Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780036703.01.T01 | XP_003621585.1 | 98.402 | 438 | 7 | 0 | 1 | 438 | 1 | 438 | 0 | 894 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780036703.01.T01 | Q9LFV5 | 77.324 | 441 | 92 | 3 | 1 | 437 | 11 | 447 | 0 | 704 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780036703.01.T01 | A2Q633 | 98.402 | 438 | 7 | 0 | 1 | 438 | 1 | 438 | 0.0 | 894 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0180000220.01 | MsG0780036703.01 | 0.804507 | 2.089690e-49 | 1.079318e-46 |
MsG0180000235.01 | MsG0780036703.01 | 0.800549 | 1.368310e-48 | 6.389046e-46 |
MsG0180000475.01 | MsG0780036703.01 | 0.839208 | 1.818374e-57 | 2.493451e-54 |
MsG0180000555.01 | MsG0780036703.01 | 0.808542 | 2.942191e-50 | 1.686858e-47 |
MsG0180000585.01 | MsG0780036703.01 | 0.846149 | 2.604543e-59 | 4.440699e-56 |
MsG0180000741.01 | MsG0780036703.01 | 0.811117 | 8.219890e-51 | 5.045153e-48 |
MsG0180000797.01 | MsG0780036703.01 | 0.812296 | 4.554297e-51 | 2.884683e-48 |
MsG0180001911.01 | MsG0780036703.01 | 0.816168 | 6.353623e-52 | 4.469035e-49 |
MsG0180001922.01 | MsG0780036703.01 | 0.802584 | 5.234725e-49 | 2.573746e-46 |
MsG0180002071.01 | MsG0780036703.01 | 0.820275 | 7.473559e-53 | 5.886894e-50 |
MsG0180003190.01 | MsG0780036703.01 | 0.803632 | 3.177905e-49 | 1.604942e-46 |
MsG0180004005.01 | MsG0780036703.01 | 0.845523 | 3.852453e-59 | 6.437634e-56 |
MsG0180004372.01 | MsG0780036703.01 | 0.848132 | 7.446149e-60 | 1.352869e-56 |
MsG0180004388.01 | MsG0780036703.01 | 0.800431 | 1.445785e-48 | 6.730949e-46 |
MsG0180004598.01 | MsG0780036703.01 | 0.806613 | 7.555754e-50 | 4.119263e-47 |
MsG0180005228.01 | MsG0780036703.01 | 0.809813 | 1.571614e-50 | 9.319801e-48 |
MsG0180005813.01 | MsG0780036703.01 | 0.806136 | 9.525735e-50 | 5.130627e-47 |
MsG0180005842.01 | MsG0780036703.01 | 0.839385 | 1.635327e-57 | 2.254868e-54 |
MsG0180005878.01 | MsG0780036703.01 | 0.823521 | 1.324293e-53 | 1.142975e-50 |
MsG0180005944.01 | MsG0780036703.01 | 0.800693 | 1.278347e-48 | 5.990862e-46 |
MsG0180006016.01 | MsG0780036703.01 | 0.831598 | 1.524459e-55 | 1.662281e-52 |
MsG0180006128.01 | MsG0780036703.01 | 0.821611 | 3.683558e-53 | 3.011194e-50 |
MsG0280006356.01 | MsG0780036703.01 | 0.812874 | 3.404100e-51 | 2.189233e-48 |
MsG0280010614.01 | MsG0780036703.01 | 0.825516 | 4.492052e-54 | 4.103456e-51 |
MsG0280010816.01 | MsG0780036703.01 | 0.814996 | 1.159110e-51 | 7.895653e-49 |
MsG0280010976.01 | MsG0780036703.01 | 0.805151 | 1.533310e-49 | 8.052453e-47 |
MsG0280011293.01 | MsG0780036703.01 | 0.819928 | 8.976619e-53 | 7.003054e-50 |
MsG0280011446.01 | MsG0780036703.01 | 0.813996 | 1.929048e-51 | 1.278910e-48 |
MsG0380011729.01 | MsG0780036703.01 | 0.833927 | 4.025954e-56 | 4.705363e-53 |
MsG0380012020.01 | MsG0780036703.01 | 0.817591 | 3.045220e-52 | 2.226967e-49 |
MsG0380012124.01 | MsG0780036703.01 | 0.830536 | 2.778555e-55 | 2.935678e-52 |
MsG0380014162.01 | MsG0780036703.01 | -0.807954 | 3.926659e-50 | 2.216712e-47 |
MsG0380014365.01 | MsG0780036703.01 | 0.800618 | 1.324530e-48 | 6.195584e-46 |
MsG0380014488.01 | MsG0780036703.01 | 0.816206 | 6.231273e-52 | 4.387643e-49 |
MsG0680030841.01 | MsG0780036703.01 | 0.801440 | 8.995183e-49 | 4.295986e-46 |
MsG0680031061.01 | MsG0780036703.01 | 0.811950 | 5.416002e-51 | 3.398439e-48 |
MsG0680034067.01 | MsG0780036703.01 | 0.802720 | 4.907180e-49 | 2.421161e-46 |
MsG0680035573.01 | MsG0780036703.01 | 0.810791 | 9.669266e-51 | 5.883783e-48 |
MsG0480019289.01 | MsG0780036703.01 | 0.804949 | 1.689568e-49 | 8.827684e-47 |
MsG0480019816.01 | MsG0780036703.01 | 0.874552 | 6.178753e-68 | 2.792839e-64 |
MsG0480020445.01 | MsG0780036703.01 | 0.817442 | 3.291210e-52 | 2.397156e-49 |
MsG0480020591.01 | MsG0780036703.01 | 0.803836 | 2.882533e-49 | 1.463470e-46 |
MsG0480021134.01 | MsG0780036703.01 | 0.806875 | 6.651761e-50 | 3.651117e-47 |
MsG0480021240.01 | MsG0780036703.01 | 0.824655 | 7.177221e-54 | 6.397871e-51 |
MsG0480021409.01 | MsG0780036703.01 | 0.810457 | 1.141948e-50 | 6.886663e-48 |
MsG0480021900.01 | MsG0780036703.01 | 0.813556 | 2.410775e-51 | 1.579407e-48 |
