AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880042043.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042043.01.T01 MTR_8g010120 98.837 344 4 0 1 344 1 344 0.0 707
MsG0880042043.01.T01 MTR_8g010120 98.538 342 5 0 3 344 43 384 0.0 703
MsG0880042043.01.T01 MTR_4g010000 35.581 267 161 8 73 332 113 375 9.23e-43 152
MsG0880042043.01.T01 MTR_4g010000 40.476 126 70 4 73 193 113 238 8.58e-24 99.0
MsG0880042043.01.T01 MTR_2g090240 24.161 298 171 10 89 344 28 312 7.26e-16 77.8
MsG0880042043.01.T01 MTR_5g056200 21.678 286 176 8 85 342 74 339 8.86e-12 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042043.01.T01 AT4G12830 75.882 340 82 0 3 342 50 389 0.0 556
MsG0880042043.01.T01 AT1G52510 35.185 270 158 9 73 332 110 372 2.39e-41 149
MsG0880042043.01.T01 AT1G52510 36.199 221 127 7 119 332 15 228 6.06e-32 120
MsG0880042043.01.T01 AT5G19850 23.264 288 179 8 80 342 88 358 2.58e-15 76.6

Find 114 sgRNAs with CRISPR-Local

Find 279 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATGATATTGCCATTAAAAT+TGG 0.133191 8:-3056296 MsG0880042043.01.T01:three_prime_UTR
GAACTTGGACAACTTATTTA+TGG 0.150873 8:-3056463 MsG0880042043.01.T01:CDS
GACATTTCCCTATCCAAATT+TGG 0.156382 8:+3056254 None:intergenic
CAGATATTCAAGTCCAAATT+TGG 0.165227 8:-3056267 MsG0880042043.01.T01:three_prime_UTR
AGTTTGTGTCTTTGTGTTAA+TGG 0.176812 8:-3060835 MsG0880042043.01.T01:five_prime_UTR
AAGCTACCGGCGATCGTTTC+AGG 0.185171 8:-3059995 MsG0880042043.01.T01:intron
GATAAGCCTCAACCTAAATA+TGG 0.204931 8:-3059158 MsG0880042043.01.T01:CDS
CACCTTTAGGTCTTTCTTCA+TGG 0.215656 8:+3058186 None:intergenic
TAGGTCTTTCTTCATGGTTC+TGG 0.240612 8:+3058192 None:intergenic
GCTTTGTCACTGGCCCTTAA+TGG 0.256586 8:+3058319 None:intergenic
TTGGAACTTCAATAAGCTTA+TGG 0.259244 8:+3057874 None:intergenic
AATCTTCTCCTGGTGTTTGC+TGG 0.286979 8:+3058783 None:intergenic
GTGTAGTCAAACCCATATTT+AGG 0.295962 8:+3059146 None:intergenic
GTTAAAGCTTATTCAATTCC+TGG 0.300530 8:-3060074 MsG0880042043.01.T01:CDS
CCTTGAAAGAAAACGCTTTG+TGG 0.305649 8:+3060899 None:intergenic
AAACCATCACCAACAGAAAT+AGG 0.308975 8:+3060742 None:intergenic
GTTGGTTTGGTTTGGTTGGT+TGG 0.331546 8:+3061001 None:intergenic
TTCTTATCGCAAAGTTCTTC+CGG 0.338122 8:-3059577 MsG0880042043.01.T01:CDS
ATGACCATTCAAGCCTTTCA+TGG 0.356107 8:-3060960 MsG0880042043.01.T01:five_prime_UTR
CTGGCATACTTAACTACAAC+TGG 0.368426 8:+3058802 None:intergenic
GGGTTTGACTACACCCTTGA+TGG 0.373118 8:-3059137 MsG0880042043.01.T01:intron
TGTTCGAACCACTGTATGTT+GGG 0.387902 8:-3057955 MsG0880042043.01.T01:CDS
AGAAGACCCTATCTCATATC+TGG 0.388030 8:-3058244 MsG0880042043.01.T01:CDS
GCTTATTCAATTCCTGGAAC+TGG 0.388136 8:-3060068 MsG0880042043.01.T01:CDS
TGAGTGTTTAGGATCCATTA+AGG 0.388171 8:-3058333 MsG0880042043.01.T01:intron
GATTATCAACACTTCCGCTT+TGG 0.395457 8:+3059719 None:intergenic
AGACAATGTAGGTGGAAGTT+TGG 0.397564 8:+3058471 None:intergenic
ATGATATTGCCATTAAAATT+GGG 0.400879 8:-3056295 MsG0880042043.01.T01:three_prime_UTR
TGAGGAGCCAGATATGAGAT+AGG 0.403625 8:+3058237 None:intergenic
ATGGTTTAAGCAAGGGAAAA+TGG 0.404912 8:-3060559 MsG0880042043.01.T01:intron
CATGTGTTTGAATATATACT+TGG 0.408290 8:+3056362 None:intergenic
GAAAGAAGTAGTGGTTGGTT+TGG 0.408477 8:+3060988 None:intergenic
GCTTGTCAGTGCTTTGTCAC+TGG 0.410366 8:+3058309 None:intergenic
CTGGATGCTCCTATTTCTGT+TGG 0.413992 8:-3060751 MsG0880042043.01.T01:CDS
TACTTTGTTTCCAATGCTGC+AGG 0.414254 8:-3060785 MsG0880042043.01.T01:exon
TGCTTAAACCATTCATCACT+TGG 0.420796 8:+3060570 None:intergenic
AGTGGTTGGTTTGGTTTGGT+TGG 0.427682 8:+3060997 None:intergenic
AGGTGGAAGTTTGGCATGTT+GGG 0.427743 8:+3058480 None:intergenic
TTGCACAACAAGTGAGACTT+TGG 0.432432 8:+3058925 None:intergenic
CTGAACTGTAGTAATTCAAA+TGG 0.434779 8:-3060864 MsG0880042043.01.T01:five_prime_UTR
TATCTCATATCTGGCTCCTC+AGG 0.436139 8:-3058235 MsG0880042043.01.T01:CDS
AATCCATGGTTTCCCTTCAC+AGG 0.438753 8:-3059683 MsG0880042043.01.T01:intron
TGTTACGGCGCGATAGTCCT+TGG 0.439215 8:+3059548 None:intergenic
AAGTAGTGGTTGGTTTGGTT+TGG 0.445310 8:+3060993 None:intergenic
ATCGCGCCGTAACATTTGAT+TGG 0.446745 8:-3059539 MsG0880042043.01.T01:CDS
GCTCCTATTTCTGTTGGTGA+TGG 0.453847 8:-3060745 MsG0880042043.01.T01:CDS
AACCATTCATCACTTGGATT+AGG 0.456785 8:+3060576 None:intergenic
AACTTCAATAAGCTTATGGT+TGG 0.461173 8:+3057878 None:intergenic
GCTGCAGGATGATTATCTTC+TGG 0.462577 8:-3060770 MsG0880042043.01.T01:CDS
