AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280011276.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011276.01.T01 MTR_2g101380 96.859 191 6 0 1 191 1 191 4.48e-138 383
MsG0280011276.01.T01 MTR_1g011510 53.846 104 46 2 72 174 60 162 2.51e-24 94.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011276.01.T01 AT3G16250 64.088 181 52 5 18 186 20 199 4.44e-77 229
MsG0280011276.01.T01 AT4G32590 53.846 104 46 2 72 174 70 172 1.94e-25 97.1
MsG0280011276.01.T01 AT4G32590 49.074 108 53 2 57 163 55 161 4.18e-19 80.9

Find 175 sgRNAs with CRISPR-Local

Find 276 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTTCATACATTATTCTTTA+TGG 0.076713 2:-81863715 None:intergenic
CATTTCCTCATGTGCTATTT+TGG 0.107288 2:+81861820 None:intergenic
ACTCCTCTAAAACTCTAAAA+TGG 0.152772 2:+81861142 None:intergenic
AGTTGAGTGGTTTAAATAAT+TGG 0.166236 2:-81861097 MsG0280011276.01.T01:three_prime_UTR
ACCCAAATGGGTGGTATAAA+TGG 0.190562 2:+81861040 None:intergenic
TATTGGGTTGGACCTCTTAT+TGG 0.194787 2:+81860485 MsG0280011277.01.T01:CDS
TGACCTTCGGGTTGGCTATT+AGG 0.200221 2:+81859996 MsG0280011277.01.T01:CDS
GACCTTCGGGTTGGCTATTA+GGG 0.216216 2:+81859997 MsG0280011277.01.T01:CDS
TGCACTTGGCATAACATAAT+TGG 0.228924 2:-81861799 MsG0280011276.01.T01:three_prime_UTR
CATGCTAATCTCCAATTCTT+TGG 0.246574 2:+81862625 None:intergenic
CCCATTTATACCACCCATTT+GGG 0.263239 2:-81861041 MsG0280011276.01.T01:three_prime_UTR
GTCAGAAAGCAACTGATATT+TGG 0.264267 2:-81861311 MsG0280011276.01.T01:three_prime_UTR
TACTGGATTGCACAACTTCT+TGG 0.270070 2:+81860049 MsG0280011277.01.T01:CDS
GTCCCTAATGATCCTTTCTT+AGG 0.271255 2:-81860326 MsG0280011276.01.T01:three_prime_UTR
CATCTATTTCACAAATTTGC+AGG 0.273893 2:-81860755 MsG0280011276.01.T01:three_prime_UTR
ACCATAACAACTGGATCTAT+TGG 0.279624 2:+81860468 MsG0280011277.01.T01:CDS
TCCCATTTATACCACCCATT+TGG 0.279886 2:-81861042 MsG0280011276.01.T01:three_prime_UTR
AGTGCCGACTGCTCTAATTT+TGG 0.281013 2:+81863442 None:intergenic
CCTATCCACAGTGTTGCTTC+TGG 0.305795 2:+81860221 MsG0280011277.01.T01:CDS
ATGAATCCGGCACGTTCATT+TGG 0.314171 2:+81860422 MsG0280011277.01.T01:CDS
GAGAGACGTGTGAATGCATT+AGG 0.321958 2:+81863515 None:intergenic
ACAGAAATTATCATAACATT+TGG 0.330200 2:+81860269 MsG0280011277.01.T01:CDS
GATCCTAAGAAAGGATCATT+AGG 0.331020 2:+81860323 MsG0280011277.01.T01:CDS
GACAAATGCAAAACCTATAG+AGG 0.334673 2:+81863370 None:intergenic
ACCTCTTATTGGTGGTGGTT+TGG 0.336316 2:+81860496 MsG0280011277.01.T01:CDS
ATCCTTTGAATGTAAACATT+TGG 0.340032 2:+81860674 None:intergenic
GTTGAGTGGTTTAAATAATT+GGG 0.343377 2:-81861096 MsG0280011276.01.T01:three_prime_UTR
TGTGTTCCTCCATAATAAAA+AGG 0.345442 2:+81860617 MsG0280011277.01.T01:three_prime_UTR
CCTTGTCCACTACAAGAAAA+TGG 0.347151 2:-81862035 MsG0280011276.01.T01:three_prime_UTR
GGTTTGGCTGGTGTCATCTA+TGG 0.353100 2:+81860512 MsG0280011277.01.T01:CDS
CTTTATAGAAACCAAAGAAT+TGG 0.359961 2:-81862636 MsG0280011276.01.T01:intron
GTCAACCCAGCCGTGACCTT+CGG 0.360207 2:+81859983 MsG0280011277.01.T01:CDS
AGAGTAATGGCTTGAGTCCT+TGG 0.360593 2:-81860889 MsG0280011276.01.T01:three_prime_UTR
CCCAATAGATCCAGTTGTTA+TGG 0.363853 2:-81860469 MsG0280011276.01.T01:three_prime_UTR
TTATCTCATATAATTTGAAT+TGG 0.367948 2:+81863686 None:intergenic
ACAATTGCACCAATTGCTAT+TGG 0.368535 2:+81860347 MsG0280011277.01.T01:CDS
CTTATTGGTGGTGGTTTGGC+TGG 0.371194 2:+81860500 MsG0280011277.01.T01:CDS
GATTCTAACATTGAACTCTA+TGG 0.373731 2:-81863119 MsG0280011276.01.T01:CDS
AACTAGTGTTATGTTGTTGA+AGG 0.378823 2:+81863586 None:intergenic
TCAACCCAGCCGTGACCTTC+GGG 0.382552 2:+81859984 MsG0280011277.01.T01:CDS
ATTGCTATTGGTTTGATTGT+TGG 0.383502 2:+81860359 MsG0280011277.01.T01:CDS
TCTGTTGGAGCCAACATATC+TGG 0.390137 2:+81859953 MsG0280011277.01.T01:CDS
TAGGGGTTAGTTTGAGTTGG+AGG 0.393377 2:+81863534 None:intergenic
TCTAATGACCCTCCCTCTAT+AGG 0.394740 2:-81863383 MsG0280011276.01.T01:CDS
GTTGCTTCTGGTGTTGGAGC+TGG 0.401927 2:+81860233 MsG0280011277.01.T01:CDS
TGAATCCGGCACGTTCATTT+GGG 0.407305 2:+81860423 MsG0280011277.01.T01:CDS
AATCTTGTGCTTCTTGATCC+TGG 0.407919 2:-81862090 MsG0280011276.01.T01:three_prime_UTR
CACAGTGTTGCTTCTGGTGT+TGG 0.413388 2:+81860227 MsG0280011277.01.T01:CDS
GGTACTCTCTTTGAGAGTAA+TGG 0.415927 2:-81860902 MsG0280011276.01.T01:three_prime_UTR
CCACATCCATGCAACCCAAA+TGG 0.417019 2:+81861027 None:intergenic
GGATTTCTGTGAACAATACT+TGG 0.419626 2:-81860734 MsG0280011276.01.T01:three_prime_UTR
GCCCTCAGACCATGTACCTT+TGG 0.420648 2:+81860547 MsG0280011277.01.T01:CDS
CTTGTAAAGAGTGTTGTGTT+TGG 0.421734 2:+81863467 None:intergenic
CCATAACAACTGGATCTATT+GGG 0.423483 2:+81860469 MsG0280011277.01.T01:CDS
CTCTGGTGGTTCAATGAATC+CGG 0.425020 2:+81860409 MsG0280011277.01.T01:CDS
TGCTCTAAGAGCATAATTAT+CGG 0.428890 2:-81861373 MsG0280011276.01.T01:intron
TGGAGTGTGTGTTTCATTTG+TGG 0.429047 2:+81863633 None:intergenic
TGCATGGAATTTGAGCTTAG+TGG 0.430235 2:+81863613 None:intergenic
CATTCATGTCCTTTCCACTC+TGG 0.430702 2:+81862419 None:intergenic
CTCCTCAAGTTTGCCACAGG+AGG 0.433870 2:+81860091 MsG0280011277.01.T01:CDS