MsG0480022318.01 | MsG0780036703.01 | 0.815482 | 9.038472e-52 | 6.239549e-49 |
MsG0480022467.01 | MsG0780036703.01 | 0.824456 | 7.994808e-54 | 7.084579e-51 |
MsG0480022480.01 | MsG0780036703.01 | 0.806424 | 8.281992e-50 | 4.493578e-47 |
MsG0480022551.01 | MsG0780036703.01 | 0.825612 | 4.263472e-54 | 3.905408e-51 |
MsG0480022786.01 | MsG0780036703.01 | 0.808932 | 2.429349e-50 | 1.407084e-47 |
MsG0480023224.01 | MsG0780036703.01 | 0.838786 | 2.338495e-57 | 3.165529e-54 |
MsG0480023245.01 | MsG0780036703.01 | 0.805600 | 1.234239e-49 | 6.556862e-47 |
MsG0480023412.01 | MsG0780036703.01 | 0.832143 | 1.118147e-55 | 1.238837e-52 |
MsG0480023427.01 | MsG0780036703.01 | 0.814252 | 1.693413e-51 | 1.130558e-48 |
MsG0480023554.01 | MsG0780036703.01 | 0.814888 | 1.225039e-51 | 8.319643e-49 |
MsG0480023873.01 | MsG0780036703.01 | 0.816260 | 6.059954e-52 | 4.273350e-49 |
MsG0580024114.01 | MsG0780036703.01 | 0.808950 | 2.406840e-50 | 1.394769e-47 |
MsG0580024205.01 | MsG0780036703.01 | 0.805395 | 1.362868e-49 | 7.202180e-47 |
MsG0580024353.01 | MsG0780036703.01 | 0.808919 | 2.444471e-50 | 1.415369e-47 |
MsG0580024418.01 | MsG0780036703.01 | 0.804064 | 2.584990e-49 | 1.320133e-46 |
MsG0580024682.01 | MsG0780036703.01 | 0.825920 | 3.602063e-54 | 3.328772e-51 |
MsG0580024733.01 | MsG0780036703.01 | 0.834208 | 3.423917e-56 | 4.034934e-53 |
MsG0580025009.01 | MsG0780036703.01 | 0.804299 | 2.309459e-49 | 1.186510e-46 |
MsG0580025184.01 | MsG0780036703.01 | 0.821187 | 4.612542e-53 | 3.726685e-50 |
MsG0580025907.01 | MsG0780036703.01 | 0.816458 | 5.473047e-52 | 3.879986e-49 |
MsG0580025989.01 | MsG0780036703.01 | 0.846484 | 2.110721e-59 | 3.638693e-56 |
MsG0380015181.01 | MsG0780036703.01 | 0.807036 | 6.149480e-50 | 3.389558e-47 |
MsG0380016227.01 | MsG0780036703.01 | 0.802770 | 4.791077e-49 | 2.366938e-46 |
MsG0380016397.01 | MsG0780036703.01 | 0.811468 | 6.896275e-51 | 4.272265e-48 |
MsG0380016752.01 | MsG0780036703.01 | 0.815439 | 9.238966e-52 | 6.370110e-49 |
MsG0380016859.01 | MsG0780036703.01 | 0.803550 | 3.304656e-49 | 1.665529e-46 |
MsG0380016971.01 | MsG0780036703.01 | 0.806831 | 6.796022e-50 | 3.726065e-47 |
MsG0380017232.01 | MsG0780036703.01 | 0.806814 | 6.851825e-50 | 3.755106e-47 |
MsG0380017375.01 | MsG0780036703.01 | 0.805612 | 1.227497e-49 | 6.523106e-47 |
MsG0380017403.01 | MsG0780036703.01 | 0.819286 | 1.258119e-52 | 9.640107e-50 |
MsG0480018369.01 | MsG0780036703.01 | 0.807371 | 5.222458e-50 | 2.903697e-47 |
MsG0580027129.01 | MsG0780036703.01 | 0.800422 | 1.452403e-48 | 6.760242e-46 |
MsG0580029594.01 | MsG0780036703.01 | 0.800551 | 1.366532e-48 | 6.381233e-46 |
MsG0580029629.01 | MsG0780036703.01 | 0.807610 | 4.646239e-50 | 2.599394e-47 |
MsG0580029639.01 | MsG0780036703.01 | 0.801319 | 9.521858e-49 | 4.533728e-46 |
MsG0580029658.01 | MsG0780036703.01 | 0.810841 | 9.432082e-51 | 5.747234e-48 |
MsG0580029762.01 | MsG0780036703.01 | 0.836228 | 1.058343e-56 | 1.325558e-53 |
MsG0580030235.01 | MsG0780036703.01 | 0.820046 | 8.433871e-53 | 6.601724e-50 |
MsG0680030684.01 | MsG0780036703.01 | 0.822287 | 2.568191e-53 | 2.140429e-50 |
MsG0680030685.01 | MsG0780036703.01 | 0.810569 | 1.080027e-50 | 6.532840e-48 |
MsG0280006462.01 | MsG0780036703.01 | 0.809997 | 1.434734e-50 | 8.549511e-48 |
MsG0280006595.01 | MsG0780036703.01 | 0.809138 | 2.194141e-50 | 1.278016e-47 |
MsG0280007048.01 | MsG0780036703.01 | 0.804701 | 1.903772e-49 | 9.882684e-47 |
MsG0280007071.01 | MsG0780036703.01 | 0.801166 | 1.023686e-48 | 4.855375e-46 |
MsG0280007087.01 | MsG0780036703.01 | 0.835507 | 1.611585e-56 | 1.974776e-53 |
MsG0280007564.01 | MsG0780036703.01 | 0.842307 | 2.800760e-58 | 4.229221e-55 |
MsG0280007585.01 | MsG0780036703.01 | 0.835876 | 1.299617e-56 | 1.610274e-53 |
MsG0280008039.01 | MsG0780036703.01 | 0.816987 | 4.165017e-52 | 2.996165e-49 |
MsG0280008502.01 | MsG0780036703.01 | 0.818448 | 1.949914e-52 | 1.460154e-49 |
MsG0280008907.01 | MsG0780036703.01 | 0.802105 | 6.568351e-49 | 3.190276e-46 |
MsG0280008970.01 | MsG0780036703.01 | 0.807079 | 6.022484e-50 | 3.323112e-47 |