TTAAGTTGTTAATCTTCTCC+TGG 0.467916 8:+3058773 None:intergenic
GAAGATTGCGGCGAAGAACT+TGG 0.471562 8:-3056478 MsG0880042043.01.T01:CDS
ATTCAAGTCCAAATTTGGAT+AGG 0.473492 8:-3056262 MsG0880042043.01.T01:three_prime_UTR
GAGTGTTTAGGATCCATTAA+GGG 0.475394 8:-3058332 MsG0880042043.01.T01:intron
TCAAACCCATATTTAGGTTG+AGG 0.477709 8:+3059152 None:intergenic
AGATAATCATCCTGCAGCAT+TGG 0.488164 8:+3060775 None:intergenic
AGAACCATGAAAGGCTTGAA+TGG 0.488209 8:+3060956 None:intergenic
ATAAGCCTCAACCTAAATAT+GGG 0.489599 8:-3059157 MsG0880042043.01.T01:CDS
GGTTGGTTGGAGAGTGAAGA+GGG 0.490676 8:+3061014 None:intergenic
CAATACTAAAGGACAAAAGT+TGG 0.502637 8:-3057980 MsG0880042043.01.T01:CDS
TTCAAGTCCAAATTTGGATA+GGG 0.508145 8:-3056261 MsG0880042043.01.T01:three_prime_UTR
ATATTTCCTTCAGAGGTATG+TGG 0.509867 8:-3058015 MsG0880042043.01.T01:intron
CAAATGAAACTCACCTGTGA+AGG 0.512957 8:+3059670 None:intergenic
AGCTCAACCAGCGATCTCTC+TGG 0.519566 8:+3057931 None:intergenic
ACCTAGCCAATCAAATGTTA+CGG 0.522106 8:+3059533 None:intergenic
TAAACAGGAAAATATTCAGA+TGG 0.522423 8:-3060600 MsG0880042043.01.T01:intron
CACACAAGCAATTACCATCA+AGG 0.528864 8:+3059123 None:intergenic
AACCATGAAGAAAGACCTAA+AGG 0.534883 8:-3058188 MsG0880042043.01.T01:intron
GGCCTAATCCAAGTGATGAA+TGG 0.538010 8:-3060578 MsG0880042043.01.T01:CDS
GCTTTGTGGAACAAGATTGA+AGG 0.542969 8:+3060913 None:intergenic
GTGATGAATGGTTTAAGCAA+GGG 0.543761 8:-3060566 MsG0880042043.01.T01:CDS
TAGGTGGAAGTTTGGCATGT+TGG 0.548269 8:+3058479 None:intergenic
TGCATGAAAGAAGTAGTGGT+TGG 0.550004 8:+3060983 None:intergenic
GGATATGCAAACAATACTAA+AGG 0.550936 8:-3057991 MsG0880042043.01.T01:CDS
CCTTCAGTGATATTAATCCA+TGG 0.554816 8:-3059697 MsG0880042043.01.T01:CDS
AATATATACTTGGCCTACAC+AGG 0.555459 8:+3056372 None:intergenic
GGTGATGGTTTCTCTTTCAG+TGG 0.555932 8:-3060730 MsG0880042043.01.T01:CDS
ATATTCAGCAACTTTCTGCT+AGG 0.558095 8:-3058448 MsG0880042043.01.T01:CDS
CGATAGTCCTTGGAGAGTAC+CGG 0.562349 8:+3059558 None:intergenic
AAACAGGAAAATATTCAGAT+GGG 0.565601 8:-3060599 MsG0880042043.01.T01:intron
GATGGTTTCTCTTTCAGTGG+AGG 0.567845 8:-3060727 MsG0880042043.01.T01:intron
TTGTGGAACAAGATTGAAGG+TGG 0.568113 8:+3060916 None:intergenic
TAAGTATGCCAGCAAACACC+AGG 0.570359 8:-3058791 MsG0880042043.01.T01:CDS
TAAGCTTATTGAAGTTCCAA+AGG 0.573364 8:-3057871 MsG0880042043.01.T01:intron
CCATGGATTAATATCACTGA+AGG 0.576210 8:+3059697 None:intergenic
GGAGTGGAAGATTTCTGCAA+AGG 0.578345 8:-3057903 MsG0880042043.01.T01:CDS
AGTTCTTCCGGTACTCTCCA+AGG 0.579849 8:-3059565 MsG0880042043.01.T01:CDS
AATGAAAGAAGAAGATGCAA+TGG 0.582732 8:-3058272 MsG0880042043.01.T01:CDS
GACAAAGCACTGACAAGCTG+TGG 0.588914 8:-3058304 MsG0880042043.01.T01:CDS
ACAAGAAGAAGAACCATGAA+AGG 0.590747 8:+3060947 None:intergenic
CTGGTTGAGCTACGATGGAG+TGG 0.595244 8:-3057919 MsG0880042043.01.T01:CDS
AGTGATGAATGGTTTAAGCA+AGG 0.595928 8:-3060567 MsG0880042043.01.T01:CDS
AAATGAAACTCACCTGTGAA+GGG 0.596087 8:+3059671 None:intergenic
TTAGGCTGGACATCATGCAC+AGG 0.598886 8:-3056500 MsG0880042043.01.T01:intron
ATATTGCAATTAACCTGTGT+AGG 0.600926 8:-3056385 MsG0880042043.01.T01:three_prime_UTR
GGTACTAGCTCTCAAGCTAC+CGG 0.606037 8:-3060008 MsG0880042043.01.T01:CDS
ATTGGAAACAAAGTATGAAG+AGG 0.606508 8:+3060793 None:intergenic
GATCGCTGGTTGAGCTACGA+TGG 0.607809 8:-3057924 MsG0880042043.01.T01:CDS
GAGGAGCCAGATATGAGATA+GGG 0.609039 8:+3058238 None:intergenic
TTGCTGAATATAGACAATGT+AGG 0.611532 8:+3058460 None:intergenic
ATGTTCGAACCACTGTATGT+TGG 0.614538 8:-3057956 MsG0880042043.01.T01:CDS
TGGTTGGTTGGAGAGTGAAG+AGG 0.616767 8:+3061013 None:intergenic
CTGAATATAGACAATGTAGG+TGG 0.618276 8:+3058463 None:intergenic
ACACAAGCAATTACCATCAA+GGG 0.620118 8:+3059124 None:intergenic
GCCGTAACATTTGATTGGCT+AGG 0.627082 8:-3059534 MsG0880042043.01.T01:intron
TCACCTGTGAAGGGAAACCA+TGG 0.629688 8:+3059680 None:intergenic
TGTGGAACAAGATTGAAGGT+GGG 0.641760 8:+3060917 None:intergenic
GTTGGGGCCAGAGAGATCGC+TGG 0.642573 8:-3057938 MsG0880042043.01.T01:CDS
CATCATGCACAGGAAGATTG+CGG 0.645709 8:-3056490 MsG0880042043.01.T01:CDS
GTTCGAACCACTGTATGTTG+GGG 0.646382 8:-3057954 MsG0880042043.01.T01:CDS
TTTCCTTCAGAGGTATGTGG+AGG 0.652255 8:-3058012 MsG0880042043.01.T01:intron
TAATTACCTGAAACGATCGC+CGG 0.653802 8:+3059989 None:intergenic
TGCATTCAATGCAAAGCCTG+AGG 0.657773 8:+3058219 None:intergenic
TCTCTGGCCCCAACATACAG+TGG 0.659704 8:+3057947 None:intergenic
