AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680030399.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680030399.01.T01 MTR_6g005480 72.727 209 17 2 1 169 210 418 2.03e-83 252
MsG0680030399.01.T01 MTR_4g105630 60.804 199 41 2 1 162 182 380 6.57e-71 219
MsG0680030399.01.T01 MTR_3g077640 60.099 203 44 3 1 166 207 409 1.69e-63 201
MsG0680030399.01.T01 MTR_4g105630 57.143 189 44 2 1 152 182 370 7.03e-60 190
MsG0680030399.01.T01 MTR_4g105630 55.738 122 40 1 1 108 182 303 7.93e-35 124
MsG0680030399.01.T01 MTR_4g105630 58.929 112 32 1 1 98 182 293 4.55e-33 120
MsG0680030399.01.T01 MTR_3g049400 37.000 200 78 5 2 159 208 401 8.25e-25 99.0
MsG0680030399.01.T01 MTR_2g022700 36.500 200 79 4 2 159 202 395 8.29e-25 99.0
MsG0680030399.01.T01 MTR_2g029180 38.860 193 79 4 2 156 201 392 1.04e-23 96.3
MsG0680030399.01.T01 MTR_4g088350 33.503 197 88 5 1 158 85 277 5.07e-22 90.1
MsG0680030399.01.T01 MTR_4g088350 33.503 197 88 5 1 158 196 388 2.82e-21 89.4
MsG0680030399.01.T01 MTR_5g044220 31.731 208 99 5 1 169 201 404 3.31e-18 80.9
MsG0680030399.01.T01 MTR_4g131800 32.432 222 79 4 2 158 199 414 1.21e-15 73.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680030399.01.T01 AT5G33320 57.143 203 50 3 1 166 205 407 2.38e-58 187
MsG0680030399.01.T01 AT3G01550 56.522 207 47 5 1 165 176 381 1.81e-53 174
MsG0680030399.01.T01 AT3G01550 56.436 202 50 4 1 165 176 376 1.39e-51 169
MsG0680030399.01.T01 AT5G17630 37.879 198 84 3 2 161 210 406 2.25e-29 111
MsG0680030399.01.T01 AT5G54800 38.806 201 71 5 2 158 195 387 1.14e-25 101
MsG0680030399.01.T01 AT1G61800 35.000 200 82 4 2 159 195 388 1.41e-23 95.5
MsG0680030399.01.T01 AT1G61800 34.000 200 84 4 2 159 195 388 4.44e-22 91.7
MsG0680030399.01.T01 AT5G46110 31.980 197 91 5 1 158 92 284 4.07e-21 87.8
MsG0680030399.01.T01 AT5G46110 31.959 194 89 5 1 155 205 394 8.21e-21 88.2
MsG0680030399.01.T01 AT5G46110 31.980 197 91 5 1 158 205 397 8.87e-21 88.2
MsG0680030399.01.T01 AT5G46110 31.148 183 94 5 1 155 205 383 2.09e-16 75.9

Find 74 sgRNAs with CRISPR-Local

Find 529 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTACTTACCCGTTTCCTTCT+TGG 0.153484 6:-1681277 None:intergenic
GTTAATAAGATATTAAAATT+TGG 0.201774 6:+1689638 MsG0680030399.01.T01:three_prime_UTR
TGTTCTTTCATCCCTTCTTT+TGG 0.207239 6:+1686150 MsG0680030399.01.T01:CDS
AATTATGCTTCCTTTGTCTT+TGG 0.270898 6:-1689410 None:intergenic
CCACTTAGACTCACCATTGA+TGG 0.288106 6:+1679545 MsG0680030399.01.T01:five_prime_UTR
CTCTTAGGTAAGATTGATTC+TGG 0.289279 6:+1687230 MsG0680030399.01.T01:intron
AGGTTTGATGAGAGAAAATA+AGG 0.305575 6:-1679404 None:intergenic
GATGAAGGGAAACAAACTTC+TGG 0.305694 6:+1679692 MsG0680030399.01.T01:five_prime_UTR
TTGGTTTCATGTTTGCTACT+TGG 0.322424 6:+1679735 MsG0680030399.01.T01:five_prime_UTR
CACTCACACCATCAAATCTA+TGG 0.327426 6:+1686111 MsG0680030399.01.T01:exon
GTGAAGACTTTCTAACAGTT+TGG 0.333466 6:-1679595 None:intergenic
AGGGGTTGGATCTCAATATT+AGG 0.362327 6:+1689548 MsG0680030399.01.T01:three_prime_UTR
GCTTCCTTTGTCTTTGGCAC+TGG 0.363988 6:-1689404 None:intergenic
ATTTGGTGGCAGGTTTCATA+TGG 0.368164 6:+1688994 MsG0680030399.01.T01:intron
ACTTGCCGTGGCTCATACAT+TGG 0.369426 6:+1686042 MsG0680030399.01.T01:five_prime_UTR
CCTTCATCACTCTGTGCCTC+AGG 0.380559 6:-1679677 None:intergenic
TGACAGGTGAGACAGGAGTT+TGG 0.392266 6:-1689104 None:intergenic
CTTCAACATTTACAACAAAC+AGG 0.393424 6:+1679775 MsG0680030399.01.T01:five_prime_UTR
GAAAGGTTCCATAGATTTGA+TGG 0.395306 6:-1686119 None:intergenic
TTAACTCTTTCAAAAGAGTA+AGG 0.418575 6:+1689431 MsG0680030399.01.T01:three_prime_UTR
CTTGCCGTGGCTCATACATT+GGG 0.418644 6:+1686043 MsG0680030399.01.T01:five_prime_UTR
CTTGTTCAGTCTCTTCAGCT+TGG 0.421995 6:+1679716 MsG0680030399.01.T01:five_prime_UTR
TTTGGATTTGAAATAAAGAA+AGG 0.431139 6:-1679617 None:intergenic
ACATGTTCTCGTCTCCAAAC+AGG 0.432344 6:+1687259 MsG0680030399.01.T01:CDS
AATTACATACCGCAGATTGC+AGG 0.448472 6:-1687555 None:intergenic
GGAACTGCTATTGCACTTGT+TGG 0.456119 6:+1689347 MsG0680030399.01.T01:intron
TTCTCGTCTCCAAACAGGAT+TGG 0.463180 6:+1687264 MsG0680030399.01.T01:CDS
GTCTCACCTGTCAATGCCCT+TGG 0.465418 6:+1689114 MsG0680030399.01.T01:CDS
ATGAAGGGAAACAAACTTCT+GGG 0.466497 6:+1679693 MsG0680030399.01.T01:five_prime_UTR
CCTGAGGCACAGAGTGATGA+AGG 0.470545 6:+1679677 MsG0680030399.01.T01:five_prime_UTR
ATGTTTCTGACAGGAAGCTT+TGG 0.475357 6:+1687435 MsG0680030399.01.T01:intron
TGCAAAACCAAGAAGGAAAC+GGG 0.475725 6:+1681270 MsG0680030399.01.T01:five_prime_UTR
GTGCTGAATCCAATCCTGTT+TGG 0.476483 6:-1687273 None:intergenic
TGCTGCTTCTTCTGTTCCTG+AGG 0.480346 6:+1679661 MsG0680030399.01.T01:five_prime_UTR
ATATAGCATATGGTACCAAC+AGG 0.484432 6:-1687501 None:intergenic
CCCTCCGAAAATATAGCATA+TGG 0.496477 6:-1687511 None:intergenic
CCGTGATTGATTCGTAAGGT+TGG 0.501913 6:-1687307 None:intergenic
AAAGAGAGAGAGATAGAGAG+AGG 0.505465 6:+1689455 MsG0680030399.01.T01:three_prime_UTR
CTGCAAAACCAAGAAGGAAA+CGG 0.508047 6:+1681269 MsG0680030399.01.T01:five_prime_UTR
GTTTGGTTATGTGGGTTGAA+AGG 0.513028 6:-1679472 None:intergenic
GACTTACCAAGGGCATTGAC+AGG 0.516195 6:-1689120 None:intergenic
AGGTGTAAGGTTGAAGAAGA+AGG 0.521775 6:-1679452 None:intergenic
ACATTACCTCACCCAAAAGA+AGG 0.524079 6:-1686162 None:intergenic
AGGGCATTGACAGGTGAGAC+AGG 0.524854 6:-1689111 None:intergenic
TTTGGTGGCAGGTTTCATAT+GGG 0.526674 6:+1688995 MsG0680030399.01.T01:intron
CATAGAGATTATGCATGTTG+AGG 0.527396 6:-1679424 None:intergenic
TTTCCGACTGAGTGTGTCAC+AGG 0.527740 6:-1689036 None:intergenic
TATGTGGGTTGAAAGGTGTA+AGG 0.528092 6:-1679465 None:intergenic
AATGTATGAGCCACGGCAAG+TGG 0.534798 6:-1686040 None:intergenic
GTTTGGAAGAAAGAAGAAGA+TGG 0.535689 6:-1679578 None:intergenic
CATTCCGTGATTGATTCGTA+AGG 0.539431 6:-1687311 None:intergenic
GAAAGAACAACAGTGAAGAA+AGG 0.544323 6:-1686136 None:intergenic
CCATCAATGGTGAGTCTAAG+TGG 0.550995 6:-1679545 None:intergenic
AAGAGAGAGAGATAGAGAGA+GGG 0.555665 6:+1689456 MsG0680030399.01.T01:three_prime_UTR
GATTGGATTCAGCACTGCAA+TGG 0.559860 6:+1687281 MsG0680030399.01.T01:CDS
GACGAACATTAGTCTTGGCA+AGG 0.560588 6:+1686075 MsG0680030399.01.T01:five_prime_UTR
TATGAGCCACGGCAAGTGGA+AGG 0.564903 6:-1686036 None:intergenic
TGGGCATGAAAATCCATCAA+TGG 0.566301 6:-1679558 None:intergenic
GTTGCCAACATTTGATCATG+CGG 0.578207 6:-1689592 None:intergenic
TTTGGAAGAAAGAAGAAGAT+GGG 0.579779 6:-1679577 None:intergenic
CATTACCTCACCCAAAAGAA+GGG 0.591595 6:-1686161 None:intergenic
TCTTGTATTCAAGGGCAAAG+AGG 0.597986 6:+1689375 MsG0680030399.01.T01:CDS
AGCAATCCTTCCACTTGCCG+TGG 0.598900 6:+1686030 MsG0680030399.01.T01:five_prime_UTR
ACAACTCTGCAAAACCAAGA+AGG 0.599138 6:+1681263 MsG0680030399.01.T01:five_prime_UTR