AGAGACGTGTGAATGCATTA+GGG 0.437849 2:+81863516 None:intergenic
TGCACATCTGGTGTTCCATC+TGG 0.437999 2:+81863188 None:intergenic
AACCAAATGTTTACATTCAA+AGG 0.442503 2:-81860676 MsG0280011276.01.T01:three_prime_UTR
AAGTAATATAATATATTATG+TGG 0.443312 2:-81861066 MsG0280011276.01.T01:three_prime_UTR
TCCTCACCGGTATCTTCTAC+TGG 0.444081 2:+81860032 MsG0280011277.01.T01:CDS
CTCCTCTAAAACTCTAAAAT+GGG 0.446112 2:+81861143 None:intergenic
CCATTTGGGTTGCATGGATG+TGG 0.446268 2:-81861027 MsG0280011276.01.T01:three_prime_UTR
GTGGTGACTACCATAACAAC+TGG 0.450298 2:+81860459 MsG0280011277.01.T01:CDS
CATTAGGGGTTAGTTTGAGT+TGG 0.450485 2:+81863531 None:intergenic
GGTGCAGCTCTTGATCCTGC+TGG 0.451296 2:+81859881 MsG0280011277.01.T01:CDS
ATTTGCTATTAGGTTCTTGA+AGG 0.451453 2:-81862861 MsG0280011276.01.T01:intron
TACCACCCATTTGGGTTGCA+TGG 0.455334 2:-81861033 MsG0280011276.01.T01:three_prime_UTR
AAGTCTCTCCTCTCTCCCTT+TGG 0.462562 2:-81860923 MsG0280011276.01.T01:three_prime_UTR
CACATCCATGCAACCCAAAT+GGG 0.463293 2:+81861028 None:intergenic
AGGATTCCAACCTTGTACAT+TGG 0.463397 2:-81861867 MsG0280011276.01.T01:three_prime_UTR
TGGGTTGGACCTCTTATTGG+TGG 0.464450 2:+81860488 MsG0280011277.01.T01:CDS
AATTATCATAACATTTGGAT+TGG 0.465289 2:+81860274 MsG0280011277.01.T01:CDS
TTTGCAGCTAAGTTGACATC+AGG 0.466178 2:+81859860 MsG0280011277.01.T01:intron
CCCAAATGGGTGGTATAAAT+GGG 0.467994 2:+81861041 None:intergenic
GTTGGACCTCTTATTGGTGG+TGG 0.469086 2:+81860491 MsG0280011277.01.T01:CDS
ACAATCAAACCAATAGCAAT+TGG 0.470369 2:-81860356 MsG0280011276.01.T01:three_prime_UTR
GAGGAGAAAGCATGCCACTA+TGG 0.473275 2:-81860074 MsG0280011276.01.T01:three_prime_UTR
CAAGTTTGCCACAGGAGGCT+TGG 0.473516 2:+81860096 MsG0280011277.01.T01:CDS
TTAGCTGCAGGACCATTCTC+TGG 0.477678 2:+81860392 MsG0280011277.01.T01:CDS
GCTGTACGATAATGCACATC+TGG 0.480063 2:+81863176 None:intergenic
GCCAACCCGAAGGTCACGGC+TGG 0.481029 2:-81859989 MsG0280011276.01.T01:three_prime_UTR
TATTGTTATTGTAAGATAAG+TGG 0.482367 2:-81861168 MsG0280011276.01.T01:three_prime_UTR
GTGGGTGAAGCAGATTCTAC+AGG 0.486617 2:-81862592 MsG0280011276.01.T01:CDS
GCCAAACCACCACCAATAAG+AGG 0.493921 2:-81860497 MsG0280011276.01.T01:three_prime_UTR
TGTTCATGAAACATTAATAG+AGG 0.496334 2:+81860707 None:intergenic
ACAACTTCTTGGTTCCATAG+TGG 0.497833 2:+81860060 MsG0280011277.01.T01:CDS
CACTATTTATGCACAACTCA+AGG 0.500269 2:+81860985 None:intergenic
TTATTTCCAATGTACAAGGT+TGG 0.502984 2:+81861861 None:intergenic
CTATTAGGTTCTTGAAGGCA+AGG 0.503895 2:-81862856 MsG0280011276.01.T01:intron
TCTGGTGTTGGAGCTGGTGA+AGG 0.508041 2:+81860239 MsG0280011277.01.T01:CDS
GAAGCTTAGGAACATAATGT+TGG 0.511451 2:-81863141 MsG0280011276.01.T01:CDS
TTTCTCCTCAAGTTTGCCAC+AGG 0.511598 2:+81860088 MsG0280011277.01.T01:CDS
CGGCACTGTCCCTGAAAAGA+AGG 0.512597 2:-81863426 MsG0280011276.01.T01:CDS
ATCCTAAGAAAGGATCATTA+GGG 0.512697 2:+81860324 MsG0280011277.01.T01:CDS
CTTGTGGTGGACAGAAGCTT+AGG 0.512735 2:-81863154 MsG0280011276.01.T01:CDS
ATTGTTATTGTAAGATAAGT+GGG 0.514386 2:-81861167 MsG0280011276.01.T01:three_prime_UTR
TTCATTGAACCACCAGAGAA+TGG 0.521007 2:-81860404 MsG0280011276.01.T01:three_prime_UTR
ACATGAATGGAAATATGAAA+AGG 0.521149 2:-81862405 MsG0280011276.01.T01:CDS
TTTGGGCCTGCAGTTGTAAG+TGG 0.525678 2:+81860440 MsG0280011277.01.T01:CDS
AAGAGCAAAACCATGACAAA+CGG 0.527064 2:-81859918 MsG0280011276.01.T01:three_prime_UTR
CAGAGTGGAAAGGACATGAA+TGG 0.529406 2:-81862418 MsG0280011276.01.T01:CDS
GTACTTATTTCCAATGTACA+AGG 0.532016 2:+81861857 None:intergenic
AACAACTGGATCTATTGGGT+TGG 0.532605 2:+81860473 MsG0280011277.01.T01:CDS
GGTGCCAACATCTTAGCTGC+AGG 0.533016 2:+81860380 MsG0280011277.01.T01:CDS
TCTTGATCCTGGTGATAGCT+AGG 0.533485 2:-81862079 MsG0280011276.01.T01:three_prime_UTR
GTAGCAGTTGCCGTTTGTCA+TGG 0.534024 2:+81859908 MsG0280011277.01.T01:CDS
TGGCATAACATAATTGGTTG+AGG 0.542000 2:-81861793 MsG0280011276.01.T01:three_prime_UTR
TTTCTGGTAGCTCAGTTCCA+TGG 0.547316 2:+81861939 None:intergenic
AATCACTAGCCAAAGGTACA+TGG 0.550844 2:-81860556 MsG0280011276.01.T01:three_prime_UTR
GACATGTCCACCAGATATGT+TGG 0.557831 2:-81859963 MsG0280011276.01.T01:three_prime_UTR
CCCAGCCGTGACCTTCGGGT+TGG 0.560693 2:+81859988 MsG0280011277.01.T01:CDS
TGGAACTTGTGCTACATGTA+TGG 0.561485 2:-81862981 MsG0280011276.01.T01:CDS
TTTCTTAGGATCAGCTGCTG+TGG 0.561728 2:-81860312 MsG0280011276.01.T01:three_prime_UTR
AGCCTCCTGTGGCAAACTTG+AGG 0.564648 2:-81860093 MsG0280011276.01.T01:three_prime_UTR
ACAGCAGCTGATCCTAAGAA+AGG 0.565051 2:+81860314 MsG0280011277.01.T01:CDS
AGAGAGTACCAAAGGGAGAG+AGG 0.568863 2:+81860915 None:intergenic
TAGTCTGTGTTGCTACCAGA+TGG 0.569681 2:-81863203 MsG0280011276.01.T01:CDS
ATAGAAGAAGACTTAGTCCA+AGG 0.572691 2:+81860872 None:intergenic
TGGGTGAAGCAGATTCTACA+GGG 0.575014 2:-81862591 MsG0280011276.01.T01:CDS
CTCTCAAAGAGAGTACCAAA+GGG 0.575376 2:+81860908 None:intergenic
TGCAATCCAGTAGAAGATAC+CGG 0.579827 2:-81860038 MsG0280011276.01.T01:three_prime_UTR
TAGTCACCACTTACAACTGC+AGG 0.580347 2:-81860446 MsG0280011276.01.T01:three_prime_UTR
GCAACTGCTACTAATCCAGC+AGG 0.581333 2:-81859896 MsG0280011276.01.T01:three_prime_UTR