TCATTGCATGAAAGAAGTAG+TGG 0.693381 8:+3060979 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATATAAAAATTGAGTTAA+AGG - Chr8:3059856-3059875 MsG0880042043.01.T01:intron 10.0%
!! AATGAAGTTCAAATAATAAA+AGG + Chr8:3057084-3057103 None:intergenic 15.0%
!! AATTAAGAAAAATATGACAT+AGG - Chr8:3057344-3057363 MsG0880042043.01.T01:intron 15.0%
!! ATGAAGTTCAAATAATAAAA+GGG + Chr8:3057083-3057102 None:intergenic 15.0%
!! ATTGATATAAACCAAATTAA+TGG - Chr8:3057841-3057860 MsG0880042043.01.T01:intron 15.0%
!! TAGTTAATCACATATTTAAA+CGG + Chr8:3058601-3058620 None:intergenic 15.0%
!! TTCATACTAAAAAAACATTT+CGG + Chr8:3060624-3060643 None:intergenic 15.0%
!!! AGTGAATTTCTATATATTTT+GGG + Chr8:3059108-3059127 None:intergenic 15.0%
!!! AGTTTGTTAATGTTATTTTT+CGG - Chr8:3057943-3057962 MsG0880042043.01.T01:CDS 15.0%
!!! ATATGATTTTATTCAATAGA+TGG - Chr8:3057503-3057522 MsG0880042043.01.T01:intron 15.0%
!! AAAGATAAATATTCACCTTT+AGG + Chr8:3059083-3059102 None:intergenic 20.0%
!! AATCATATCAACAACAAAAT+TGG + Chr8:3057157-3057176 None:intergenic 20.0%
!! ACATATACTAATAGAAACTA+TGG - Chr8:3059637-3059656 MsG0880042043.01.T01:intron 20.0%
!! ATGATATTGCCATTAAAATT+GGG - Chr8:3060958-3060977 MsG0880042043.01.T01:five_prime_UTR 20.0%
!! TAACATTAACAAACTAAAGT+TGG + Chr8:3057938-3057957 None:intergenic 20.0%
!!! ATTTTGTTGTTGATATGATT+AGG - Chr8:3057157-3057176 MsG0880042043.01.T01:intron 20.0%
!!! ATTTTTCAGAACAAATATTG+AGG - Chr8:3057911-3057930 MsG0880042043.01.T01:CDS 20.0%
!!! CAGATTTTTAAAAATAGAGA+GGG - Chr8:3059883-3059902 MsG0880042043.01.T01:intron 20.0%
!!! CAGTGAATTTCTATATATTT+TGG + Chr8:3059109-3059128 None:intergenic 20.0%
!!! CTCTTTTTCATTTTCTTTTT+TGG - Chr8:3056571-3056590 MsG0880042043.01.T01:intron 20.0%
!!! GTTAATTGAGTACTTTATTT+TGG + Chr8:3059161-3059180 None:intergenic 20.0%
!!! TAACAAATTTTTGTCACATA+GGG + Chr8:3057001-3057020 None:intergenic 20.0%
!!! TATAGTTTCTTCTATTTTGT+TGG - Chr8:3057756-3057775 MsG0880042043.01.T01:intron 20.0%
!!! TCAGATTTTTAAAAATAGAG+AGG - Chr8:3059882-3059901 MsG0880042043.01.T01:intron 20.0%
!!! TGAATGTAGTTTTTAATGAA+AGG - Chr8:3060383-3060402 MsG0880042043.01.T01:intron 20.0%
!!! TTTTATTTAAGCAAAGTAAC+AGG + Chr8:3059565-3059584 None:intergenic 20.0%
!!! TTTTTCAGAACAAATATTGA+GGG - Chr8:3057912-3057931 MsG0880042043.01.T01:CDS 20.0%
! AAACAGGAAAATATTCAGAT+GGG - Chr8:3056654-3056673 MsG0880042043.01.T01:intron 25.0%
! ACTAATAGAAACTATGGTTA+AGG - Chr8:3059643-3059662 MsG0880042043.01.T01:intron 25.0%
! AGAGAATCAATCACATTAAA+TGG + Chr8:3058898-3058917 None:intergenic 25.0%
! AGTGTTAGAATTAGACATAT+AGG - Chr8:3060523-3060542 MsG0880042043.01.T01:intron 25.0%
! ATATGACATAGGAAAAATTG+CGG - Chr8:3057355-3057374 MsG0880042043.01.T01:intron 25.0%
! ATTATTGGAATCTTCTAAAC+AGG - Chr8:3056638-3056657 MsG0880042043.01.T01:intron 25.0%
! CAACTCAAAAATAAACTTAC+AGG + Chr8:3058520-3058539 None:intergenic 25.0%
! CATGATATTGCCATTAAAAT+TGG - Chr8:3060957-3060976 MsG0880042043.01.T01:five_prime_UTR 25.0%
! CATGTGTTTGAATATATACT+TGG + Chr8:3060894-3060913 None:intergenic 25.0%
! CCTGAAATAGAAAAAGAAAA+TGG + Chr8:3058062-3058081 None:intergenic 25.0%
! CTAATAGAAACTATGGTTAA+GGG - Chr8:3059644-3059663 MsG0880042043.01.T01:intron 25.0%
! CTTAAGACAAATATGTGAAA+AGG + Chr8:3059422-3059441 None:intergenic 25.0%
! TAAACAGGAAAATATTCAGA+TGG - Chr8:3056653-3056672 MsG0880042043.01.T01:intron 25.0%
! TAAATTGATTGTGAAGTGTA+AGG - Chr8:3057028-3057047 MsG0880042043.01.T01:intron 25.0%
! TATCTGTGATTTGAGAAATT+TGG - Chr8:3059201-3059220 MsG0880042043.01.T01:intron 25.0%
! TATGATTCAATTAGTAACGT+AGG + Chr8:3057475-3057494 None:intergenic 25.0%
! TCACATTAAATGGAATCTTT+AGG + Chr8:3058888-3058907 None:intergenic 25.0%
! TTAATTCATATTTCCTTCAG+AGG - Chr8:3059231-3059250 MsG0880042043.01.T01:intron 25.0%
!! AAAGCAAAAGATCCAATTTT+TGG - Chr8:3057212-3057231 MsG0880042043.01.T01:intron 25.0%
!! AAGCAAAAGATCCAATTTTT+GGG - Chr8:3057213-3057232 MsG0880042043.01.T01:intron 25.0%
!! ATAAACTTCTTGCTCTTTTT+AGG - Chr8:3060735-3060754 MsG0880042043.01.T01:CDS 25.0%
!! ATTTGAACTTCATTAAGTTG+AGG - Chr8:3057090-3057109 MsG0880042043.01.T01:intron 25.0%
!! CCATTTTCTTTTTCTATTTC+AGG - Chr8:3058059-3058078 MsG0880042043.01.T01:intron 25.0%
!! CTAACAAATTTTTGTCACAT+AGG + Chr8:3057002-3057021 None:intergenic 25.0%
!! CTTTTTCTATTTCAGGATTT+GGG - Chr8:3058066-3058085 MsG0880042043.01.T01:intron 25.0%
!! TCTTCTTCTTTCATTTTGTA+TGG + Chr8:3058976-3058995 None:intergenic 25.0%