TAAGCCAGTGCCAAAGACAA+AGG 0.620413 6:+1689400 MsG0680030399.01.T01:CDS
GTTACCGCATGATCAAATGT+TGG 0.634623 6:+1689588 MsG0680030399.01.T01:three_prime_UTR
ATTCCCCAATGTATGAGCCA+CGG 0.635689 6:-1686047 None:intergenic
AAAACTAATGGCTAACGAAG+AGG 0.644953 6:+1687344 MsG0680030399.01.T01:CDS
ACCGCAGATTGCAGGTACGA+AGG 0.647636 6:-1687547 None:intergenic
TCACCTGTGACACACTCAGT+CGG 0.658587 6:+1689033 MsG0680030399.01.T01:CDS
TCCTTCGTACCTGCAATCTG+CGG 0.661719 6:+1687546 MsG0680030399.01.T01:CDS
CCAACCTTACGAATCAATCA+CGG 0.673670 6:+1687307 MsG0680030399.01.T01:CDS
TTGCCGTGGCTCATACATTG+GGG 0.675815 6:+1686044 MsG0680030399.01.T01:five_prime_UTR
CTGAGGCACAGAGTGATGAA+GGG 0.684073 6:+1679678 MsG0680030399.01.T01:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATTGTAAAATTATGTT+AGG - Chr6:1682106-1682125 None:intergenic 10.0%
!! AATTAAATATGTAAAATAAC+GGG + Chr6:1684224-1684243 MsG0680030399.01.T01:intron 10.0%
!! AGTAATAAAATAATTAAAAG+TGG - Chr6:1680945-1680964 None:intergenic 10.0%
!! ATAATAATGTATATATTGAT+CGG - Chr6:1685613-1685632 None:intergenic 10.0%
!! ATATATTAATAAAGTATATG+TGG + Chr6:1685167-1685186 MsG0680030399.01.T01:intron 10.0%
!! ATATATTCAAAAAATATAAG+TGG + Chr6:1684699-1684718 MsG0680030399.01.T01:intron 10.0%
!! CTATATAATATAATTAGATA+TGG - Chr6:1680818-1680837 None:intergenic 10.0%
!! GAATTAAATATGTAAAATAA+CGG + Chr6:1684223-1684242 MsG0680030399.01.T01:intron 10.0%
!! GTTAATAAGATATTAAAATT+TGG + Chr6:1689638-1689657 MsG0680030399.01.T01:three_prime_UTR 10.0%
!! TATATTAATAAAGTATATGT+GGG + Chr6:1685168-1685187 MsG0680030399.01.T01:intron 10.0%
!! TATATTCAAAAAATATAAGT+GGG + Chr6:1684700-1684719 MsG0680030399.01.T01:intron 10.0%
!! TGAATATATTAATAAAACTT+AGG - Chr6:1684688-1684707 None:intergenic 10.0%
!! TTAATATATTAATAAAACTC+AGG - Chr6:1685156-1685175 None:intergenic 10.0%
!! TTATAATTTCAATACATTTA+GGG + Chr6:1686541-1686560 MsG0680030399.01.T01:intron 10.0%
!! TTTATAATTTCAATACATTT+AGG + Chr6:1686540-1686559 MsG0680030399.01.T01:intron 10.0%
!!! AATATATACACATTTTTTTT+TGG - Chr6:1683633-1683652 None:intergenic 10.0%
!!! ACAGAAATTTTATTTTTATT+TGG - Chr6:1681769-1681788 None:intergenic 10.0%
!!! TTTATTTTATTTTTTAGTGT+AGG - Chr6:1682550-1682569 None:intergenic 10.0%
!! AAAATAAAAAAATTGATGAG+TGG - Chr6:1689510-1689529 None:intergenic 15.0%
!! AATATTATCGTAAAATTTCA+CGG + Chr6:1685435-1685454 MsG0680030399.01.T01:intron 15.0%
!! AATGAAAAGAAATAATAGAA+TGG + Chr6:1682972-1682991 MsG0680030399.01.T01:intron 15.0%
!! ATAAAATTTCTGTTAATTCA+AGG + Chr6:1681776-1681795 MsG0680030399.01.T01:intron 15.0%
!! GAAAATTAAAAGAAGAAATA+TGG - Chr6:1689238-1689257 None:intergenic 15.0%
!! TATAAAGTTATTCATTTGAT+TGG + Chr6:1680039-1680058 MsG0680030399.01.T01:intron 15.0%
!!! ATGAAGTTTTTTTTTTTCTT+TGG + Chr6:1682773-1682792 MsG0680030399.01.T01:intron 15.0%
!!! ATGAATTTTATTTGCATAAA+AGG + Chr6:1682853-1682872 MsG0680030399.01.T01:intron 15.0%
!!! TAAAAAGCATTTACTATAAT+CGG - Chr6:1688227-1688246 None:intergenic 15.0%
!!! TATCCTTATTTAAATAATTG+AGG + Chr6:1687803-1687822 MsG0680030399.01.T01:intron 15.0%
!!! TCAATATATGTCAAAAATTT+TGG + Chr6:1681041-1681060 MsG0680030399.01.T01:intron 15.0%
!!! TTTAAAATGAAACATTTTTC+TGG + Chr6:1688336-1688355 MsG0680030399.01.T01:intron 15.0%
!!! TTTCTTGTTGAAAATATTTT+TGG - Chr6:1681621-1681640 None:intergenic 15.0%
!! AAGTAAGTTACTATTACTAA+AGG - Chr6:1688931-1688950 None:intergenic 20.0%
!! AATAAGATCTACATAAGTAA+TGG + Chr6:1682141-1682160 MsG0680030399.01.T01:intron 20.0%
!! AATGAATAAATCATAAATCC+AGG + Chr6:1684190-1684209 MsG0680030399.01.T01:intron 20.0%
!! AATTGAATAAAATTCATGCA+AGG + Chr6:1687712-1687731 MsG0680030399.01.T01:intron 20.0%
!! ACAAGAAAAATCAACTTAAA+AGG - Chr6:1689674-1689693 None:intergenic 20.0%
!! ACTCGTTATAGTTATTAAAA+TGG - Chr6:1685082-1685101 None:intergenic 20.0%
!! AGATTTGATACTAAACTTTA+TGG + Chr6:1682727-1682746 MsG0680030399.01.T01:intron 20.0%
!! ATATTATCGTAAAATTTCAC+GGG + Chr6:1685436-1685455 MsG0680030399.01.T01:intron 20.0%
!! ATTAAAATCACATATCAAGA+AGG + Chr6:1684097-1684116 MsG0680030399.01.T01:intron 20.0%
!! CATATTAATTATAATCTGCA+TGG + Chr6:1688012-1688031 MsG0680030399.01.T01:intron 20.0%
!! CTCGTTATAGTTATTAAAAT+GGG - Chr6:1685081-1685100 None:intergenic 20.0%
!! CTTCCTCAATTATTTAAATA+AGG - Chr6:1687809-1687828 None:intergenic 20.0%
!! GAAAATTTGTGAATAATAGT+AGG - Chr6:1681002-1681021 None:intergenic 20.0%
!! GAGATAATAAGTAGTTTAAT+TGG + Chr6:1683825-1683844 MsG0680030399.01.T01:intron 20.0%
!! GATAAATATATATGAGTCTA+TGG + Chr6:1684828-1684847 MsG0680030399.01.T01:intron 20.0%
!! GTGGAATAAAATAAACAAAT+TGG + Chr6:1683999-1684018 MsG0680030399.01.T01:intron 20.0%
!! GTGTAACATAATAATTGTTA+CGG + Chr6:1683298-1683317 MsG0680030399.01.T01:intron 20.0%
!! TAAAAAGTCGTGATATTATA+AGG - Chr6:1687633-1687652 None:intergenic 20.0%
!! TAAATGTTATATTCAGTTGT+TGG - Chr6:1681485-1681504 None:intergenic 20.0%
!! TACTTATTAAGTCATTCATT+TGG + Chr6:1679914-1679933 MsG0680030399.01.T01:intron 20.0%
!! TCACAAATATAAGGTTATAA+TGG + Chr6:1683518-1683537 MsG0680030399.01.T01:intron 20.0%
!! TGATAAGTTAAATTGAGTTT+GGG - Chr6:1683487-1683506 None:intergenic 20.0%
!! TTGATAAGTTAAATTGAGTT+TGG - Chr6:1683488-1683507 None:intergenic 20.0%
!! TTTAATTCTTAATGATTTCC+TGG - Chr6:1684211-1684230 None:intergenic 20.0%
!!! AAATTTTATGAGAAGATTGA+GGG + Chr6:1683116-1683135 MsG0680030399.01.T01:intron 20.0%
!!! AACAGAAGATATTTTTTGTT+TGG + Chr6:1688543-1688562 MsG0680030399.01.T01:intron 20.0%
!!! AAGGAGTTACTTTAAAAAAT+GGG - Chr6:1682826-1682845 None:intergenic 20.0%
!!! AAGTTTTTTTTTTTCTTTGG+TGG + Chr6:1682776-1682795 MsG0680030399.01.T01:intron 20.0%
!!! AATTCGACTGAAATATTTTT+TGG - Chr6:1682475-1682494 None:intergenic 20.0%
!!! ATAGAAGTTTAAGATTACAA+AGG - Chr6:1681198-1681217 None:intergenic 20.0%
!!! ATCTATTTTGTTAGATAGTT+TGG + Chr6:1686342-1686361 MsG0680030399.01.T01:intron 20.0%
!!! ATCTTTTGTTAGTAAATTGA+CGG - Chr6:1686401-1686420 None:intergenic 20.0%
!!! ATGAGTATATGTTTGTTTTA+CGG + Chr6:1685250-1685269 MsG0680030399.01.T01:intron 20.0%
!!! ATTCTGTTTTCATATATTGA+GGG - Chr6:1683443-1683462 None:intergenic 20.0%
!!! CAAACAGGTATTTTTTTTTA+AGG + Chr6:1679790-1679809 MsG0680030399.01.T01:five_prime_UTR 20.0%
!!! CTTCTAAAAGAATAAAAGAA+TGG - Chr6:1681576-1681595 None:intergenic 20.0%
!!! CTTTATTTCAAATCCAAAAA+TGG + Chr6:1679622-1679641 MsG0680030399.01.T01:five_prime_UTR 20.0%
!!! GAAAAATTTGGTGAAATATT+AGG - Chr6:1680877-1680896 None:intergenic 20.0%
!!! GAATAAATATTGTTGACTTA+TGG + Chr6:1688441-1688460 MsG0680030399.01.T01:intron 20.0%
!!! GTCAATTTTTTTTTACACAT+GGG + Chr6:1688358-1688377 MsG0680030399.01.T01:intron 20.0%