MsG0280010389.01 | MsG0780036703.01 | 0.817541 | 3.125673e-52 | 2.282760e-49 |
MsG0280010416.01 | MsG0780036703.01 | 0.810808 | 9.587242e-51 | 5.836426e-48 |
MsG0280010447.01 | MsG0780036703.01 | 0.839797 | 1.277983e-57 | 1.784447e-54 |
MsG0280010531.01 | MsG0780036703.01 | 0.818883 | 1.553870e-52 | 1.177542e-49 |
MsG0780036548.01 | MsG0780036703.01 | 0.838295 | 3.131341e-57 | 4.175283e-54 |
MsG0780036703.01 | MsG0780037515.01 | 0.848153 | 7.350110e-60 | 1.336273e-56 |
MsG0780036703.01 | MsG0780037975.01 | 0.821391 | 4.138856e-53 | 3.362836e-50 |
MsG0780036703.01 | MsG0780038092.01 | 0.812671 | 3.770468e-51 | 2.412072e-48 |
MsG0780036703.01 | MsG0780039452.01 | 0.801750 | 7.770880e-49 | 3.740320e-46 |
MsG0780036703.01 | MsG0780039741.01 | 0.808589 | 2.875549e-50 | 1.650599e-47 |
MsG0780036703.01 | MsG0780039777.01 | 0.810978 | 8.807862e-51 | 5.387013e-48 |
MsG0780036703.01 | MsG0780039900.01 | 0.812885 | 3.384691e-51 | 2.177494e-48 |
MsG0780036703.01 | MsG0780040442.01 | 0.826776 | 2.253680e-54 | 2.133905e-51 |
MsG0780036703.01 | MsG0780040488.01 | 0.815244 | 1.021010e-51 | 7.001519e-49 |
MsG0780036703.01 | MsG0780040691.01 | 0.820870 | 5.457902e-53 | 4.370901e-50 |
MsG0780036703.01 | MsG0780040712.01 | 0.804822 | 1.796245e-49 | 9.354325e-47 |
MsG0780036703.01 | MsG0780040947.01 | 0.801948 | 7.077658e-49 | 3.423842e-46 |
MsG0780036703.01 | MsG0780041370.01 | 0.806846 | 6.746217e-50 | 3.700295e-47 |
MsG0780036703.01 | MsG0780041399.01 | 0.819394 | 1.188613e-52 | 9.134965e-50 |
MsG0780036703.01 | MsG0780041469.01 | 0.808738 | 2.672820e-50 | 1.540138e-47 |
MsG0780036703.01 | MsG0780041498.01 | 0.807903 | 4.027242e-50 | 2.270262e-47 |
MsG0780036703.01 | MsG0780041754.01 | 0.834792 | 2.441916e-56 | 2.928401e-53 |
MsG0780036703.01 | MsG0880042329.01 | 0.801258 | 9.802899e-49 | 4.660287e-46 |
MsG0780036703.01 | MsG0880042792.01 | 0.807932 | 3.970508e-50 | 2.240039e-47 |
MsG0780036703.01 | MsG0880043116.01 | 0.800682 | 1.285172e-48 | 6.021131e-46 |
MsG0780036703.01 | MsG0880043804.01 | 0.842927 | 1.917584e-58 | 2.951845e-55 |
MsG0780036703.01 | MsG0880044546.01 | 0.814584 | 1.430121e-51 | 9.633973e-49 |
MsG0780036703.01 | MsG0880044917.01 | 0.811007 | 8.681819e-51 | 5.313987e-48 |
MsG0780036703.01 | MsG0880045106.01 | 0.814702 | 1.346579e-51 | 9.100070e-49 |
MsG0780036703.01 | MsG0880045429.01 | 0.812069 | 5.103617e-51 | 3.212666e-48 |
MsG0780036703.01 | MsG0880046047.01 | 0.804051 | 2.600322e-49 | 1.327504e-46 |
MsG0780036703.01 | MsG0880046329.01 | 0.812253 | 4.653378e-51 | 2.944106e-48 |
MsG0780036703.01 | MsG0880046643.01 | 0.800644 | 1.308181e-48 | 6.123216e-46 |
MsG0780036703.01 | MsG0880046733.01 | 0.823942 | 1.055648e-53 | 9.220195e-51 |
MsG0780036703.01 | MsG0880047019.01 | 0.802052 | 6.734937e-49 | 3.266843e-46 |
MsG0780036703.01 | MsG0880047497.01 | 0.850979 | 1.195741e-60 | 2.384388e-57 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780036703.01.T01 | MTR_7g017400 | 98.402 | 438 | 7 | 0 | 1 | 438 | 1 | 438 | 0.0 | 894 |
MsG0780036703.01.T01 | MTR_3g085160 | 31.176 | 340 | 210 | 13 | 90 | 416 | 42 | 370 | 2.36e-34 | 132 |
MsG0780036703.01.T01 | MTR_3g085160 | 31.176 | 340 | 210 | 13 | 90 | 416 | 111 | 439 | 8.23e-34 | 132 |
MsG0780036703.01.T01 | MTR_8g028250 | 31.014 | 345 | 199 | 14 | 97 | 413 | 43 | 376 | 7.84e-28 | 114 |
MsG0780036703.01.T01 | MTR_4g094748 | 28.042 | 378 | 240 | 10 | 90 | 437 | 55 | 430 | 1.82e-26 | 111 |
MsG0780036703.01.T01 | MTR_8g028220 | 27.824 | 363 | 219 | 15 | 72 | 413 | 31 | 371 | 1.08e-22 | 99.8 |
MsG0780036703.01.T01 | MTR_1g033280 | 29.831 | 295 | 175 | 11 | 90 | 366 | 24 | 304 | 8.35e-19 | 88.2 |
MsG0780036703.01.T01 | MTR_1g018140 | 25.490 | 357 | 236 | 9 | 82 | 414 | 5 | 355 | 2.41e-18 | 86.7 |
MsG0780036703.01.T01 | MTR_1g033310 | 26.176 | 340 | 215 | 14 | 83 | 411 | 6 | 320 | 5.16e-18 | 85.5 |
MsG0780036703.01.T01 | MTR_4g011090 | 20.833 | 360 | 239 | 14 | 94 | 419 | 1 | 348 | 7.99e-12 | 67.0 |
MsG0780036703.01.T01 | MTR_2g033410 | 21.711 | 304 | 205 | 8 | 96 | 375 | 7 | 301 | 9.25e-12 | 66.6 |
MsG0780036703.01.T01 | MTR_1g014700 | 30.405 | 148 | 94 | 3 | 98 | 241 | 22 | 164 | 4.01e-11 | 65.1 |
