Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040141.01.T01 | BAM84273.1 | 94.096 | 271 | 16 | 0 | 7 | 277 | 80 | 350 | 1.08E-169 | 487 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040141.01.T01 | P52914 | 69.202 | 263 | 81 | 0 | 7 | 269 | 80 | 342 | 2.55E-120 | 354 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040141.01.T01 | M1VNS8 | 94.096 | 271 | 16 | 0 | 7 | 277 | 80 | 350 | 5.16e-170 | 487 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048059.01 | MsG0780040141.01 | 0.811624 | 6.378598e-51 | 3.967674e-48 |
| MsG0080048909.01 | MsG0780040141.01 | 0.805400 | 1.359478e-49 | 7.185454e-47 |
| MsG0080049062.01 | MsG0780040141.01 | 0.820089 | 8.245561e-53 | 6.462258e-50 |
| MsG0180000467.01 | MsG0780040141.01 | 0.815848 | 7.490009e-52 | 5.222063e-49 |
| MsG0180001827.01 | MsG0780040141.01 | 0.840909 | 6.544992e-58 | 9.460402e-55 |
| MsG0180003350.01 | MsG0780040141.01 | 0.817642 | 2.967110e-52 | 2.172847e-49 |
| MsG0180003351.01 | MsG0780040141.01 | 0.806707 | 7.217458e-50 | 3.944430e-47 |
| MsG0180003880.01 | MsG0780040141.01 | 0.809246 | 2.080198e-50 | 1.215155e-47 |
| MsG0180003985.01 | MsG0780040141.01 | 0.812740 | 3.641562e-51 | 2.333876e-48 |
| MsG0180004553.01 | MsG0780040141.01 | 0.828891 | 6.985617e-55 | 7.034847e-52 |
| MsG0180006159.01 | MsG0780040141.01 | 0.809096 | 2.239768e-50 | 1.303120e-47 |
| MsG0180006212.01 | MsG0780040141.01 | 0.801055 | 1.078654e-48 | 5.101990e-46 |
| MsG0280006451.01 | MsG0780040141.01 | 0.823646 | 1.238569e-53 | 1.072784e-50 |
| MsG0280006452.01 | MsG0780040141.01 | 0.801830 | 7.480481e-49 | 3.608120e-46 |
| MsG0280011276.01 | MsG0780040141.01 | 0.823189 | 1.583374e-53 | 1.353799e-50 |
| MsG0380012065.01 | MsG0780040141.01 | 0.813645 | 2.304271e-51 | 1.513285e-48 |
| MsG0380013114.01 | MsG0780040141.01 | 0.803887 | 2.812637e-49 | 1.429907e-46 |
| MsG0380013506.01 | MsG0780040141.01 | 0.829177 | 5.955647e-55 | 6.049279e-52 |
| MsG0380014795.01 | MsG0780040141.01 | 0.800936 | 1.140730e-48 | 5.379240e-46 |
| MsG0680030879.01 | MsG0780040141.01 | 0.800595 | 1.338861e-48 | 6.258869e-46 |
| MsG0680035368.01 | MsG0780040141.01 | 0.806776 | 6.978047e-50 | 3.820413e-47 |
| MsG0480019046.01 | MsG0780040141.01 | 0.808751 | 2.654668e-50 | 1.530318e-47 |
| MsG0480021039.01 | MsG0780040141.01 | 0.829595 | 4.713865e-55 | 4.846819e-52 |
| MsG0480021143.01 | MsG0780040141.01 | 0.801620 | 8.261142e-49 | 3.963289e-46 |
| MsG0480021205.01 | MsG0780040141.01 | 0.803768 | 2.978279e-49 | 1.509386e-46 |
| MsG0480021308.01 | MsG0780040141.01 | 0.812025 | 5.215963e-51 | 3.279505e-48 |
| MsG0480022411.01 | MsG0780040141.01 | 0.806387 | 8.432050e-50 | 4.570562e-47 |
| MsG0480022412.01 | MsG0780040141.01 | 0.813493 | 2.488848e-51 | 1.627861e-48 |
| MsG0480022626.01 | MsG0780040141.01 | 0.825691 | 4.081978e-54 | 3.747705e-51 |
| MsG0480022837.01 | MsG0780040141.01 | 0.821869 | 3.209509e-53 | 2.643166e-50 |
| MsG0480023211.01 | MsG0780040141.01 | 0.800565 | 1.357834e-48 | 6.342730e-46 |
| MsG0480023217.01 | MsG0780040141.01 | 0.824580 | 7.472954e-54 | 6.646971e-51 |
| MsG0480023319.01 | MsG0780040141.01 | 0.806328 | 8.677707e-50 | 4.696825e-47 |
| MsG0480023469.01 | MsG0780040141.01 | 0.812207 | 4.760563e-51 | 3.008193e-48 |
| MsG0480023482.01 | MsG0780040141.01 | 0.801727 | 7.854698e-49 | 3.778523e-46 |
| MsG0480023695.01 | MsG0780040141.01 | 0.823680 | 1.216071e-53 | 1.054371e-50 |
| MsG0480023818.01 | MsG0780040141.01 | 0.837623 | 4.659969e-57 | 6.088384e-54 |
| MsG0580024128.01 | MsG0780040141.01 | 0.811907 | 5.534241e-51 | 3.468435e-48 |
| MsG0580024278.01 | MsG0780040141.01 | 0.822483 | 2.312332e-53 | 1.937958e-50 |
| MsG0580024442.01 | MsG0780040141.01 | 0.824929 | 6.182903e-54 | 5.554934e-51 |
| MsG0580024875.01 | MsG0780040141.01 | 0.807163 | 5.779381e-50 | 3.196116e-47 |
| MsG0580025105.01 | MsG0780040141.01 | 0.815756 | 7.852248e-52 | 5.461523e-49 |
| MsG0580025259.01 | MsG0780040141.01 | 0.841530 | 4.494151e-58 | 6.622507e-55 |
| MsG0580025315.01 | MsG0780040141.01 | 0.811366 | 7.258381e-51 | 4.484300e-48 |
| MsG0580025392.01 | MsG0780040141.01 | 0.835394 | 1.721710e-56 | 2.102704e-53 |
| MsG0580025447.01 | MsG0780040141.01 | 0.812054 | 5.143093e-51 | 3.236107e-48 |
| MsG0380015200.01 | MsG0780040141.01 | 0.804191 | 2.431860e-49 | 1.245900e-46 |
| MsG0380015348.01 | MsG0780040141.01 | 0.802001 | 6.902395e-49 | 3.343581e-46 |
| MsG0380015417.01 | MsG0780040141.01 | 0.805713 | 1.168975e-49 | 6.228713e-47 |
| MsG0380015439.01 | MsG0780040141.01 | 0.811900 | 5.555254e-51 | 3.480908e-48 |
| MsG0380015719.01 | MsG0780040141.01 | 0.812771 | 3.584649e-51 | 2.299148e-48 |
| MsG0380015795.01 | MsG0780040141.01 | 0.838095 | 3.523761e-57 | 4.670316e-54 |
| MsG0380015974.01 | MsG0780040141.01 | 0.800017 | 1.755361e-48 | 8.086452e-46 |
| MsG0380016241.01 | MsG0780040141.01 | 0.802871 | 4.567491e-49 | 2.262199e-46 |
| MsG0380016354.01 | MsG0780040141.01 | 0.800142 | 1.656011e-48 | 7.653032e-46 |
| MsG0380016790.01 | MsG0780040141.01 | 0.818746 | 1.668634e-52 | 1.259698e-49 |
| MsG0380016889.01 | MsG0780040141.01 | 0.802606 | 5.179284e-49 | 2.547933e-46 |