!!! GTTAAATTTTACTCATGATT+CGG + Chr6:1680749-1680768 MsG0680030399.01.T01:intron 20.0%
!!! TAAGGAGTTACTTTAAAAAA+TGG - Chr6:1682827-1682846 None:intergenic 20.0%
!!! TAGAAGTTTAAGATTACAAA+GGG - Chr6:1681197-1681216 None:intergenic 20.0%
!!! TATCTCACTATTTTTTTTAC+AGG + Chr6:1685367-1685386 MsG0680030399.01.T01:intron 20.0%
!!! TATTCTGTTTTCATATATTG+AGG - Chr6:1683444-1683463 None:intergenic 20.0%
!!! TCTCTAATGTATGTATATTT+TGG + Chr6:1680461-1680480 MsG0680030399.01.T01:intron 20.0%
!!! TCTTATTTCAGAAATCTAAT+GGG + Chr6:1684794-1684813 MsG0680030399.01.T01:intron 20.0%
!!! TGTTAGCATATGTTTTTATA+TGG + Chr6:1685394-1685413 MsG0680030399.01.T01:intron 20.0%
!!! TTCTTATTTCAGAAATCTAA+TGG + Chr6:1684793-1684812 MsG0680030399.01.T01:intron 20.0%
!!! TTTGGATTTGAAATAAAGAA+AGG - Chr6:1679620-1679639 None:intergenic 20.0%
!!! TTTTTCTCTTCACAAATATA+AGG + Chr6:1683509-1683528 MsG0680030399.01.T01:intron 20.0%
!!! TTTTTTTTTATATCCGGATA+TGG + Chr6:1688101-1688120 MsG0680030399.01.T01:intron 20.0%
! AAAAAATTGGTCATGGTTAT+CGG + Chr6:1680384-1680403 MsG0680030399.01.T01:intron 25.0%
! AAAACCTGGATAAAATTGAT+TGG - Chr6:1688084-1688103 None:intergenic 25.0%
! AAACATTATTAGTCATATGG+CGG - Chr6:1679879-1679898 None:intergenic 25.0%
! AAACCTGGATAAAATTGATT+GGG - Chr6:1688083-1688102 None:intergenic 25.0%
! AAAGTGTGAAGAGAAAAATT+TGG - Chr6:1680889-1680908 None:intergenic 25.0%
! AAATGTCCTTGTTACATATA+TGG + Chr6:1686721-1686740 MsG0680030399.01.T01:intron 25.0%
! AAGGCAATAATTTGGAAAAA+TGG - Chr6:1680330-1680349 None:intergenic 25.0%
! AATAGGAAAGATAATGAAGT+GGG + Chr6:1682047-1682066 MsG0680030399.01.T01:intron 25.0%
! AATGTGTCCTTTAATTAGTT+TGG + Chr6:1686309-1686328 MsG0680030399.01.T01:intron 25.0%
! AATTGAGATGAGCAATAAAT+TGG + Chr6:1682339-1682358 MsG0680030399.01.T01:intron 25.0%
! ACAAAAATTGCTACAACTTA+TGG + Chr6:1689199-1689218 MsG0680030399.01.T01:intron 25.0%
! ACAAGACATTCACAAATAAT+TGG - Chr6:1685938-1685957 None:intergenic 25.0%
! ACCAAATTCAAATGATTACA+TGG + Chr6:1686673-1686692 MsG0680030399.01.T01:intron 25.0%
! ACGAATTAAACCTTAACAAA+GGG - Chr6:1679949-1679968 None:intergenic 25.0%
! AGAGAAAAAGAAACTGAAAA+AGG - Chr6:1681129-1681148 None:intergenic 25.0%
! AGATTACAATTAAGGATCTT+TGG - Chr6:1683070-1683089 None:intergenic 25.0%
! AGTGAATTAATTAGATTCTG+GGG + Chr6:1680159-1680178 MsG0680030399.01.T01:intron 25.0%
! ATAAACAAATTGGCATAAAG+AGG + Chr6:1684009-1684028 MsG0680030399.01.T01:intron 25.0%
! ATAAGGTTTGATTCATTCTA+AGG + Chr6:1680521-1680540 MsG0680030399.01.T01:intron 25.0%
! ATAGCATATAAAGTTACCAA+TGG - Chr6:1687772-1687791 None:intergenic 25.0%
! ATATCTAATAAGACCTTGTT+TGG + Chr6:1686998-1687017 MsG0680030399.01.T01:intron 25.0%
! ATCATTAGAGTATGTAACAT+TGG + Chr6:1688822-1688841 MsG0680030399.01.T01:intron 25.0%
! ATTCCCGTATAAAAACATAT+AGG - Chr6:1684880-1684899 None:intergenic 25.0%
! ATTTATTGCTCATCTCAATT+CGG - Chr6:1682339-1682358 None:intergenic 25.0%
! CAAAAATTGCTACAACTTAT+GGG + Chr6:1689200-1689219 MsG0680030399.01.T01:intron 25.0%
! CAAACATTAGCAACTAAATA+TGG - Chr6:1688900-1688919 None:intergenic 25.0%
! CACAAAAAAGGAAATGAAAA+TGG - Chr6:1689310-1689329 None:intergenic 25.0%
! CAGTGAATTAATTAGATTCT+GGG + Chr6:1680158-1680177 MsG0680030399.01.T01:intron 25.0%
! CCAAATTCAAATGATTACAT+GGG + Chr6:1686674-1686693 MsG0680030399.01.T01:intron 25.0%
! CTAACAAAATAGATAATTCG+AGG - Chr6:1686336-1686355 None:intergenic 25.0%
! CTAATGATCTGTTTATGTTA+AGG - Chr6:1688810-1688829 None:intergenic 25.0%
! CTTTATCTTTATTGCAAACA+TGG + Chr6:1682233-1682252 MsG0680030399.01.T01:intron 25.0%
! GAAGAAATATGGATAGTAAA+TGG - Chr6:1689227-1689246 None:intergenic 25.0%
! GAGGAAAAATGAGTAAATTA+AGG + Chr6:1683969-1683988 MsG0680030399.01.T01:intron 25.0%
! GATTCAAGTCATAAATCAAA+CGG - Chr6:1680617-1680636 None:intergenic 25.0%
! GCAAAGAAAGATTACAATTA+AGG - Chr6:1683078-1683097 None:intergenic 25.0%
! GCATGTGTTTGTAAAAAAAA+TGG - Chr6:1681315-1681334 None:intergenic 25.0%
! GTCAAACATTATTAGTCATA+TGG - Chr6:1679882-1679901 None:intergenic 25.0%
! GTTTATTTAACCCTTTGTTA+AGG + Chr6:1679936-1679955 MsG0680030399.01.T01:intron 25.0%
! TACGAATTAAACCTTAACAA+AGG - Chr6:1679950-1679969 None:intergenic 25.0%
! TATCAATGATTGACAGAAAA+AGG + Chr6:1682273-1682292 MsG0680030399.01.T01:intron 25.0%
! TATGATACACTATGATGATA+AGG + Chr6:1680504-1680523 MsG0680030399.01.T01:intron 25.0%
! TATTGAGTAAAGTTTACGTA+GGG - Chr6:1687664-1687683 None:intergenic 25.0%
! TTAAACAATATAGCCAAACA+AGG - Chr6:1687014-1687033 None:intergenic 25.0%
! TTAACTCTTTCAAAAGAGTA+AGG + Chr6:1689431-1689450 MsG0680030399.01.T01:three_prime_UTR 25.0%
! TTCCCGTATAAAAACATATA+GGG - Chr6:1684879-1684898 None:intergenic 25.0%
! TTTAAATAATTGAGGAAGAG+TGG + Chr6:1687811-1687830 MsG0680030399.01.T01:intron 25.0%
!! ACCTTTGATCTACTAATTTT+CGG - Chr6:1685885-1685904 None:intergenic 25.0%
!! ACTATTTTCAGATTAGTGTT+AGG + Chr6:1688749-1688768 MsG0680030399.01.T01:intron 25.0%
!! AGTATGTAACATTGGTATTT+TGG + Chr6:1688830-1688849 MsG0680030399.01.T01:intron 25.0%
!! ATTCTGTTTTCATACATTGA+GGG - Chr6:1684350-1684369 None:intergenic 25.0%
!! CTATCATGTTTTTCTTTCTT+AGG + Chr6:1681379-1681398 MsG0680030399.01.T01:intron 25.0%
!! CTTCTGTTTTACATGAAATA+TGG - Chr6:1688531-1688550 None:intergenic 25.0%
!! GAAATTTTATGAGAAGATTG+AGG + Chr6:1683115-1683134 MsG0680030399.01.T01:intron 25.0%
!! TACTTTACATATTTTCACCA+TGG + Chr6:1685641-1685660 MsG0680030399.01.T01:intron 25.0%
!! TATTCTGTTTTCATACATTG+AGG - Chr6:1684351-1684370 None:intergenic 25.0%
!! TGAATTTTATAGACAACCAT+TGG + Chr6:1687753-1687772 MsG0680030399.01.T01:intron 25.0%
!! TTCAAGTACTTGCAAATTTT+TGG + Chr6:1689163-1689182 MsG0680030399.01.T01:intron 25.0%
!! TTTATGTTCTTCATTTTGCA+GGG + Chr6:1681694-1681713 MsG0680030399.01.T01:intron 25.0%
!! TTTCTTATTATCTAGTTTCG+AGG - Chr6:1684284-1684303 None:intergenic 25.0%
!! TTTTATGTTCTTCATTTTGC+AGG + Chr6:1681693-1681712 MsG0680030399.01.T01:intron 25.0%
!!! AAACAACTTTTAAGACCAAA+AGG - Chr6:1683356-1683375 None:intergenic 25.0%
!!! AAATGCTTTTTATATCGATG+TGG + Chr6:1688235-1688254 MsG0680030399.01.T01:intron 25.0%
!!! AAATTTTGGTTTGGTTATGT+GGG - Chr6:1679483-1679502 None:intergenic 25.0%
!!! AACTGATTTTAAGTTTGTGT+AGG + Chr6:1688490-1688509 MsG0680030399.01.T01:intron 25.0%
!!! ACTCTAAAAGAATCCATTTT+TGG - Chr6:1679638-1679657 None:intergenic 25.0%
!!! ATGGTTATTTCTTATTGATC+TGG - Chr6:1681557-1681576 None:intergenic 25.0%
!!! CATTTTCATTTCCTTTTTTG+TGG + Chr6:1689308-1689327 MsG0680030399.01.T01:intron 25.0%
!!! CCAGGTTTTTTTTTTATATC+CGG + Chr6:1688095-1688114 MsG0680030399.01.T01:intron 25.0%
!!! GAGAATGAGTATTTTGAAAA+GGG - Chr6:1679508-1679527 None:intergenic 25.0%
