsG0780035995.01	0.848459	6.046223e-60	1.110427e-56
MsG0480018201.01	MsG0780035995.01	0.817251	3.633932e-52	2.632807e-49
MsG0480018203.01	MsG0780035995.01	0.801979	6.974338e-49	3.376450e-46
MsG0580026362.01	MsG0780035995.01	0.802388	5.745257e-49	2.810885e-46
MsG0580029820.01	MsG0780035995.01	0.821314	4.311768e-53	3.495765e-50
MsG0680030399.01	MsG0780035995.01	0.816296	5.948225e-52	4.198778e-49
MsG0680030441.01	MsG0780035995.01	0.835192	1.935977e-56	2.350078e-53
MsG0680030644.01	MsG0780035995.01	0.869009	4.266137e-66	1.575822e-62
MsG0280006534.01	MsG0780035995.01	0.820065	8.350308e-53	6.539739e-50
MsG0280007600.01	MsG0780035995.01	0.819786	9.671608e-53	7.515620e-50
MsG0280007650.01	MsG0780035995.01	0.801998	6.910601e-49	3.347365e-46
MsG0280009079.01	MsG0780035995.01	0.804351	2.252529e-49	1.158806e-46
MsG0280009094.01	MsG0780035995.01	0.814524	1.474391e-51	9.916513e-49
MsG0280009742.01	MsG0780035995.01	0.814611	1.410751e-51	9.510365e-49
MsG0280009864.01	MsG0780035995.01	0.816090	6.613573e-52	4.642034e-49
MsG0280010055.01	MsG0780035995.01	-0.822937	1.813255e-53	1.539398e-50
MsG0280010227.01	MsG0780035995.01	0.825851	3.740417e-54	3.450017e-51
MsG0280010461.01	MsG0780035995.01	0.823623	1.253569e-53	1.085078e-50
MsG0780035995.01	MsG0780036002.01	0.893548	5.671040e-75	5.427518e-71
MsG0780035995.01	MsG0780036004.01	0.898920	3.305973e-77	3.992559e-73
MsG0780035995.01	MsG0780037458.01	0.846023	2.818187e-59	4.786437e-56
MsG0780035995.01	MsG0780038030.01	0.825449	4.658894e-54	4.247503e-51
MsG0780035995.01	MsG0780038047.01	0.817286	3.568809e-52	2.588074e-49
MsG0780035995.01	MsG0780038108.01	0.839138	1.895864e-57	2.593970e-54
MsG0780035995.01	MsG0780038197.01	0.814145	1.787819e-51	1.190125e-48
MsG0780035995.01	MsG0780038263.01	0.813610	2.346592e-51	1.539618e-48
MsG0780035995.01	MsG0780039836.01	0.836228	1.058082e-56	1.325278e-53
MsG0780035995.01	MsG0780039838.01	0.847255	1.298027e-59	2.293748e-56
MsG0780035995.01	MsG0780039839.01	0.831139	1.977526e-55	2.126949e-52
MsG0780035995.01	MsG0780040129.01	0.852955	3.286075e-61	6.984980e-58
MsG0780035995.01	MsG0780040321.01	0.814074	1.853858e-51	1.231736e-48
MsG0780035995.01	MsG0780040429.01	0.807709	4.426444e-50	2.482898e-47
MsG0780035995.01	MsG0780040622.01	0.807606	4.656185e-50	2.604672e-47
MsG0780035995.01	MsG0780040849.01	0.816116	6.526030e-52	4.583830e-49
MsG0780035995.01	MsG0780041121.01	0.842710	2.189500e-58	3.347921e-55
MsG0780035995.01	MsG0780041617.01	0.802245	6.147063e-49	2.996474e-46
MsG0780035995.01	MsG0780041618.01	0.831355	1.749728e-55	1.894084e-52
MsG0780035995.01	MsG0780041620.01	0.805441	1.332989e-49	7.052707e-47
MsG0780035995.01	MsG0780041691.01	0.815505	8.934549e-52	6.171449e-49
MsG0780035995.01	MsG0780041783.01	0.802204	6.268804e-49	3.052393e-46
MsG0780035995.01	MsG0880042291.01	0.863492	2.395103e-64	7.273779e-61
MsG0780035995.01	MsG0880042858.01	0.809399	1.929349e-50	1.131622e-47
MsG0780035995.01	MsG0880042895.01	0.821354	4.220902e-53	3.425928e-50
MsG0780035995.01	MsG0880043069.01	0.812889	3.377198e-51	2.172967e-48
MsG0780035995.01	MsG0880044727.01	0.800716	1.265072e-48	5.931946e-46
MsG0780035995.01	MsG0880044968.01	0.833249	5.942465e-56	6.805129e-53
MsG0780035995.01	MsG0880045273.01	0.846644	1.907635e-59	3.305718e-56
MsG0780035995.01	MsG0880045274.01	0.804117	2.519019e-49	1.288177e-46
MsG0780035995.01	MsG0880045321.01	0.824618	7.322047e-54	6.520140e-51
MsG0780035995.01	MsG0880045369.01	0.843982	1.002345e-58	1.595275e-55
MsG0780035995.01	MsG0880045385.01	0.834861	2.346188e-56	2.819741e-53
MsG0780035995.01	MsG0880045400.01	0.810882	9.239292e-51	5.636066e-48
MsG0780035995.01	MsG0880045755.01	0.851781	7.097616e-61	1.452354e-57
MsG0780035995.01	MsG0880046189.01	0.854488	1.190785e-61	2.663791e-58
MsG0780035995.01	MsG0880046219.01	0.807305	5.394577e-50	2.994407e-47
MsG0780035995.01	MsG0880046341.01	0.814236	1.707378e-51	1.139391e-48
MsG0780035995.01	MsG0880046469.01	0.811490	6.821249e-51	4.228324e-48
MsG0780035995.01	MsG0880046630.01	0.853491	2.308021e-61	4.995785e-58