| MsG0380017406.01 | MsG0780040141.01 | 0.803853 | 2.858766e-49 | 1.452055e-46 |
| MsG0380017895.01 | MsG0780040141.01 | 0.813251 | 2.813129e-51 | 1.827675e-48 |
| MsG0480018190.01 | MsG0780040141.01 | 0.821992 | 3.006181e-53 | 2.484258e-50 |
| MsG0480018201.01 | MsG0780040141.01 | 0.808837 | 2.545356e-50 | 1.470567e-47 |
| MsG0480018203.01 | MsG0780040141.01 | 0.803485 | 3.407965e-49 | 1.714693e-46 |
| MsG0480018329.01 | MsG0780040141.01 | 0.804561 | 2.035946e-49 | 1.053065e-46 |
| MsG0580026211.01 | MsG0780040141.01 | 0.803899 | 2.796196e-49 | 1.421983e-46 |
| MsG0580027325.01 | MsG0780040141.01 | 0.806788 | 6.939942e-50 | 3.800674e-47 |
| MsG0580030014.01 | MsG0780040141.01 | 0.813590 | 2.369887e-51 | 1.554065e-48 |
| MsG0580030197.01 | MsG0780040141.01 | 0.800904 | 1.158151e-48 | 5.457035e-46 |
| MsG0280007017.01 | MsG0780040141.01 | 0.803579 | 3.259642e-49 | 1.644073e-46 |
| MsG0280007136.01 | MsG0780040141.01 | 0.801467 | 8.883638e-49 | 4.245487e-46 |
| MsG0280007247.01 | MsG0780040141.01 | 0.823100 | 1.660966e-53 | 1.416639e-50 |
| MsG0280007649.01 | MsG0780040141.01 | 0.808789 | 2.606048e-50 | 1.503734e-47 |
| MsG0280007650.01 | MsG0780040141.01 | 0.820211 | 7.732115e-53 | 6.079660e-50 |
| MsG0280008430.01 | MsG0780040141.01 | 0.808288 | 3.333406e-50 | 1.898537e-47 |
| MsG0280010356.01 | MsG0780040141.01 | 0.810273 | 1.251022e-50 | 7.508191e-48 |
| MsG0780036067.01 | MsG0780040141.01 | 0.803458 | 3.453629e-49 | 1.736400e-46 |
| MsG0780036583.01 | MsG0780040141.01 | 0.802775 | 4.780481e-49 | 2.362009e-46 |
| MsG0780038106.01 | MsG0780040141.01 | 0.821470 | 3.968396e-53 | 3.231346e-50 |
| MsG0780039838.01 | MsG0780040141.01 | 0.813590 | 2.369887e-51 | 1.554065e-48 |
| MsG0780039839.01 | MsG0780040141.01 | 0.806114 | 9.626240e-50 | 5.181853e-47 |
| MsG0780039860.01 | MsG0780040141.01 | 0.801077 | 1.067316e-48 | 5.051153e-46 |
| MsG0780040018.01 | MsG0780040141.01 | 0.976415 | 8.786704e-142 | 1.464079e-135 |
| MsG0780040141.01 | MsG0780040142.01 | 0.816147 | 6.425344e-52 | 4.516791e-49 |
| MsG0780040141.01 | MsG0780040159.01 | 0.802757 | 4.821001e-49 | 2.380895e-46 |
| MsG0780040141.01 | MsG0780041288.01 | 0.839954 | 1.162960e-57 | 1.632010e-54 |
| MsG0780040141.01 | MsG0780041478.01 | 0.819200 | 1.315887e-52 | 1.005904e-49 |
| MsG0780040141.01 | MsG0780041809.01 | 0.822313 | 2.532446e-53 | 2.112184e-50 |
| MsG0780040141.01 | MsG0880041835.01 | 0.810837 | 9.450980e-51 | 5.758135e-48 |
| MsG0780040141.01 | MsG0880041855.01 | 0.807276 | 5.469517e-50 | 3.033736e-47 |
| MsG0780040141.01 | MsG0880042043.01 | 0.821241 | 4.482598e-53 | 3.626947e-50 |
| MsG0780040141.01 | MsG0880042858.01 | 0.800863 | 1.180311e-48 | 5.555593e-46 |
| MsG0780040141.01 | MsG0880042889.01 | 0.807595 | 4.682439e-50 | 2.618509e-47 |
| MsG0780040141.01 | MsG0880043343.01 | 0.811712 | 6.104253e-51 | 3.805826e-48 |
| MsG0780040141.01 | MsG0880045073.01 | 0.804233 | 2.383484e-49 | 1.222408e-46 |
| MsG0780040141.01 | MsG0880045369.01 | 0.800644 | 1.308336e-48 | 6.123913e-46 |
| MsG0780040141.01 | MsG0880045385.01 | 0.803537 | 3.324981e-49 | 1.675202e-46 |
| MsG0780040141.01 | MsG0880045778.01 | 0.810404 | 1.172513e-50 | 7.060952e-48 |
| MsG0780040141.01 | MsG0880046219.01 | 0.800592 | 1.340446e-48 | 6.265888e-46 |
| MsG0780040141.01 | MsG0880046584.01 | 0.830405 | 2.991634e-55 | 3.148869e-52 |
| MsG0780040141.01 | MsG0880046639.01 | 0.843393 | 1.440824e-58 | 2.251327e-55 |
| MsG0780040141.01 | MsG0880046876.01 | 0.816404 | 5.627526e-52 | 3.983821e-49 |
| MsG0780040141.01 | MsG0880047628.01 | 0.807464 | 4.990515e-50 | 2.781604e-47 |
| MsG0780040141.01 | MsG0880047661.01 | 0.806317 | 8.724737e-50 | 4.720852e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040141.01.T01 | MTR_7g085200 | 93.727 | 271 | 17 | 0 | 7 | 277 | 80 | 350 | 4.08e-173 | 486 |
| MsG0780040141.01.T01 | MTR_7g085200 | 93.040 | 273 | 17 | 1 | 7 | 277 | 80 | 352 | 5.49e-171 | 481 |
| MsG0780040141.01.T01 | MTR_7g085180 | 67.528 | 271 | 88 | 0 | 7 | 277 | 81 | 351 | 4.51e-131 | 379 |
| MsG0780040141.01.T01 | MTR_7g085150 | 68.266 | 271 | 86 | 0 | 7 | 277 | 102 | 372 | 2.57e-123 | 359 |
| MsG0780040141.01.T01 | MTR_7g085150 | 68.266 | 271 | 86 | 0 | 7 | 277 | 102 | 372 | 1.23e-122 | 358 |
| MsG0780040141.01.T01 | MTR_7g085120 | 66.667 | 273 | 91 | 0 | 5 | 277 | 79 | 351 | 5.11e-122 | 356 |
| MsG0780040141.01.T01 | MTR_7g085090 | 61.217 | 263 | 99 | 2 | 5 | 266 | 102 | 362 | 5.23e-102 | 305 |
| MsG0780040141.01.T01 | MTR_6g033000 | 58.175 | 263 | 109 | 1 | 5 | 266 | 115 | 377 | 2.08e-97 | 294 |
| MsG0780040141.01.T01 | MTR_4g036220 | 58.672 | 271 | 79 | 2 | 7 | 277 | 91 | 328 | 1.98e-93 | 283 |
| MsG0780040141.01.T01 | MTR_5g040710 | 31.179 | 263 | 147 | 9 | 6 | 245 | 113 | 364 | 2.45e-27 | 111 |
| MsG0780040141.01.T01 | MTR_4g105480 | 23.574 | 263 | 158 | 8 | 6 | 235 | 110 | 362 | 2.33e-18 | 85.1 |
| MsG0780040141.01.T01 | MTR_8g072360 | 34.328 | 134 | 87 | 1 | 6 | 138 | 158 | 291 | 9.75e-17 | 80.5 |
| MsG0780040141.01.T01 | MTR_5g025280 | 28.311 | 219 | 128 | 7 | 6 | 206 | 149 | 356 | 1.86e-13 | 70.5 |