!! TCTTTTTCTATTTCAGGATT+TGG - Chr8:3058065-3058084 MsG0880042043.01.T01:intron 25.0%
!!! CTGTAATTCTGAGATATTAT+TGG - Chr8:3056623-3056642 MsG0880042043.01.T01:intron 25.0%
!!! TCTAAAAGCATCCATTAATT+TGG + Chr8:3057855-3057874 None:intergenic 25.0%
!!! TGGACAAACTTTATTTTTTC+CGG + Chr8:3056827-3056846 None:intergenic 25.0%
AAAAGTTGAATTTCCACACA+AGG + Chr8:3060100-3060119 None:intergenic 30.0%
AACTCTTCACAATGAAAATG+TGG - Chr8:3059677-3059696 MsG0880042043.01.T01:intron 30.0%
AACTGAAAGCTTGATTATCA+AGG + Chr8:3057981-3058000 None:intergenic 30.0%
AACTTCAATAAGCTTATGGT+TGG + Chr8:3059378-3059397 None:intergenic 30.0%
AATGAAAGAAGAAGATGCAA+TGG - Chr8:3058981-3059000 MsG0880042043.01.T01:intron 30.0%
AATTTCGACAACAATTTCGA+TGG - Chr8:3058569-3058588 MsG0880042043.01.T01:intron 30.0%
ACATCTTTCTATTCTCCTAA+GGG - Chr8:3060703-3060722 MsG0880042043.01.T01:intron 30.0%
AGATCTAGTATCTAGTATTG+TGG - Chr8:3060229-3060248 MsG0880042043.01.T01:intron 30.0%
AGGAAAAGAATGATACTCTT+TGG + Chr8:3059483-3059502 None:intergenic 30.0%
AGGCAAGAAATATAAATCTC+TGG - Chr8:3060135-3060154 MsG0880042043.01.T01:intron 30.0%
AGTTTGTGTCTTTGTGTTAA+TGG - Chr8:3056418-3056437 MsG0880042043.01.T01:three_prime_UTR 30.0%
ATAAGCCTCAACCTAAATAT+GGG - Chr8:3058096-3058115 MsG0880042043.01.T01:intron 30.0%
ATATTGCAATTAACCTGTGT+AGG - Chr8:3060868-3060887 MsG0880042043.01.T01:five_prime_UTR 30.0%
ATTCAAGTCCAAATTTGGAT+AGG - Chr8:3060991-3061010 MsG0880042043.01.T01:five_prime_UTR 30.0%
ATTGGAAACAAAGTATGAAG+AGG + Chr8:3056463-3056482 None:intergenic 30.0%
CAATACTAAAGGACAAAAGT+TGG - Chr8:3059273-3059292 MsG0880042043.01.T01:intron 30.0%
CAGAATTGTTTAGATAACTG+TGG + Chr8:3056966-3056985 None:intergenic 30.0%
CAGATATTCAAGTCCAAATT+TGG - Chr8:3060986-3061005 MsG0880042043.01.T01:five_prime_UTR 30.0%
CTCAAAAATAAACTTACAGG+TGG + Chr8:3058517-3058536 None:intergenic 30.0%
CTCATTTAAGAATATGCCTA+GGG + Chr8:3057614-3057633 None:intergenic 30.0%
CTCTTGAACTATTGTTAGAA+GGG - Chr8:3056880-3056899 MsG0880042043.01.T01:intron 30.0%
CTGAACTGTAGTAATTCAAA+TGG - Chr8:3056389-3056408 MsG0880042043.01.T01:three_prime_UTR 30.0%
GAACTTGGACAACTTATTTA+TGG - Chr8:3060790-3060809 MsG0880042043.01.T01:exon 30.0%
GGATATGCAAACAATACTAA+AGG - Chr8:3059262-3059281 MsG0880042043.01.T01:intron 30.0%
GTTAAAGCTTATTCAATTCC+TGG - Chr8:3057179-3057198 MsG0880042043.01.T01:intron 30.0%
GTTTATGATTGCATACTCAT+TGG + Chr8:3059589-3059608 None:intergenic 30.0%
GTTTATTGTAACATTCCCTT+AGG + Chr8:3060721-3060740 None:intergenic 30.0%
TAAGCTTATTGAAGTTCCAA+AGG - Chr8:3059382-3059401 MsG0880042043.01.T01:intron 30.0%
TCTCTTGAACTATTGTTAGA+AGG - Chr8:3056879-3056898 MsG0880042043.01.T01:intron 30.0%
TCTTGAACTATTGTTAGAAG+GGG - Chr8:3056881-3056900 MsG0880042043.01.T01:intron 30.0%
TTCAAGTCCAAATTTGGATA+GGG - Chr8:3060992-3061011 MsG0880042043.01.T01:five_prime_UTR 30.0%
TTCACATATTTGTCTTAAGC+TGG - Chr8:3059423-3059442 MsG0880042043.01.T01:intron 30.0%
TTGCTGAATATAGACAATGT+AGG + Chr8:3058796-3058815 None:intergenic 30.0%
TTGGAACTTCAATAAGCTTA+TGG + Chr8:3059382-3059401 None:intergenic 30.0%
TTTAATGAAAGGACCAAATG+CGG - Chr8:3060394-3060413 MsG0880042043.01.T01:intron 30.0%
TTTCATAGGGAGCTTAAATT+GGG - Chr8:3060305-3060324 MsG0880042043.01.T01:intron 30.0%
TTTCGACAGCAAATAAGAAA+TGG + Chr8:3056746-3056765 None:intergenic 30.0%
! CAATTTTTGTCGCTATGAAA+CGG + Chr8:3058158-3058177 None:intergenic 30.0%
! TCAACTTTTTGTCAGAAGAA+TGG - Chr8:3060111-3060130 MsG0880042043.01.T01:intron 30.0%
! TCTGCATTTCCCAATTTTAA+TGG + Chr8:3060970-3060989 None:intergenic 30.0%
! TTAAGTTGTTAATCTTCTCC+TGG + Chr8:3058483-3058502 None:intergenic 30.0%
!! ATTAGTCTTGTTTGTTTGCA+GGG - Chr8:3058418-3058437 MsG0880042043.01.T01:intron 30.0%
!! TACAAGGGGCATTTATAAAT+CGG + Chr8:3059707-3059726 None:intergenic 30.0%
!!! TGACTGTTTTGATGATAGTT+TGG - Chr8:3059737-3059756 MsG0880042043.01.T01:intron 30.0%
!!! TGTTTTGATGATAGTTTGGT+AGG - Chr8:3059741-3059760 MsG0880042043.01.T01:intron 30.0%
AAAAGAGTAGCTATGCTACT+AGG + Chr8:3056558-3056577 None:intergenic 35.0%
AAACCATCACCAACAGAAAT+AGG + Chr8:3056514-3056533 None:intergenic 35.0%
AAATGAAACTCACCTGTGAA+GGG + Chr8:3057585-3057604 None:intergenic 35.0%
AACCATGAAGAAAGACCTAA+AGG - Chr8:3059065-3059084 MsG0880042043.01.T01:intron 35.0%
AACCATTCATCACTTGGATT+AGG + Chr8:3056680-3056699 None:intergenic 35.0%
AATATATACTTGGCCTACAC+AGG + Chr8:3060884-3060903 None:intergenic 35.0%
ACAAGAAGAAGAACCATGAA+AGG + Chr8:3056309-3056328 None:intergenic 35.0%