AGTAGTAAAACTTAACAAAG+TGG 0.586424 2:-81861278 MsG0280011276.01.T01:three_prime_UTR
AGCCAAAGGTACATGGTCTG+AGG 0.586441 2:-81860549 MsG0280011276.01.T01:three_prime_UTR
GATCCTGGTGATAGCTAGGA+CGG 0.588930 2:-81862075 MsG0280011276.01.T01:three_prime_UTR
TCTTTCTCTTTGTCAGTGCG+AGG 0.589508 2:+81862822 None:intergenic
ATTTAGAAAATGTAGTTGAG+TGG 0.591489 2:-81861110 MsG0280011276.01.T01:three_prime_UTR
ACTCTCAAAGAGAGTACCAA+AGG 0.592193 2:+81860907 None:intergenic
ATGGTCGAGTTTGAATCAAG+TGG 0.592731 2:+81861958 None:intergenic
ATAAGCCAAAATAGCACATG+AGG 0.593788 2:-81861825 MsG0280011276.01.T01:three_prime_UTR
GCCAAAGGTACATGGTCTGA+GGG 0.595712 2:-81860548 MsG0280011276.01.T01:three_prime_UTR
GCAGGCCCAAATGAACGTGC+CGG 0.597880 2:-81860428 MsG0280011276.01.T01:three_prime_UTR
GCTGCAGGACCATTCTCTGG+TGG 0.598201 2:+81860395 MsG0280011277.01.T01:CDS
ACCTTCGGGTTGGCTATTAG+GGG 0.598664 2:+81859998 MsG0280011277.01.T01:CDS
AATAGCCAACCCGAAGGTCA+CGG 0.601402 2:-81859993 MsG0280011276.01.T01:three_prime_UTR
TTAGCATGTCAAACAACTGT+GGG 0.604116 2:-81862610 MsG0280011276.01.T01:CDS
AGCACATGAGGAAATGCACT+TGG 0.606055 2:-81861813 MsG0280011276.01.T01:three_prime_UTR
CCAACCCGAAGGTCACGGCT+GGG 0.609276 2:-81859988 MsG0280011276.01.T01:three_prime_UTR
TACATTGGAAATAAGTACAA+AGG 0.610804 2:-81861852 MsG0280011276.01.T01:three_prime_UTR
TTGTGCTACATGTATGGTAG+AGG 0.614537 2:-81862975 MsG0280011276.01.T01:intron
AAACCGTCCTAGCTATCACC+AGG 0.614689 2:+81862072 None:intergenic
AGAACCAAAATTAGAGCAGT+CGG 0.615630 2:-81863446 MsG0280011276.01.T01:CDS
CCAGAAGCAACACTGTGGAT+AGG 0.616969 2:-81860221 MsG0280011276.01.T01:three_prime_UTR
TGGTTGAGGTAAATGACACT+TGG 0.617626 2:-81861779 MsG0280011276.01.T01:three_prime_UTR
TGGTCCTGCAGCTAAGATGT+TGG 0.619690 2:-81860384 MsG0280011276.01.T01:three_prime_UTR
ACTTGATTCAAACTCGACCA+TGG 0.622490 2:-81861956 MsG0280011276.01.T01:three_prime_UTR
ACAAATGCAAAACCTATAGA+GGG 0.622761 2:+81863371 None:intergenic
GTTGGAGCCAACATATCTGG+TGG 0.627384 2:+81859956 MsG0280011277.01.T01:CDS
AGTAATATAATATATTATGT+GGG 0.630788 2:-81861065 MsG0280011276.01.T01:three_prime_UTR
TCCCCTAATAGCCAACCCGA+AGG 0.632436 2:-81859999 MsG0280011276.01.T01:three_prime_UTR
GACTCAGCAGACTCTTTGTG+AGG 0.642468 2:-81862374 MsG0280011276.01.T01:exon
GGACAGATCACTATCCTCAC+CGG 0.642814 2:+81860019 MsG0280011277.01.T01:CDS
GTGCATTATCGTACAGCTTG+TGG 0.644594 2:-81863170 MsG0280011276.01.T01:CDS
CAACAATTACCAGAGTGGAA+AGG 0.648231 2:-81862428 MsG0280011276.01.T01:CDS
AAATGCAACGATTGATCACA+AGG 0.650416 2:+81861893 None:intergenic
TGAAGCAGATTCTACAGGGG+TGG 0.651914 2:-81862587 MsG0280011276.01.T01:intron
ATCCATGCAACCCAAATGGG+TGG 0.652091 2:+81861031 None:intergenic
ATGCAAAACCTATAGAGGGA+GGG 0.653145 2:+81863375 None:intergenic
GAGACGTGTGAATGCATTAG+GGG 0.653996 2:+81863517 None:intergenic
AATGCAAAACCTATAGAGGG+AGG 0.655010 2:+81863374 None:intergenic
ATTAGCATGTCAAACAACTG+TGG 0.658456 2:-81862611 MsG0280011276.01.T01:CDS
ATTATCGGTGCAAAAGCATG+TGG 0.659618 2:-81861358 MsG0280011276.01.T01:three_prime_UTR
TGATTCAACAATTACCAGAG+TGG 0.670303 2:-81862433 MsG0280011276.01.T01:CDS
CATTATCGTACAGCTTGTGG+TGG 0.680953 2:-81863167 MsG0280011276.01.T01:CDS
TAAACATACCAAGCCTCCTG+TGG 0.686094 2:-81860104 MsG0280011276.01.T01:intron
AGGGTCATTAGAGTCACTAG+TGG 0.691443 2:+81863394 None:intergenic
TCCAGTAGAAGATACCGGTG+AGG 0.726773 2:-81860033 MsG0280011276.01.T01:three_prime_UTR
CAACACCAGAAGCAACACTG+TGG 0.753730 2:-81860226 MsG0280011276.01.T01:three_prime_UTR
GGGTGAAGCAGATTCTACAG+GGG 0.770570 2:-81862590 MsG0280011276.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTATTTATGATATCAAA+AGG - Chr2:81861713-81861732 MsG0280011276.01.T01:intron 10.0%
!! AAGTAATATAATATATTATG+TGG - Chr2:81862238-81862257 MsG0280011276.01.T01:three_prime_UTR 10.0%
!! AGTAATATAATATATTATGT+GGG - Chr2:81862239-81862258 MsG0280011276.01.T01:three_prime_UTR 10.0%
!! TATTAATGTAAATATAATTG+TGG - Chr2:81861744-81861763 MsG0280011276.01.T01:intron 10.0%
!!! ATTTTTTTTAATTTGCTATT+AGG - Chr2:81860433-81860452 MsG0280011276.01.T01:three_prime_UTR 10.0%
!!! TTTTATTTTTAAGCAATAAT+TGG - Chr2:81860240-81860259 MsG0280011276.01.T01:three_prime_UTR 10.0%
!! CAGATTAGAAATTAATAAAA+TGG - Chr2:81860774-81860793 MsG0280011276.01.T01:three_prime_UTR 15.0%
!! TTATCTCATATAATTTGAAT+TGG + Chr2:81859621-81859640 MsG0280011277.01.T01:CDS 15.0%
!!! AATATTTTGTCAGTTAAATA+TGG + Chr2:81862066-81862085 None:intergenic 15.0%
!!! ATATTTTGTCAGTTAAATAT+GGG + Chr2:81862065-81862084 None:intergenic 15.0%
!!! GATTATTTTTATCAATTGAT+AGG - Chr2:81862092-81862111 MsG0280011276.01.T01:three_prime_UTR 15.0%
!!! TTCAATGAAATATTTTATCA+AGG - Chr2:81863566-81863585 MsG0280011276.01.T01:five_prime_UTR 15.0%
!! AACTATTACACTAAAAATGT+AGG + Chr2:81861318-81861337 None:intergenic 20.0%
!! AAGTAATAAAATGTATTGAG+TGG - Chr2:81861868-81861887 MsG0280011276.01.T01:three_prime_UTR 20.0%
!! AATTATCATAACATTTGGAT+TGG + Chr2:81863033-81863052 None:intergenic 20.0%
!! ACAGAAATTATCATAACATT+TGG + Chr2:81863038-81863057 None:intergenic 20.0%