MsG0780036703.01.T01 | MTR_3g007330 | 27.219 | 169 | 112 | 6 | 70 | 231 | 18 | 182 | 4.74e-11 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780036703.01.T01 | AT5G15710 | 77.324 | 441 | 92 | 3 | 1 | 437 | 11 | 447 | 0.0 | 704 |
MsG0780036703.01.T01 | AT5G15710 | 77.324 | 441 | 92 | 3 | 1 | 437 | 11 | 447 | 0.0 | 704 |
MsG0780036703.01.T01 | AT1G30950 | 28.895 | 353 | 221 | 9 | 90 | 414 | 42 | 392 | 8.08e-33 | 129 |
MsG0780036703.01.T01 | AT1G27340 | 28.866 | 291 | 184 | 10 | 89 | 367 | 111 | 390 | 1.01e-28 | 118 |
MsG0780036703.01.T01 | AT3G61590 | 28.375 | 363 | 195 | 19 | 96 | 413 | 41 | 383 | 5.78e-23 | 100 |
MsG0780036703.01.T01 | AT3G61590 | 28.375 | 363 | 195 | 19 | 96 | 413 | 49 | 391 | 6.41e-23 | 100 |
MsG0780036703.01.T01 | AT3G61590 | 28.375 | 363 | 195 | 19 | 96 | 413 | 49 | 391 | 6.41e-23 | 100 |
MsG0780036703.01.T01 | AT3G61590 | 28.375 | 363 | 195 | 19 | 96 | 413 | 77 | 419 | 1.62e-22 | 99.8 |
MsG0780036703.01.T01 | AT5G43190 | 27.684 | 354 | 221 | 13 | 83 | 414 | 36 | 376 | 8.84e-16 | 79.3 |
MsG0780036703.01.T01 | AT5G49610 | 22.654 | 309 | 206 | 10 | 90 | 375 | 1 | 299 | 7.50e-11 | 63.9 |
Find 99 sgRNAs with CRISPR-Local
Find 121 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATAGGGAAATCTTCTGAATT+AGG | 0.184813 | 7:-12168158 | MsG0780036703.01.T01:CDS |
CTCTGCAGAGTATAAGAATT+TGG | 0.204348 | 7:-12167137 | MsG0780036703.01.T01:CDS |
TTGGATGGTTATTTGGTTGC+TGG | 0.283294 | 7:-12167207 | MsG0780036703.01.T01:CDS |
ATCTGGTTGGTTGGGTCATC+TGG | 0.297316 | 7:-12167621 | MsG0780036703.01.T01:CDS |
ATCGTTGTTGGATGGTTATT+TGG | 0.311690 | 7:-12167214 | MsG0780036703.01.T01:CDS |
AGATGGCGTATTGTGATTCT+AGG | 0.329166 | 7:-12167326 | MsG0780036703.01.T01:CDS |
GAGATGGAATTCATTGCTTC+AGG | 0.336339 | 7:-12167799 | MsG0780036703.01.T01:CDS |
GCTGAGAGATTTGAATGCTT+TGG | 0.340080 | 7:-12167033 | MsG0780036703.01.T01:CDS |
CAATCTTTGTTCTTCAAAGA+TGG | 0.350971 | 7:-12167343 | MsG0780036703.01.T01:CDS |
TCAACAAAGGCAACTGATAA+TGG | 0.351016 | 7:-12167496 | MsG0780036703.01.T01:CDS |
GCTTCTCCTCCAAGGGGAAA+TGG | 0.361590 | 7:-12168065 | MsG0780036703.01.T01:CDS |
TAAGTTCCCGCGATCGTTGT+TGG | 0.370383 | 7:-12167226 | MsG0780036703.01.T01:CDS |
TTAGAGAAAATGGATTGTAT+AGG | 0.382196 | 7:-12168176 | None:intergenic |
AACGATCGCGGGAACTTAGC+TGG | 0.392059 | 7:+12167231 | None:intergenic |
ATGACTCAAAGGAAGATAAA+TGG | 0.392122 | 7:-12167392 | MsG0780036703.01.T01:CDS |
CTTGATCCATTTCCCCTTGG+AGG | 0.397956 | 7:+12168059 | None:intergenic |
CATTGGGCGATCTGGTTGGT+TGG | 0.400587 | 7:-12167630 | MsG0780036703.01.T01:CDS |
TAGAGAAAATGGATTGTATA+GGG | 0.406016 | 7:-12168175 | None:intergenic |
CATCTTTGAAGAACAAAGAT+TGG | 0.407762 | 7:+12167344 | None:intergenic |
TCTGCAGAGTATAAGAATTT+GGG | 0.413504 | 7:-12167136 | MsG0780036703.01.T01:CDS |
TGTTGATTAAAATGCATACT+TGG | 0.416796 | 7:+12167513 | None:intergenic |
ATTGGGCGATCTGGTTGGTT+GGG | 0.420582 | 7:-12167629 | MsG0780036703.01.T01:CDS |
TGTTTCACGTCTTATAATCA+AGG | 0.424630 | 7:-12166994 | MsG0780036703.01.T01:CDS |
GACTATAAACAGAACATTGC+GGG | 0.426071 | 7:+12167697 | None:intergenic |
GATCTCCACCCACGAAATCT+TGG | 0.429451 | 7:+12167101 | None:intergenic |
TAGGGAAATCTTCTGAATTA+GGG | 0.432644 | 7:-12168157 | MsG0780036703.01.T01:CDS |
GAGTATAAGAATTTGGGAAT+TGG | 0.434419 | 7:-12167130 | MsG0780036703.01.T01:CDS |
GAAGAAACACATGCTACATT+TGG | 0.435966 | 7:-12167948 | MsG0780036703.01.T01:CDS |
TTCAGATGGAGGATAACATA+TGG | 0.436237 | 7:-12167905 | MsG0780036703.01.T01:CDS |
TTCCTCCATGTTTGTGTGAG+GGG | 0.438416 | 7:+12167540 | None:intergenic |
TTGTGATTCTAGGTTGTACT+TGG | 0.439967 | 7:-12167316 | MsG0780036703.01.T01:CDS |
TTGGAAACCCTTTCACCGCT+TGG | 0.446761 | 7:-12167297 | MsG0780036703.01.T01:CDS |
GTCACTACATATATCATTAG+TGG | 0.448781 | 7:+12167437 | None:intergenic |
TTCCTTGATCCATTTCCCCT+TGG | 0.464201 | 7:+12168056 | None:intergenic |
CATTCGAGTGTTCCATCACA+TGG | 0.466899 | 7:-12167756 | MsG0780036703.01.T01:CDS |
CAATGGGTCGCGTCGGGTCG+AGG | 0.468949 | 7:-12168025 | MsG0780036703.01.T01:CDS |
GTTTCTTCATCTAAACCCCT+TGG | 0.480699 | 7:+12167963 | None:intergenic |