ACACAAGCAATTACCATCAA+GGG + Chr8:3058132-3058151 None:intergenic 35.0%
ACCTAACAGTCTAAGTTCTT+AGG + Chr8:3059998-3060017 None:intergenic 35.0%
ACCTAGCCAATCAAATGTTA+CGG + Chr8:3057723-3057742 None:intergenic 35.0%
ACTCAAAGTTAGTAGAGATG+TGG - Chr8:3058002-3058021 MsG0880042043.01.T01:CDS 35.0%
ACTCAAGATTTCCAAATCCT+TGG + Chr8:3056800-3056819 None:intergenic 35.0%
AGTACTATGCTTGGAAACTA+TGG - Chr8:3060654-3060673 MsG0880042043.01.T01:intron 35.0%
AGTCAATGATCTGACTACAA+GGG + Chr8:3059722-3059741 None:intergenic 35.0%
AGTGATGAATGGTTTAAGCA+AGG - Chr8:3056686-3056705 MsG0880042043.01.T01:intron 35.0%
ATATTCAGCAACTTTCTGCT+AGG - Chr8:3058805-3058824 MsG0880042043.01.T01:CDS 35.0%
ATGATGACACATATTCTGCA+TGG + Chr8:3058278-3058297 None:intergenic 35.0%
ATGGTTTAAGCAAGGGAAAA+TGG - Chr8:3056694-3056713 MsG0880042043.01.T01:intron 35.0%
CACATCTTTCTATTCTCCTA+AGG - Chr8:3060702-3060721 MsG0880042043.01.T01:intron 35.0%
CAGTCTAAGTTCTTAGGAAT+AGG + Chr8:3059992-3060011 None:intergenic 35.0%
CCATGATTCTTATTAGCCAA+GGG + Chr8:3058362-3058381 None:intergenic 35.0%
CCTTCAGTGATATTAATCCA+TGG - Chr8:3057556-3057575 MsG0880042043.01.T01:intron 35.0%
CTAGAAGTAGCTTAATCTCA+TGG - Chr8:3059797-3059816 MsG0880042043.01.T01:intron 35.0%
CTAGGAAATACAGGAATATG+TGG - Chr8:3060334-3060353 MsG0880042043.01.T01:intron 35.0%
CTGAATATAGACAATGTAGG+TGG + Chr8:3058793-3058812 None:intergenic 35.0%
CTTAAGAATTCGAACAAGCT+TGG - Chr8:3060467-3060486 MsG0880042043.01.T01:intron 35.0%
GACATTTCCCTATCCAAATT+TGG + Chr8:3061002-3061021 None:intergenic 35.0%
GATAAGCCTCAACCTAAATA+TGG - Chr8:3058095-3058114 MsG0880042043.01.T01:intron 35.0%
GCTCATTTAAGAATATGCCT+AGG + Chr8:3057615-3057634 None:intergenic 35.0%
GGAATCTAAGCATTTACCTT+TGG + Chr8:3059401-3059420 None:intergenic 35.0%
GGATTTGGAAATCTTGAGTT+TGG - Chr8:3056801-3056820 MsG0880042043.01.T01:intron 35.0%
GTGATGAATGGTTTAAGCAA+GGG - Chr8:3056687-3056706 MsG0880042043.01.T01:intron 35.0%
GTGATTAACGCAGTTTCATA+GGG - Chr8:3060292-3060311 MsG0880042043.01.T01:intron 35.0%
GTGTAGTCAAACCCATATTT+AGG + Chr8:3058110-3058129 None:intergenic 35.0%
GTTCGAATTCTTAAGGAACT+AGG + Chr8:3060462-3060481 None:intergenic 35.0%
GTTTCATAGGGAGCTTAAAT+TGG - Chr8:3060304-3060323 MsG0880042043.01.T01:intron 35.0%
TCATTGCATGAAAGAAGTAG+TGG + Chr8:3056277-3056296 None:intergenic 35.0%
TCCATGATTCTTATTAGCCA+AGG + Chr8:3058363-3058382 None:intergenic 35.0%
TCCTAAGAACTTAGACTGTT+AGG - Chr8:3059994-3060013 MsG0880042043.01.T01:intron 35.0%
TGATTCTCTTGTGAGTGTTT+AGG - Chr8:3058909-3058928 MsG0880042043.01.T01:intron 35.0%
TGCTTAAACCATTCATCACT+TGG + Chr8:3056686-3056705 None:intergenic 35.0%
TGTGATTAACGCAGTTTCAT+AGG - Chr8:3060291-3060310 MsG0880042043.01.T01:intron 35.0%
TTCTTATCGCAAAGTTCTTC+CGG - Chr8:3057676-3057695 MsG0880042043.01.T01:intron 35.0%
TTTGCGATAAGAATATGCCT+AGG + Chr8:3057669-3057688 None:intergenic 35.0%
! AGTTTCATTTGTTTCTCCCT+AGG - Chr8:3057595-3057614 MsG0880042043.01.T01:intron 35.0%
! ATATTATGCACTCACTGACT+CGG + Chr8:3059842-3059861 None:intergenic 35.0%
! ATATTTCCTTCAGAGGTATG+TGG - Chr8:3059238-3059257 MsG0880042043.01.T01:intron 35.0%
! CAAGCTTGTTCGAATTCTTA+AGG + Chr8:3060469-3060488 None:intergenic 35.0%
! CCATGGATTAATATCACTGA+AGG + Chr8:3057559-3057578 None:intergenic 35.0%
! GAGTGTTTAGGATCCATTAA+GGG - Chr8:3058921-3058940 MsG0880042043.01.T01:intron 35.0%
! GCTAGGTGAAATATTTTCAC+AGG - Chr8:3058822-3058841 MsG0880042043.01.T01:intron 35.0%
! TGAGTGTTTAGGATCCATTA+AGG - Chr8:3058920-3058939 MsG0880042043.01.T01:intron 35.0%
!! ATGGATGCTTTTAGAAGCAT+AGG - Chr8:3057860-3057879 MsG0880042043.01.T01:intron 35.0%
!! CATTAGTCTTGTTTGTTTGC+AGG - Chr8:3058417-3058436 MsG0880042043.01.T01:intron 35.0%
!! CCAATTTTTGGGCTAACAAT+GGG - Chr8:3057224-3057243 MsG0880042043.01.T01:intron 35.0%
!! TCAAACCCATATTTAGGTTG+AGG + Chr8:3058104-3058123 None:intergenic 35.0%
!! TCCAATTTTTGGGCTAACAA+TGG - Chr8:3057223-3057242 MsG0880042043.01.T01:intron 35.0%
!! TTGCACAAAAGTACTATGCT+TGG - Chr8:3060645-3060664 MsG0880042043.01.T01:intron 35.0%
!!! TTTTTTTTGTCTTACCCCTC+TGG - Chr8:3056771-3056790 MsG0880042043.01.T01:intron 35.0%
AAGATGATCCATTCCTGACA+CGG + Chr8:3060187-3060206 None:intergenic 40.0%
AAGCAAAGTAACAGGTAACG+AGG + Chr8:3059557-3059576 None:intergenic 40.0%
AGAACCATGAAAGGCTTGAA+TGG + Chr8:3056300-3056319 None:intergenic 40.0%
AGAAGACCCTATCTCATATC+TGG - Chr8:3059009-3059028 MsG0880042043.01.T01:intron 40.0%