!! ACTATTACACTAAAAATGTA+GGG + Chr2:81861317-81861336 None:intergenic 20.0%
!! AGTAATAAAATGTATTGAGT+GGG - Chr2:81861869-81861888 MsG0280011276.01.T01:three_prime_UTR 20.0%
!! ATTTATGTTGAGCAATATAT+TGG - Chr2:81860819-81860838 MsG0280011276.01.T01:three_prime_UTR 20.0%
!! TAATTCTACTTATATCTAGT+TGG - Chr2:81860027-81860046 MsG0280011276.01.T01:three_prime_UTR 20.0%
!!! AATTAATCTCTAATGTTTTG+TGG - Chr2:81860076-81860095 MsG0280011276.01.T01:three_prime_UTR 20.0%
!!! AGCAAAAATACACATTTTAT+TGG - Chr2:81860381-81860400 MsG0280011276.01.T01:three_prime_UTR 20.0%
!!! ATTGTTATTGTAAGATAAGT+GGG - Chr2:81862137-81862156 MsG0280011276.01.T01:three_prime_UTR 20.0%
!!! GCAAAAATACACATTTTATT+GGG - Chr2:81860382-81860401 MsG0280011276.01.T01:three_prime_UTR 20.0%
!!! GTTAGTACTACTAATTTTTT+GGG - Chr2:81860739-81860758 MsG0280011276.01.T01:three_prime_UTR 20.0%
!!! TATTGTTATTGTAAGATAAG+TGG - Chr2:81862136-81862155 MsG0280011276.01.T01:three_prime_UTR 20.0%
!!! TTGATGTTTAAAATTCGAAA+AGG - Chr2:81863152-81863171 MsG0280011276.01.T01:CDS 20.0%
! AAATAACAAAGTTGGAGTTA+TGG + Chr2:81863497-81863516 None:intergenic 25.0%
! AACCAAATGTTTACATTCAA+AGG - Chr2:81862628-81862647 MsG0280011276.01.T01:CDS 25.0%
! AAGAAGAAAAAACTAACCAT+AGG - Chr2:81863658-81863677 MsG0280011276.01.T01:five_prime_UTR 25.0%
! AAGAGAAAGAAAAACTTAAG+AGG - Chr2:81860495-81860514 MsG0280011276.01.T01:three_prime_UTR 25.0%
! AATTTAACAAAATTCTACCC+TGG + Chr2:81860293-81860312 MsG0280011277.01.T01:CDS 25.0%
! ACATGAATGGAAATATGAAA+AGG - Chr2:81860899-81860918 MsG0280011276.01.T01:three_prime_UTR 25.0%
! AGAGAAAGAAAAACTTAAGA+GGG - Chr2:81860496-81860515 MsG0280011276.01.T01:three_prime_UTR 25.0%
! AGTAGTAAAACTTAACAAAG+TGG - Chr2:81862026-81862045 MsG0280011276.01.T01:three_prime_UTR 25.0%
! AGTTGAGTGGTTTAAATAAT+TGG - Chr2:81861837-81861856 MsG0280011276.01.T01:three_prime_UTR 25.0%
! ATAATTGTGGTGTATATAGT+GGG - Chr2:81861757-81861776 MsG0280011276.01.T01:intron 25.0%
! ATCCTTTGAATGTAAACATT+TGG + Chr2:81862633-81862652 None:intergenic 25.0%
! ATTTAGAAAATGTAGTTGAG+TGG - Chr2:81861824-81861843 MsG0280011276.01.T01:three_prime_UTR 25.0%
! CTATTACACTAAAAATGTAG+GGG + Chr2:81861316-81861335 None:intergenic 25.0%
! CTTTATAGAAACCAAAGAAT+TGG - Chr2:81860668-81860687 MsG0280011276.01.T01:three_prime_UTR 25.0%
! GTAATAAAATGTATTGAGTG+GGG - Chr2:81861870-81861889 MsG0280011276.01.T01:three_prime_UTR 25.0%
! GTTAGTGAGATAATTACATA+AGG + Chr2:81860212-81860231 MsG0280011277.01.T01:intron 25.0%
! GTTGAGTGGTTTAAATAATT+GGG - Chr2:81861838-81861857 MsG0280011276.01.T01:three_prime_UTR 25.0%
! TACATTGGAAATAAGTACAA+AGG - Chr2:81861452-81861471 MsG0280011276.01.T01:intron 25.0%
! TATAATTGTGGTGTATATAG+TGG - Chr2:81861756-81861775 MsG0280011276.01.T01:intron 25.0%
! TATGTTGCAAATAACAAAGT+TGG + Chr2:81863505-81863524 None:intergenic 25.0%
! TGTTCATGAAACATTAATAG+AGG + Chr2:81862600-81862619 None:intergenic 25.0%
!! AAGATCTAGTAACAATTTTC+TGG + Chr2:81861384-81861403 None:intergenic 25.0%
!! AATTTTGTTAAATTGTGGAG+GGG - Chr2:81860299-81860318 MsG0280011276.01.T01:three_prime_UTR 25.0%
!! ACTCTTTCATAACTCTAAAA+TGG + Chr2:81861795-81861814 None:intergenic 25.0%
!! AGAATTTTGTTAAATTGTGG+AGG - Chr2:81860297-81860316 MsG0280011276.01.T01:three_prime_UTR 25.0%
!! GAATTTTGTTAAATTGTGGA+GGG - Chr2:81860298-81860317 MsG0280011276.01.T01:three_prime_UTR 25.0%
!! GGTAGAATTTTGTTAAATTG+TGG - Chr2:81860294-81860313 MsG0280011276.01.T01:three_prime_UTR 25.0%
!! GTATTACTTTAGAAGTTTCA+TGG - Chr2:81863599-81863618 MsG0280011276.01.T01:five_prime_UTR 25.0%
!!! AGCAAGGATATTTAACTTTT+AGG - Chr2:81861614-81861633 MsG0280011276.01.T01:intron 25.0%
!!! AGTGATTTTTGATTTGATTG+AGG + Chr2:81862735-81862754 None:intergenic 25.0%
!!! ATTTTAGAGTTATGAAAGAG+TGG - Chr2:81861794-81861813 MsG0280011276.01.T01:three_prime_UTR 25.0%
!!! ATTTTGTTGTTGATTTTTCC+AGG - Chr2:81860272-81860291 MsG0280011276.01.T01:three_prime_UTR 25.0%
!!! CATGCAACTTTTTCTATAAA+AGG + Chr2:81861118-81861137 None:intergenic 25.0%
!!! CTCTTTCATAACTCTAAAAT+GGG + Chr2:81861794-81861813 None:intergenic 25.0%
!!! GGTTAGTACTACTAATTTTT+TGG - Chr2:81860738-81860757 MsG0280011276.01.T01:three_prime_UTR 25.0%
!!! GTACAAAGTTTTTAAGTGTT+TGG - Chr2:81863468-81863487 MsG0280011276.01.T01:CDS 25.0%
!!! TTTTGTTGTTGATTTTTCCA+GGG - Chr2:81860273-81860292 MsG0280011276.01.T01:three_prime_UTR 25.0%
AAAAAACTAACCATAGGCTA+TGG - Chr2:81863664-81863683 MsG0280011276.01.T01:five_prime_UTR 30.0%
AAAAATGTAGGGGTAAAGAT+TGG + Chr2:81861306-81861325 None:intergenic 30.0%
AACTAGTGTTATGTTGTTGA+AGG + Chr2:81859721-81859740 MsG0280011277.01.T01:intron 30.0%
AATCAAAAATCACTAGCCAA+AGG - Chr2:81862741-81862760 MsG0280011276.01.T01:intron 30.0%
ACAAATGCAAAACCTATAGA+GGG + Chr2:81859936-81859955 MsG0280011277.01.T01:CDS 30.0%
ACAATCAAACCAATAGCAAT+TGG - Chr2:81862948-81862967 MsG0280011276.01.T01:intron 30.0%
ACATAAGATACAGTCAGTTA+TGG - Chr2:81863124-81863143 MsG0280011276.01.T01:CDS 30.0%
ATAACTTCAGCAAAACTCAA+AGG + Chr2:81861683-81861702 None:intergenic 30.0%