!!! GGATGTTTTTTGTAATTTGT+TGG + Chr6:1686429-1686448 MsG0680030399.01.T01:intron 25.0%
!!! GGTCAATTTTTTTTTACACA+TGG + Chr6:1688357-1688376 MsG0680030399.01.T01:intron 25.0%
!!! GTAGCTAATCACTTTTTTAT+TGG + Chr6:1680571-1680590 MsG0680030399.01.T01:intron 25.0%
!!! GTTTGTTACTTATCTTTTTC+TGG - Chr6:1682184-1682203 None:intergenic 25.0%
!!! TAGCTGACTAATTGTTATTT+TGG - Chr6:1686599-1686618 None:intergenic 25.0%
!!! TCTCCCTATATGTTTTTATA+CGG + Chr6:1684873-1684892 MsG0680030399.01.T01:intron 25.0%
!!! TGAGAATGAGTATTTTGAAA+AGG - Chr6:1679509-1679528 None:intergenic 25.0%
!!! TGAGTATATGTTTGTTTTAC+GGG + Chr6:1685251-1685270 MsG0680030399.01.T01:intron 25.0%
!!! TGATGGATATCTAATTGTTT+TGG + Chr6:1686815-1686834 MsG0680030399.01.T01:intron 25.0%
!!! TGTTTTCAGCTTATTTCTAT+AGG - Chr6:1687149-1687168 None:intergenic 25.0%
!!! TGTTTTGAGCAAAAAACTAA+TGG + Chr6:1687332-1687351 MsG0680030399.01.T01:CDS 25.0%
!!! TTATTTTTTTTGTTGGGTGA+GGG + Chr6:1689529-1689548 MsG0680030399.01.T01:three_prime_UTR 25.0%
!!! TTTATTTTTTTTGTTGGGTG+AGG + Chr6:1689528-1689547 MsG0680030399.01.T01:three_prime_UTR 25.0%
!!! TTTTGAAAAGGGTGAAATTT+TGG - Chr6:1679497-1679516 None:intergenic 25.0%
AAATAACGTGGCTAAAAAAC+CGG + Chr6:1683888-1683907 MsG0680030399.01.T01:intron 30.0%
AAATAAGAAAACGTGGCAAT+AGG + Chr6:1682030-1682049 MsG0680030399.01.T01:intron 30.0%
AAATGTAATTAGAGTCGTGT+TGG - Chr6:1680300-1680319 None:intergenic 30.0%
AAATTGAGTTTGGGTAGTAA+AGG - Chr6:1683478-1683497 None:intergenic 30.0%
AATAAGCTGAAAACAGTTGA+TGG + Chr6:1687154-1687173 MsG0680030399.01.T01:intron 30.0%
AATAGAGAGAACCGATAATT+TGG + Chr6:1683147-1683166 MsG0680030399.01.T01:intron 30.0%
AATGAATTATTGCTTGCAAG+TGG + Chr6:1683189-1683208 MsG0680030399.01.T01:intron 30.0%
AATTATGCTTCCTTTGTCTT+TGG - Chr6:1689413-1689432 None:intergenic 30.0%
ACAATTAAGGATCTTTGGTT+AGG - Chr6:1683065-1683084 None:intergenic 30.0%
ACATTAGTACTTGTATGCAT+AGG - Chr6:1687044-1687063 None:intergenic 30.0%
ACCGAAAATTAGTAGATCAA+AGG + Chr6:1685881-1685900 MsG0680030399.01.T01:intron 30.0%
ACTAACAAAAGATACACTCA+TGG + Chr6:1686408-1686427 MsG0680030399.01.T01:intron 30.0%
ACTCGTTGTAGTTACTAAAA+TGG - Chr6:1683736-1683755 None:intergenic 30.0%
ACTTATCAACATAACATCCA+AGG + Chr6:1682005-1682024 MsG0680030399.01.T01:intron 30.0%
AGGTTTGATGAGAGAAAATA+AGG - Chr6:1679407-1679426 None:intergenic 30.0%
AGTAAATTAAGGAGATGATG+TGG + Chr6:1683980-1683999 MsG0680030399.01.T01:intron 30.0%
ATAAAGTATATGTGGGTGTA+TGG + Chr6:1685175-1685194 MsG0680030399.01.T01:intron 30.0%
ATAGTGTGAAGAAAGAATGA+AGG - Chr6:1681101-1681120 None:intergenic 30.0%
ATGAATTATTGCTTGCAAGT+GGG + Chr6:1683190-1683209 MsG0680030399.01.T01:intron 30.0%
ATGTATCAATAAAAACCCGT+TGG + Chr6:1685033-1685052 MsG0680030399.01.T01:intron 30.0%
ATTTCCGAGTTTGTCATTAA+AGG + Chr6:1688697-1688716 MsG0680030399.01.T01:intron 30.0%
CAAATCTACAACATTGATCA+TGG - Chr6:1682714-1682733 None:intergenic 30.0%
CAACAGGAAAAATGAAATGA+TGG - Chr6:1687488-1687507 None:intergenic 30.0%
CAATAGGAAAGATAATGAAG+TGG + Chr6:1682046-1682065 MsG0680030399.01.T01:intron 30.0%
CATGGGTAAAAACGTAAAAT+TGG - Chr6:1680854-1680873 None:intergenic 30.0%
CCCATGTAATCATTTGAATT+TGG - Chr6:1686677-1686696 None:intergenic 30.0%
CCGGATATAAAAAAAAAACC+TGG - Chr6:1688098-1688117 None:intergenic 30.0%
CTAATTAAAGGACACATTCA+TGG - Chr6:1686307-1686326 None:intergenic 30.0%
CTATTGAGTAAAGTTTACGT+AGG - Chr6:1687665-1687684 None:intergenic 30.0%
CTCCATGATAAAAGGAAAAT+TGG - Chr6:1688723-1688742 None:intergenic 30.0%
CTCGTTGTAGTTACTAAAAT+GGG - Chr6:1683735-1683754 None:intergenic 30.0%
CTCTTTACAAAGCTATCAAA+TGG + Chr6:1681908-1681927 MsG0680030399.01.T01:intron 30.0%
CTGTATAGTAGAAAATGACT+TGG + Chr6:1686764-1686783 MsG0680030399.01.T01:intron 30.0%
CTTCAACATTTACAACAAAC+AGG + Chr6:1679775-1679794 MsG0680030399.01.T01:five_prime_UTR 30.0%
GCAGTGAATTAATTAGATTC+TGG + Chr6:1680157-1680176 MsG0680030399.01.T01:intron 30.0%
GCATAAAAGGTTATCTGAAA+TGG + Chr6:1682866-1682885 MsG0680030399.01.T01:intron 30.0%
GTGACATCAATAATTGATGT+TGG + Chr6:1688961-1688980 MsG0680030399.01.T01:intron 30.0%
GTGAGAAAGAGAAAGATAAA+AGG + Chr6:1683216-1683235 MsG0680030399.01.T01:intron 30.0%
GTTAGCAGATGATATATCAA+TGG + Chr6:1682300-1682319 MsG0680030399.01.T01:intron 30.0%
TAGCAGAACTACATACTATT+TGG - Chr6:1687210-1687229 None:intergenic 30.0%
TAGCATGTTACATCCTATAT+AGG + Chr6:1687842-1687861 MsG0680030399.01.T01:intron 30.0%
TCTTACCATATACATGTTAG+TGG + Chr6:1680409-1680428 MsG0680030399.01.T01:intron 30.0%
TGAAATCAAATCCAGTTATG+TGG + Chr6:1688187-1688206 MsG0680030399.01.T01:intron 30.0%
TGCAAGTACTTGAAAATATG+TGG - Chr6:1689157-1689176 None:intergenic 30.0%
TGCAGTGAGAGAAATTAAAA+TGG - Chr6:1681830-1681849 None:intergenic 30.0%
TTAAAACCAATCCACATAAC+TGG - Chr6:1688201-1688220 None:intergenic 30.0%
TTACAATTGTACACATCCAA+CGG - Chr6:1683705-1683724 None:intergenic 30.0%
TTATTATGTTACACTGTGCA+TGG - Chr6:1683292-1683311 None:intergenic 30.0%
TTGTTGATATGAGCTTCAAA+TGG - Chr6:1682671-1682690 None:intergenic 30.0%
TTTATATCCGGATATGGATT+TGG + Chr6:1688107-1688126 MsG0680030399.01.T01:intron 30.0%
TTTGGAAGAAAGAAGAAGAT+GGG - Chr6:1679580-1679599 None:intergenic 30.0%
TTTGGGTAGTAAAGGAATAA+TGG - Chr6:1683470-1683489 None:intergenic 30.0%
TTTGGTGAAATATTAGGCAT+GGG - Chr6:1680871-1680890 None:intergenic 30.0%
! AAGTAGTTTAATTGGCTTAG+TGG + Chr6:1683833-1683852 MsG0680030399.01.T01:intron 30.0%
! AAGTTTAAGATTACAAAGGG+AGG - Chr6:1681194-1681213 None:intergenic 30.0%
! ACAAACTTGCGATTAGATTT+TGG - Chr6:1682605-1682624 None:intergenic 30.0%
! ATTCCCAATCAATTTTATCC+AGG + Chr6:1688077-1688096 MsG0680030399.01.T01:intron 30.0%
! ATTGAGGGTACATATATTGA+GGG - Chr6:1683428-1683447 None:intergenic 30.0%
! ATTTGGTGAAATATTAGGCA+TGG - Chr6:1680872-1680891 None:intergenic 30.0%
! CAATTTTCCTTTTATCATGG+AGG + Chr6:1688721-1688740 MsG0680030399.01.T01:intron 30.0%
! CATTAGAGATTTGTTCAGTT+TGG - Chr6:1680450-1680469 None:intergenic 30.0%
! CATTCTCTTTTAACACAAGA+AGG + Chr6:1680245-1680264 MsG0680030399.01.T01:intron 30.0%
! CATTGGTAATCAATTTGATC+TGG + Chr6:1685838-1685857 MsG0680030399.01.T01:intron 30.0%
! CTGTTTTCATACGTAGAAAA+AGG - Chr6:1683573-1683592 None:intergenic 30.0%
! GCTATGTATAAGATCCATTT+TGG + Chr6:1687890-1687909 MsG0680030399.01.T01:intron 30.0%
! GGTACCATATGCTATATTTT+CGG + Chr6:1687507-1687526 MsG0680030399.01.T01:CDS 30.0%
! GTAACAAGGACATTTTCTTA+GGG - Chr6:1686716-1686735 None:intergenic 30.0%
! TATTGAGGGTACATATATTG+AGG - Chr6:1683429-1683448 None:intergenic 30.0%
! TGTAACAAGGACATTTTCTT+AGG - Chr6:1686717-1686736 None:intergenic 30.0%