AGACAATGTAGGTGGAAGTT+TGG + Chr8:3058785-3058804 None:intergenic 40.0%
AGATAATCATCCTGCAGCAT+TGG + Chr8:3056481-3056500 None:intergenic 40.0%
ATCCTGGCTAAAACAATCGT+TGG + Chr8:3056847-3056866 None:intergenic 40.0%
ATGACCATTCAAGCCTTTCA+TGG - Chr8:3056293-3056312 MsG0880042043.01.T01:three_prime_UTR 40.0%
ATGTTCGAACCACTGTATGT+TGG - Chr8:3059297-3059316 MsG0880042043.01.T01:intron 40.0%
CAAATGAAACTCACCTGTGA+AGG + Chr8:3057586-3057605 None:intergenic 40.0%
CACACAAGCAATTACCATCA+AGG + Chr8:3058133-3058152 None:intergenic 40.0%
CACCTTTAGGTCTTTCTTCA+TGG + Chr8:3059070-3059089 None:intergenic 40.0%
CAGTCAATGATCTGACTACA+AGG + Chr8:3059723-3059742 None:intergenic 40.0%
CCAAGCTATCTTAGACAACA+AGG + Chr8:3060566-3060585 None:intergenic 40.0%
CCCATTGTTAGCCCAAAAAT+TGG + Chr8:3057227-3057246 None:intergenic 40.0%
CCCTTGGCTAATAAGAATCA+TGG - Chr8:3058359-3058378 MsG0880042043.01.T01:intron 40.0%
CCTTGAAAGAAAACGCTTTG+TGG + Chr8:3056357-3056376 None:intergenic 40.0%
CTGGCATACTTAACTACAAC+TGG + Chr8:3058454-3058473 None:intergenic 40.0%
GATTATCAACACTTCCGCTT+TGG + Chr8:3057537-3057556 None:intergenic 40.0%
GCTTAAATTGGGAAAGGTCT+AGG - Chr8:3060316-3060335 MsG0880042043.01.T01:intron 40.0%
GCTTATTCAATTCCTGGAAC+TGG - Chr8:3057185-3057204 MsG0880042043.01.T01:intron 40.0%
GCTTTGTGGAACAAGATTGA+AGG + Chr8:3056343-3056362 None:intergenic 40.0%
GTAGCTTAATCTCATGGATG+AGG - Chr8:3059803-3059822 MsG0880042043.01.T01:intron 40.0%
GTCAATGATCTGACTACAAG+GGG + Chr8:3059721-3059740 None:intergenic 40.0%
TAATTACCTGAAACGATCGC+CGG + Chr8:3057267-3057286 None:intergenic 40.0%
TAGGGAGCTTAAATTGGGAA+AGG - Chr8:3060310-3060329 MsG0880042043.01.T01:intron 40.0%
TAGGTCTTTCTTCATGGTTC+TGG + Chr8:3059064-3059083 None:intergenic 40.0%
TAGGTTTGACGCTAAACTTC+AGG - Chr8:3059760-3059779 MsG0880042043.01.T01:intron 40.0%
TGATTTCTATGTTGCTGCCT+AGG - Chr8:3057649-3057668 MsG0880042043.01.T01:intron 40.0%
TGCATGAAAGAAGTAGTGGT+TGG + Chr8:3056273-3056292 None:intergenic 40.0%
TGTGGAACAAGATTGAAGGT+GGG + Chr8:3056339-3056358 None:intergenic 40.0%
TGTTCGAACCACTGTATGTT+GGG - Chr8:3059298-3059317 MsG0880042043.01.T01:intron 40.0%
TTCTAATACCGTGTCAGGAA+TGG - Chr8:3060176-3060195 MsG0880042043.01.T01:intron 40.0%
TTGCACAACAAGTGAGACTT+TGG + Chr8:3058331-3058350 None:intergenic 40.0%
TTGGAAATCTTGAGTTTGGC+CGG - Chr8:3056805-3056824 MsG0880042043.01.T01:intron 40.0%
TTGTGCAAGTAAGTTTCCCT+TGG - Chr8:3058343-3058362 MsG0880042043.01.T01:intron 40.0%
TTGTGGAACAAGATTGAAGG+TGG + Chr8:3056340-3056359 None:intergenic 40.0%
! ATGCTCATATAGTAGCCTTG+CGG + Chr8:3059515-3059534 None:intergenic 40.0%
! CCTTGTTGTCTAAGATAGCT+TGG - Chr8:3060563-3060582 MsG0880042043.01.T01:CDS 40.0%
! CTTTTTGTCAGAAGAATGGC+AGG - Chr8:3060115-3060134 MsG0880042043.01.T01:intron 40.0%
! GAAAGAAGTAGTGGTTGGTT+TGG + Chr8:3056268-3056287 None:intergenic 40.0%
! TACTTTGTTTCCAATGCTGC+AGG - Chr8:3056468-3056487 MsG0880042043.01.T01:CDS 40.0%
! TTGATGATCAATGCCGCATT+TGG + Chr8:3060410-3060429 None:intergenic 40.0%
! TTGTGTCGATGCTTACTCTA+TGG - Chr8:3057812-3057831 MsG0880042043.01.T01:intron 40.0%
!! AAGTAGTGGTTGGTTTGGTT+TGG + Chr8:3056263-3056282 None:intergenic 40.0%
!! ACCTCCTGAGCTTTGAAAAA+TGG - Chr8:3060054-3060073 MsG0880042043.01.T01:CDS 40.0%
!! ACTTCTTGCTCTTTTTAGGC+TGG - Chr8:3060739-3060758 MsG0880042043.01.T01:CDS 40.0%
!! CCACAAAGCGTTTTCTTTCA+AGG - Chr8:3056354-3056373 MsG0880042043.01.T01:three_prime_UTR 40.0%
!! TATTATGCACTCACTGACTC+GGG + Chr8:3059841-3059860 None:intergenic 40.0%
!!! AGATGGTTTTGTGTCCAAAG+CGG - Chr8:3057520-3057539 MsG0880042043.01.T01:intron 40.0%
!!! TTGGCCATTTTTCAAAGCTC+AGG + Chr8:3060061-3060080 None:intergenic 40.0%
!!! TTTGCTTTTTCACCAGTTCC+AGG + Chr8:3057200-3057219 None:intergenic 40.0%
AATCCATGGTTTCCCTTCAC+AGG - Chr8:3057570-3057589 MsG0880042043.01.T01:intron 45.0%
AATCTTCTCCTGGTGTTTGC+TGG + Chr8:3058473-3058492 None:intergenic 45.0%
ACTAGCTCATCTACCTTGTG+TGG - Chr8:3060084-3060103 MsG0880042043.01.T01:intron 45.0%
AGGTAGATGAGCTAGTGCAT+TGG + Chr8:3060080-3060099 None:intergenic 45.0%
AGGTGGAAGTTTGGCATGTT+GGG + Chr8:3058776-3058795 None:intergenic 45.0%
ATCGCGCCGTAACATTTGAT+TGG - Chr8:3057714-3057733 MsG0880042043.01.T01:intron 45.0%
ATGCTGCTATAGCACAGTAC+AGG + Chr8:3060256-3060275 None:intergenic 45.0%
CAAATCCTTGGAAACCAGAG+GGG + Chr8:3056788-3056807 None:intergenic 45.0%