ATCCTAAGAAAGGATCATTA+GGG + Chr2:81862983-81863002 None:intergenic 30.0%
CATCTATTTCACAAATTTGC+AGG - Chr2:81862549-81862568 MsG0280011276.01.T01:intron 30.0%
GATTCTAACATTGAACTCTA+TGG - Chr2:81860185-81860204 MsG0280011276.01.T01:intron 30.0%
GGTCATGTATAATCTTGATT+TGG - Chr2:81863620-81863639 MsG0280011276.01.T01:five_prime_UTR 30.0%
GTACTTATTTCCAATGTACA+AGG + Chr2:81861450-81861469 None:intergenic 30.0%
GTGCATAAATAGTGAAAAAG+AGG - Chr2:81862328-81862347 MsG0280011276.01.T01:three_prime_UTR 30.0%
TAATTGTGGTGTATATAGTG+GGG - Chr2:81861758-81861777 MsG0280011276.01.T01:intron 30.0%
TGTGTTCCTCCATAATAAAA+AGG + Chr2:81862690-81862709 None:intergenic 30.0%
TTATTTCCAATGTACAAGGT+TGG + Chr2:81861446-81861465 None:intergenic 30.0%
TTCCTCCATAATAAAAAGGA+AGG + Chr2:81862686-81862705 None:intergenic 30.0%
! AATACACCATTTTCTTGTAG+TGG + Chr2:81861278-81861297 None:intergenic 30.0%
! ATTTTCATTCCATGTGATGT+AGG - Chr2:81860845-81860864 MsG0280011276.01.T01:three_prime_UTR 30.0%
! ATTTTGTTAAATTGTGGAGG+GGG - Chr2:81860300-81860319 MsG0280011276.01.T01:three_prime_UTR 30.0%
! GCTTTCCTTCCTTTTTATTA+TGG - Chr2:81862678-81862697 MsG0280011276.01.T01:intron 30.0%
! TTCCTTCCTTTTTATTATGG+AGG - Chr2:81862681-81862700 MsG0280011276.01.T01:intron 30.0%
! TTTCTGACACGTTTTCATTT+GGG + Chr2:81861981-81862000 None:intergenic 30.0%
! TTTTGTCAGTTAAATATGGG+TGG + Chr2:81862062-81862081 None:intergenic 30.0%
!! ACTCCTCTAAAACTCTAAAA+TGG + Chr2:81862165-81862184 None:intergenic 30.0%
!! ATTGCTATTGGTTTGATTGT+TGG + Chr2:81862948-81862967 None:intergenic 30.0%
!! ATTTGCTATTAGGTTCTTGA+AGG - Chr2:81860443-81860462 MsG0280011276.01.T01:three_prime_UTR 30.0%
!! CTCCTCTAAAACTCTAAAAT+GGG + Chr2:81862164-81862183 None:intergenic 30.0%
!! GATATTTAACTTTTAGGCAG+TGG - Chr2:81861620-81861639 MsG0280011276.01.T01:intron 30.0%
!! TGCTCTAAGAGCATAATTAT+CGG - Chr2:81861931-81861950 MsG0280011276.01.T01:three_prime_UTR 30.0%
!!! ATTTTAGAGTTTTAGAGGAG+TGG - Chr2:81862164-81862183 MsG0280011276.01.T01:three_prime_UTR 30.0%
!!! TGGTCTGAATTTTTTATGTG+AGG + Chr2:81859820-81859839 MsG0280011277.01.T01:intron 30.0%
AAATGCAACGATTGATCACA+AGG + Chr2:81861414-81861433 None:intergenic 35.0%
AAGAGCAAAACCATGACAAA+CGG - Chr2:81863386-81863405 MsG0280011276.01.T01:CDS 35.0%
AATATCCTTGCTAGTGTCTT+TGG + Chr2:81861606-81861625 None:intergenic 35.0%
ACAATTGCACCAATTGCTAT+TGG + Chr2:81862960-81862979 None:intergenic 35.0%
ACCAGCAAAAACAAAGATCA+AGG - Chr2:81863697-81863716 MsG0280011276.01.T01:five_prime_UTR 35.0%
ACCATAACAACTGGATCTAT+TGG + Chr2:81862839-81862858 None:intergenic 35.0%
AGAACCAAAATTAGAGCAGT+CGG - Chr2:81859858-81859877 MsG0280011276.01.T01:intron 35.0%
AGAGTTATGAAAGAGTGGTA+TGG - Chr2:81861799-81861818 MsG0280011276.01.T01:three_prime_UTR 35.0%
ATAAGCCAAAATAGCACATG+AGG - Chr2:81861479-81861498 MsG0280011276.01.T01:intron 35.0%
ATAGAAGAAGACTTAGTCCA+AGG + Chr2:81862435-81862454 None:intergenic 35.0%
ATATCCTTGCTAGTGTCTTT+GGG + Chr2:81861605-81861624 None:intergenic 35.0%
ATGTGAAATGTGAACTCTTG+TGG - Chr2:81860611-81860630 MsG0280011276.01.T01:three_prime_UTR 35.0%
ATTAGCATGTCAAACAACTG+TGG - Chr2:81860693-81860712 MsG0280011276.01.T01:three_prime_UTR 35.0%
CACTATTTATGCACAACTCA+AGG + Chr2:81862322-81862341 None:intergenic 35.0%
CATGCTAATCTCCAATTCTT+TGG + Chr2:81860682-81860701 None:intergenic 35.0%
CCATAACAACTGGATCTATT+GGG + Chr2:81862838-81862857 None:intergenic 35.0%
GAAGCTTAGGAACATAATGT+TGG - Chr2:81860163-81860182 MsG0280011276.01.T01:intron 35.0%
GACAAATGCAAAACCTATAG+AGG + Chr2:81859937-81859956 MsG0280011277.01.T01:CDS 35.0%
GATCCTAAGAAAGGATCATT+AGG + Chr2:81862984-81863003 None:intergenic 35.0%
GGATTTCTGTGAACAATACT+TGG - Chr2:81862570-81862589 MsG0280011276.01.T01:intron 35.0%
GTCAGAAAGCAACTGATATT+TGG - Chr2:81861993-81862012 MsG0280011276.01.T01:three_prime_UTR 35.0%
GTGAAAAAGAGGATCAATAG+TGG - Chr2:81862339-81862358 MsG0280011276.01.T01:three_prime_UTR 35.0%
TGATTCAACAATTACCAGAG+TGG - Chr2:81860871-81860890 MsG0280011276.01.T01:three_prime_UTR 35.0%
TGCACTTGGCATAACATAAT+TGG - Chr2:81861505-81861524 MsG0280011276.01.T01:intron 35.0%
TGGCATAACATAATTGGTTG+AGG - Chr2:81861511-81861530 MsG0280011276.01.T01:intron 35.0%
TTAGCATGTCAAACAACTGT+GGG - Chr2:81860694-81860713 MsG0280011276.01.T01:three_prime_UTR 35.0%
! CTTTCTGACACGTTTTCATT+TGG + Chr2:81861982-81862001 None:intergenic 35.0%
! GATCAATCGTTGCATTTTGT+AGG - Chr2:81861417-81861436 MsG0280011276.01.T01:intron 35.0%
! TCTCTGAATCCTTCTTTTCA+GGG + Chr2:81859890-81859909 MsG0280011277.01.T01:CDS 35.0%
! TGTTGTTGAAGGATTTTGCA+TGG + Chr2:81859710-81859729 MsG0280011277.01.T01:intron 35.0%
!! CTTGTAAAGAGTGTTGTGTT+TGG + Chr2:81859840-81859859 MsG0280011277.01.T01:intron 35.0%
!! GATTCTAAGAGCACCAATAT+CGG - Chr2:81861553-81861572 MsG0280011276.01.T01:intron 35.0%
!!! ACCTTGATCTTTGTTTTTGC+TGG + Chr2:81863701-81863720 None:intergenic 35.0%
!!! ATCTTTGTTTTTGCTGGTGT+TGG + Chr2:81863695-81863714 None:intergenic 35.0%
!!! CATTTCCTCATGTGCTATTT+TGG + Chr2:81861487-81861506 None:intergenic 35.0%