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780035995.01.T02	MTR_7g006630	80.556	36	7	0	2	37	138	173	9.37e-16	65.9
MsG0780035995.01.T02	MTR_7g006690	77.778	36	8	0	2	37	143	178	2.83e-15	64.7
MsG0780035995.01.T02	MTR_6g033040	76.471	34	8	0	2	35	142	175	1.56e-12	57.8
MsG0780035995.01.T02	MTR_7g084970	72.727	33	9	0	1	33	141	173	1.15e-11	55.5
MsG0780035995.01.T01	MTR_7g006690	86.585	82	11	0	1	82	70	151	1.46e-50	157
MsG0780035995.01.T01	MTR_7g006630	84.146	82	13	0	1	82	65	146	5.77e-49	153
MsG0780035995.01.T01	MTR_6g033040	62.195	82	31	0	1	82	69	150	3.10e-35	119
MsG0780035995.01.T01	MTR_7g084970	57.647	85	36	0	1	85	69	153	4.85e-33	113
MsG0780035995.01.T01	MTR_0020s0120	59.259	81	33	0	1	81	68	148	1.97e-32	111
MsG0780035995.01.T01	MTR_7g085020	59.756	82	33	0	1	82	70	151	2.23e-32	111
MsG0780035995.01.T01	MTR_1g060190	58.228	79	31	1	1	77	69	147	1.15e-29	104
MsG0780035995.01.T01	MTR_7g085040	52.941	85	40	0	1	85	66	150	7.25e-29	102
MsG0780035995.01.T01	MTR_7g104460	56.250	80	34	1	1	79	69	148	1.29e-27	99.8
MsG0780035995.01.T01	MTR_0020s0120	55.556	81	29	1	1	81	68	141	3.59e-27	98.2
MsG0780035995.01.T01	MTR_2g086270	48.780	82	41	1	1	81	68	149	7.78e-25	92.4
MsG0780035995.01.T01	MTR_8g106840	47.436	78	40	1	1	77	68	145	4.43e-18	75.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780035995.01.T02	AT1G65480	73.529	34	9	0	2	35	186	219	7.96e-14	61.6
MsG0780035995.01.T02	AT1G65480	73.529	34	9	0	2	35	142	175	9.70e-14	60.8
MsG0780035995.01.T02	AT4G20370	73.529	34	9	0	1	34	141	174	2.50e-13	59.7
MsG0780035995.01.T01	AT1G65480	65.432	81	28	0	1	81	69	149	1.42e-35	119
MsG0780035995.01.T01	AT1G65480	65.432	81	28	0	1	81	113	193	4.02e-35	120
MsG0780035995.01.T01	AT4G20370	58.025	81	34	0	1	81	69	149	2.91e-31	108
MsG0780035995.01.T01	AT5G62040	54.217	83	37	1	1	82	69	151	5.19e-28	100
MsG0780035995.01.T01	AT5G03840	52.041	98	40	4	1	96	72	164	1.43e-26	97.1
MsG0780035995.01.T01	AT2G27550	50.000	80	39	1	1	79	70	149	7.05e-25	92.8
MsG0780035995.01.T01	AT1G18100	51.899	79	36	1	1	77	67	145	3.03e-22	85.9