CATCATGCACAGGAAGATTG+CGG - Chr8:3060763-3060782 MsG0880042043.01.T01:CDS 45.0%
CCAAATCCTTGGAAACCAGA+GGG + Chr8:3056789-3056808 None:intergenic 45.0%
CTCATGGATGAGGAATGTCA+AGG - Chr8:3059813-3059832 MsG0880042043.01.T01:intron 45.0%
GAGAACTCGAGTTCAAATCC+TGG + Chr8:3056863-3056882 None:intergenic 45.0%
GAGGAGCCAGATATGAGATA+GGG + Chr8:3059018-3059037 None:intergenic 45.0%
GATGGTTTCTCTTTCAGTGG+AGG - Chr8:3056526-3056545 MsG0880042043.01.T01:intron 45.0%
GCTGCAGGATGATTATCTTC+TGG - Chr8:3056483-3056502 MsG0880042043.01.T01:CDS 45.0%
GGAGTGGAAGATTTCTGCAA+AGG - Chr8:3059350-3059369 MsG0880042043.01.T01:intron 45.0%
GGCCTAATCCAAGTGATGAA+TGG - Chr8:3056675-3056694 MsG0880042043.01.T01:intron 45.0%
GGGAAAGGTCTAGGAAATAC+AGG - Chr8:3060325-3060344 MsG0880042043.01.T01:intron 45.0%
GTTCGAACCACTGTATGTTG+GGG - Chr8:3059299-3059318 MsG0880042043.01.T01:intron 45.0%
TAAGTATGCCAGCAAACACC+AGG - Chr8:3058462-3058481 MsG0880042043.01.T01:CDS 45.0%
TAGGTGGAAGTTTGGCATGT+TGG + Chr8:3058777-3058796 None:intergenic 45.0%
TATCCTCCACATACCTCTGA+AGG + Chr8:3059247-3059266 None:intergenic 45.0%
TCCAAATCCTTGGAAACCAG+AGG + Chr8:3056790-3056809 None:intergenic 45.0%
TCTGGCGCACTAGATTATAG+AGG - Chr8:3060153-3060172 MsG0880042043.01.T01:intron 45.0%
TGAGGAGCCAGATATGAGAT+AGG + Chr8:3059019-3059038 None:intergenic 45.0%
TGATCATCAACACTGGTGTC+TGG - Chr8:3060420-3060439 MsG0880042043.01.T01:intron 45.0%
TGCATTCAATGCAAAGCCTG+AGG + Chr8:3059037-3059056 None:intergenic 45.0%
TGCTGCTATAGCACAGTACA+GGG + Chr8:3060255-3060274 None:intergenic 45.0%
! AGAGGTTCTAATACCGTGTC+AGG - Chr8:3060171-3060190 MsG0880042043.01.T01:intron 45.0%
! GCCGTAACATTTGATTGGCT+AGG - Chr8:3057719-3057738 MsG0880042043.01.T01:intron 45.0%
! GGTGATGGTTTCTCTTTCAG+TGG - Chr8:3056523-3056542 MsG0880042043.01.T01:intron 45.0%
! TATCTCATATCTGGCTCCTC+AGG - Chr8:3059018-3059037 MsG0880042043.01.T01:intron 45.0%
! TCATATAGTAGCCTTGCGGA+AGG + Chr8:3059511-3059530 None:intergenic 45.0%
! TTTCCTTCAGAGGTATGTGG+AGG - Chr8:3059241-3059260 MsG0880042043.01.T01:intron 45.0%
!! AGTGGTTGGTTTGGTTTGGT+TGG + Chr8:3056259-3056278 None:intergenic 45.0%
!! CTGGATGCTCCTATTTCTGT+TGG - Chr8:3056502-3056521 MsG0880042043.01.T01:intron 45.0%
!! GCTCCTATTTCTGTTGGTGA+TGG - Chr8:3056508-3056527 MsG0880042043.01.T01:intron 45.0%
!! GTTGGTTTGGTTTGGTTGGT+TGG + Chr8:3056255-3056274 None:intergenic 45.0%
!!! GCCATTTTTCAAAGCTCAGG+AGG + Chr8:3060058-3060077 None:intergenic 45.0%
!!! GTCCAACGATTGTTTTAGCC+AGG - Chr8:3056842-3056861 MsG0880042043.01.T01:intron 45.0%
AGTTCTTCCGGTACTCTCCA+AGG - Chr8:3057688-3057707 MsG0880042043.01.T01:intron 50.0%
GAAGATTGCGGCGAAGAACT+TGG - Chr8:3060775-3060794 MsG0880042043.01.T01:CDS 50.0%
GCTTGTCAGTGCTTTGTCAC+TGG + Chr8:3058947-3058966 None:intergenic 50.0%
GCTTTGTCACTGGCCCTTAA+TGG + Chr8:3058937-3058956 None:intergenic 50.0%
GGGTTTGACTACACCCTTGA+TGG - Chr8:3058116-3058135 MsG0880042043.01.T01:intron 50.0%
TCACCTGTGAAGGGAAACCA+TGG + Chr8:3057576-3057595 None:intergenic 50.0%
TTAGGCTGGACATCATGCAC+AGG - Chr8:3060753-3060772 MsG0880042043.01.T01:CDS 50.0%
! CCCTCTGGTTTCCAAGGATT+TGG - Chr8:3056786-3056805 MsG0880042043.01.T01:intron 50.0%
! CGATAGTCCTTGGAGAGTAC+CGG + Chr8:3057698-3057717 None:intergenic 50.0%
! GGTACTAGCTCTCAAGCTAC+CGG - Chr8:3057245-3057264 MsG0880042043.01.T01:intron 50.0%
! GGTTGGTTGGAGAGTGAAGA+GGG + Chr8:3056242-3056261 None:intergenic 50.0%
! TCTTACCCCTCTGGTTTCCA+AGG - Chr8:3056780-3056799 MsG0880042043.01.T01:intron 50.0%
! TGGTTGGTTGGAGAGTGAAG+AGG + Chr8:3056243-3056262 None:intergenic 50.0%
!! GACAAAGCACTGACAAGCTG+TGG - Chr8:3058949-3058968 MsG0880042043.01.T01:CDS 50.0%
!! GCGGCATTGATCATCAACAC+TGG - Chr8:3060413-3060432 MsG0880042043.01.T01:intron 50.0%
AAGCTACCGGCGATCGTTTC+AGG - Chr8:3057258-3057277 MsG0880042043.01.T01:intron 55.0%
AGCTCAACCAGCGATCTCTC+TGG + Chr8:3059325-3059344 None:intergenic 55.0%
CTGGTTGAGCTACGATGGAG+TGG - Chr8:3059334-3059353 MsG0880042043.01.T01:intron 55.0%
TCTCTGGCCCCAACATACAG+TGG + Chr8:3059309-3059328 None:intergenic 55.0%
TGTTACGGCGCGATAGTCCT+TGG + Chr8:3057708-3057727 None:intergenic 55.0%
TTTCCTGCTTGCCTTCCGCA+AGG - Chr8:3059497-3059516 MsG0880042043.01.T01:intron 55.0%
! GATCGCTGGTTGAGCTACGA+TGG - Chr8:3059329-3059348 MsG0880042043.01.T01:intron 55.0%
CAGGAGGTTCTCGTGTGAGG+AGG + Chr8:3060042-3060061 None:intergenic 60.0%
GCTCAGGAGGTTCTCGTGTG+AGG + Chr8:3060045-3060064 None:intergenic 60.0%