! TTACTCATGATTCGGAAAAT+AGG + Chr6:1680757-1680776 MsG0680030399.01.T01:intron 30.0%
! TTATGTTCTTCATTTTGCAG+GGG + Chr6:1681695-1681714 MsG0680030399.01.T01:intron 30.0%
! TTCTAAGGAATCACTAAGTT+AGG + Chr6:1680536-1680555 MsG0680030399.01.T01:intron 30.0%
! TTGTTGATAAATCACGTATC+CGG + Chr6:1688130-1688149 MsG0680030399.01.T01:intron 30.0%
! TTTTTCTCTTCACACTTTCA+AGG + Chr6:1680891-1680910 MsG0680030399.01.T01:intron 30.0%
!! AATTAATTAGATTCTGGGGT+GGG + Chr6:1680163-1680182 MsG0680030399.01.T01:intron 30.0%
!! AGGACGAAACTATTTTAAAG+GGG - Chr6:1684264-1684283 None:intergenic 30.0%
!! CATCATTTCATTTTTCCTGT+TGG + Chr6:1687486-1687505 MsG0680030399.01.T01:CDS 30.0%
!! CCAAAATCGATGTTTTTCAA+CGG - Chr6:1686223-1686242 None:intergenic 30.0%
!! CTCCCTATATGTTTTTATAC+GGG + Chr6:1684874-1684893 MsG0680030399.01.T01:intron 30.0%
!! GAGGACGAAACTATTTTAAA+GGG - Chr6:1684265-1684284 None:intergenic 30.0%
!! TTAGGAGTATGTTCTTTTTG+AGG + Chr6:1689566-1689585 MsG0680030399.01.T01:three_prime_UTR 30.0%
!!! AAAAGGGTGAAATTTTGGTT+TGG - Chr6:1679492-1679511 None:intergenic 30.0%
!!! CAAAGTGATTTTTTTGTCCA+TGG - Chr6:1685661-1685680 None:intergenic 30.0%
!!! CTTTTAAGACCAAAAGGAAT+TGG - Chr6:1683350-1683369 None:intergenic 30.0%
!!! GAAATTTTGGTTTGGTTATG+TGG - Chr6:1679484-1679503 None:intergenic 30.0%
!!! GTGAGTACATGTTTGTTTTA+CGG + Chr6:1684755-1684774 MsG0680030399.01.T01:intron 30.0%
!!! TATTTTTTTTGTTGGGTGAG+GGG + Chr6:1689530-1689549 MsG0680030399.01.T01:three_prime_UTR 30.0%
!!! TGAGTACATGTTTGTTTTAC+GGG + Chr6:1684756-1684775 MsG0680030399.01.T01:intron 30.0%
!!! TTTTTTGTGTAGCTTTGATC+TGG - Chr6:1682406-1682425 None:intergenic 30.0%
AAAACTAATGGCTAACGAAG+AGG + Chr6:1687344-1687363 MsG0680030399.01.T01:CDS 35.0%
AAGTAGGCATCTGTTCATTT+AGG - Chr6:1686864-1686883 None:intergenic 35.0%
ACAGTTACAACATTCCAGTT+CGG + Chr6:1685807-1685826 MsG0680030399.01.T01:intron 35.0%
AGACACCACTAACATGTATA+TGG - Chr6:1680417-1680436 None:intergenic 35.0%
AGAGATTACCGTGGAATAAA+TGG + Chr6:1683003-1683022 MsG0680030399.01.T01:intron 35.0%
ATATAGCATATGGTACCAAC+AGG - Chr6:1687504-1687523 None:intergenic 35.0%
ATCAAACCAATCAATCCACT+AGG - Chr6:1686459-1686478 None:intergenic 35.0%
ATGAACAGATGCCTACTTTA+TGG + Chr6:1686866-1686885 MsG0680030399.01.T01:intron 35.0%
ATGAAGGGAAACAAACTTCT+GGG + Chr6:1679693-1679712 MsG0680030399.01.T01:five_prime_UTR 35.0%
ATGACGCCATATATGTAACA+AGG - Chr6:1686730-1686749 None:intergenic 35.0%
ATGACTGAAGTCTCTTTCAA+TGG + Chr6:1686937-1686956 MsG0680030399.01.T01:intron 35.0%
ATGCAAGGACTAAGCAAAAA+AGG + Chr6:1687727-1687746 MsG0680030399.01.T01:intron 35.0%
ATGTTGGAGCTTAATGCATT+TGG + Chr6:1688977-1688996 MsG0680030399.01.T01:intron 35.0%
CAAGGCAAAATAAGAAAACG+TGG + Chr6:1682023-1682042 MsG0680030399.01.T01:intron 35.0%
CAATGATTGACAGAAAAAGG+AGG + Chr6:1682276-1682295 MsG0680030399.01.T01:intron 35.0%
CACATATCAAGAAGGTCATT+TGG + Chr6:1684105-1684124 MsG0680030399.01.T01:intron 35.0%
CAGAAACTTCTTGTATGAGA+TGG - Chr6:1688396-1688415 None:intergenic 35.0%
CATAGAGATTATGCATGTTG+AGG - Chr6:1679427-1679446 None:intergenic 35.0%
CATCTCATACAAGAAGTTTC+TGG + Chr6:1688394-1688413 MsG0680030399.01.T01:intron 35.0%
CATTGAGGGTAGATAGATTA+CGG - Chr6:1684336-1684355 None:intergenic 35.0%
CCAAATTAGGACCACAAAAA+AGG - Chr6:1689322-1689341 None:intergenic 35.0%
CCACAAAACTTAGACAATTG+CGG - Chr6:1683802-1683821 None:intergenic 35.0%
CCTATTTCCCATTTATTCCA+CGG - Chr6:1683014-1683033 None:intergenic 35.0%
CTAAAGCAAGAATAACTTCG+TGG + Chr6:1686972-1686991 MsG0680030399.01.T01:intron 35.0%
CTATTGTCAACAGCTATCAT+TGG + Chr6:1680974-1680993 MsG0680030399.01.T01:intron 35.0%
CTCTTCCATCTCCAAATTAT+CGG - Chr6:1683161-1683180 None:intergenic 35.0%
CTTCTCTTCTACCTATAGTT+GGG + Chr6:1686896-1686915 MsG0680030399.01.T01:intron 35.0%
CTTTGAGCAACAAAATAACG+TGG + Chr6:1683876-1683895 MsG0680030399.01.T01:intron 35.0%
GAAAAAATAACAGCACTAGC+AGG + Chr6:1681850-1681869 MsG0680030399.01.T01:intron 35.0%
GAAAGAACAACAGTGAAGAA+AGG - Chr6:1686139-1686158 None:intergenic 35.0%
GAAAGGTTCCATAGATTTGA+TGG - Chr6:1686122-1686141 None:intergenic 35.0%
GAACATTCTCTATTGTTGAC+TGG - Chr6:1681744-1681763 None:intergenic 35.0%
GAAGAACATAAAATGCAGCT+CGG - Chr6:1681686-1681705 None:intergenic 35.0%
GAAGAAGAAGAAGAAGAAGA+AGG + Chr6:1682928-1682947 MsG0680030399.01.T01:intron 35.0%
GAAGGAGAATAATTGTCCTA+CGG + Chr6:1683251-1683270 MsG0680030399.01.T01:intron 35.0%
GAGATTACCGTGGAATAAAT+GGG + Chr6:1683004-1683023 MsG0680030399.01.T01:intron 35.0%
GATGATATATCAATGGAGAG+AGG + Chr6:1682307-1682326 MsG0680030399.01.T01:intron 35.0%
GCATGCAAAAAAATTGGTCA+TGG + Chr6:1680377-1680396 MsG0680030399.01.T01:intron 35.0%
GGAATCACTAAGTTAGGATA+TGG + Chr6:1680542-1680561 MsG0680030399.01.T01:intron 35.0%
GGAGTGTACAATTGTAACAT+AGG + Chr6:1685054-1685073 MsG0680030399.01.T01:intron 35.0%
GTGAAGACTTTCTAACAGTT+TGG - Chr6:1679598-1679617 None:intergenic 35.0%
GTTACAATTGTACACTCCAA+CGG - Chr6:1685052-1685071 None:intergenic 35.0%
GTTTGGAAGAAAGAAGAAGA+TGG - Chr6:1679581-1679600 None:intergenic 35.0%
TAATAAAACTTAGGCAGTCG+TGG - Chr6:1684679-1684698 None:intergenic 35.0%
TACAATTGTACACATCCAAC+GGG - Chr6:1683704-1683723 None:intergenic 35.0%
TAGGACTGAAAATCGAGTAA+AGG + Chr6:1686642-1686661 MsG0680030399.01.T01:intron 35.0%
TATTAGTCATATGGCGGTTA+TGG - Chr6:1679873-1679892 None:intergenic 35.0%
TCAAACCAATCAATCCACTA+GGG - Chr6:1686458-1686477 None:intergenic 35.0%
TCAAATCCAGTTATGTGGAT+TGG + Chr6:1688192-1688211 MsG0680030399.01.T01:intron 35.0%
TCAACAACCAAATCCATATC+CGG - Chr6:1688117-1688136 None:intergenic 35.0%
TCGAGGACCAAACTAATTAA+AGG - Chr6:1686319-1686338 None:intergenic 35.0%
TCTGTCTCTTACATGTAACT+CGG + Chr6:1683378-1683397 MsG0680030399.01.T01:intron 35.0%
TCTTCTCTTCTACCTATAGT+TGG + Chr6:1686895-1686914 MsG0680030399.01.T01:intron 35.0%
TGAACAGATGCCTACTTTAT+GGG + Chr6:1686867-1686886 MsG0680030399.01.T01:intron 35.0%
TGTATCACTAAAAAACCCGT+TGG + Chr6:1683686-1683705 MsG0680030399.01.T01:intron 35.0%
TTACAATTGTACACTCCAAC+GGG - Chr6:1685051-1685070 None:intergenic 35.0%
TTCTCTTCTACCTATAGTTG+GGG + Chr6:1686897-1686916 MsG0680030399.01.T01:intron 35.0%
TTTGCTTGAATTCTTGCTTC+AGG + Chr6:1683093-1683112 MsG0680030399.01.T01:intron 35.0%
! ACCATATGCTATATTTTCGG+AGG + Chr6:1687510-1687529 MsG0680030399.01.T01:CDS 35.0%
! CACATGTGCAATGAAGATTT+TGG + Chr6:1688299-1688318 MsG0680030399.01.T01:intron 35.0%
! CACGCAGTTTAGTAATTTGT+AGG + Chr6:1686623-1686642 MsG0680030399.01.T01:intron 35.0%
! CCATATGCTATATTTTCGGA+GGG + Chr6:1687511-1687530 MsG0680030399.01.T01:CDS 35.0%
! CTCTTAGGTAAGATTGATTC+TGG + Chr6:1687230-1687249 MsG0680030399.01.T01:intron 35.0%