Find 30 sgRNAs with CRISPR-Local

Find 93 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTTGCAGAAGTTTACAATCT+TGG	0.279344	7:-1070248	MsG0780035995.01.T01:CDS
TGAATCCCTCTTGTTGGTCT+TGG	0.316500	7:+1070355	None:intergenic
CCCTGTAGTCGCTGGAATAT+TGG	0.340527	7:+1070725	None:intergenic
TCAGTAGGGCTTGGTGCATC+AGG	0.356176	7:+1072298	None:intergenic
TACAGGTATTCCCTCATATT+AGG	0.366238	7:+1072274	None:intergenic
TTGTGGTTATAATTATTAGA+TGG	0.404057	7:+1070160	None:intergenic
TGTTGTTTAAGCAACCTTGT+AGG	0.415361	7:-1070318	MsG0780035995.01.T01:CDS
GCCCTACTGATCCTAATATG+AGG	0.445100	7:-1072285	MsG0780035995.01.T01:CDS
TGTCAACGAGAAAGTGGTTC+CGG	0.448740	7:-1070197	MsG0780035995.01.T01:CDS
ACCAATATTCCAGCGACTAC+AGG	0.450659	7:-1070726	MsG0780035995.01.T01:CDS
ATATGAGGGAATACCTGTAT+TGG	0.453295	7:-1072270	MsG0780035995.01.T01:intron
ACACGATGAATCCCTCTTGT+TGG	0.458184	7:+1070349	None:intergenic
TTCAATTGTCAACGAGAAAG+TGG	0.476637	7:-1070203	MsG0780035995.01.T01:CDS
TTGAAATAGAGAGCAGCAAC+AGG	0.483630	7:+1070221	None:intergenic
AAATTCAAACTTACCAATAC+AGG	0.502537	7:+1072257	None:intergenic
GCGACTACAGGGACAACATT+CGG	0.503478	7:-1070714	MsG0780035995.01.T01:intron
AATGTTGTCCCTGTAGTCGC+TGG	0.506880	7:+1070717	None:intergenic
ATATTAGGATCAGTAGGGCT+TGG	0.509781	7:+1072289	None:intergenic
GCTAATATAGTGTGCCTACA+AGG	0.535198	7:+1070304	None:intergenic
GATGGTTAGCCTCCTTCCAC+CGG	0.542124	7:+1070178	None:intergenic
GAGAAAGTGGTTCCGGTGGA+AGG	0.542228	7:-1070190	MsG0780035995.01.T01:CDS
CAGTAGGGCTTGGTGCATCA+GGG	0.543914	7:+1072299	None:intergenic
CCCTCATATTAGGATCAGTA+GGG	0.548872	7:+1072284	None:intergenic
CCCTACTGATCCTAATATGA+GGG	0.564661	7:-1072284	MsG0780035995.01.T01:CDS
GAAAATCCAAGACCAACAAG+AGG	0.566107	7:-1070361	MsG0780035995.01.T01:CDS
TCCCTCATATTAGGATCAGT+AGG	0.580960	7:+1072283	None:intergenic
CCAATATTCCAGCGACTACA+GGG	0.601358	7:-1070725	MsG0780035995.01.T01:CDS
AAAATCCAAGACCAACAAGA+GGG	0.616950	7:-1070360	MsG0780035995.01.T01:CDS
CAACGAGAAAGTGGTTCCGG+TGG	0.628002	7:-1070194	MsG0780035995.01.T01:CDS
AAAGTGGTTCCGGTGGAAGG+AGG	0.632372	7:-1070187	MsG0780035995.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATTCCAAAAATATTATAAAT+TGG	+	Chr7:1070800-1070819	None:intergenic	10.0%
!!	TGTATAAATATTCAAAAAAA+TGG	+	Chr7:1070840-1070859	None:intergenic	10.0%
!!	TTATTTATTAAAGATCTATT+TGG	+	Chr7:1070636-1070655	None:intergenic	10.0%
!!!	ATACATTTTTATATATAACA+AGG	-	Chr7:1071886-1071905	MsG0780035995.01.T01:intron	10.0%
!!!	ATTTTTTTAATAATTTAGCA+TGG	-	Chr7:1070996-1071015	MsG0780035995.01.T01:intron	10.0%
!!!	TAATATTTTTGGAATTTATA+AGG	-	Chr7:1070805-1070824	MsG0780035995.01.T01:intron	10.0%
!!!	TACATTTTTATATATAACAA+GGG	-	Chr7:1071887-1071906	MsG0780035995.01.T01:intron	10.0%