TACGAGTCCTTCAAGGCAAA+AGG | 0.487074 | 7:-12168000 | MsG0780036703.01.T01:CDS |
ATAGTCTGCCTCTTAAAACT+TGG | 0.488276 | 7:-12167680 | MsG0780036703.01.T01:CDS |
TACTCTGCAGAGTGCTGTAA+AGG | 0.489570 | 7:+12167148 | None:intergenic |
CATCAAACCAAGCGGTGAAA+GGG | 0.490008 | 7:+12167290 | None:intergenic |
TTCGTTCGGTTTGTAAGAGA+TGG | 0.495825 | 7:-12167815 | MsG0780036703.01.T01:CDS |
AAATCTTCTGAATTAGGGTC+TGG | 0.498237 | 7:-12168152 | MsG0780036703.01.T01:CDS |
CTAGTCCAATGGGTCGCGTC+GGG | 0.499895 | 7:-12168031 | MsG0780036703.01.T01:CDS |
TCATCAAACCAAGCGGTGAA+AGG | 0.503280 | 7:+12167289 | None:intergenic |
TGGATCATGCCAAGATTTCG+TGG | 0.511613 | 7:-12167110 | MsG0780036703.01.T01:CDS |
CAGACTAGATATAAATCGTT+GGG | 0.512905 | 7:-12167262 | MsG0780036703.01.T01:CDS |
AAGATCTGGTCTTGGATTGG+TGG | 0.513036 | 7:-12166943 | MsG0780036703.01.T01:CDS |
ATCTCATGCAACAAATCCTC+AGG | 0.513038 | 7:+12167873 | None:intergenic |
TTTCCTCCATGTTTGTGTGA+GGG | 0.518881 | 7:+12167539 | None:intergenic |
TTCCCGCGATCGTTGTTGGA+TGG | 0.520784 | 7:-12167222 | MsG0780036703.01.T01:CDS |
TCAAGGAATACTAGTCCAAT+GGG | 0.522157 | 7:-12168041 | MsG0780036703.01.T01:CDS |
TTTGAGTCATAAATTTCAGT+TGG | 0.522803 | 7:+12167405 | None:intergenic |
CTCGACCCGACGCGACCCAT+TGG | 0.525522 | 7:+12168026 | None:intergenic |
CGAGGAATACGAGTCCTTCA+AGG | 0.527204 | 7:-12168007 | MsG0780036703.01.T01:CDS |
CTCCAAGGGGAAATGGATCA+AGG | 0.529388 | 7:-12168058 | MsG0780036703.01.T01:CDS |
ACGTCTTATAATCAAGGGAA+AGG | 0.534116 | 7:-12166988 | MsG0780036703.01.T01:CDS |
TTAGGGTCTGGTGTTAGTAT+TGG | 0.537645 | 7:-12168140 | MsG0780036703.01.T01:CDS |
ATTTCCTCCATGTTTGTGTG+AGG | 0.542612 | 7:+12167538 | None:intergenic |
GATAATGGTTGTTGATCGAT+CGG | 0.546867 | 7:-12167481 | MsG0780036703.01.T01:CDS |
AAGCTTGTTTCTATGAGCCA+AGG | 0.550821 | 7:-12166894 | MsG0780036703.01.T01:CDS |
TCAGATGGAGGATAACATAT+GGG | 0.551921 | 7:-12167904 | MsG0780036703.01.T01:CDS |
GTATACAAGCTTCTCCTCCA+AGG | 0.552869 | 7:-12168073 | MsG0780036703.01.T01:CDS |
GTTTCACGTCTTATAATCAA+GGG | 0.552980 | 7:-12166993 | MsG0780036703.01.T01:CDS |
AGATCTGGTCTTGGATTGGT+GGG | 0.553005 | 7:-12166942 | MsG0780036703.01.T01:CDS |
AACTGAAATTTATGACTCAA+AGG | 0.554603 | 7:-12167403 | MsG0780036703.01.T01:CDS |
TGGTTGGTTGGGTCATCTGG+TGG | 0.556014 | 7:-12167618 | MsG0780036703.01.T01:CDS |
ACAGACTAGATATAAATCGT+TGG | 0.556572 | 7:-12167263 | MsG0780036703.01.T01:CDS |
AACCATCCAACAACGATCGC+GGG | 0.557271 | 7:+12167220 | None:intergenic |
TGGAAGCCGGCATAGTCTGA+TGG | 0.561952 | 7:+12167364 | None:intergenic |
ATCAAGGAATACTAGTCCAA+TGG | 0.562043 | 7:-12168042 | MsG0780036703.01.T01:CDS |
TATACAAGCTTCTCCTCCAA+GGG | 0.568208 | 7:-12168072 | MsG0780036703.01.T01:CDS |
ACTAGTCCAATGGGTCGCGT+CGG | 0.570903 | 7:-12168032 | MsG0780036703.01.T01:CDS |
GCCGCATTGGGCGATCTGGT+TGG | 0.576513 | 7:-12167634 | MsG0780036703.01.T01:CDS |
GAAGAACAAAGATTGGAAGC+CGG | 0.577778 | 7:+12167351 | None:intergenic |
GGTTGTTAAGACTAAACCAA+GGG | 0.578010 | 7:-12167979 | MsG0780036703.01.T01:CDS |
TAACCATCCAACAACGATCG+CGG | 0.584243 | 7:+12167219 | None:intergenic |
GTCGGTCCATCAGACTATGC+CGG | 0.584917 | 7:-12167370 | MsG0780036703.01.T01:CDS |
TAGATAGAAGCATCAAACCT+TGG | 0.596404 | 7:+12166877 | None:intergenic |
TGGTTGCTGGTACCCAGAAG+CGG | 0.597155 | 7:-12167194 | MsG0780036703.01.T01:CDS |
AGTTCATGCTGATATTCAGA+TGG | 0.607798 | 7:-12167919 | MsG0780036703.01.T01:CDS |
AGAACACAAGGTCCATGTGA+TGG | 0.607818 | 7:+12167744 | None:intergenic |
GGATCATGCCAAGATTTCGT+GGG | 0.616043 | 7:-12167109 | MsG0780036703.01.T01:CDS |
TCATGCCAAGATTTCGTGGG+TGG | 0.622823 | 7:-12167106 | MsG0780036703.01.T01:CDS |
GTAATCCCCTCACACAAACA+TGG | 0.632072 | 7:-12167545 | MsG0780036703.01.T01:CDS |
TCATGCTGATATTCAGATGG+AGG | 0.638526 | 7:-12167916 | MsG0780036703.01.T01:CDS |
CTCAAAGGAAGATAAATGGT+CGG | 0.644756 | 7:-12167388 | MsG0780036703.01.T01:CDS |
TTACAGAAACTAAGAACACA+AGG | 0.666240 | 7:+12167732 | None:intergenic |
CATATGGGCTATGTTGCCTG+AGG | 0.667267 | 7:-12167889 | MsG0780036703.01.T01:CDS |
AGGTTGTTAAGACTAAACCA+AGG | 0.680360 | 7:-12167980 | MsG0780036703.01.T01:CDS |