| MsG0780040141.01.T01 | MTR_7g085160 | 65.957 | 47 | 16 | 0 | 201 | 247 | 50 | 96 | 3.36e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040141.01.T01 | AT5G18280 | 56.654 | 263 | 113 | 1 | 5 | 266 | 105 | 367 | 2.13e-94 | 286 |
| MsG0780040141.01.T01 | AT3G04080 | 55.513 | 263 | 116 | 1 | 5 | 266 | 104 | 366 | 1.11e-91 | 279 |
| MsG0780040141.01.T01 | AT1G14240 | 32.624 | 282 | 156 | 9 | 6 | 268 | 107 | 373 | 1.20e-34 | 130 |
| MsG0780040141.01.T01 | AT1G14240 | 32.624 | 282 | 156 | 9 | 6 | 268 | 107 | 373 | 1.20e-34 | 130 |
| MsG0780040141.01.T01 | AT1G14240 | 32.624 | 282 | 156 | 9 | 6 | 268 | 107 | 373 | 1.20e-34 | 130 |
| MsG0780040141.01.T01 | AT1G14240 | 31.915 | 282 | 154 | 10 | 6 | 268 | 107 | 369 | 3.86e-31 | 121 |
| MsG0780040141.01.T01 | AT1G14230 | 30.035 | 283 | 165 | 8 | 6 | 266 | 118 | 389 | 2.45e-30 | 119 |
| MsG0780040141.01.T01 | AT1G14250 | 29.965 | 287 | 162 | 9 | 6 | 266 | 108 | 381 | 4.42e-30 | 118 |
| MsG0780040141.01.T01 | AT2G02970 | 31.359 | 287 | 160 | 8 | 6 | 266 | 124 | 399 | 1.30e-29 | 117 |
| MsG0780040141.01.T01 | AT4G19180 | 27.727 | 220 | 127 | 7 | 6 | 206 | 196 | 402 | 1.03e-13 | 71.6 |
| MsG0780040141.01.T01 | AT4G19180 | 27.727 | 220 | 127 | 7 | 6 | 206 | 196 | 402 | 1.03e-13 | 71.6 |
| MsG0780040141.01.T01 | AT4G19180 | 27.727 | 220 | 127 | 7 | 6 | 206 | 196 | 402 | 1.03e-13 | 71.6 |
Find 86 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCAAGCTTAACGGGTGTTT+TGG | 0.212332 | 7:-73578212 | None:intergenic |
| TGCAGGCAACAGCAGGTTTA+AGG | 0.216942 | 7:+73579240 | MsG0780040141.01.T01:intron |
| CTCCTCTCCGAATATGTATA+TGG | 0.228227 | 7:-73581154 | None:intergenic |
| AACAGCAGGTTTAAGGCTTT+TGG | 0.255686 | 7:+73579247 | MsG0780040141.01.T01:CDS |
| GGTGACAATTAACTATGTTT+TGG | 0.262537 | 7:+73580674 | MsG0780040141.01.T01:intron |
| TGGAATGGTGGAGGAGGAAG+TGG | 0.301679 | 7:+73581295 | MsG0780040141.01.T01:CDS |
| CTCTTTGCATTCATCAATGT+TGG | 0.306724 | 7:-73581206 | None:intergenic |
| TATATTGTTTCCATGATATT+GGG | 0.324491 | 7:-73577758 | None:intergenic |
| GAATTCTTCCGAATTGATAT+TGG | 0.324511 | 7:+73579274 | MsG0780040141.01.T01:CDS |
| GTATATTGTTTCCATGATAT+TGG | 0.332361 | 7:-73577759 | None:intergenic |
| TCTTTGCATTCATCAATGTT+GGG | 0.343236 | 7:-73581205 | None:intergenic |
| GAGGTTAGAGTTTCTTGTTT+TGG | 0.355671 | 7:-73577802 | None:intergenic |
| CTCAAGAAGGTTCTTATTTG+TGG | 0.356315 | 7:+73579467 | MsG0780040141.01.T01:CDS |
| CATATTCGGAGAGGAGTATA+AGG | 0.362382 | 7:+73581161 | MsG0780040141.01.T01:CDS |
| CCAAAACACCCGTTAAGCTT+GGG | 0.375488 | 7:+73578212 | MsG0780040141.01.T01:CDS |
| GATCTAAGTTCTGATCAAAA+TGG | 0.383146 | 7:-73577876 | None:intergenic |
| AGAGACTCTGCTGCTTCCTT+CGG | 0.385467 | 7:-73578139 | None:intergenic |
| TCTTTCAGTTATTTGCGCTT+TGG | 0.386501 | 7:+73580947 | MsG0780040141.01.T01:intron |
| CCATATGGGAAATGTACTTT+TGG | 0.395209 | 7:+73581265 | MsG0780040141.01.T01:CDS |
| GTGAATGATCCATGTCCATA+TGG | 0.403181 | 7:+73581250 | MsG0780040141.01.T01:CDS |
| TTGAGACTGCATATACCATT+TGG | 0.410341 | 7:-73580758 | None:intergenic |
| CAAAGGCCCATATACATATT+CGG | 0.412325 | 7:+73581147 | MsG0780040141.01.T01:intron |
| TATGCTAGTTGTGTTATAAC+CGG | 0.415958 | 7:+73577634 | MsG0780040141.01.T01:five_prime_UTR |
| ATCTGCGTATGCACTCAAAC+CGG | 0.416171 | 7:-73578113 | None:intergenic |
| TCAAGAAGGTTCTTATTTGT+GGG | 0.427679 | 7:+73579468 | MsG0780040141.01.T01:CDS |
| TAGTTAGTTAGATGAATTGA+AGG | 0.429874 | 7:-73577607 | None:intergenic |
| CCAGCTAAAATGCAAGGATT+AGG | 0.433680 | 7:-73581016 | None:intergenic |
| CTTTCTGCTTGCTCTAAAAG+TGG | 0.437669 | 7:-73578166 | None:intergenic |
| CCCAAAACACCCGTTAAGCT+TGG | 0.438583 | 7:+73578211 | MsG0780040141.01.T01:CDS |
| TACCGCTTCCAATATCAATT+CGG | 0.439103 | 7:-73579282 | None:intergenic |
| ATGCAAAGAGATAATTCTTA+AGG | 0.447865 | 7:+73581219 | MsG0780040141.01.T01:CDS |
| TCCTCTCCCTCAGGTACTTG+TGG | 0.454926 | 7:-73580801 | None:intergenic |
| GAACCAACCCCAAGCTTAAC+GGG | 0.457717 | 7:-73578220 | None:intergenic |
| TCCTCTCCGAATATGTATAT+GGG | 0.458300 | 7:-73581153 | None:intergenic |
| ATCTCTTCCTCCCAATATCA+TGG | 0.459648 | 7:+73577748 | MsG0780040141.01.T01:five_prime_UTR |
| TACGCTGTCGTCTTTGATGC+TGG | 0.466964 | 7:+73577826 | MsG0780040141.01.T01:five_prime_UTR |
| ATTATTGATGGTACTCAAGA+AGG | 0.468345 | 7:+73579454 | MsG0780040141.01.T01:CDS |
| ACAGTGGCAGTAGCTGATCT+TGG | 0.468636 | 7:+73580723 | MsG0780040141.01.T01:CDS |
| AATATTACCTCTATGTTCAC+AGG | 0.473842 | 7:+73580859 | MsG0780040141.01.T01:CDS |
| GTCTTTGATGCTGGTAGCAC+CGG | 0.473853 | 7:+73577835 | MsG0780040141.01.T01:five_prime_UTR |
| CCAAAAGTACATTTCCCATA+TGG | 0.474809 | 7:-73581265 | None:intergenic |
| AGAACCAACCCCAAGCTTAA+CGG | 0.485534 | 7:-73578221 | None:intergenic |
| ATGTATGGATCCTCTCCCTC+AGG | 0.486133 | 7:-73580810 | None:intergenic |
| ATGATAATGCAGGCAACAGC+AGG | 0.490359 | 7:+73579233 | MsG0780040141.01.T01:intron |
| TTCCGAATTGATATTGGAAG+CGG | 0.494804 | 7:+73579280 | MsG0780040141.01.T01:CDS |
| GTGGCAGTAGCTGATCTTGG+AGG | 0.499054 | 7:+73580726 | MsG0780040141.01.T01:CDS |
| TATTGGGAGGAAGAGATTGT+AGG | 0.515388 | 7:-73577742 | None:intergenic |