!!!	TCATATTTTTTATTTTGTTT+CGG	-	Chr7:1070291-1070310	MsG0780035995.01.T01:CDS	10.0%
!!	CAAAATAAAAAATATGATTG+TGG	+	Chr7:1070288-1070307	None:intergenic	15.0%
!!	TGATAAATATTATTATGTCT+TGG	-	Chr7:1070323-1070342	MsG0780035995.01.T01:CDS	15.0%
!!!	AAAAAAAAAGTGTTGTATTT+AGG	-	Chr7:1071458-1071477	MsG0780035995.01.T01:intron	15.0%
!!!	CAACCAATTTATAATATTTT+TGG	-	Chr7:1070794-1070813	MsG0780035995.01.T01:intron	15.0%
!!!	TATATTTTTCATGAATTCAA+AGG	+	Chr7:1071150-1071169	None:intergenic	15.0%
!!	ATCAAAATAAAGATAAACAG+TGG	+	Chr7:1071301-1071320	None:intergenic	20.0%
!!	GAAAAATATAACTTCAATTG+TGG	-	Chr7:1071160-1071179	MsG0780035995.01.T01:intron	20.0%
!!	TAGTGTAAGAACAAAAATTT+GGG	+	Chr7:1070888-1070907	None:intergenic	20.0%
!!	TATTCAAAAAAATGGTAAGT+TGG	+	Chr7:1070832-1070851	None:intergenic	20.0%
!!	TATTTAGGTCAGAAAATAAT+TGG	-	Chr7:1071473-1071492	MsG0780035995.01.T01:intron	20.0%
!!	TCAAAATAAAGATAAACAGT+GGG	+	Chr7:1071300-1071319	None:intergenic	20.0%
!!	TTAGTGTAAGAACAAAAATT+TGG	+	Chr7:1070889-1070908	None:intergenic	20.0%
!!!	GTTTATCTTTATTTTGATGA+TGG	-	Chr7:1071303-1071322	MsG0780035995.01.T01:intron	20.0%
!	AAAAATAAGCCAAACAAAAG+AGG	+	Chr7:1070445-1070464	None:intergenic	25.0%
!	AAATTCAAACTTACCAATAC+AGG	+	Chr7:1070228-1070247	None:intergenic	25.0%
!	AATACACAACTTATGATTTG+CGG	-	Chr7:1070961-1070980	MsG0780035995.01.T01:intron	25.0%
!	ATAGTTCATTCTTTGCAATT+TGG	-	Chr7:1071250-1071269	MsG0780035995.01.T01:intron	25.0%
!	ATGCATTTGAACAATGTTTA+TGG	-	Chr7:1071353-1071372	MsG0780035995.01.T01:intron	25.0%
!!	TTTTTATATATAACAAGGGC+CGG	-	Chr7:1071891-1071910	MsG0780035995.01.T01:intron	25.0%
!!	TTTTTGATAAGTCAATTCAC+TGG	+	Chr7:1070940-1070959	None:intergenic	25.0%
!!!	CACGTTGTTTTATTAATTGT+AGG	-	Chr7:1072079-1072098	MsG0780035995.01.T01:intron	25.0%
!!!	TAATTTTAAGAGTGCGTTTT+AGG	-	Chr7:1070419-1070438	MsG0780035995.01.T01:intron	25.0%
	ACCATTTCCCTCTTTATTAT+TGG	-	Chr7:1071714-1071733	MsG0780035995.01.T01:intron	30.0%
	ATAGCGATCCAATAATAAAG+AGG	+	Chr7:1071725-1071744	None:intergenic	30.0%
	CTATAGGACTTAAATTTGGT+TGG	+	Chr7:1070913-1070932	None:intergenic	30.0%
	TAGCGATCCAATAATAAAGA+GGG	+	Chr7:1071724-1071743	None:intergenic	30.0%
	TCCAATAATAAAGAGGGAAA+TGG	+	Chr7:1071718-1071737	None:intergenic	30.0%
	TTATTATTGGATCGCTATAC+AGG	-	Chr7:1071727-1071746	MsG0780035995.01.T01:intron	30.0%
	TTTGCAGAAGTTTACAATCT+TGG	-	Chr7:1072234-1072253	MsG0780035995.01.T01:intron	30.0%
!	ATAAAATTTTGTCTCGATCG+AGG	+	Chr7:1072205-1072224	None:intergenic	30.0%
!	ATACACAACTTATGATTTGC+GGG	-	Chr7:1070962-1070981	MsG0780035995.01.T01:intron	30.0%
!	TGGCTAGAATTCACATTTTA+AGG	+	Chr7:1071946-1071965	None:intergenic	30.0%
!!!	TTTTTTGTCAAGTAGTCTAG+TGG	+	Chr7:1071966-1071985	None:intergenic	30.0%
	AAAATCCAAGACCAACAAGA+GGG	-	Chr7:1072122-1072141	MsG0780035995.01.T01:intron	35.0%