ACCAACCAGATCGCCCAATG+CGG | 0.690988 | 7:+12167633 | None:intergenic |
CTGTACATCATCAAACCAAG+CGG | 0.701884 | 7:+12167282 | None:intergenic |
GTTGTTAAGACTAAACCAAG+GGG | 0.704700 | 7:-12167978 | MsG0780036703.01.T01:CDS |
AATAACGAACGAAAATACCT+CGG | 0.706321 | 7:+12167066 | None:intergenic |
AGACTATAAACAGAACATTG+CGG | 0.711279 | 7:+12167696 | None:intergenic |
ATACAAGCTTCTCCTCCAAG+GGG | 0.713925 | 7:-12168071 | MsG0780036703.01.T01:CDS |
AGATCAGTAGAATGCCGCCG+AGG | 0.728374 | 7:-12167083 | MsG0780036703.01.T01:CDS |
AACGAACGAAAATACCTCGG+CGG | 0.730785 | 7:+12167069 | None:intergenic |
ATCCCCTCACACAAACATGG+AGG | 0.738910 | 7:-12167542 | MsG0780036703.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTATCAACATCAAATAGA+AGG | + | Chr7:12168078-12168097 | None:intergenic | 20.0% |
! | AACTGAAATTTATGACTCAA+AGG | - | Chr7:12167637-12167656 | MsG0780036703.01.T01:CDS | 25.0% |
! | TTTGAGTCATAAATTTCAGT+TGG | + | Chr7:12167638-12167657 | None:intergenic | 25.0% |
!! | TGTTGATTAAAATGCATACT+TGG | + | Chr7:12167530-12167549 | None:intergenic | 25.0% |
!! | TTGATGTTGATAAAAAGATC+TGG | - | Chr7:12168083-12168102 | MsG0780036703.01.T01:CDS | 25.0% |
!!! | ATTCTATACCAAGTTTTAAG+AGG | + | Chr7:12167371-12167390 | None:intergenic | 25.0% |
!!! | GTATGCATTTTAATCAACAA+AGG | - | Chr7:12167531-12167550 | MsG0780036703.01.T01:CDS | 25.0% |
AATAACGAACGAAAATACCT+CGG | + | Chr7:12167977-12167996 | None:intergenic | 30.0% | |
ACAGACTAGATATAAATCGT+TGG | - | Chr7:12167777-12167796 | MsG0780036703.01.T01:CDS | 30.0% | |
AGACTATAAACAGAACATTG+CGG | + | Chr7:12167347-12167366 | None:intergenic | 30.0% | |
ATAGGGAAATCTTCTGAATT+AGG | - | Chr7:12166882-12166901 | MsG0780036703.01.T01:CDS | 30.0% | |
ATGACTCAAAGGAAGATAAA+TGG | - | Chr7:12167648-12167667 | MsG0780036703.01.T01:CDS | 30.0% | |
CAATCTTTGTTCTTCAAAGA+TGG | - | Chr7:12167697-12167716 | MsG0780036703.01.T01:CDS | 30.0% | |
CAGACTAGATATAAATCGTT+GGG | - | Chr7:12167778-12167797 | MsG0780036703.01.T01:CDS | 30.0% | |
GAGTATAAGAATTTGGGAAT+TGG | - | Chr7:12167910-12167929 | MsG0780036703.01.T01:CDS | 30.0% | |
GTCACTACATATATCATTAG+TGG | + | Chr7:12167606-12167625 | None:intergenic | 30.0% | |
GTTTCACGTCTTATAATCAA+GGG | - | Chr7:12168047-12168066 | MsG0780036703.01.T01:CDS | 30.0% | |
TAGGGAAATCTTCTGAATTA+GGG | - | Chr7:12166883-12166902 | MsG0780036703.01.T01:CDS | 30.0% | |
TCTGCAGAGTATAAGAATTT+GGG | - | Chr7:12167904-12167923 | MsG0780036703.01.T01:CDS | 30.0% | |
TGTTTCACGTCTTATAATCA+AGG | - | Chr7:12168046-12168065 | MsG0780036703.01.T01:CDS | 30.0% | |
TTACAGAAACTAAGAACACA+AGG | + | Chr7:12167311-12167330 | None:intergenic | 30.0% | |
TTGATAAAAAGATCTGGTCT+TGG | - | Chr7:12168089-12168108 | MsG0780036703.01.T01:CDS | 30.0% | |
! | CATCTTTGAAGAACAAAGAT+TGG | + | Chr7:12167699-12167718 | None:intergenic | 30.0% |
! | GCAGTAGAAAATGTAGTTTT+AGG | - | Chr7:12166927-12166946 | MsG0780036703.01.T01:CDS | 30.0% |
!!! | GTAGAAAATGTAGTTTTAGG+TGG | - | Chr7:12166930-12166949 | MsG0780036703.01.T01:CDS | 30.0% |
AAATCTTCTGAATTAGGGTC+TGG | - | Chr7:12166888-12166907 | MsG0780036703.01.T01:CDS | 35.0% | |
ACGTCTTATAATCAAGGGAA+AGG | - | Chr7:12168052-12168071 | MsG0780036703.01.T01:CDS | 35.0% | |
AGGTTGTTAAGACTAAACCA+AGG | - | Chr7:12167060-12167079 | MsG0780036703.01.T01:CDS | 35.0% | |
AGTTCATGCTGATATTCAGA+TGG | - | Chr7:12167121-12167140 | MsG0780036703.01.T01:CDS | 35.0% | |
ATAGTCTGCCTCTTAAAACT+TGG | - | Chr7:12167360-12167379 | MsG0780036703.01.T01:CDS | 35.0% | |
ATCAAGGAATACTAGTCCAA+TGG | - | Chr7:12166998-12167017 | MsG0780036703.01.T01:CDS | 35.0% | |
ATCGTTGTTGGATGGTTATT+TGG | - | Chr7:12167826-12167845 | MsG0780036703.01.T01:CDS | 35.0% | |
CGAAGCCGAAAAATTAGAAA+CGG | + | Chr7:12167209-12167228 | None:intergenic | 35.0% | |
CTCAAAGGAAGATAAATGGT+CGG | - | Chr7:12167652-12167671 | MsG0780036703.01.T01:CDS | 35.0% | |
CTCTGCAGAGTATAAGAATT+TGG | - | Chr7:12167903-12167922 | MsG0780036703.01.T01:CDS | 35.0% | |
GAAGAAACACATGCTACATT+TGG | - | Chr7:12167092-12167111 | MsG0780036703.01.T01:CDS | 35.0% | |
GACTATAAACAGAACATTGC+GGG | + | Chr7:12167346-12167365 | None:intergenic | 35.0% | |