| TGAATGATCCATGTCCATAT+GGG | 0.518375 | 7:+73581251 | MsG0780040141.01.T01:CDS |
| CTTTGCATTCATCAATGTTG+GGG | 0.519197 | 7:-73581204 | None:intergenic |
| GGGATATGGAATGGTGGAGG+AGG | 0.520774 | 7:+73581289 | MsG0780040141.01.T01:CDS |
| TAGTATGTGGCCAGTGGGAA+GGG | 0.525439 | 7:-73577670 | None:intergenic |
| AAATAAGCATATGATTGGTA+AGG | 0.538345 | 7:+73577543 | MsG0780040141.01.T01:five_prime_UTR |
| CAAAATAGTTCCCTTCCCAC+TGG | 0.538863 | 7:+73577660 | MsG0780040141.01.T01:five_prime_UTR |
| TCCACAAGTACCTGAGGGAG+AGG | 0.539184 | 7:+73580800 | MsG0780040141.01.T01:CDS |
| TTCATGTTGTAGACAACGCC+CGG | 0.539719 | 7:+73578094 | MsG0780040141.01.T01:intron |
| TTTAGAGCAAGCAGAAAGAG+TGG | 0.540525 | 7:+73578171 | MsG0780040141.01.T01:CDS |
| GATGCAGTAGGAATTATTGA+TGG | 0.541442 | 7:+73579442 | MsG0780040141.01.T01:CDS |
| TCTGCGTATGCACTCAAACC+GGG | 0.541965 | 7:-73578112 | None:intergenic |
| AACTTAGATCTTCTTCACAT+TGG | 0.549130 | 7:+73577889 | MsG0780040141.01.T01:five_prime_UTR |
| TGGCAGTAGCTGATCTTGGA+GGG | 0.552378 | 7:+73580727 | MsG0780040141.01.T01:CDS |
| AATGTTGGGGCCAGAAGCAG+TGG | 0.570473 | 7:-73581191 | None:intergenic |
| AATAAAACCTGTGAACATAG+AGG | 0.575004 | 7:-73580866 | None:intergenic |
| CAAAACACCCGTTAAGCTTG+GGG | 0.575382 | 7:+73578213 | MsG0780040141.01.T01:CDS |
| GGTGGGATATGGAATGGTGG+AGG | 0.578888 | 7:+73581286 | MsG0780040141.01.T01:CDS |
| GGAATGGTGGAGGAGGAAGT+GGG | 0.584814 | 7:+73581296 | MsG0780040141.01.T01:CDS |
| GCAGTAGCTGATCTTGGAGG+GGG | 0.588259 | 7:+73580729 | MsG0780040141.01.T01:CDS |
| GTAGACATGAACACGGCTAC+CGG | 0.589772 | 7:-73577854 | None:intergenic |
| TCCATGCTTGTTGTAGTATG+TGG | 0.591213 | 7:-73577683 | None:intergenic |
| ATCAAAGACGACAGCGTACG+AGG | 0.591264 | 7:-73577821 | None:intergenic |
| GGCAGTAGCTGATCTTGGAG+GGG | 0.592478 | 7:+73580728 | MsG0780040141.01.T01:CDS |
| GCCACATACTACAACAAGCA+TGG | 0.594864 | 7:+73577682 | MsG0780040141.01.T01:five_prime_UTR |
| TTTGGTGGGATATGGAATGG+TGG | 0.599237 | 7:+73581283 | MsG0780040141.01.T01:CDS |
| GTAGTATGTGGCCAGTGGGA+AGG | 0.602099 | 7:-73577671 | None:intergenic |
| TGATAGCCAGCTAAAATGCA+AGG | 0.615009 | 7:-73581022 | None:intergenic |
| TGTTGTAGTATGTGGCCAGT+GGG | 0.622928 | 7:-73577675 | None:intergenic |
| ATTGTTTCCATGATATTGGG+AGG | 0.626102 | 7:-73577755 | None:intergenic |
| AACGTACAATCTGATGCAGT+AGG | 0.629562 | 7:+73579430 | MsG0780040141.01.T01:CDS |
| AAGAGCTCCACAAGTACCTG+AGG | 0.640256 | 7:+73580794 | MsG0780040141.01.T01:CDS |
| GTACATTTCCCATATGGACA+TGG | 0.648948 | 7:-73581259 | None:intergenic |
| TAGCAGATACATACCCCTGT+AGG | 0.658964 | 7:-73581358 | None:intergenic |
| CAAAATGGTAGACATGAACA+CGG | 0.665622 | 7:-73577861 | None:intergenic |
| AGAGCTCCACAAGTACCTGA+GGG | 0.666757 | 7:+73580795 | MsG0780040141.01.T01:CDS |
| TGCATACGCAGATAATCCGA+AGG | 0.670146 | 7:+73578123 | MsG0780040141.01.T01:CDS |
| GCCCATATACATATTCGGAG+AGG | 0.689233 | 7:+73581152 | MsG0780040141.01.T01:CDS |
| ATGTTGGGGCCAGAAGCAGT+GGG | 0.698029 | 7:-73581190 | None:intergenic |
| TTGTTGTAGTATGTGGCCAG+TGG | 0.699635 | 7:-73577676 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTAAAATTAAAATAATAA+GGG | + | Chr7:73579853-73579872 | MsG0780040141.01.T01:intron | 0.0% |
| !! | TTATTAAAATTAAAATAATA+AGG | + | Chr7:73579852-73579871 | MsG0780040141.01.T01:intron | 0.0% |
| !! | ATTAATTAAATATTACATCT+TGG | + | Chr7:73577938-73577957 | MsG0780040141.01.T01:intron | 10.0% |
| !!! | TGTTTATACATATTTTATTA+GGG | - | Chr7:73579135-73579154 | None:intergenic | 10.0% |
| !!! | TTGTTTATACATATTTTATT+AGG | - | Chr7:73579136-73579155 | None:intergenic | 10.0% |
| !! | AAACAAAATATAAATCAAAG+TGG | + | Chr7:73579744-73579763 | MsG0780040141.01.T01:intron | 15.0% |
| !! | AAACATCATATAATATTTAG+AGG | - | Chr7:73578605-73578624 | None:intergenic | 15.0% |
| !! | AACCTATAAATATATTGAAT+TGG | - | Chr7:73580200-73580219 | None:intergenic | 15.0% |
| !! | AATCAATGCTTATAAATTTA+AGG | - | Chr7:73580032-73580051 | None:intergenic | 15.0% |
| !! | ATAAAAAAGATTGTACTTAA+AGG | + | Chr7:73580831-73580850 | MsG0780040141.01.T01:CDS | 15.0% |
| !! | TAATAAAATCGAAAATTCTA+TGG | + | Chr7:73578700-73578719 | MsG0780040141.01.T01:intron | 15.0% |
| !!! | AAGACTTTTTACTTTTTTTT+TGG | + | Chr7:73578648-73578667 | MsG0780040141.01.T01:intron | 15.0% |
| !!! | ATATATATATGTCTTATTTG+TGG | + | Chr7:73579538-73579557 | MsG0780040141.01.T01:intron | 15.0% |
| !!! | CTTTGATTTATATTTTGTTT+TGG | - | Chr7:73579744-73579763 | None:intergenic | 15.0% |
| !!! | GCATAATATTTTAATCAAAT+TGG | + | Chr7:73577577-73577596 | MsG0780040141.01.T01:five_prime_UTR | 15.0% |
| !!! | TAATGTTTTTTTTTGTTACA+AGG | + | Chr7:73578413-73578432 | MsG0780040141.01.T01:intron | 15.0% |
| !!! | TATATATATGTCTTATTTGT+GGG | + | Chr7:73579539-73579558 | MsG0780040141.01.T01:intron | 15.0% |
| !!! | TGTTGATAAAATTAATTGTA+GGG | + | Chr7:73581077-73581096 | MsG0780040141.01.T01:intron | 15.0% |
| !!! | TTTCGTATTTTAACTTTTTT+TGG | + | Chr7:73579157-73579176 | MsG0780040141.01.T01:intron | 15.0% |
| !! | AAATCATTACTTTGATCTAT+AGG | + | Chr7:73580173-73580192 | MsG0780040141.01.T01:intron | 20.0% |