	ATATGAGGGAATACCTGTAT+TGG	-	Chr7:1070212-1070231	MsG0780035995.01.T01:CDS	35.0%
	CTTTATTCTATTCGCTCACA+AGG	+	Chr7:1071400-1071419	None:intergenic	35.0%
	GAGGGAAATGGTAATTAGAA+TGG	+	Chr7:1071706-1071725	None:intergenic	35.0%
	GGATAAACAATAGAACCAAG+TGG	-	Chr7:1071181-1071200	MsG0780035995.01.T01:intron	35.0%
	GTGATGTGATAGACAAAACA+AGG	-	Chr7:1071572-1071591	MsG0780035995.01.T01:intron	35.0%
	TACAGGTATTCCCTCATATT+AGG	+	Chr7:1070211-1070230	None:intergenic	35.0%
	TTCAATTGTCAACGAGAAAG+TGG	-	Chr7:1072279-1072298	MsG0780035995.01.T01:CDS	35.0%
	TTGATAAGTCAATTCACTGG+CGG	+	Chr7:1070937-1070956	None:intergenic	35.0%
!	TCACTCATGTTTGTTGAACT+TGG	+	Chr7:1071102-1071121	None:intergenic	35.0%
!	TGTTGTTTAAGCAACCTTGT+AGG	-	Chr7:1072164-1072183	MsG0780035995.01.T01:intron	35.0%
!!	CTTGGTATTGTTTTGTTCAG+TGG	-	Chr7:1070341-1070360	MsG0780035995.01.T01:CDS	35.0%
!!!	CACATTTTAAGGTGAGTAAG+TGG	+	Chr7:1071935-1071954	None:intergenic	35.0%
	ATATTAGGATCAGTAGGGCT+TGG	+	Chr7:1070196-1070215	None:intergenic	40.0%
	CCCTACTGATCCTAATATGA+GGG	-	Chr7:1070198-1070217	MsG0780035995.01.T01:CDS	40.0%
	CCCTCATATTAGGATCAGTA+GGG	+	Chr7:1070201-1070220	None:intergenic	40.0%
	CGGGCTATAGGACTTAAATT+TGG	+	Chr7:1070917-1070936	None:intergenic	40.0%
	GAAAATCCAAGACCAACAAG+AGG	-	Chr7:1072121-1072140	MsG0780035995.01.T01:intron	40.0%
	GCTAATATAGTGTGCCTACA+AGG	+	Chr7:1072181-1072200	None:intergenic	40.0%
	GTCTCTGAGTATAGATCAGT+TGG	-	Chr7:1071855-1071874	MsG0780035995.01.T01:intron	40.0%
	TATTGGATCGCTATACAGGA+TGG	-	Chr7:1071731-1071750	MsG0780035995.01.T01:intron	40.0%
	TCCCTCATATTAGGATCAGT+AGG	+	Chr7:1070202-1070221	None:intergenic	40.0%
	TGATAAGTCAATTCACTGGC+GGG	+	Chr7:1070936-1070955	None:intergenic	40.0%
	TTGAAATAGAGAGCAGCAAC+AGG	+	Chr7:1072264-1072283	None:intergenic	40.0%
!!	CGTTTTAGGCCTCTTTTGTT+TGG	-	Chr7:1070433-1070452	MsG0780035995.01.T01:intron	40.0%
	AAGGTGAGTAAGTGGAGTGT+CGG	+	Chr7:1071927-1071946	None:intergenic	45.0%
	ACACGATGAATCCCTCTTGT+TGG	+	Chr7:1072136-1072155	None:intergenic	45.0%
	ACCAATATTCCAGCGACTAC+AGG	-	Chr7:1071756-1071775	MsG0780035995.01.T01:intron	45.0%
	ACTTGGTCACATCTTGTGCA+TGG	+	Chr7:1071085-1071104	None:intergenic	45.0%
	CACAGACACAAGAAACCACT+TGG	+	Chr7:1071199-1071218	None:intergenic	45.0%
	CCAATATTCCAGCGACTACA+GGG	-	Chr7:1071757-1071776	MsG0780035995.01.T01:intron	45.0%
	GCCCTACTGATCCTAATATG+AGG	-	Chr7:1070197-1070216	MsG0780035995.01.T01:CDS	45.0%
	TGTCAACGAGAAAGTGGTTC+CGG	-	Chr7:1072285-1072304	MsG0780035995.01.T01:CDS	45.0%
!	ATTCGCTCACAAGGTGTCTA+CGG	+	Chr7:1071391-1071410	None:intergenic	45.0%
!	TGAATCCCTCTTGTTGGTCT+TGG	+	Chr7:1072130-1072149	None:intergenic	45.0%
!!	TTTCTATATAATTAAAAAAA+TGG	-	Chr7:1070711-1070730	MsG0780035995.01.T01:intron	5.0%