! GAATGAGCAACTAAGCTTTT+AGG - Chr6:1688053-1688072 None:intergenic 35.0%
! GAATTAATTAGATTCTGGGG+TGG + Chr6:1680162-1680181 MsG0680030399.01.T01:intron 35.0%
! GATCTACTAATTTTCGGTCT+GGG - Chr6:1685879-1685898 None:intergenic 35.0%
! GGCCAATTTTCCTTTTATCA+TGG + Chr6:1688718-1688737 MsG0680030399.01.T01:intron 35.0%
! GTTATCTGAAATGGCCAATT+GGG + Chr6:1682875-1682894 MsG0680030399.01.T01:intron 35.0%
! GTTCTTTCATCCCTTCTTTT+GGG + Chr6:1686151-1686170 MsG0680030399.01.T01:CDS 35.0%
! TAGTTTAATTGGCTTAGTGG+AGG + Chr6:1683836-1683855 MsG0680030399.01.T01:intron 35.0%
! TATGTAGTTCTGCTACTCTT+AGG + Chr6:1687215-1687234 MsG0680030399.01.T01:intron 35.0%
! TGATCTACTAATTTTCGGTC+TGG - Chr6:1685880-1685899 None:intergenic 35.0%
! TGGATTTGATTTCACAACAC+CGG - Chr6:1688181-1688200 None:intergenic 35.0%
! TGTTCTTTCATCCCTTCTTT+TGG + Chr6:1686150-1686169 MsG0680030399.01.T01:CDS 35.0%
! TTGGCCTTTAATGACAAACT+CGG - Chr6:1688704-1688723 None:intergenic 35.0%
! TTGGTTTCATGTTTGCTACT+TGG + Chr6:1679735-1679754 MsG0680030399.01.T01:five_prime_UTR 35.0%
! TTTAAGATTACAAAGGGAGG+AGG - Chr6:1681191-1681210 None:intergenic 35.0%
! TTTCCTTTTATCATGGAGGT+CGG + Chr6:1688725-1688744 MsG0680030399.01.T01:intron 35.0%
! TTTTATGAGAAGATTGAGGG+TGG + Chr6:1683119-1683138 MsG0680030399.01.T01:intron 35.0%
!! ATTGTGCGTTGATTAAACAC+GGG + Chr6:1688671-1688690 MsG0680030399.01.T01:intron 35.0%
!! CCATAGTTGCTCATTTTAAC+CGG - Chr6:1688152-1688171 None:intergenic 35.0%
!! CGAGGACGAAACTATTTTAA+AGG - Chr6:1684266-1684285 None:intergenic 35.0%
!! CGCAATTGTCTAAGTTTTGT+GGG + Chr6:1683800-1683819 MsG0680030399.01.T01:intron 35.0%
!! CTTTTGACGAACATTAGTCT+TGG + Chr6:1686070-1686089 MsG0680030399.01.T01:five_prime_UTR 35.0%
!! GATTGTGCGTTGATTAAACA+CGG + Chr6:1688670-1688689 MsG0680030399.01.T01:intron 35.0%
!! TAATTTGTTGGTTTCCCTAG+TGG + Chr6:1686441-1686460 MsG0680030399.01.T01:intron 35.0%
!!! ATTCCTTGTTTTGCTTTCGT+GGG - Chr6:1687690-1687709 None:intergenic 35.0%
!!! CACGTTTTCTTATTTTGCCT+TGG - Chr6:1682025-1682044 None:intergenic 35.0%
!!! CCGTTGAAAAACATCGATTT+TGG + Chr6:1686220-1686239 MsG0680030399.01.T01:intron 35.0%
!!! CCTTTTTTGTGGTCCTAATT+TGG + Chr6:1689319-1689338 MsG0680030399.01.T01:intron 35.0%
!!! GGTTTTAAACCAAGAAGGAA+AGG - Chr6:1686496-1686515 None:intergenic 35.0%
!!! TATTCCTTGTTTTGCTTTCG+TGG - Chr6:1687691-1687710 None:intergenic 35.0%
!!! TTTTGGTTCCTAAATGTACG+AGG - Chr6:1686582-1686601 None:intergenic 35.0%
AAAGAGAGAGAGATAGAGAG+AGG + Chr6:1689455-1689474 MsG0680030399.01.T01:three_prime_UTR 40.0%
AAGAGAGAGAGATAGAGAGA+GGG + Chr6:1689456-1689475 MsG0680030399.01.T01:three_prime_UTR 40.0%
AAGTAGGGTTGCTTATGGAT+AGG - Chr6:1688277-1688296 None:intergenic 40.0%
AATTACATACCGCAGATTGC+AGG - Chr6:1687558-1687577 None:intergenic 40.0%
ACAACTCTGCAAAACCAAGA+AGG + Chr6:1681263-1681282 MsG0680030399.01.T01:five_prime_UTR 40.0%
ACATTACCTCACCCAAAAGA+AGG - Chr6:1686165-1686184 None:intergenic 40.0%
ACCATTAGAGAGACTTACCA+AGG - Chr6:1689134-1689153 None:intergenic 40.0%
ACGTCGACAAGGCAATAATT+TGG - Chr6:1680338-1680357 None:intergenic 40.0%
ACTAGCAGGAAAAGAGAACA+TGG + Chr6:1681864-1681883 MsG0680030399.01.T01:intron 40.0%
AGGGGTTGGATCTCAATATT+AGG + Chr6:1689548-1689567 MsG0680030399.01.T01:three_prime_UTR 40.0%
AGGTGTAAGGTTGAAGAAGA+AGG - Chr6:1679455-1679474 None:intergenic 40.0%
ATGAACGGAAAACACATCCA+GGG - Chr6:1686369-1686388 None:intergenic 40.0%
ATTATTGCTTGCAAGTGGGT+TGG + Chr6:1683194-1683213 MsG0680030399.01.T01:intron 40.0%
CAATCTACACCTTTCCTTCT+TGG + Chr6:1686484-1686503 MsG0680030399.01.T01:intron 40.0%
CACTCACACCATCAAATCTA+TGG + Chr6:1686111-1686130 MsG0680030399.01.T01:exon 40.0%
CATTACCTCACCCAAAAGAA+GGG - Chr6:1686164-1686183 None:intergenic 40.0%
CATTGCACATGTGACAAGTA+GGG - Chr6:1688292-1688311 None:intergenic 40.0%
CCAACCTTACGAATCAATCA+CGG + Chr6:1687307-1687326 MsG0680030399.01.T01:CDS 40.0%
CCATTAGAGAGACTTACCAA+GGG - Chr6:1689133-1689152 None:intergenic 40.0%
CCCTCCGAAAATATAGCATA+TGG - Chr6:1687514-1687533 None:intergenic 40.0%
CCGGTTAAAATGAGCAACTA+TGG + Chr6:1688149-1688168 MsG0680030399.01.T01:intron 40.0%
CCGTGGAATAAATGGGAAAT+AGG + Chr6:1683011-1683030 MsG0680030399.01.T01:intron 40.0%
CTGCAAAACCAAGAAGGAAA+CGG + Chr6:1681269-1681288 MsG0680030399.01.T01:five_prime_UTR 40.0%
CTGTCTCTTACATGTAACTC+GGG + Chr6:1683379-1683398 MsG0680030399.01.T01:intron 40.0%
CTTTATTGCAAACATGGACG+AGG + Chr6:1682239-1682258 MsG0680030399.01.T01:intron 40.0%
GAAAAAGGGTAGGGAACAAA+AGG + Chr6:1683938-1683957 MsG0680030399.01.T01:intron 40.0%
GAAGAAACCACCCATAAAGT+AGG - Chr6:1686880-1686899 None:intergenic 40.0%
GAGAAAAGATTGATGAGCTG+CGG + Chr6:1682435-1682454 MsG0680030399.01.T01:intron 40.0%
GAGAACCGATAATTTGGAGA+TGG + Chr6:1683153-1683172 MsG0680030399.01.T01:intron 40.0%
GAGAATAATTGTCCTACGGT+TGG + Chr6:1683255-1683274 MsG0680030399.01.T01:intron 40.0%
GATGAAGGGAAACAAACTTC+TGG + Chr6:1679692-1679711 MsG0680030399.01.T01:five_prime_UTR 40.0%
GCTCATAAATGAGCAAGTGA+TGG + Chr6:1686798-1686817 MsG0680030399.01.T01:intron 40.0%
GGAAAAGGGTCAAAGTCAAA+TGG + Chr6:1680189-1680208 MsG0680030399.01.T01:intron 40.0%
GGAACAAAAGGAGGAAATTG+AGG + Chr6:1683950-1683969 MsG0680030399.01.T01:intron 40.0%
GGCTAAAAAACCGGAACATA+AGG + Chr6:1683897-1683916 MsG0680030399.01.T01:intron 40.0%
GTTACCGCATGATCAAATGT+TGG + Chr6:1689588-1689607 MsG0680030399.01.T01:three_prime_UTR 40.0%
GTTGCCAACATTTGATCATG+CGG - Chr6:1689595-1689614 None:intergenic 40.0%
GTTGTAACTGTTGCTGGAAA+TGG - Chr6:1685798-1685817 None:intergenic 40.0%
TAATAAAACTCAGGCAGTCG+CGG - Chr6:1685147-1685166 None:intergenic 40.0%
TCACCAAGAGAAAAAGGGTA+GGG + Chr6:1683929-1683948 MsG0680030399.01.T01:intron 40.0%
TCATTGCACATGTGACAAGT+AGG - Chr6:1688293-1688312 None:intergenic 40.0%
TCTCTTCTACCTATAGTTGG+GGG + Chr6:1686898-1686917 MsG0680030399.01.T01:intron 40.0%
TGAGCAACTATGGACATAAC+CGG + Chr6:1688159-1688178 MsG0680030399.01.T01:intron 40.0%
TGCAAAACCAAGAAGGAAAC+GGG + Chr6:1681270-1681289 MsG0680030399.01.T01:five_prime_UTR 40.0%
TGGAATGTTGTAACTGTTGC+TGG - Chr6:1685804-1685823 None:intergenic 40.0%
TGGCGTCATTTGATACATGT+AGG + Chr6:1686741-1686760 MsG0680030399.01.T01:intron 40.0%
TGGGCATGAAAATCCATCAA+TGG - Chr6:1679561-1679580 None:intergenic 40.0%
TGGTGGAGAAATATGAGAAG+AGG + Chr6:1682793-1682812 MsG0680030399.01.T01:intron 40.0%
TTACTTACCCGTTTCCTTCT+TGG - Chr6:1681280-1681299 None:intergenic 40.0%
TTGGAGCTTAATGCATTTGG+TGG + Chr6:1688980-1688999 MsG0680030399.01.T01:intron 40.0%
TTGTTACGGTACTATGCAGT+CGG + Chr6:1683312-1683331 MsG0680030399.01.T01:intron 40.0%
TTGTTAGATAGTTTGGTCCC+TGG + Chr6:1686349-1686368 MsG0680030399.01.T01:intron 40.0%