| !! | AATCATTACTTTGATCTATA+GGG | + | Chr7:73580174-73580193 | MsG0780040141.01.T01:intron | 20.0% |
| !! | AATTAATTAACGCAGAATTA+TGG | + | Chr7:73577979-73577998 | MsG0780040141.01.T01:intron | 20.0% |
| !! | ACTCTATCCAAAAAAAAAAT+TGG | - | Chr7:73580605-73580624 | None:intergenic | 20.0% |
| !! | CAATATATTTATAGGTTGTT+TGG | + | Chr7:73580203-73580222 | MsG0780040141.01.T01:intron | 20.0% |
| !! | GGATAAAATTAGATTAAGTA+TGG | - | Chr7:73578862-73578881 | None:intergenic | 20.0% |
| !! | TAAACCACATTTAATTGAAT+CGG | + | Chr7:73580400-73580419 | MsG0780040141.01.T01:intron | 20.0% |
| !! | TATATTGTTTCCATGATATT+GGG | - | Chr7:73577761-73577780 | None:intergenic | 20.0% |
| !!! | AATGATGTTGAGTTTTATAA+AGG | + | Chr7:73577913-73577932 | MsG0780040141.01.T01:exon | 20.0% |
| !!! | ACAAACATGACAAATAATTT+TGG | - | Chr7:73578374-73578393 | None:intergenic | 20.0% |
| !!! | AGTACAATCTTTTTTATGTA+TGG | - | Chr7:73580828-73580847 | None:intergenic | 20.0% |
| !!! | ATAGTTTTTTACCTAAAAAC+CGG | + | Chr7:73580488-73580507 | MsG0780040141.01.T01:intron | 20.0% |
| !!! | ATATATACATCAACTTTTCA+TGG | + | Chr7:73579792-73579811 | MsG0780040141.01.T01:intron | 20.0% |
| !!! | CCTAAAGAAAATTTTATAGT+GGG | + | Chr7:73580369-73580388 | MsG0780040141.01.T01:intron | 20.0% |
| !!! | CTAAAGAAAATTTTATAGTG+GGG | + | Chr7:73580370-73580389 | MsG0780040141.01.T01:intron | 20.0% |
| !!! | CTGTTGATAAAATTAATTGT+AGG | + | Chr7:73581076-73581095 | MsG0780040141.01.T01:intron | 20.0% |
| !!! | GGTTTTATTCTTAATATTCT+TGG | + | Chr7:73580880-73580899 | MsG0780040141.01.T01:intron | 20.0% |
| !!! | TTAAGGTTTTAACACTTTTT+TGG | + | Chr7:73579335-73579354 | MsG0780040141.01.T01:intron | 20.0% |
| !!! | TTGAAATTTTATGATAATGC+AGG | + | Chr7:73579223-73579242 | MsG0780040141.01.T01:intron | 20.0% |
| !!! | TTTTGGAAATATTTTACGAT+TGG | - | Chr7:73577788-73577807 | None:intergenic | 20.0% |
| ! | AAAAAAAATTATCGTGTAGC+AGG | - | Chr7:73580536-73580555 | None:intergenic | 25.0% |
| ! | AAAAAAATTATCGTGTAGCA+GGG | - | Chr7:73580535-73580554 | None:intergenic | 25.0% |
| ! | AAATAAGCATATGATTGGTA+AGG | + | Chr7:73577543-73577562 | MsG0780040141.01.T01:five_prime_UTR | 25.0% |
| ! | AACTTCATTTCTCATGTTTA+AGG | + | Chr7:73579318-73579337 | MsG0780040141.01.T01:intron | 25.0% |
| ! | AAGATGAATTTCTAATCACA+AGG | - | Chr7:73578541-73578560 | None:intergenic | 25.0% |
| ! | AATCAAAGTGGTAATTGAAT+AGG | + | Chr7:73579756-73579775 | MsG0780040141.01.T01:intron | 25.0% |
| ! | AATGGCTTATCATCAATTTA+AGG | - | Chr7:73581117-73581136 | None:intergenic | 25.0% |
| ! | AGTTTATAGAAACTACTAAG+TGG | - | Chr7:73580304-73580323 | None:intergenic | 25.0% |
| ! | ATGCAAAGAGATAATTCTTA+AGG | + | Chr7:73581219-73581238 | MsG0780040141.01.T01:CDS | 25.0% |
| ! | CCTAAAAATAAGCATATGAT+TGG | + | Chr7:73577538-73577557 | MsG0780040141.01.T01:five_prime_UTR | 25.0% |
| ! | GGCCAATTCAATATATTTAT+AGG | + | Chr7:73580195-73580214 | MsG0780040141.01.T01:intron | 25.0% |
| ! | GTATATTGTTTCCATGATAT+TGG | - | Chr7:73577762-73577781 | None:intergenic | 25.0% |
| ! | TAGTTAGTTAGATGAATTGA+AGG | - | Chr7:73577610-73577629 | None:intergenic | 25.0% |
| ! | TGTTACACTTATAACAAAGT+AGG | - | Chr7:73578883-73578902 | None:intergenic | 25.0% |
| !! | AAAACCGATTCAATTAAATG+TGG | - | Chr7:73580407-73580426 | None:intergenic | 25.0% |
| !! | AACGGCATAAATTTTATCTA+TGG | + | Chr7:73580460-73580479 | MsG0780040141.01.T01:intron | 25.0% |
| !! | CCCACTATAAAATTTTCTTT+AGG | - | Chr7:73580372-73580391 | None:intergenic | 25.0% |
| !! | GCCTAAAGAAAATTTTATAG+TGG | + | Chr7:73580368-73580387 | MsG0780040141.01.T01:intron | 25.0% |
| !! | GTGACAATTAACTATGTTTT+GGG | + | Chr7:73580675-73580694 | MsG0780040141.01.T01:CDS | 25.0% |
| !! | TAGGAAAGAACTTTTCAAAT+TGG | - | Chr7:73580635-73580654 | None:intergenic | 25.0% |
| !! | TTGCAATGTCTTAATTTTGA+TGG | + | Chr7:73578245-73578264 | MsG0780040141.01.T01:intron | 25.0% |
| !!! | AGCCATTTTTTATTCTTCAA+AGG | + | Chr7:73581130-73581149 | MsG0780040141.01.T01:intron | 25.0% |
| !!! | AGCGAAACCAATTTTTTTTT+TGG | + | Chr7:73580595-73580614 | MsG0780040141.01.T01:intron | 25.0% |
| !!! | AGTCATGAGAATAACTTTTT+TGG | + | Chr7:73578726-73578745 | MsG0780040141.01.T01:intron | 25.0% |
| !!! | CCAATCATATGCTTATTTTT+AGG | - | Chr7:73577541-73577560 | None:intergenic | 25.0% |
| !!! | GAAATTTTGAAAGTCACTAA+TGG | + | Chr7:73580989-73581008 | MsG0780040141.01.T01:CDS | 25.0% |
| !!! | GTATTGATTAAAATAGCCTT+TGG | + | Chr7:73579692-73579711 | MsG0780040141.01.T01:intron | 25.0% |
| !!! | TTTTTTTTTGGATAGAGTAG+CGG | + | Chr7:73580607-73580626 | MsG0780040141.01.T01:intron | 25.0% |
| AAAAAATTATCGTGTAGCAG+GGG | - | Chr7:73580534-73580553 | None:intergenic | 30.0% | |
| AACAAGTCTTCTAACTTGAA+CGG | + | Chr7:73580442-73580461 | MsG0780040141.01.T01:intron | 30.0% | |
| AACTTAGATCTTCTTCACAT+TGG | + | Chr7:73577889-73577908 | MsG0780040141.01.T01:five_prime_UTR | 30.0% | |
| AATAAAACCTGTGAACATAG+AGG | - | Chr7:73580869-73580888 | None:intergenic | 30.0% | |
| AATATTACCTCTATGTTCAC+AGG | + | Chr7:73580859-73580878 | MsG0780040141.01.T01:CDS | 30.0% | |