! TAGCCTTGCGGAAGGCAAGC+AGG + Chr8:3059503-3059522 None:intergenic 60.0%
GTTGGGGCCAGAGAGATCGC+TGG - Chr8:3059315-3059334 MsG0880042043.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr8 gene 3056227 3061048 3056227 ID=MsG0880042043.01;Name=MsG0880042043.01
Chr8 mRNA 3056227 3061048 3056227 ID=MsG0880042043.01.T01;Parent=MsG0880042043.01;Name=MsG0880042043.01.T01;_AED=0.35;_eAED=0.35;_QI=254|1|1|1|0.90|0.83|12|214|344
Chr8 exon 3056227 3056518 3056227 ID=MsG0880042043.01.T01:exon:2068;Parent=MsG0880042043.01.T01
Chr8 exon 3057872 3058024 3057872 ID=MsG0880042043.01.T01:exon:2067;Parent=MsG0880042043.01.T01
Chr8 exon 3058189 3058344 3058189 ID=MsG0880042043.01.T01:exon:2066;Parent=MsG0880042043.01.T01
Chr8 exon 3058432 3058509 3058432 ID=MsG0880042043.01.T01:exon:2065;Parent=MsG0880042043.01.T01
Chr8 exon 3058756 3058836 3058756 ID=MsG0880042043.01.T01:exon:2064;Parent=MsG0880042043.01.T01
Chr8 exon 3058925 3058992 3058925 ID=MsG0880042043.01.T01:exon:2063;Parent=MsG0880042043.01.T01
Chr8 exon 3059138 3059194 3059138 ID=MsG0880042043.01.T01:exon:2062;Parent=MsG0880042043.01.T01
Chr8 exon 3059535 3059604 3059535 ID=MsG0880042043.01.T01:exon:2061;Parent=MsG0880042043.01.T01
Chr8 exon 3059684 3059753 3059684 ID=MsG0880042043.01.T01:exon:2060;Parent=MsG0880042043.01.T01
Chr8 exon 3059996 3060096 3059996 ID=MsG0880042043.01.T01:exon:2059;Parent=MsG0880042043.01.T01
Chr8 exon 3060560 3060615 3060560 ID=MsG0880042043.01.T01:exon:2058;Parent=MsG0880042043.01.T01
Chr8 exon 3060728 3061048 3060728 ID=MsG0880042043.01.T01:exon:2057;Parent=MsG0880042043.01.T01
Chr8 five_prime_UTR 3060795 3061048 3060795 ID=MsG0880042043.01.T01:five_prime_utr;Parent=MsG0880042043.01.T01
Chr8 CDS 3060728 3060794 3060728 ID=MsG0880042043.01.T01:cds;Parent=MsG0880042043.01.T01
Chr8 CDS 3060560 3060615 3060560 ID=MsG0880042043.01.T01:cds;Parent=MsG0880042043.01.T01
Chr8 CDS 3059996 3060096 3059996 ID=MsG0880042043.01.T01:cds;Parent=MsG0880042043.01.T01
Chr8 CDS 3059684 3059753 3059684 ID=MsG0880042043.01.T01:cds;Parent=MsG0880042043.01.T01
Chr8 CDS 3059535 3059604 3059535 ID=MsG0880042043.01.T01:cds;Parent=MsG0880042043.01.T01
Chr8 CDS 3059138 3059194 3059138 ID=MsG0880042043.01.T01:cds;Parent=MsG0880042043.01.T01
Chr8 CDS 3058925 3058992 3058925 ID=MsG0880042043.01.T01:cds;Parent=MsG0880042043.01.T01
Chr8 CDS 3058756 3058836 3058756 ID=MsG0880042043.01.T01:cds;Parent=MsG0880042043.01.T01
Chr8 CDS 3058432 3058509 3058432 ID=MsG0880042043.01.T01:cds;Parent=MsG0880042043.01.T01
Chr8 CDS 3058189 3058344 3058189 ID=MsG0880042043.01.T01:cds;Parent=MsG0880042043.01.T01
Chr8 CDS 3057872 3058024 3057872 ID=MsG0880042043.01.T01:cds;Parent=MsG0880042043.01.T01
Chr8 CDS 3056441 3056518 3056441 ID=MsG0880042043.01.T01:cds;Parent=MsG0880042043.01.T01
Chr8 three_prime_UTR 3056227 3056440 3056227 ID=MsG0880042043.01.T01:three_prime_utr;Parent=MsG0880042043.01.T01
Gene Sequence

>MsG0880042043.01.T01

ATGCTGCAGGATGATTATCTTCTGGATGCTCCTATTTCTGTTGGTGATGGTTTCTCTTTCAGTGGAGGAAAATATTCAGATGGGCCTAATCCAAGTGATGAATGGTTTAAGCAAGGGAAAATGGTTAAAGCTTATTCAATTCCTGGAACTGGTGAAAAAGCAAAAGATCCAATTTTTGGGCTAACAATGGGTACTAGCTCTCAAGCTACCGGCGATCGTTTCAGATGGTTTTGTGTCCAAAGCGGAAGTGTTGATAATCCTTCAGTGATATTAATCCATGGTTTCCCTTCACAGGCATATTCTTATCGCAAAGTTCTTCCGGTACTCTCCAAGGACTATCGCGCCGTAACATTTGATTGGCTAGGATTTGGGTTTTCTGATAAGCCTCAACCTAAATATGGGTTTGACTACACCCTTGATGAATATGTGTCATCATTAGAGTCACTTATTGATGAACTAGCTGTTACCAAAGTCTCACTTGTTGTGCAAGGATATTTTGCACCAGTTGTAGTTAAGTATGCCAGCAAACACCAGGAGAAGATTAACAACTTAATACTCATTAATCCACCTTTAACAGCCCAACATGCCAAACTTCCACCTACATTGTCTATATTCAGCAACTTTCTGCTAGGTGAAATATTTTCACAGGATCCATTAAGGGCCAGTGACAAAGCACTGACAAGCTGTGGACCATACAAAATGAAAGAAGAAGATGCAATGGTCTACAGAAGACCCTATCTCATATCTGGCTCCTCAGGCTTTGCATTGAATGCAATCACCAGAACCATGAAGAAAGACCTAAAGAGGTATGTGGAGGATATGCAAACAATACTAAAGGACAAAAGTTGGAATGTTCGAACCACTGTATGTTGGGGCCAGAGAGATCGCTGGTTGAGCTACGATGGAGTGGAAGATTTCTGCAAAGGTTCCAACCATAAGCTTATTGAAGTTCCAAAGGCTGGACATCATGCACAGGAAGATTGCGGCGAAGAACTTGGACAACTTATTTATGGAATAATAAGAAAAAAGAACTAA

Protein sequence

>MsG0880042043.01.T01

MLQDDYLLDAPISVGDGFSFSGGKYSDGPNPSDEWFKQGKMVKAYSIPGTGEKAKDPIFGLTMGTSSQATGDRFRWFCVQSGSVDNPSVILIHGFPSQAYSYRKVLPVLSKDYRAVTFDWLGFGFSDKPQPKYGFDYTLDEYVSSLESLIDELAVTKVSLVVQGYFAPVVVKYASKHQEKINNLILINPPLTAQHAKLPPTLSIFSNFLLGEIFSQDPLRASDKALTSCGPYKMKEEDAMVYRRPYLISGSSGFALNAITRTMKKDLKRYVEDMQTILKDKSWNVRTTVCWGQRDRWLSYDGVEDFCKGSNHKLIEVPKAGHHAQEDCGEELGQLIYGIIRKKN*