! AAAAGGCATGCATAGTGAGA+AGG + Chr6:1683233-1683252 MsG0680030399.01.T01:intron 40.0%
! ACTTGAAGCATGTTTCTGAC+AGG + Chr6:1687426-1687445 MsG0680030399.01.T01:intron 40.0%
! ATGTTTCTGACAGGAAGCTT+TGG + Chr6:1687435-1687454 MsG0680030399.01.T01:intron 40.0%
! ATTTGGTGGCAGGTTTCATA+TGG + Chr6:1688994-1689013 MsG0680030399.01.T01:intron 40.0%
! CCGCAATTGTCTAAGTTTTG+TGG + Chr6:1683799-1683818 MsG0680030399.01.T01:intron 40.0%
! GGTTATCTGAAATGGCCAAT+TGG + Chr6:1682874-1682893 MsG0680030399.01.T01:intron 40.0%
! GTGTTTTCCGTTCATCAGTT+TGG + Chr6:1686374-1686393 MsG0680030399.01.T01:intron 40.0%
! GTTTGGTTATGTGGGTTGAA+AGG - Chr6:1679475-1679494 None:intergenic 40.0%
! TATGTGGGTTGAAAGGTGTA+AGG - Chr6:1679468-1679487 None:intergenic 40.0%
! TTTGGTGGCAGGTTTCATAT+GGG + Chr6:1688995-1689014 MsG0680030399.01.T01:intron 40.0%
!! AATCCTTGGCTTGCCTATAT+AGG - Chr6:1687858-1687877 None:intergenic 40.0%
!! CATTCCGTGATTGATTCGTA+AGG - Chr6:1687314-1687333 None:intergenic 40.0%
!! CGATGTTTTTCAACGGATAC+AGG - Chr6:1686216-1686235 None:intergenic 40.0%
!!! CCAATTTTTTTGCATGCCAC+CGG - Chr6:1680374-1680393 None:intergenic 40.0%
!!! CTGCTGGTTTTAAACCAAGA+AGG - Chr6:1686501-1686520 None:intergenic 40.0%
!!! TTCCTTGTTTTGCTTTCGTG+GGG - Chr6:1687689-1687708 None:intergenic 40.0%
AAACCAGCAGAGACAAACAG+AGG + Chr6:1686511-1686530 MsG0680030399.01.T01:intron 45.0%
AAAGGGTAGGGAACAAAAGG+AGG + Chr6:1683941-1683960 MsG0680030399.01.T01:intron 45.0%
AACCAGCAGAGACAAACAGA+GGG + Chr6:1686512-1686531 MsG0680030399.01.T01:intron 45.0%
ACAGATGCCTACTTTATGGG+TGG + Chr6:1686870-1686889 MsG0680030399.01.T01:intron 45.0%
ACATGTTCTCGTCTCCAAAC+AGG + Chr6:1687259-1687278 MsG0680030399.01.T01:CDS 45.0%
AGCAGCCAACGTGTGTATAT+TGG - Chr6:1684038-1684057 None:intergenic 45.0%
ATGTGAAAAACCTCACCTGC+TGG - Chr6:1687938-1687957 None:intergenic 45.0%
ATTCCCCAATGTATGAGCCA+CGG - Chr6:1686050-1686069 None:intergenic 45.0%
CAGGAAAAGAGAACATGGAC+AGG + Chr6:1681869-1681888 MsG0680030399.01.T01:intron 45.0%
CATCCTATATAGGCAAGCCA+AGG + Chr6:1687852-1687871 MsG0680030399.01.T01:intron 45.0%
CCACTTAGACTCACCATTGA+TGG + Chr6:1679545-1679564 MsG0680030399.01.T01:five_prime_UTR 45.0%
CCATCAATGGTGAGTCTAAG+TGG - Chr6:1679548-1679567 None:intergenic 45.0%
CCCTTGGTAAGTCTCTCTAA+TGG + Chr6:1689130-1689149 MsG0680030399.01.T01:intron 45.0%
CCGGTGGCATGCAAAAAAAT+TGG + Chr6:1680371-1680390 MsG0680030399.01.T01:intron 45.0%
CTTGTTCAGTCTCTTCAGCT+TGG + Chr6:1679716-1679735 MsG0680030399.01.T01:five_prime_UTR 45.0%
GAAGCAGAATGCAGCCAAAA+TGG - Chr6:1687907-1687926 None:intergenic 45.0%
GATGAACGGAAAACACATCC+AGG - Chr6:1686370-1686389 None:intergenic 45.0%
GATTGGATTCAGCACTGCAA+TGG + Chr6:1687281-1687300 MsG0680030399.01.T01:CDS 45.0%
GCAGTTCCTGCAACCAAATT+AGG - Chr6:1689335-1689354 None:intergenic 45.0%
GCATTATTCTCACCAACCGT+AGG - Chr6:1683270-1683289 None:intergenic 45.0%
GCTCTCGAACATTCAATCCT+TGG - Chr6:1687872-1687891 None:intergenic 45.0%
GGAACTGCTATTGCACTTGT+TGG + Chr6:1689347-1689366 MsG0680030399.01.T01:intron 45.0%
GGACACCAATATACACACGT+TGG + Chr6:1684030-1684049 MsG0680030399.01.T01:intron 45.0%
GGTAGTCAAAGCTAGATGAC+TGG + Chr6:1682748-1682767 MsG0680030399.01.T01:intron 45.0%
GTCACCAAGAGAAAAAGGGT+AGG + Chr6:1683928-1683947 MsG0680030399.01.T01:intron 45.0%
GTGACAAGTAGGGTTGCTTA+TGG - Chr6:1688282-1688301 None:intergenic 45.0%
GTGCTGAATCCAATCCTGTT+TGG - Chr6:1687276-1687295 None:intergenic 45.0%
GTGGGTCACCAAGAGAAAAA+GGG + Chr6:1683924-1683943 MsG0680030399.01.T01:intron 45.0%
TAAGCCAGTGCCAAAGACAA+AGG + Chr6:1689400-1689419 MsG0680030399.01.T01:CDS 45.0%
TGGTTCCTAAATGTACGAGG+CGG - Chr6:1686579-1686598 None:intergenic 45.0%
TGTGGGTCACCAAGAGAAAA+AGG + Chr6:1683923-1683942 MsG0680030399.01.T01:intron 45.0%
TGTGGTCCTAATTTGGTTGC+AGG + Chr6:1689326-1689345 MsG0680030399.01.T01:intron 45.0%
TTCTCGTCTCCAAACAGGAT+TGG + Chr6:1687264-1687283 MsG0680030399.01.T01:CDS 45.0%
! AGCTTAATGCATTTGGTGGC+AGG + Chr6:1688984-1689003 MsG0680030399.01.T01:intron 45.0%
! ATCTGAAATGGCCAATTGGG+TGG + Chr6:1682878-1682897 MsG0680030399.01.T01:intron 45.0%
! GGCTGCTAACCAATTCCTTT+TGG + Chr6:1683338-1683357 MsG0680030399.01.T01:intron 45.0%
! GTTCCCTACCCTTTTTCTCT+TGG - Chr6:1683935-1683954 None:intergenic 45.0%
! TGACGGACCAAACTGATGAA+CGG - Chr6:1686384-1686403 None:intergenic 45.0%
!! CCGTGATTGATTCGTAAGGT+TGG - Chr6:1687310-1687329 None:intergenic 45.0%
!! GACGAACATTAGTCTTGGCA+AGG + Chr6:1686075-1686094 MsG0680030399.01.T01:five_prime_UTR 45.0%
!! GCAAGTTTGTTGTTGCTGCA+GGG + Chr6:1682615-1682634 MsG0680030399.01.T01:intron 45.0%
!! GGTTTCCCTAGTGGATTGAT+TGG + Chr6:1686450-1686469 MsG0680030399.01.T01:intron 45.0%
!! TTCATCCCTTCTTTTGGGTG+AGG + Chr6:1686156-1686175 MsG0680030399.01.T01:CDS 45.0%
!! TTTGTTGTTGCTGCAGGGTA+CGG + Chr6:1682620-1682639 MsG0680030399.01.T01:intron 45.0%
!! TTTTCTCTTGGTGACCCACA+TGG - Chr6:1683923-1683942 None:intergenic 45.0%
!!! TTTTTTGTTGGGTGAGGGGT+TGG + Chr6:1689534-1689553 MsG0680030399.01.T01:three_prime_UTR 45.0%
!! TAAATAAATAGTATAATATT+TGG + Chr6:1688584-1688603 MsG0680030399.01.T01:intron 5.0%
!!! AATAAAATTCATATATTTTA+AGG - Chr6:1682845-1682864 None:intergenic 5.0%
!!! TTATTTTTATTTTTTTTGTT+GGG + Chr6:1689523-1689542 MsG0680030399.01.T01:three_prime_UTR 5.0%
!!! TTTATTTTTATTTTTTTTGT+TGG + Chr6:1689522-1689541 MsG0680030399.01.T01:three_prime_UTR 5.0%
AACCGGAACATAAGGCCATG+TGG + Chr6:1683905-1683924 MsG0680030399.01.T01:intron 50.0%
AATGCCACTCCCCCAACTAT+AGG - Chr6:1686910-1686929 None:intergenic 50.0%
AATGTATGAGCCACGGCAAG+TGG - Chr6:1686043-1686062 None:intergenic 50.0%
ACCGGAACATAAGGCCATGT+GGG + Chr6:1683906-1683925 MsG0680030399.01.T01:intron 50.0%
ACGACACTGAAACGTCGACA+AGG - Chr6:1680349-1680368 None:intergenic 50.0%
ACTTGCCGTGGCTCATACAT+TGG + Chr6:1686042-1686061 MsG0680030399.01.T01:five_prime_UTR 50.0%
CCAATGAAGCAAAGCCGAAC+TGG - Chr6:1685824-1685843 None:intergenic 50.0%
CCAGTTCGGCTTTGCTTCAT+TGG + Chr6:1685821-1685840 MsG0680030399.01.T01:intron 50.0%
CTGAGGCACAGAGTGATGAA+GGG + Chr6:1679678-1679697 MsG0680030399.01.T01:five_prime_UTR 50.0%
CTTGCCGTGGCTCATACATT+GGG + Chr6:1686043-1686062 MsG0680030399.01.T01:five_prime_UTR 50.0%
GAGTGAGTGAGAGATTACCG+TGG + Chr6:1682994-1683013 MsG0680030399.01.T01:intron 50.0%
GCTTCCTTTGTCTTTGGCAC+TGG - Chr6:1689407-1689426 None:intergenic 50.0%
GTCCCCACGAAAGCAAAACA+AGG + Chr6:1687684-1687703 MsG0680030399.01.T01:intron 50.0%
TATAGTTGGGGGAGTGGCAT+TGG + Chr6:1686909-1686928 MsG0680030399.01.T01:intron 50.0%
TCACCTGTGACACACTCAGT+CGG + Chr6:1689033-1689052 MsG0680030399.01.T01:CDS 50.0%
TCCTTCGTACCTGCAATCTG+CGG + Chr6:1687546-1687565 MsG0680030399.01.T01:CDS 50.0%