| AGATGAATAAGTAGAGAATC+AGG | + | Chr7:73578564-73578583 | MsG0780040141.01.T01:intron | 30.0% | |
| ATCTCAATATGTGTTTGGTA+GGG | - | Chr7:73580348-73580367 | None:intergenic | 30.0% | |
| GAATTCTTCCGAATTGATAT+TGG | + | Chr7:73579274-73579293 | MsG0780040141.01.T01:CDS | 30.0% | |
| GATGAATAAGTAGAGAATCA+GGG | + | Chr7:73578565-73578584 | MsG0780040141.01.T01:intron | 30.0% | |
| TACCAATTCTCAAAAACCAA+AGG | - | Chr7:73579711-73579730 | None:intergenic | 30.0% | |
| TATGCTAGTTGTGTTATAAC+CGG | + | Chr7:73577634-73577653 | MsG0780040141.01.T01:five_prime_UTR | 30.0% | |
| TCTTAAGTGTTACACTTTGT+GGG | - | Chr7:73578907-73578926 | None:intergenic | 30.0% | |
| TCTTAGCATTTCTTATGCTT+GGG | + | Chr7:73579946-73579965 | MsG0780040141.01.T01:intron | 30.0% | |
| TCTTTGCATTCATCAATGTT+GGG | - | Chr7:73581208-73581227 | None:intergenic | 30.0% | |
| ! | ATTATTGATGGTACTCAAGA+AGG | + | Chr7:73579454-73579473 | MsG0780040141.01.T01:CDS | 30.0% |
| ! | ATTTTATTAGGGAGCTTCTA+TGG | - | Chr7:73579124-73579143 | None:intergenic | 30.0% |
| ! | GATCTAAGTTCTGATCAAAA+TGG | - | Chr7:73577879-73577898 | None:intergenic | 30.0% |
| ! | GGCCTTTGAAGAATAAAAAA+TGG | - | Chr7:73581135-73581154 | None:intergenic | 30.0% |
| ! | GGTGACAATTAACTATGTTT+TGG | + | Chr7:73580674-73580693 | MsG0780040141.01.T01:intron | 30.0% |
| ! | GTTATCTTGAAGAGTTGTTT+TGG | + | Chr7:73579921-73579940 | MsG0780040141.01.T01:intron | 30.0% |
| ! | TCAAGAAGGTTCTTATTTGT+GGG | + | Chr7:73579468-73579487 | MsG0780040141.01.T01:CDS | 30.0% |
| !! | AAAAGATTTTTCAGAGACAG+TGG | + | Chr7:73580707-73580726 | MsG0780040141.01.T01:CDS | 30.0% |
| !!! | AACTATGTTTTGGGAAACTT+GGG | + | Chr7:73580684-73580703 | MsG0780040141.01.T01:CDS | 30.0% |
| !!! | AGCTTATGGTTGTGTTTTTT+TGG | + | Chr7:73578330-73578349 | MsG0780040141.01.T01:intron | 30.0% |
| !!! | TAACTATGTTTTGGGAAACT+TGG | + | Chr7:73580683-73580702 | MsG0780040141.01.T01:CDS | 30.0% |
| AAGCTTTCATTTCCACATCT+AGG | + | Chr7:73579375-73579394 | MsG0780040141.01.T01:intron | 35.0% | |
| ATTGTTTCCATGATATTGGG+AGG | - | Chr7:73577758-73577777 | None:intergenic | 35.0% | |
| CAAAATGGTAGACATGAACA+CGG | - | Chr7:73577864-73577883 | None:intergenic | 35.0% | |
| CAAAGGCCCATATACATATT+CGG | + | Chr7:73581147-73581166 | MsG0780040141.01.T01:intron | 35.0% | |
| CAAGCATAAGAAATGCTAAG+AGG | - | Chr7:73579947-73579966 | None:intergenic | 35.0% | |
| CATCTCAATATGTGTTTGGT+AGG | - | Chr7:73580349-73580368 | None:intergenic | 35.0% | |
| CTCTTAGCATTTCTTATGCT+TGG | + | Chr7:73579945-73579964 | MsG0780040141.01.T01:intron | 35.0% | |
| CTCTTTGCATTCATCAATGT+TGG | - | Chr7:73581209-73581228 | None:intergenic | 35.0% | |
| CTTAAGTGTTACACTTTGTG+GGG | - | Chr7:73578906-73578925 | None:intergenic | 35.0% | |
| CTTAGCATTTCTTATGCTTG+GGG | + | Chr7:73579947-73579966 | MsG0780040141.01.T01:intron | 35.0% | |
| CTTTGCATTCATCAATGTTG+GGG | - | Chr7:73581207-73581226 | None:intergenic | 35.0% | |
| GATGCAGTAGGAATTATTGA+TGG | + | Chr7:73579442-73579461 | MsG0780040141.01.T01:CDS | 35.0% | |
| GTCTTAAGTGTTACACTTTG+TGG | - | Chr7:73578908-73578927 | None:intergenic | 35.0% | |
| TAACCTTGCAACATTTGTGT+AGG | + | Chr7:73580653-73580672 | MsG0780040141.01.T01:intron | 35.0% | |
| TACACAAATGTTGCAAGGTT+AGG | - | Chr7:73580654-73580673 | None:intergenic | 35.0% | |
| TACCGCTTCCAATATCAATT+CGG | - | Chr7:73579285-73579304 | None:intergenic | 35.0% | |
| TAGGCATCTCAATATGTGTT+TGG | - | Chr7:73580353-73580372 | None:intergenic | 35.0% | |
| TAGTAATGCTTGCAACATCT+TGG | - | Chr7:73578998-73579017 | None:intergenic | 35.0% | |
| TCCTCTCCGAATATGTATAT+GGG | - | Chr7:73581156-73581175 | None:intergenic | 35.0% | |
| TCTCACTAGTTCATAGCTTA+TGG | + | Chr7:73578316-73578335 | MsG0780040141.01.T01:intron | 35.0% | |
| TCTTTCAGTTATTTGCGCTT+TGG | + | Chr7:73580947-73580966 | MsG0780040141.01.T01:intron | 35.0% | |
| TGAATGATCCATGTCCATAT+GGG | + | Chr7:73581251-73581270 | MsG0780040141.01.T01:CDS | 35.0% | |
| TTCCGAATTGATATTGGAAG+CGG | + | Chr7:73579280-73579299 | MsG0780040141.01.T01:CDS | 35.0% | |
| TTGAGACTGCATATACCATT+TGG | - | Chr7:73580761-73580780 | None:intergenic | 35.0% | |
| ! | AATGTACTTTTGGTGGGATA+TGG | + | Chr7:73581275-73581294 | MsG0780040141.01.T01:CDS | 35.0% |
| ! | ATGGGAAATGTACTTTTGGT+GGG | + | Chr7:73581269-73581288 | MsG0780040141.01.T01:CDS | 35.0% |
| ! | ATTTTATTACGTGCCTACAG+GGG | + | Chr7:73581345-73581364 | MsG0780040141.01.T01:CDS | 35.0% |
| ! | CATTTTATTACGTGCCTACA+GGG | + | Chr7:73581344-73581363 | MsG0780040141.01.T01:CDS | 35.0% |
| ! | CCAAAAGTACATTTCCCATA+TGG | - | Chr7:73581268-73581287 | None:intergenic | 35.0% |
| ! | CCATATGGGAAATGTACTTT+TGG | + | Chr7:73581265-73581284 | MsG0780040141.01.T01:CDS | 35.0% |
| ! | CTCAAGAAGGTTCTTATTTG+TGG | + | Chr7:73579467-73579486 | MsG0780040141.01.T01:CDS | 35.0% |
| ! | TATGGGAAATGTACTTTTGG+TGG | + | Chr7:73581268-73581287 | MsG0780040141.01.T01:CDS | 35.0% |
| ! | TCATTTTATTACGTGCCTAC+AGG | + | Chr7:73581343-73581362 | MsG0780040141.01.T01:CDS | 35.0% |
| !! | GAGGTTAGAGTTTCTTGTTT+TGG | - | Chr7:73577805-73577824 | None:intergenic | 35.0% |
| !! | GATGAGTTGATCATACTATG+AGG | - | Chr7:73578827-73578846 | None:intergenic | 35.0% |