!!! CTTTTTGTTGCTGTTTCTGT+TGG + Chr2:81863369-81863388 None:intergenic 35.0%
!!! GACCCATTTTAGAGTTTTAG+AGG - Chr2:81862159-81862178 MsG0280011276.01.T01:three_prime_UTR 35.0%
AACAACTGGATCTATTGGGT+TGG + Chr2:81862834-81862853 None:intergenic 40.0%
AATCTTGTGCTTCTTGATCC+TGG - Chr2:81861214-81861233 MsG0280011276.01.T01:three_prime_UTR 40.0%
AATGCAAAACCTATAGAGGG+AGG + Chr2:81859933-81859952 MsG0280011277.01.T01:CDS 40.0%
ACAACTTCTTGGTTCCATAG+TGG + Chr2:81863247-81863266 None:intergenic 40.0%
ACCCAAATGGGTGGTATAAA+TGG + Chr2:81862267-81862286 None:intergenic 40.0%
ACTCCTATGGGTGGTATAAA+TGG + Chr2:81861897-81861916 None:intergenic 40.0%
ACTTGATTCAAACTCGACCA+TGG - Chr2:81861348-81861367 MsG0280011276.01.T01:three_prime_UTR 40.0%
AGAGACGTGTGAATGCATTA+GGG + Chr2:81859791-81859810 MsG0280011277.01.T01:intron 40.0%
AGGATTCCAACCTTGTACAT+TGG - Chr2:81861437-81861456 MsG0280011276.01.T01:intron 40.0%
ATCGTTGCTCTGTAATGCTA+CGG - Chr2:81861655-81861674 MsG0280011276.01.T01:intron 40.0%
ATGCAAAACCTATAGAGGGA+GGG + Chr2:81859932-81859951 MsG0280011277.01.T01:CDS 40.0%
ATGGTCGAGTTTGAATCAAG+TGG + Chr2:81861349-81861368 None:intergenic 40.0%
ATTTATACCACCCATAGGAG+TGG - Chr2:81861896-81861915 MsG0280011276.01.T01:three_prime_UTR 40.0%
CAACAATTACCAGAGTGGAA+AGG - Chr2:81860876-81860895 MsG0280011276.01.T01:three_prime_UTR 40.0%
CACCAATAGTCAACCGATAT+TGG + Chr2:81861569-81861588 None:intergenic 40.0%
CCCAAATGGGTGGTATAAAT+GGG + Chr2:81862266-81862285 None:intergenic 40.0%
CCCAATAGATCCAGTTGTTA+TGG - Chr2:81862835-81862854 MsG0280011276.01.T01:CDS 40.0%
CCCATTTATACCACCCATTT+GGG - Chr2:81862263-81862282 MsG0280011276.01.T01:three_prime_UTR 40.0%
CCTTGTCCACTACAAGAAAA+TGG - Chr2:81861269-81861288 MsG0280011276.01.T01:three_prime_UTR 40.0%
CTATTAGGTTCTTGAAGGCA+AGG - Chr2:81860448-81860467 MsG0280011276.01.T01:three_prime_UTR 40.0%
GAATCACAACCTACATCACA+TGG + Chr2:81860857-81860876 None:intergenic 40.0%
GTCCCTAATGATCCTTTCTT+AGG - Chr2:81862978-81862997 MsG0280011276.01.T01:CDS 40.0%
TACTGGATTGCACAACTTCT+TGG + Chr2:81863258-81863277 None:intergenic 40.0%
TCCCATTTATACCACCCATT+TGG - Chr2:81862262-81862281 MsG0280011276.01.T01:three_prime_UTR 40.0%
TGCAATCCAGTAGAAGATAC+CGG - Chr2:81863266-81863285 MsG0280011276.01.T01:intron 40.0%
TGCATGGAATTTGAGCTTAG+TGG + Chr2:81859694-81859713 MsG0280011277.01.T01:intron 40.0%
TGGAACTTGTGCTACATGTA+TGG - Chr2:81860323-81860342 MsG0280011276.01.T01:three_prime_UTR 40.0%
TGGAGTGTGTGTTTCATTTG+TGG + Chr2:81859674-81859693 MsG0280011277.01.T01:intron 40.0%
TGGTTGAGGTAAATGACACT+TGG - Chr2:81861525-81861544 MsG0280011276.01.T01:intron 40.0%
TTCATTGAACCACCAGAGAA+TGG - Chr2:81862900-81862919 MsG0280011276.01.T01:intron 40.0%
TTGTGCTACATGTATGGTAG+AGG - Chr2:81860329-81860348 MsG0280011276.01.T01:three_prime_UTR 40.0%
! AATCACTAGCCAAAGGTACA+TGG - Chr2:81862748-81862767 MsG0280011276.01.T01:intron 40.0%
! ATTATCGGTGCAAAAGCATG+TGG - Chr2:81861946-81861965 MsG0280011276.01.T01:three_prime_UTR 40.0%
! CACCAATATCGGTTGACTAT+TGG - Chr2:81861564-81861583 MsG0280011276.01.T01:intron 40.0%
! GGTACTCTCTTTGAGAGTAA+TGG - Chr2:81862402-81862421 MsG0280011276.01.T01:CDS 40.0%
! GTCTCTGAATCCTTCTTTTC+AGG + Chr2:81859891-81859910 MsG0280011277.01.T01:CDS 40.0%
! TGTATATAGTGGGGTTTCGT+GGG - Chr2:81861767-81861786 MsG0280011276.01.T01:three_prime_UTR 40.0%
! TTTGCAGCTAAGTTGACATC+AGG + Chr2:81863447-81863466 None:intergenic 40.0%
! TTTTCCCAAAGACACTAGCA+AGG - Chr2:81861598-81861617 MsG0280011276.01.T01:intron 40.0%
!! ACTCTCAAAGAGAGTACCAA+AGG + Chr2:81862400-81862419 None:intergenic 40.0%
!! CATTAGGGGTTAGTTTGAGT+TGG + Chr2:81859776-81859795 MsG0280011277.01.T01:intron 40.0%
!! CTCTCAAAGAGAGTACCAAA+GGG + Chr2:81862399-81862418 None:intergenic 40.0%
!! GATAGCTAGGACGGTTTTAT+AGG - Chr2:81861238-81861257 MsG0280011276.01.T01:three_prime_UTR 40.0%
!! TATTGGGTTGGACCTCTTAT+TGG + Chr2:81862822-81862841 None:intergenic 40.0%
!!! AGAGTTTTAGAGGAGTGGTA+TGG - Chr2:81862169-81862188 MsG0280011276.01.T01:three_prime_UTR 40.0%
!!! CCATTTTCTTGTAGTGGACA+AGG + Chr2:81861272-81861291 None:intergenic 40.0%
ACACATCCATACCACTCCTA+TGG + Chr2:81861910-81861929 None:intergenic 45.0%
ACAGCAGCTGATCCTAAGAA+AGG + Chr2:81862993-81863012 None:intergenic 45.0%
AGAGTAATGGCTTGAGTCCT+TGG - Chr2:81862415-81862434 MsG0280011276.01.T01:CDS 45.0%
AGCACATGAGGAAATGCACT+TGG - Chr2:81861491-81861510 MsG0280011276.01.T01:intron 45.0%
AGGGTCATTAGAGTCACTAG+TGG + Chr2:81859913-81859932 MsG0280011277.01.T01:CDS 45.0%
ATGAATCCGGCACGTTCATT+TGG + Chr2:81862885-81862904 None:intergenic 45.0%
CACATCCATACCACTCCTAT+GGG + Chr2:81861909-81861928 None:intergenic 45.0%
CACATCCATGCAACCCAAAT+GGG + Chr2:81862279-81862298 None:intergenic 45.0%
CAGAGTGGAAAGGACATGAA+TGG - Chr2:81860886-81860905 MsG0280011276.01.T01:three_prime_UTR 45.0%
CATTATCGTACAGCTTGTGG+TGG - Chr2:81860137-81860156 MsG0280011276.01.T01:intron 45.0%
CATTCATGTCCTTTCCACTC+TGG + Chr2:81860888-81860907 None:intergenic 45.0%
CTCTGGTGGTTCAATGAATC+CGG + Chr2:81862898-81862917 None:intergenic 45.0%