TCTACCTATAGTTGGGGGAG+TGG + Chr6:1686903-1686922 MsG0680030399.01.T01:intron 50.0%
TGACACCGCCTCGTACATTT+AGG + Chr6:1686571-1686590 MsG0680030399.01.T01:intron 50.0%
TGACAGGTGAGACAGGAGTT+TGG - Chr6:1689107-1689126 None:intergenic 50.0%
TTCCCTCTGTTTGTCTCTGC+TGG - Chr6:1686517-1686536 None:intergenic 50.0%
TTGCCGTGGCTCATACATTG+GGG + Chr6:1686044-1686063 MsG0680030399.01.T01:five_prime_UTR 50.0%
TTTCCGACTGAGTGTGTCAC+AGG - Chr6:1689039-1689058 None:intergenic 50.0%
! CACGGGTATCTCGACTAGTT+AGG + Chr6:1685758-1685777 MsG0680030399.01.T01:intron 50.0%
! CACGTTGGCTGCTTGTGTAT+TGG + Chr6:1684045-1684064 MsG0680030399.01.T01:intron 50.0%
! GTGCCGACCTCCATGATAAA+AGG - Chr6:1688731-1688750 None:intergenic 50.0%
! TGCTGCTTCTTCTGTTCCTG+AGG + Chr6:1679661-1679680 MsG0680030399.01.T01:five_prime_UTR 50.0%
!! ACCCACATGGCCTTATGTTC+CGG - Chr6:1683910-1683929 None:intergenic 50.0%
!! ATTAGATTCTGGGGTGGGAG+TGG + Chr6:1680168-1680187 MsG0680030399.01.T01:intron 50.0%
!! CGCAAGTTTGTTGTTGCTGC+AGG + Chr6:1682614-1682633 MsG0680030399.01.T01:intron 50.0%
!! GACTTACCAAGGGCATTGAC+AGG - Chr6:1689123-1689142 None:intergenic 50.0%
ACCGCAGATTGCAGGTACGA+AGG - Chr6:1687550-1687569 None:intergenic 55.0%
ACCTCACCTGCTGGTATGCA+TGG - Chr6:1687929-1687948 None:intergenic 55.0%
ACGGTACTATGCAGTCGGTG+AGG + Chr6:1683317-1683336 MsG0680030399.01.T01:intron 55.0%
AGATACCCGTGCTACAGCAC+GGG - Chr6:1685749-1685768 None:intergenic 55.0%
AGCAATCCTTCCACTTGCCG+TGG + Chr6:1686030-1686049 MsG0680030399.01.T01:five_prime_UTR 55.0%
CCTGAGGCACAGAGTGATGA+AGG + Chr6:1679677-1679696 MsG0680030399.01.T01:five_prime_UTR 55.0%
CCTTCATCACTCTGTGCCTC+AGG - Chr6:1679680-1679699 None:intergenic 55.0%
CGACGTTTCAGTGTCGTGTC+CGG + Chr6:1680352-1680371 MsG0680030399.01.T01:intron 55.0%
CTGCTTCCATGCATACCAGC+AGG + Chr6:1687920-1687939 MsG0680030399.01.T01:intron 55.0%
GAAATGGCCAATTGGGTGGC+TGG + Chr6:1682882-1682901 MsG0680030399.01.T01:intron 55.0%
GAGATACCCGTGCTACAGCA+CGG - Chr6:1685750-1685769 None:intergenic 55.0%
GTCTCACCTGTCAATGCCCT+TGG + Chr6:1689114-1689133 MsG0680030399.01.T01:CDS 55.0%
TATGAGCCACGGCAAGTGGA+AGG - Chr6:1686039-1686058 None:intergenic 55.0%
TCCATGCATACCAGCAGGTG+AGG + Chr6:1687925-1687944 MsG0680030399.01.T01:intron 55.0%
! TCTGGGGTGGGAGTGGAAAA+GGG + Chr6:1680175-1680194 MsG0680030399.01.T01:intron 55.0%
! TGGCTGGCGGCTTGAGTTTT+GGG + Chr6:1682898-1682917 MsG0680030399.01.T01:intron 55.0%
!! AGGGCATTGACAGGTGAGAC+AGG - Chr6:1689114-1689133 None:intergenic 55.0%
!! TTCTGGGGTGGGAGTGGAAA+AGG + Chr6:1680174-1680193 MsG0680030399.01.T01:intron 55.0%
ATGGCCAATTGGGTGGCTGG+CGG + Chr6:1682885-1682904 MsG0680030399.01.T01:intron 60.0%
CGTTTCAGTGTCGTGTCCGG+TGG + Chr6:1680355-1680374 MsG0680030399.01.T01:intron 60.0%
! GTGGCTGGCGGCTTGAGTTT+TGG + Chr6:1682897-1682916 MsG0680030399.01.T01:intron 60.0%
CAAGCCGCCAGCCACCCAAT+TGG - Chr6:1682892-1682911 None:intergenic 65.0%
CGCTACCCGTGCTGTAGCAC+GGG + Chr6:1685741-1685760 MsG0680030399.01.T01:intron 65.0%
GCGCTACCCGTGCTGTAGCA+CGG + Chr6:1685740-1685759 MsG0680030399.01.T01:intron 65.0%
GTGCTACAGCACGGGTAGCG+CGG - Chr6:1685741-1685760 None:intergenic 65.0%
TTCGCCGCGCTGTATGGCCG+CGG - Chr6:1685717-1685736 None:intergenic 70.0%
AGCCGAGACGCGACACGCGG+CGG + Chr6:1685689-1685708 MsG0680030399.01.T01:intron 75.0%
CGCAGCCGAGACGCGACACG+CGG + Chr6:1685686-1685705 MsG0680030399.01.T01:intron 75.0%
CGCGGCTTCGCCGCGCTGTA+TGG - Chr6:1685723-1685742 None:intergenic 75.0%
CTCCGCCGCGTGTCGCGTCT+CGG - Chr6:1685694-1685713 None:intergenic 75.0%
GGAGCCGCGGCCATACAGCG+CGG + Chr6:1685710-1685729 MsG0680030399.01.T01:intron 75.0%
! CGCGACACGCGGCGGAGCCG+CGG + Chr6:1685697-1685716 MsG0680030399.01.T01:intron 85.0%
Chromosome Type Strat End Strand Name
Chr6 gene 1679383 1689712 1679383 ID=MsG0680030399.01;Name=MsG0680030399.01
Chr6 mRNA 1679383 1689712 1679383 ID=MsG0680030399.01.T01;Parent=MsG0680030399.01;Name=MsG0680030399.01.T01;_AED=0.47;_eAED=0.50;_QI=627|0.28|0.62|1|0.57|0.62|8|282|169
Chr6 exon 1679383 1679830 1679383 ID=MsG0680030399.01.T01:exon:2663;Parent=MsG0680030399.01.T01
Chr6 exon 1681247 1681291 1681247 ID=MsG0680030399.01.T01:exon:2664;Parent=MsG0680030399.01.T01
Chr6 exon 1681715 1681743 1681715 ID=MsG0680030399.01.T01:exon:2665;Parent=MsG0680030399.01.T01
Chr6 exon 1686025 1686177 1686025 ID=MsG0680030399.01.T01:exon:2666;Parent=MsG0680030399.01.T01
Chr6 exon 1687237 1687365 1687237 ID=MsG0680030399.01.T01:exon:2667;Parent=MsG0680030399.01.T01
Chr6 exon 1687448 1687567 1687448 ID=MsG0680030399.01.T01:exon:2668;Parent=MsG0680030399.01.T01
Chr6 exon 1689006 1689135 1689006 ID=MsG0680030399.01.T01:exon:2669;Parent=MsG0680030399.01.T01
Chr6 exon 1689348 1689712 1689348 ID=MsG0680030399.01.T01:exon:2670;Parent=MsG0680030399.01.T01
Chr6 five_prime_UTR 1679383 1679830 1679383 ID=MsG0680030399.01.T01:five_prime_utr;Parent=MsG0680030399.01.T01
Chr6 five_prime_UTR 1681247 1681291 1681247 ID=MsG0680030399.01.T01:five_prime_utr;Parent=MsG0680030399.01.T01
Chr6 five_prime_UTR 1681715 1681743 1681715 ID=MsG0680030399.01.T01:five_prime_utr;Parent=MsG0680030399.01.T01
Chr6 five_prime_UTR 1686025 1686129 1686025 ID=MsG0680030399.01.T01:five_prime_utr;Parent=MsG0680030399.01.T01
Chr6 CDS 1686130 1686177 1686130 ID=MsG0680030399.01.T01:cds;Parent=MsG0680030399.01.T01
Chr6 CDS 1687237 1687365 1687237 ID=MsG0680030399.01.T01:cds;Parent=MsG0680030399.01.T01
Chr6 CDS 1687448 1687567 1687448 ID=MsG0680030399.01.T01:cds;Parent=MsG0680030399.01.T01
Chr6 CDS 1689006 1689135 1689006 ID=MsG0680030399.01.T01:cds;Parent=MsG0680030399.01.T01
Chr6 CDS 1689348 1689430 1689348 ID=MsG0680030399.01.T01:cds;Parent=MsG0680030399.01.T01
Chr6 three_prime_UTR 1689431 1689712 1689431 ID=MsG0680030399.01.T01:three_prime_utr;Parent=MsG0680030399.01.T01
Gene Sequence

>MsG0680030399.01.T01

ATGGAACCTTTCTTCACTGTTGTTCTTTCATCCCTTCTTTTGGGTGAGGTAAGATTGATTCTGGAGTTTAACATGTTCTCGTCTCCAAACAGGATTGGATTCAGCACTGCAATGGCTTCCAACCTTACGAATCAATCACGGAATGTTTTGAGCAAAAAACTAATGGCTAACGAAGAGGAAGCTTTGGACAATATCAATCTCTACTCAGTTATAACCATCATTTCATTTTTCCTGTTGGTACCATATGCTATATTTTCGGAGGGTGTCAAGTTTACTCCTTCGTACCTGCAATCTGCGGTTTCATATGGGATATTAGAGAAAGTGTCACCTGTGACACACTCAGTCGGAAATTGCGTTAAGCGTGTCGTTGTCATCGTCTCTTCAGTTATCTTTTTCCAAACTCCTGTCTCACCTGTCAATGCCCTTGGAACTGCTATTGCACTTGTTGGAGTTTTCTTGTATTCAAGGGCAAAGAGGATTAAGCCAGTGCCAAAGACAAAGGAAGCATAA

Protein sequence

>MsG0680030399.01.T01

MEPFFTVVLSSLLLGEVRLILEFNMFSSPNRIGFSTAMASNLTNQSRNVLSKKLMANEEEALDNINLYSVITIISFFLLVPYAIFSEGVKFTPSYLQSAVSYGILEKVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPVNALGTAIALVGVFLYSRAKRIKPVPKTKEA*