| !!! | AGCCTTTGGTTTTTGAGAAT+TGG | + | Chr7:73579706-73579725 | MsG0780040141.01.T01:intron | 35.0% |
| !!! | GAAGGGAACTATTTTGAAAC+CGG | - | Chr7:73577656-73577675 | None:intergenic | 35.0% |
| !!! | TGAGATTTGTACCGGTTTTT+AGG | - | Chr7:73580502-73580521 | None:intergenic | 35.0% |
| AACGTACAATCTGATGCAGT+AGG | + | Chr7:73579430-73579449 | MsG0780040141.01.T01:CDS | 40.0% | |
| ACTCCAACTCAGGTTTAGAA+TGG | + | Chr7:73580240-73580259 | MsG0780040141.01.T01:intron | 40.0% | |
| ATAGGAGACATACTGATGTG+TGG | + | Chr7:73580129-73580148 | MsG0780040141.01.T01:intron | 40.0% | |
| ATCTCTTCCTCCCAATATCA+TGG | + | Chr7:73577748-73577767 | MsG0780040141.01.T01:five_prime_UTR | 40.0% | |
| ATGCCATTGTACAAACAGTG+GGG | - | Chr7:73578792-73578811 | None:intergenic | 40.0% | |
| CCAGCTAAAATGCAAGGATT+AGG | - | Chr7:73581019-73581038 | None:intergenic | 40.0% | |
| CTCCTCTCCGAATATGTATA+TGG | - | Chr7:73581157-73581176 | None:intergenic | 40.0% | |
| GAATGTGCTTAGCAGGAATT+TGG | + | Chr7:73579891-73579910 | MsG0780040141.01.T01:intron | 40.0% | |
| GATGCCATTGTACAAACAGT+GGG | - | Chr7:73578793-73578812 | None:intergenic | 40.0% | |
| GTACATTTCCCATATGGACA+TGG | - | Chr7:73581262-73581281 | None:intergenic | 40.0% | |
| GTGAATGATCCATGTCCATA+TGG | + | Chr7:73581250-73581269 | MsG0780040141.01.T01:CDS | 40.0% | |
| TATTGGGAGGAAGAGATTGT+AGG | - | Chr7:73577745-73577764 | None:intergenic | 40.0% | |
| TCACCTACACAAATGTTGCA+AGG | - | Chr7:73580659-73580678 | None:intergenic | 40.0% | |
| TGATAGCCAGCTAAAATGCA+AGG | - | Chr7:73581025-73581044 | None:intergenic | 40.0% | |
| TGATGCCATTGTACAAACAG+TGG | - | Chr7:73578794-73578813 | None:intergenic | 40.0% | |
| TTGATGTGAATGTGCTTAGC+AGG | + | Chr7:73579884-73579903 | MsG0780040141.01.T01:intron | 40.0% | |
| TTTCGCTGTGAGATTTGTAC+CGG | - | Chr7:73580510-73580529 | None:intergenic | 40.0% | |
| ! | ACTTTTGGTGGGATATGGAA+TGG | + | Chr7:73581280-73581299 | MsG0780040141.01.T01:CDS | 40.0% |
| ! | CATATTCGGAGAGGAGTATA+AGG | + | Chr7:73581161-73581180 | MsG0780040141.01.T01:CDS | 40.0% |
| ! | TTTAGAGCAAGCAGAAAGAG+TGG | + | Chr7:73578171-73578190 | MsG0780040141.01.T01:CDS | 40.0% |
| !! | AACAGCAGGTTTAAGGCTTT+TGG | + | Chr7:73579247-73579266 | MsG0780040141.01.T01:CDS | 40.0% |
| !! | CAGGTTTAAGGCTTTTGGAT+GGG | + | Chr7:73579252-73579271 | MsG0780040141.01.T01:CDS | 40.0% |
| !! | CCTAATCCTTGCATTTTAGC+TGG | + | Chr7:73581016-73581035 | MsG0780040141.01.T01:CDS | 40.0% |
| !! | CTTTCTGCTTGCTCTAAAAG+TGG | - | Chr7:73578169-73578188 | None:intergenic | 40.0% |
| !! | TCCATGCTTGTTGTAGTATG+TGG | - | Chr7:73577686-73577705 | None:intergenic | 40.0% |
| !! | TGAGTGCAGTTGTTTGCTAT+AGG | + | Chr7:73580111-73580130 | MsG0780040141.01.T01:intron | 40.0% |
| !!! | TGCATTTTAGCTGGCTATCA+TGG | + | Chr7:73581025-73581044 | MsG0780040141.01.T01:CDS | 40.0% |
| ACACCCCACTGTTTGTACAA+TGG | + | Chr7:73578786-73578805 | MsG0780040141.01.T01:intron | 45.0% | |
| ACGTCTATCTACTCCAACTC+AGG | + | Chr7:73580230-73580249 | MsG0780040141.01.T01:intron | 45.0% | |
| AGAACCAACCCCAAGCTTAA+CGG | - | Chr7:73578224-73578243 | None:intergenic | 45.0% | |
| ATCTGCGTATGCACTCAAAC+CGG | - | Chr7:73578116-73578135 | None:intergenic | 45.0% | |
| CAAAACACCCGTTAAGCTTG+GGG | + | Chr7:73578213-73578232 | MsG0780040141.01.T01:CDS | 45.0% | |
| CAAAATAGTTCCCTTCCCAC+TGG | + | Chr7:73577660-73577679 | MsG0780040141.01.T01:five_prime_UTR | 45.0% | |
| CCAAAACACCCGTTAAGCTT+GGG | + | Chr7:73578212-73578231 | MsG0780040141.01.T01:CDS | 45.0% | |
| GACATACTGATGTGTGGATG+TGG | + | Chr7:73580135-73580154 | MsG0780040141.01.T01:intron | 45.0% | |
| GATGTGTGGATGTGGTTAAG+AGG | + | Chr7:73580143-73580162 | MsG0780040141.01.T01:intron | 45.0% | |
| GCCACATACTACAACAAGCA+TGG | + | Chr7:73577682-73577701 | MsG0780040141.01.T01:five_prime_UTR | 45.0% | |
| GCCCATATACATATTCGGAG+AGG | + | Chr7:73581152-73581171 | MsG0780040141.01.T01:CDS | 45.0% | |
| GTGTTTGGTAGGGCGTATAT+TGG | - | Chr7:73580338-73580357 | None:intergenic | 45.0% | |
| TAGCAGATACATACCCCTGT+AGG | - | Chr7:73581361-73581380 | None:intergenic | 45.0% | |
| TGCATACGCAGATAATCCGA+AGG | + | Chr7:73578123-73578142 | MsG0780040141.01.T01:CDS | 45.0% | |
| TGTTGTAGTATGTGGCCAGT+GGG | - | Chr7:73577678-73577697 | None:intergenic | 45.0% | |
| TTCATGTTGTAGACAACGCC+CGG | + | Chr7:73578094-73578113 | MsG0780040141.01.T01:intron | 45.0% | |
| TTGTTGTAGTATGTGGCCAG+TGG | - | Chr7:73577679-73577698 | None:intergenic | 45.0% | |
| TTTGGTGGGATATGGAATGG+TGG | + | Chr7:73581283-73581302 | MsG0780040141.01.T01:CDS | 45.0% | |
| ! | ATGATAATGCAGGCAACAGC+AGG | + | Chr7:73579233-73579252 | MsG0780040141.01.T01:intron | 45.0% |
| ! | GTGCCATTCTAAACCTGAGT+TGG | - | Chr7:73580246-73580265 | None:intergenic | 45.0% |
| !! | CCAAGCTTAACGGGTGTTTT+GGG | - | Chr7:73578214-73578233 | None:intergenic | 45.0% |
| !! | GCAGGTTTAAGGCTTTTGGA+TGG | + | Chr7:73579251-73579270 | MsG0780040141.01.T01:CDS | 45.0% |
| !! | ATTAAAATTAAAATAATAAG+GGG | + | Chr7:73579854-73579873 | MsG0780040141.01.T01:intron | 5.0% |
| AAGAGCTCCACAAGTACCTG+AGG | + | Chr7:73580794-73580813 | MsG0780040141.01.T01:CDS | 50.0% | |