	AATGTTGTCCCTGTAGTCGC+TGG	+	Chr7:1071768-1071787	None:intergenic	50.0%
	CCCTGTAGTCGCTGGAATAT+TGG	+	Chr7:1071760-1071779	None:intergenic	50.0%
	GCGACTACAGGGACAACATT+CGG	-	Chr7:1071768-1071787	MsG0780035995.01.T01:intron	50.0%
!	AGGTGAGTAAGTGGAGTGTC+GGG	+	Chr7:1071926-1071945	None:intergenic	50.0%
!	TTCGCTCACAAGGTGTCTAC+GGG	+	Chr7:1071390-1071409	None:intergenic	50.0%
!!	TCAATTCACTGGCGGGCTAT+AGG	+	Chr7:1070929-1070948	None:intergenic	50.0%
	AAAGTGGTTCCGGTGGAAGG+AGG	-	Chr7:1072295-1072314	MsG0780035995.01.T01:CDS	55.0%
	CAACGAGAAAGTGGTTCCGG+TGG	-	Chr7:1072288-1072307	MsG0780035995.01.T01:CDS	55.0%
	GAGAAAGTGGTTCCGGTGGA+AGG	-	Chr7:1072292-1072311	MsG0780035995.01.T01:CDS	55.0%
!	CAAGGTGTCTACGGGATGGA+TGG	+	Chr7:1071382-1071401	None:intergenic	55.0%
!	CTCACAAGGTGTCTACGGGA+TGG	+	Chr7:1071386-1071405	None:intergenic	55.0%
!!	CAGTAGGGCTTGGTGCATCA+GGG	+	Chr7:1070186-1070205	None:intergenic	55.0%
!!	GATGGTTAGCCTCCTTCCAC+CGG	+	Chr7:1072307-1072326	None:intergenic	55.0%
!!	GGTGAGTAAGTGGAGTGTCG+GGG	+	Chr7:1071925-1071944	None:intergenic	55.0%
!!	TCAGTAGGGCTTGGTGCATC+AGG	+	Chr7:1070187-1070206	None:intergenic	55.0%
!!	GAGTGTCGGGGTTCGAACAC+CGG	+	Chr7:1071913-1071932	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
Chr7	gene	1070175	1072329	1070175	ID=MsG0780035995.01;Name=MsG0780035995.01
Chr7	mRNA	1070183	1072329	1070183	ID=MsG0780035995.01.T01;Parent=MsG0780035995.01;Name=MsG0780035995.01.T01;_AED=0.50;_eAED=0.50;_QI=0\|0\|0\|1\|0\|0\|3\|0\|106
Chr7	exon	1070183	1070403	1070183	ID=MsG0780035995.01.T01:exon:2233;Parent=MsG0780035995.01.T01
Chr7	exon	1070715	1070755	1070715	ID=MsG0780035995.01.T01:exon:2232;Parent=MsG0780035995.01.T01
Chr7	exon	1072271	1072329	1072271	ID=MsG0780035995.01.T01:exon:2231;Parent=MsG0780035995.01.T01
Chr7	CDS	1072271	1072329	1072271	ID=MsG0780035995.01.T01:cds;Parent=MsG0780035995.01.T01
Chr7	CDS	1070715	1070755	1070715	ID=MsG0780035995.01.T01:cds;Parent=MsG0780035995.01.T01
Chr7	CDS	1070183	1070403	1070183	ID=MsG0780035995.01.T01:cds;Parent=MsG0780035995.01.T01
Chr7	mRNA	1070175	1070288	1070175	ID=MsG0780035995.01.T02;Parent=MsG0780035995.01;Name=MsG0780035995.01.T02;_AED=0.50;_eAED=0.50;_QI=0\|-1\|0\|1\|-1\|0\|1\|0\|37
Chr7	exon	1070175	1070288	1070175	ID=MsG0780035995.01.T02:exon:2234;Parent=MsG0780035995.01.T02
Chr7	CDS	1070175	1070288	1070175	ID=MsG0780035995.01.T02:cds;Parent=MsG0780035995.01.T02
Chr7	mRNA	1070347	1070385	1070347	ID=MsG0780035995.01.T03;Parent=MsG0780035995.01;Name=MsG0780035995.01.T03;_AED=0.50;_eAED=0.50;_QI=0\|-1\|0\|1\|-1\|0\|1\|0\|12
Chr7	exon	1070347	1070385	1070347	ID=MsG0780035995.01.T03:exon:2235;Parent=MsG0780035995.01.T03
Chr7	CDS	1070347	1070385	1070347	ID=MsG0780035995.01.T03:cds;Parent=MsG0780035995.01.T03