GACATGTCCACCAGATATGT+TGG - Chr2:81863341-81863360 MsG0280011276.01.T01:intron 45.0%
GAGACGTGTGAATGCATTAG+GGG + Chr2:81859790-81859809 MsG0280011277.01.T01:intron 45.0%
GAGAGACGTGTGAATGCATT+AGG + Chr2:81859792-81859811 MsG0280011277.01.T01:intron 45.0%
GCTGTACGATAATGCACATC+TGG + Chr2:81860131-81860150 MsG0280011277.01.T01:intron 45.0%
GGTCCATTTATACCACCCAT+AGG - Chr2:81861891-81861910 MsG0280011276.01.T01:three_prime_UTR 45.0%
GTGCATTATCGTACAGCTTG+TGG - Chr2:81860134-81860153 MsG0280011276.01.T01:intron 45.0%
GTGGTGACTACCATAACAAC+TGG + Chr2:81862848-81862867 None:intergenic 45.0%
TAAACATACCAAGCCTCCTG+TGG - Chr2:81863200-81863219 MsG0280011276.01.T01:CDS 45.0%
TAGTCACCACTTACAACTGC+AGG - Chr2:81862858-81862877 MsG0280011276.01.T01:intron 45.0%
TCTAATGACCCTCCCTCTAT+AGG - Chr2:81859921-81859940 MsG0280011276.01.T01:three_prime_UTR 45.0%
TCTGTTGGAGCCAACATATC+TGG + Chr2:81863354-81863373 None:intergenic 45.0%
TCTTGATCCTGGTGATAGCT+AGG - Chr2:81861225-81861244 MsG0280011276.01.T01:three_prime_UTR 45.0%
TCTTTCTCTTTGTCAGTGCG+AGG + Chr2:81860485-81860504 MsG0280011277.01.T01:CDS 45.0%
TGAATCCGGCACGTTCATTT+GGG + Chr2:81862884-81862903 None:intergenic 45.0%
TGGGTGAAGCAGATTCTACA+GGG - Chr2:81860713-81860732 MsG0280011276.01.T01:three_prime_UTR 45.0%
TTGTTAAATTGTGGAGGGGG+TGG - Chr2:81860303-81860322 MsG0280011276.01.T01:three_prime_UTR 45.0%
TTTCTCCTCAAGTTTGCCAC+AGG + Chr2:81863219-81863238 None:intergenic 45.0%
TTTCTTAGGATCAGCTGCTG+TGG - Chr2:81862992-81863011 MsG0280011276.01.T01:CDS 45.0%
! GTGTATATAGTGGGGTTTCG+TGG - Chr2:81861766-81861785 MsG0280011276.01.T01:three_prime_UTR 45.0%
! TAGTCTGTGTTGCTACCAGA+TGG - Chr2:81860101-81860120 MsG0280011276.01.T01:intron 45.0%
! TTTCTGGTAGCTCAGTTCCA+TGG + Chr2:81861368-81861387 None:intergenic 45.0%
!! ACCTCTTATTGGTGGTGGTT+TGG + Chr2:81862811-81862830 None:intergenic 45.0%
!! TAGGGGTTAGTTTGAGTTGG+AGG + Chr2:81859773-81859792 MsG0280011277.01.T01:intron 45.0%
!!! AGTGCCGACTGCTCTAATTT+TGG + Chr2:81859865-81859884 MsG0280011277.01.T01:intron 45.0%
!!! ATTTTTTTATTATACTATTT+AGG - Chr2:81863533-81863552 MsG0280011276.01.T01:CDS 5.0%
AAACCGTCCTAGCTATCACC+AGG + Chr2:81861235-81861254 None:intergenic 50.0%
AAGTCTCTCCTCTCTCCCTT+TGG - Chr2:81862381-81862400 MsG0280011276.01.T01:CDS 50.0%
AATAGCCAACCCGAAGGTCA+CGG - Chr2:81863311-81863330 MsG0280011276.01.T01:intron 50.0%
ATCCATACCACTCCTATGGG+TGG + Chr2:81861906-81861925 None:intergenic 50.0%
ATCCATGCAACCCAAATGGG+TGG + Chr2:81862276-81862295 None:intergenic 50.0%
CAACACCAGAAGCAACACTG+TGG - Chr2:81863078-81863097 MsG0280011276.01.T01:intron 50.0%
CCACATCCATGCAACCCAAA+TGG + Chr2:81862280-81862299 None:intergenic 50.0%
CCAGAAGCAACACTGTGGAT+AGG - Chr2:81863083-81863102 MsG0280011276.01.T01:intron 50.0%
GACTCAGCAGACTCTTTGTG+AGG - Chr2:81860930-81860949 MsG0280011276.01.T01:three_prime_UTR 50.0%
GATCCTGGTGATAGCTAGGA+CGG - Chr2:81861229-81861248 MsG0280011276.01.T01:three_prime_UTR 50.0%
GCAACTGCTACTAATCCAGC+AGG - Chr2:81863408-81863427 MsG0280011276.01.T01:CDS 50.0%
GCCAAACCACCACCAATAAG+AGG - Chr2:81862807-81862826 MsG0280011276.01.T01:intron 50.0%
GGACAGATCACTATCCTCAC+CGG + Chr2:81863288-81863307 None:intergenic 50.0%
GGGTGAAGCAGATTCTACAG+GGG - Chr2:81860714-81860733 MsG0280011276.01.T01:three_prime_UTR 50.0%
GTGGGTGAAGCAGATTCTAC+AGG - Chr2:81860712-81860731 MsG0280011276.01.T01:three_prime_UTR 50.0%
GTTGGACCTCTTATTGGTGG+TGG + Chr2:81862816-81862835 None:intergenic 50.0%
GTTGGAGCCAACATATCTGG+TGG + Chr2:81863351-81863370 None:intergenic 50.0%
TACCACCCATAGGAGTGGTA+TGG - Chr2:81861901-81861920 MsG0280011276.01.T01:three_prime_UTR 50.0%
TCCAGTAGAAGATACCGGTG+AGG - Chr2:81863271-81863290 MsG0280011276.01.T01:intron 50.0%
TCCTCACCGGTATCTTCTAC+TGG + Chr2:81863275-81863294 None:intergenic 50.0%
TGAAGCAGATTCTACAGGGG+TGG - Chr2:81860717-81860736 MsG0280011276.01.T01:three_prime_UTR 50.0%
TGCACATCTGGTGTTCCATC+TGG + Chr2:81860119-81860138 MsG0280011277.01.T01:intron 50.0%
TGGTCCTGCAGCTAAGATGT+TGG - Chr2:81862920-81862939 MsG0280011276.01.T01:intron 50.0%
TTAGCTGCAGGACCATTCTC+TGG + Chr2:81862915-81862934 None:intergenic 50.0%
TTTGGGCCTGCAGTTGTAAG+TGG + Chr2:81862867-81862886 None:intergenic 50.0%
! AGCCAAAGGTACATGGTCTG+AGG - Chr2:81862755-81862774 MsG0280011276.01.T01:intron 50.0%
! GAGGAGAAAGCATGCCACTA+TGG - Chr2:81863230-81863249 MsG0280011276.01.T01:intron 50.0%
! GCCAAAGGTACATGGTCTGA+GGG - Chr2:81862756-81862775 MsG0280011276.01.T01:intron 50.0%
! GTAGCAGTTGCCGTTTGTCA+TGG + Chr2:81863399-81863418 None:intergenic 50.0%
! GTTGGTTCAGCCATAGCCTA+TGG + Chr2:81863677-81863696 None:intergenic 50.0%
! TGGGTTGGACCTCTTATTGG+TGG + Chr2:81862819-81862838 None:intergenic 50.0%
!! ACCTTCGGGTTGGCTATTAG+GGG + Chr2:81863309-81863328 None:intergenic 50.0%
!! AGAGAGTACCAAAGGGAGAG+AGG + Chr2:81862392-81862411 None:intergenic 50.0%
!! CACAGTGTTGCTTCTGGTGT+TGG + Chr2:81863080-81863099 None:intergenic 50.0%
!! CCATTTGGGTTGCATGGATG+TGG - Chr2:81862277-81862296 MsG0280011276.01.T01:three_prime_UTR 50.0%
!! CCTATCCACAGTGTTGCTTC+TGG + Chr2:81863086-81863105 None:intergenic 50.0%