| ACAGTGGCAGTAGCTGATCT+TGG | + | Chr7:73580723-73580742 | MsG0780040141.01.T01:CDS | 50.0% | |
| AGAGCTCCACAAGTACCTGA+GGG | + | Chr7:73580795-73580814 | MsG0780040141.01.T01:CDS | 50.0% | |
| ATCAAAGACGACAGCGTACG+AGG | - | Chr7:73577824-73577843 | None:intergenic | 50.0% | |
| ATGTATGGATCCTCTCCCTC+AGG | - | Chr7:73580813-73580832 | None:intergenic | 50.0% | |
| CCCAAAACACCCGTTAAGCT+TGG | + | Chr7:73578211-73578230 | MsG0780040141.01.T01:CDS | 50.0% | |
| GAACCAACCCCAAGCTTAAC+GGG | - | Chr7:73578223-73578242 | None:intergenic | 50.0% | |
| GCAAACTCGACACCTAGATG+TGG | - | Chr7:73579390-73579409 | None:intergenic | 50.0% | |
| GGAGCTTCTATGGTGCAATC+AGG | - | Chr7:73579114-73579133 | None:intergenic | 50.0% | |
| GTAGACATGAACACGGCTAC+CGG | - | Chr7:73577857-73577876 | None:intergenic | 50.0% | |
| GTCTTTGATGCTGGTAGCAC+CGG | + | Chr7:73577835-73577854 | MsG0780040141.01.T01:five_prime_UTR | 50.0% | |
| TACGCTGTCGTCTTTGATGC+TGG | + | Chr7:73577826-73577845 | MsG0780040141.01.T01:five_prime_UTR | 50.0% | |
| TAGTATGTGGCCAGTGGGAA+GGG | - | Chr7:73577673-73577692 | None:intergenic | 50.0% | |
| TCTGCGTATGCACTCAAACC+GGG | - | Chr7:73578115-73578134 | None:intergenic | 50.0% | |
| TGCAGGCAACAGCAGGTTTA+AGG | + | Chr7:73579240-73579259 | MsG0780040141.01.T01:intron | 50.0% | |
| TGGCAGTAGCTGATCTTGGA+GGG | + | Chr7:73580727-73580746 | MsG0780040141.01.T01:CDS | 50.0% | |
| ! | AGAGACTCTGCTGCTTCCTT+CGG | - | Chr7:73578142-73578161 | None:intergenic | 50.0% |
| ! | AGGCATTTTCCCACTGCTTC+TGG | + | Chr7:73581181-73581200 | MsG0780040141.01.T01:CDS | 50.0% |
| !! | CCCAAGCTTAACGGGTGTTT+TGG | - | Chr7:73578215-73578234 | None:intergenic | 50.0% |
| !! | GTTTTGGGCTGCAGATTCAC+AGG | - | Chr7:73578199-73578218 | None:intergenic | 50.0% |
| AATGTTGGGGCCAGAAGCAG+TGG | - | Chr7:73581194-73581213 | None:intergenic | 55.0% | |
| ACACCCGTTAAGCTTGGGGT+TGG | + | Chr7:73578217-73578236 | MsG0780040141.01.T01:intron | 55.0% | |
| ATGTTGGGGCCAGAAGCAGT+GGG | - | Chr7:73581193-73581212 | None:intergenic | 55.0% | |
| GCAGTAGCTGATCTTGGAGG+GGG | + | Chr7:73580729-73580748 | MsG0780040141.01.T01:CDS | 55.0% | |
| GGCAGTAGCTGATCTTGGAG+GGG | + | Chr7:73580728-73580747 | MsG0780040141.01.T01:CDS | 55.0% | |
| GGTGGGATATGGAATGGTGG+AGG | + | Chr7:73581286-73581305 | MsG0780040141.01.T01:CDS | 55.0% | |
| GTAGTATGTGGCCAGTGGGA+AGG | - | Chr7:73577674-73577693 | None:intergenic | 55.0% | |
| GTGGCAGTAGCTGATCTTGG+AGG | + | Chr7:73580726-73580745 | MsG0780040141.01.T01:CDS | 55.0% | |
| TCCACAAGTACCTGAGGGAG+AGG | + | Chr7:73580800-73580819 | MsG0780040141.01.T01:CDS | 55.0% | |
| TCCTCTCCCTCAGGTACTTG+TGG | - | Chr7:73580804-73580823 | None:intergenic | 55.0% | |
| TGGAGGGGGATCAGTCCAAA+TGG | + | Chr7:73580743-73580762 | MsG0780040141.01.T01:CDS | 55.0% | |
| ! | GGAATGGTGGAGGAGGAAGT+GGG | + | Chr7:73581296-73581315 | MsG0780040141.01.T01:CDS | 55.0% |
| ! | GGGATATGGAATGGTGGAGG+AGG | + | Chr7:73581289-73581308 | MsG0780040141.01.T01:CDS | 55.0% |
| ! | TGGAATGGTGGAGGAGGAAG+TGG | + | Chr7:73581295-73581314 | MsG0780040141.01.T01:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 73577509 | 73581390 | 73577509 | ID=MsG0780040141.01;Name=MsG0780040141.01 |
| Chr7 | mRNA | 73577509 | 73581390 | 73577509 | ID=MsG0780040141.01.T01;Parent=MsG0780040141.01;Name=MsG0780040141.01.T01;_AED=0.49;_eAED=0.50;_QI=405|1|0.85|1|0.83|0.85|7|0|278 |
| Chr7 | exon | 73577509 | 73577934 | 73577509 | ID=MsG0780040141.01.T01:exon:10079;Parent=MsG0780040141.01.T01 |
| Chr7 | exon | 73578106 | 73578234 | 73578106 | ID=MsG0780040141.01.T01:exon:10080;Parent=MsG0780040141.01.T01 |
| Chr7 | exon | 73579245 | 73579301 | 73579245 | ID=MsG0780040141.01.T01:exon:10081;Parent=MsG0780040141.01.T01 |
| Chr7 | exon | 73579397 | 73579489 | 73579397 | ID=MsG0780040141.01.T01:exon:10082;Parent=MsG0780040141.01.T01 |
| Chr7 | exon | 73580675 | 73580880 | 73580675 | ID=MsG0780040141.01.T01:exon:10083;Parent=MsG0780040141.01.T01 |
| Chr7 | exon | 73580955 | 73581046 | 73580955 | ID=MsG0780040141.01.T01:exon:10084;Parent=MsG0780040141.01.T01 |
| Chr7 | exon | 73581152 | 73581390 | 73581152 | ID=MsG0780040141.01.T01:exon:10085;Parent=MsG0780040141.01.T01 |
| Chr7 | five_prime_UTR | 73577509 | 73577913 | 73577509 | ID=MsG0780040141.01.T01:five_prime_utr;Parent=MsG0780040141.01.T01 |
| Chr7 | CDS | 73577914 | 73577934 | 73577914 | ID=MsG0780040141.01.T01:cds;Parent=MsG0780040141.01.T01 |
| Chr7 | CDS | 73578106 | 73578234 | 73578106 | ID=MsG0780040141.01.T01:cds;Parent=MsG0780040141.01.T01 |
| Chr7 | CDS | 73579245 | 73579301 | 73579245 | ID=MsG0780040141.01.T01:cds;Parent=MsG0780040141.01.T01 |
| Chr7 | CDS | 73579397 | 73579489 | 73579397 | ID=MsG0780040141.01.T01:cds;Parent=MsG0780040141.01.T01 |
| Chr7 | CDS | 73580675 | 73580880 | 73580675 | ID=MsG0780040141.01.T01:cds;Parent=MsG0780040141.01.T01 |
| Chr7 | CDS | 73580955 | 73581046 | 73580955 | ID=MsG0780040141.01.T01:cds;Parent=MsG0780040141.01.T01 |
| Chr7 | CDS | 73581152 | 73581390 | 73581152 | ID=MsG0780040141.01.T01:cds;Parent=MsG0780040141.01.T01 |
| Gene Sequence |
| Protein sequence |