GGTTGTTAAGACTAAACCAA+GGG | - | Chr7:12167061-12167080 | MsG0780036703.01.T01:CDS | 35.0% | |
GTTGTTAAGACTAAACCAAG+GGG | - | Chr7:12167062-12167081 | MsG0780036703.01.T01:CDS | 35.0% | |
TCAACAAAGGCAACTGATAA+TGG | - | Chr7:12167544-12167563 | MsG0780036703.01.T01:CDS | 35.0% | |
TCAAGGAATACTAGTCCAAT+GGG | - | Chr7:12166999-12167018 | MsG0780036703.01.T01:CDS | 35.0% | |
TCAGATGGAGGATAACATAT+GGG | - | Chr7:12167136-12167155 | MsG0780036703.01.T01:CDS | 35.0% | |
TTCAGATGGAGGATAACATA+TGG | - | Chr7:12167135-12167154 | MsG0780036703.01.T01:CDS | 35.0% | |
TTGTGATTCTAGGTTGTACT+TGG | - | Chr7:12167724-12167743 | MsG0780036703.01.T01:CDS | 35.0% | |
! | CTTTTTCTTGTTGGAAGGAT+TGG | - | Chr7:12167869-12167888 | MsG0780036703.01.T01:CDS | 35.0% |
! | GATAATGGTTGTTGATCGAT+CGG | - | Chr7:12167559-12167578 | MsG0780036703.01.T01:CDS | 35.0% |
! | TTAACAACCTTTTGCCTTGA+AGG | + | Chr7:12167050-12167069 | None:intergenic | 35.0% |
! | TTCCGCCGTTTCTAATTTTT+CGG | - | Chr7:12167201-12167220 | MsG0780036703.01.T01:CDS | 35.0% |
! | TTTCACATTTTTGCCGCATT+GGG | - | Chr7:12167394-12167413 | MsG0780036703.01.T01:CDS | 35.0% |
!! | AAAAAGATCTGGTCTTGGAT+TGG | - | Chr7:12168094-12168113 | MsG0780036703.01.T01:CDS | 35.0% |
!! | TAGATAGAAGCATCAAACCT+TGG | + | Chr7:12168166-12168185 | None:intergenic | 35.0% |
!! | TCTAATTTTTCGGCTTCGTT+CGG | - | Chr7:12167211-12167230 | MsG0780036703.01.T01:CDS | 35.0% |
AACAAGAAAAAGCCGCTTCT+GGG | + | Chr7:12167861-12167880 | None:intergenic | 40.0% | |
AGATGGCGTATTGTGATTCT+AGG | - | Chr7:12167714-12167733 | MsG0780036703.01.T01:CDS | 40.0% | |
AGCCGAAAAATTAGAAACGG+CGG | + | Chr7:12167206-12167225 | None:intergenic | 40.0% | |
ATCTCATGCAACAAATCCTC+AGG | + | Chr7:12167170-12167189 | None:intergenic | 40.0% | |
ATTTCCTCCATGTTTGTGTG+AGG | + | Chr7:12167505-12167524 | None:intergenic | 40.0% | |
CTGTACATCATCAAACCAAG+CGG | + | Chr7:12167761-12167780 | None:intergenic | 40.0% | |
GAAGAACAAAGATTGGAAGC+CGG | + | Chr7:12167692-12167711 | None:intergenic | 40.0% | |
GAGATGGAATTCATTGCTTC+AGG | - | Chr7:12167241-12167260 | MsG0780036703.01.T01:CDS | 40.0% | |
GCTGAGAGATTTGAATGCTT+TGG | - | Chr7:12168007-12168026 | MsG0780036703.01.T01:CDS | 40.0% | |
GTTTCTTCATCTAAACCCCT+TGG | + | Chr7:12167080-12167099 | None:intergenic | 40.0% | |
TATACAAGCTTCTCCTCCAA+GGG | - | Chr7:12166968-12166987 | MsG0780036703.01.T01:CDS | 40.0% | |
TCATGCTGATATTCAGATGG+AGG | - | Chr7:12167124-12167143 | MsG0780036703.01.T01:CDS | 40.0% | |
TTGGATGGTTATTTGGTTGC+TGG | - | Chr7:12167833-12167852 | MsG0780036703.01.T01:CDS | 40.0% | |
TTTCCTCCATGTTTGTGTGA+GGG | + | Chr7:12167504-12167523 | None:intergenic | 40.0% | |
! | GTTTCACATTTTTGCCGCAT+TGG | - | Chr7:12167393-12167412 | MsG0780036703.01.T01:CDS | 40.0% |
! | TTAGGGTCTGGTGTTAGTAT+TGG | - | Chr7:12166900-12166919 | MsG0780036703.01.T01:CDS | 40.0% |
! | TTCGTTCGGTTTGTAAGAGA+TGG | - | Chr7:12167225-12167244 | MsG0780036703.01.T01:CDS | 40.0% |
!! | AAGCTTGTTTCTATGAGCCA+AGG | - | Chr7:12168146-12168165 | MsG0780036703.01.T01:CDS | 40.0% |
!!! | GTGGTCTTGTTTGCTTTTCT+GGG | - | Chr7:12167441-12167460 | MsG0780036703.01.T01:CDS | 40.0% |
AACGAACGAAAATACCTCGG+CGG | + | Chr7:12167974-12167993 | None:intergenic | 45.0% | |
AGAACACAAGGTCCATGTGA+TGG | + | Chr7:12167299-12167318 | None:intergenic | 45.0% | |
ATACAAGCTTCTCCTCCAAG+GGG | - | Chr7:12166969-12166988 | MsG0780036703.01.T01:CDS | 45.0% | |
CAACAAGAAAAAGCCGCTTC+TGG | + | Chr7:12167862-12167881 | None:intergenic | 45.0% | |
CATCAAACCAAGCGGTGAAA+GGG | + | Chr7:12167753-12167772 | None:intergenic | 45.0% | |
CATTCGAGTGTTCCATCACA+TGG | - | Chr7:12167284-12167303 | MsG0780036703.01.T01:CDS | 45.0% | |
GGATCATGCCAAGATTTCGT+GGG | - | Chr7:12167931-12167950 | MsG0780036703.01.T01:CDS | 45.0% | |
GTAATCCCCTCACACAAACA+TGG | - | Chr7:12167495-12167514 | MsG0780036703.01.T01:CDS | 45.0% | |
GTATACAAGCTTCTCCTCCA+AGG | - | Chr7:12166967-12166986 | MsG0780036703.01.T01:CDS | 45.0% | |
TAACCATCCAACAACGATCG+CGG | + | Chr7:12167824-12167843 | None:intergenic | 45.0% | |
TACGAGTCCTTCAAGGCAAA+AGG | - | Chr7:12167040-12167059 | MsG0780036703.01.T01:CDS | 45.0% | |