Gene Sequence

>MsG0780035995.01.T03

ATGAAAATCCAAGACCAACAAGAGGGATTCATCGTGTGA

>MsG0780035995.01.T02

AAATTTTATTACAAGAGATTTGCAGAAGTTTACAATCTTGGATTACCTGTTGCTGCTCTCTATTTCAATTGTCAACGAGAAAGTGGTTCCGGTGGAAGGAGGCTAACCATCTAA

>MsG0780035995.01.T01

ATGGTGAACCCTGATGCACCAAGCCCTACTGATCCTAATATGAGGGAATACCTGTATTGGATGGTTACCAATATTCCAGCGACTACAGGGACAACATTCGGACAAGAGATAGTGAGCTATGAAAATCCAAGACCAACAAGAGGGATTCATCGTGTGATATTTGTGTTGTTTAAGCAACCTTGTAGGCACACTATATTAGCTCCTCGATCGAGACAAAATTTTATTACAAGAGATTTGCAGAAGTTTACAATCTTGGATTACCTGTTGCTGCTCTCTATTTCAATTGTCAACGAGAAAGTGGTTCCGGTGGAAGGAGGCTAA

Protein sequence

>MsG0780035995.01.T03

MKIQDQQEGFIV*

>MsG0780035995.01.T02

KFYYKRFAEVYNLGLPVAALYFNCQRESGSGGRRLTI*

>MsG0780035995.01.T01

MVNPDAPSPTDPNMREYLYWMVTNIPATTGTTFGQEIVSYENPRPTRGIHRVIFVLFKQPCRHTILAPRSRQNFITRDLQKFTILDYLLLLSISIVNEKVVPVEGG*