!! CTTATTGGTGGTGGTTTGGC+TGG + Chr2:81862807-81862826 None:intergenic 50.0%
!! CTTGTGGTGGACAGAAGCTT+AGG - Chr2:81860150-81860169 MsG0280011276.01.T01:intron 50.0%
!! GACCTTCGGGTTGGCTATTA+GGG + Chr2:81863310-81863329 None:intergenic 50.0%
!! GGTTTGGCTGGTGTCATCTA+TGG + Chr2:81862795-81862814 None:intergenic 50.0%
!! TACCACCCATTTGGGTTGCA+TGG - Chr2:81862271-81862290 MsG0280011276.01.T01:three_prime_UTR 50.0%
!! TGACCTTCGGGTTGGCTATT+AGG + Chr2:81863311-81863330 None:intergenic 50.0%
AGCCTCCTGTGGCAAACTTG+AGG - Chr2:81863211-81863230 MsG0280011276.01.T01:intron 55.0%
CAAGTTTGCCACAGGAGGCT+TGG + Chr2:81863211-81863230 None:intergenic 55.0%
CGGCACTGTCCCTGAAAAGA+AGG - Chr2:81859878-81859897 MsG0280011276.01.T01:three_prime_UTR 55.0%
CTCCTCAAGTTTGCCACAGG+AGG + Chr2:81863216-81863235 None:intergenic 55.0%
GCCCTCAGACCATGTACCTT+TGG + Chr2:81862760-81862779 None:intergenic 55.0%
GGTGCCAACATCTTAGCTGC+AGG + Chr2:81862927-81862946 None:intergenic 55.0%
TCCCCTAATAGCCAACCCGA+AGG - Chr2:81863305-81863324 MsG0280011276.01.T01:intron 55.0%
! GTTGCTTCTGGTGTTGGAGC+TGG + Chr2:81863074-81863093 None:intergenic 55.0%
! TCTGGTGTTGGAGCTGGTGA+AGG + Chr2:81863068-81863087 None:intergenic 55.0%
GCAGGCCCAAATGAACGTGC+CGG - Chr2:81862876-81862895 MsG0280011276.01.T01:intron 60.0%
GCTGCAGGACCATTCTCTGG+TGG + Chr2:81862912-81862931 None:intergenic 60.0%
GGTGCAGCTCTTGATCCTGC+TGG + Chr2:81863426-81863445 None:intergenic 60.0%
GTCAACCCAGCCGTGACCTT+CGG + Chr2:81863324-81863343 None:intergenic 60.0%
TCAACCCAGCCGTGACCTTC+GGG + Chr2:81863323-81863342 None:intergenic 60.0%
CCAACCCGAAGGTCACGGCT+GGG - Chr2:81863316-81863335 MsG0280011276.01.T01:intron 65.0%
CCCAGCCGTGACCTTCGGGT+TGG + Chr2:81863319-81863338 None:intergenic 70.0%
GCCAACCCGAAGGTCACGGC+TGG - Chr2:81863315-81863334 MsG0280011276.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 81859604 81863722 81859604 ID=MsG0280011276.01;Name=MsG0280011276.01
Chr2 mRNA 81859604 81863722 81859604 ID=MsG0280011276.01.T01;Parent=MsG0280011276.01;Name=MsG0280011276.01.T01;_AED=0.09;_eAED=0.09;_QI=158|1|1|1|0.62|0.55|9|2085|191
Chr2 exon 81859604 81859646 81859604 ID=MsG0280011276.01.T01:exon:2842;Parent=MsG0280011276.01.T01
Chr2 exon 81859859 81860117 81859859 ID=MsG0280011276.01.T01:exon:2841;Parent=MsG0280011276.01.T01
Chr2 exon 81860215 81861386 81860215 ID=MsG0280011276.01.T01:exon:2840;Parent=MsG0280011276.01.T01
Chr2 exon 81861765 81862459 81861765 ID=MsG0280011276.01.T01:exon:2839;Parent=MsG0280011276.01.T01
Chr2 exon 81862588 81862650 81862588 ID=MsG0280011276.01.T01:exon:2838;Parent=MsG0280011276.01.T01
Chr2 exon 81862809 81862871 81862809 ID=MsG0280011276.01.T01:exon:2837;Parent=MsG0280011276.01.T01
Chr2 exon 81862976 81863032 81862976 ID=MsG0280011276.01.T01:exon:2836;Parent=MsG0280011276.01.T01
Chr2 exon 81863112 81863222 81863112 ID=MsG0280011276.01.T01:exon:2835;Parent=MsG0280011276.01.T01
Chr2 exon 81863367 81863722 81863367 ID=MsG0280011276.01.T01:exon:2834;Parent=MsG0280011276.01.T01
Chr2 five_prime_UTR 81863565 81863722 81863565 ID=MsG0280011276.01.T01:five_prime_utr;Parent=MsG0280011276.01.T01
Chr2 CDS 81863367 81863564 81863367 ID=MsG0280011276.01.T01:cds;Parent=MsG0280011276.01.T01
Chr2 CDS 81863112 81863222 81863112 ID=MsG0280011276.01.T01:cds;Parent=MsG0280011276.01.T01
Chr2 CDS 81862976 81863032 81862976 ID=MsG0280011276.01.T01:cds;Parent=MsG0280011276.01.T01
Chr2 CDS 81862809 81862871 81862809 ID=MsG0280011276.01.T01:cds;Parent=MsG0280011276.01.T01
Chr2 CDS 81862588 81862650 81862588 ID=MsG0280011276.01.T01:cds;Parent=MsG0280011276.01.T01
Chr2 CDS 81862376 81862459 81862376 ID=MsG0280011276.01.T01:cds;Parent=MsG0280011276.01.T01
Chr2 three_prime_UTR 81861765 81862375 81861765 ID=MsG0280011276.01.T01:three_prime_utr;Parent=MsG0280011276.01.T01
Chr2 three_prime_UTR 81860215 81861386 81860215 ID=MsG0280011276.01.T01:three_prime_utr;Parent=MsG0280011276.01.T01
Chr2 three_prime_UTR 81859859 81860117 81859859 ID=MsG0280011276.01.T01:three_prime_utr;Parent=MsG0280011276.01.T01
Chr2 three_prime_UTR 81859604 81859646 81859604 ID=MsG0280011276.01.T01:three_prime_utr;Parent=MsG0280011276.01.T01
Gene Sequence

>MsG0280011276.01.T01

ATGTCACTCCTCCAACTCAAACTAACCCCTAATGCATTCACACGTCTCTCTTCTTCCTCACATAAAAAATTCAGACCAAACACAACACTCTTTACAAGAACCAAAATTAGAGCAGTCGGCACTGTCCCTGAAAAGAAGGATTCAGAGACCACTAGTGACTCTAATGACCCTCCCTCTATAGGTTTTGCATTTGTCAGTTCTGTGTTGCTACCAGATGGAACACCAGATGTGCATTATCGTACAGCTTGTGGTGGACAGAAGCTTAGGAACATAATGTTGGATTCTAACATTGAACTCTATGGACCTTATGGTAGAATTTTGTTAAATTGTGGAGGGGGTGGAACTTGTGCTACATGTATGGTAGAGGTTCTTGAAGGCAAGGAGCTTCTGAGTCCTCGCACTGACAAAGAGAAAGAAAAACTTAAGAGGAAACCAAAGAATTGGAGATTAGCATGTCAAACAACTGTGGGTGAAGCAGATTCTACAGGGGTGGTTGTGATTCAACAATTACCAGAGTGGAAAGGACATGAATGGAAATATGAAAAGGATGATGATGACTCAGCAGACTCTTTGTGA

Protein sequence

>MsG0280011276.01.T01

MSLLQLKLTPNAFTRLSSSSHKKFRPNTTLFTRTKIRAVGTVPEKKDSETTSDSNDPPSIGFAFVSSVLLPDGTPDVHYRTACGGQKLRNIMLDSNIELYGPYGRILLNCGGGGTCATCMVEVLEGKELLSPRTDKEKEKLKRKPKNWRLACQTTVGEADSTGVVVIQQLPEWKGHEWKYEKDDDDSADSL*