TCATCAAACCAAGCGGTGAA+AGG | + | Chr7:12167754-12167773 | None:intergenic | 45.0% | |
TGGATCATGCCAAGATTTCG+TGG | - | Chr7:12167930-12167949 | MsG0780036703.01.T01:CDS | 45.0% | |
TTCCTCCATGTTTGTGTGAG+GGG | + | Chr7:12167503-12167522 | None:intergenic | 45.0% | |
TTCCTTGATCCATTTCCCCT+TGG | + | Chr7:12166987-12167006 | None:intergenic | 45.0% | |
!! | AAGATCTGGTCTTGGATTGG+TGG | - | Chr7:12168097-12168116 | MsG0780036703.01.T01:CDS | 45.0% |
!! | AGATCTGGTCTTGGATTGGT+GGG | - | Chr7:12168098-12168117 | MsG0780036703.01.T01:CDS | 45.0% |
!! | AGCGGCTTTTTCTTGTTGGA+AGG | - | Chr7:12167864-12167883 | MsG0780036703.01.T01:CDS | 45.0% |
!! | CAGAAGCGGCTTTTTCTTGT+TGG | - | Chr7:12167860-12167879 | MsG0780036703.01.T01:CDS | 45.0% |
!! | TACTCTGCAGAGTGCTGTAA+AGG | + | Chr7:12167895-12167914 | None:intergenic | 45.0% |
!!! | GGTGGTCTTGTTTGCTTTTC+TGG | - | Chr7:12167440-12167459 | MsG0780036703.01.T01:CDS | 45.0% |
AACCATCCAACAACGATCGC+GGG | + | Chr7:12167823-12167842 | None:intergenic | 50.0% | |
ATCCCCTCACACAAACATGG+AGG | - | Chr7:12167498-12167517 | MsG0780036703.01.T01:CDS | 50.0% | |
CGAGGAATACGAGTCCTTCA+AGG | - | Chr7:12167033-12167052 | MsG0780036703.01.T01:CDS | 50.0% | |
CTCCAAGGGGAAATGGATCA+AGG | - | Chr7:12166982-12167001 | MsG0780036703.01.T01:CDS | 50.0% | |
CTTGATCCATTTCCCCTTGG+AGG | + | Chr7:12166984-12167003 | None:intergenic | 50.0% | |
GATCTCCACCCACGAAATCT+TGG | + | Chr7:12167942-12167961 | None:intergenic | 50.0% | |
TAAGTTCCCGCGATCGTTGT+TGG | - | Chr7:12167814-12167833 | MsG0780036703.01.T01:CDS | 50.0% | |
TCATGCCAAGATTTCGTGGG+TGG | - | Chr7:12167934-12167953 | MsG0780036703.01.T01:CDS | 50.0% | |
TTGGAAACCCTTTCACCGCT+TGG | - | Chr7:12167743-12167762 | MsG0780036703.01.T01:CDS | 50.0% | |
! | ATCTGGTTGGTTGGGTCATC+TGG | - | Chr7:12167419-12167438 | MsG0780036703.01.T01:CDS | 50.0% |
! | ATTGGGCGATCTGGTTGGTT+GGG | - | Chr7:12167411-12167430 | MsG0780036703.01.T01:CDS | 50.0% |
! | CATATGGGCTATGTTGCCTG+AGG | - | Chr7:12167151-12167170 | MsG0780036703.01.T01:CDS | 50.0% |
!! | GTTTGCTTTTCTGGGTGCGA+AGG | - | Chr7:12167449-12167468 | MsG0780036703.01.T01:CDS | 50.0% |
AACGATCGCGGGAACTTAGC+TGG | + | Chr7:12167812-12167831 | None:intergenic | 55.0% | |
ACCAACCAGATCGCCCAATG+CGG | + | Chr7:12167410-12167429 | None:intergenic | 55.0% | |
ACTAGTCCAATGGGTCGCGT+CGG | - | Chr7:12167008-12167027 | MsG0780036703.01.T01:CDS | 55.0% | |
AGATCAGTAGAATGCCGCCG+AGG | - | Chr7:12167957-12167976 | MsG0780036703.01.T01:CDS | 55.0% | |
CATTGGGCGATCTGGTTGGT+TGG | - | Chr7:12167410-12167429 | MsG0780036703.01.T01:CDS | 55.0% | |
GCTTCTCCTCCAAGGGGAAA+TGG | - | Chr7:12166975-12166994 | MsG0780036703.01.T01:CDS | 55.0% | |
GTCGGTCCATCAGACTATGC+CGG | - | Chr7:12167670-12167689 | MsG0780036703.01.T01:CDS | 55.0% | |
TGGAAGCCGGCATAGTCTGA+TGG | + | Chr7:12167679-12167698 | None:intergenic | 55.0% | |
TGGTTGCTGGTACCCAGAAG+CGG | - | Chr7:12167846-12167865 | MsG0780036703.01.T01:CDS | 55.0% | |
TTCCCGCGATCGTTGTTGGA+TGG | - | Chr7:12167818-12167837 | MsG0780036703.01.T01:CDS | 55.0% | |
! | TGGTTGGTTGGGTCATCTGG+TGG | - | Chr7:12167422-12167441 | MsG0780036703.01.T01:CDS | 55.0% |
! | TTTTGCCGCATTGGGCGATC+TGG | - | Chr7:12167402-12167421 | MsG0780036703.01.T01:CDS | 55.0% |
CTAGTCCAATGGGTCGCGTC+GGG | - | Chr7:12167009-12167028 | MsG0780036703.01.T01:CDS | 60.0% | |
GCCGCATTGGGCGATCTGGT+TGG | - | Chr7:12167406-12167425 | MsG0780036703.01.T01:CDS | 65.0% | |
CAATGGGTCGCGTCGGGTCG+AGG | - | Chr7:12167015-12167034 | MsG0780036703.01.T01:CDS | 70.0% | |
CTCGACCCGACGCGACCCAT+TGG | + | Chr7:12167017-12167036 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr7 | gene | 12166873 | 12168189 | 12166873 | ID=MsG0780036703.01;Name=MsG0780036703.01 |
Chr7 | mRNA | 12166873 | 12168189 | 12166873 | ID=MsG0780036703.01.T01;Parent=MsG0780036703.01;Name=MsG0780036703.01.T01;_AED=0.28;_eAED=0.28;_QI=0|-1|0|1|-1|1|1|0|438 |
Chr7 | exon | 12166873 | 12168189 | 12166873 | ID=MsG0780036703.01.T01:exon:2505;Parent=MsG0780036703.01.T01 |
Chr7 | CDS | 12166873 | 12168189 | 12166873 | ID=MsG0780036703.01.T01:cds;Parent=MsG0780036703.01.T01 |
Gene Sequence |
Protein sequence |