AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380015417.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015417.01.T01 MTR_8g096910 70.256 195 29 2 1 195 11 176 7.69e-95 273
MsG0380015417.01.T01 MTR_8g096920 67.692 195 34 2 1 195 8 173 1.16e-91 265
MsG0380015417.01.T01 MTR_8g096900 49.537 216 87 6 1 195 34 248 1.15e-60 189
MsG0380015417.01.T01 MTR_5g010635 48.544 206 86 4 9 195 21 225 7.64e-56 177
MsG0380015417.01.T01 MTR_5g010640 40.826 218 100 5 6 195 20 236 1.49e-48 158
MsG0380015417.01.T01 MTR_2g067990 40.000 200 102 6 11 195 26 222 1.78e-34 129
MsG0380015417.01.T01 MTR_5g059200 33.937 221 103 8 10 194 26 239 3.57e-28 107
MsG0380015417.01.T01 MTR_1g021945 33.036 224 112 4 9 195 23 245 2.19e-27 104
MsG0380015417.01.T01 MTR_8g107140 33.028 218 105 8 16 195 31 245 6.45e-27 103
MsG0380015417.01.T01 MTR_5g022350 33.186 226 116 11 1 195 22 243 8.20e-27 104
MsG0380015417.01.T01 MTR_8g075510 33.484 221 113 10 7 195 26 244 2.66e-26 101
MsG0380015417.01.T01 MTR_1g025420 34.234 222 104 9 14 194 25 245 6.26e-26 100
MsG0380015417.01.T01 MTR_8g037890 31.304 230 116 8 6 195 20 247 7.04e-26 101
MsG0380015417.01.T01 MTR_2g067980 33.040 227 108 11 11 195 23 247 9.19e-26 103
MsG0380015417.01.T01 MTR_1g025420 34.234 222 104 9 14 194 25 245 1.23e-25 101
MsG0380015417.01.T01 MTR_6g079580 30.204 245 112 11 1 195 5 240 3.45e-25 98.2
MsG0380015417.01.T01 MTR_3g114030 32.735 223 108 9 14 195 9 230 4.23e-25 98.2
MsG0380015417.01.T01 MTR_8g075550 42.446 139 63 5 11 133 27 164 6.08e-25 99.0
MsG0380015417.01.T01 MTR_4g073730 31.646 237 119 9 1 195 13 248 6.39e-25 98.6
MsG0380015417.01.T01 MTR_8g075510 33.182 220 113 10 7 194 26 243 6.96e-25 99.0
MsG0380015417.01.T01 MTR_4g073730 31.646 237 119 9 1 195 13 248 1.02e-24 99.0
MsG0380015417.01.T01 MTR_7g062610 31.718 227 117 6 6 195 17 242 1.21e-24 97.1
MsG0380015417.01.T01 MTR_5g022350 41.129 124 65 6 7 124 91 212 2.07e-24 95.9
MsG0380015417.01.T01 MTR_8g056820 30.568 229 119 7 6 195 20 247 4.06e-24 95.9
MsG0380015417.01.T01 MTR_3g111620 31.111 225 115 8 9 195 24 246 1.03e-23 94.7
MsG0380015417.01.T01 MTR_2g069660 32.051 234 119 9 1 195 11 243 1.27e-23 94.4
MsG0380015417.01.T01 MTR_8g036215 31.169 231 120 8 1 194 9 237 2.26e-23 93.6
MsG0380015417.01.T01 MTR_7g102380 31.667 240 117 11 1 195 4 241 3.63e-23 93.2
MsG0380015417.01.T01 MTR_5g022310 30.043 233 119 7 6 195 20 251 4.36e-23 93.2
MsG0380015417.01.T01 MTR_5g022310 30.043 233 119 7 6 195 20 251 7.73e-23 93.2
MsG0380015417.01.T01 MTR_4g073720 43.511 131 60 7 1 119 11 139 1.34e-22 93.2
MsG0380015417.01.T01 MTR_3g068015 41.600 125 62 6 13 127 29 152 3.84e-22 90.5
MsG0380015417.01.T01 MTR_6g009480 41.935 124 61 5 6 119 23 145 5.83e-22 90.5
MsG0380015417.01.T01 MTR_1g062630 31.197 234 118 12 2 195 12 242 3.32e-21 88.2
MsG0380015417.01.T01 MTR_2g068030 30.045 223 116 9 11 194 22 243 4.13e-21 87.8
MsG0380015417.01.T01 MTR_2g068655 32.599 227 111 11 9 195 28 252 4.77e-21 88.6
MsG0380015417.01.T01 MTR_1g062340 30.472 233 121 9 2 195 12 242 2.06e-20 85.9
MsG0380015417.01.T01 MTR_1g062350 30.472 233 121 9 2 195 12 242 2.10e-20 85.9
MsG0380015417.01.T01 MTR_1g062590 29.185 233 124 9 2 195 12 242 2.78e-20 85.5
MsG0380015417.01.T01 MTR_1g062370 30.901 233 120 10 2 195 12 242 3.03e-20 85.5
MsG0380015417.01.T01 MTR_4g063630 36.719 128 71 4 1 119 18 144 1.95e-19 83.2
MsG0380015417.01.T01 MTR_1g062660 29.362 235 123 10 2 195 10 242 6.30e-19 82.0
MsG0380015417.01.T01 MTR_5g023850 38.710 124 66 4 9 122 23 146 2.41e-18 79.7
MsG0380015417.01.T01 MTR_2g067970 30.000 180 89 8 51 195 5 182 9.12e-13 66.6
MsG0380015417.01.T01 MTR_1g062690 27.586 232 105 9 2 195 12 218 9.71e-13 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015417.01.T01 AT4G11650 49.048 210 88 4 4 195 15 223 7.08e-59 185
MsG0380015417.01.T01 AT1G77700 51.724 116 48 3 8 119 57 168 8.11e-33 120
MsG0380015417.01.T01 AT1G77700 51.724 116 48 3 8 119 85 196 1.43e-32 120
MsG0380015417.01.T01 AT1G77700 51.724 116 48 3 8 119 57 168 1.80e-32 119
MsG0380015417.01.T01 AT1G75050 34.978 223 108 6 9 195 22 243 1.46e-29 109
MsG0380015417.01.T01 AT1G75030 32.906 234 115 7 1 195 13 243 1.29e-28 107
MsG0380015417.01.T01 AT1G73620 32.889 225 110 7 9 195 39 260 1.37e-28 107
MsG0380015417.01.T01 AT4G36010 36.123 227 99 9 14 195 25 250 1.58e-28 108
MsG0380015417.01.T01 AT4G36010 36.123 227 99 9 14 195 25 250 1.58e-28 108
MsG0380015417.01.T01 AT1G18250 32.456 228 107 7 9 195 18 239 3.89e-28 106
MsG0380015417.01.T01 AT1G18250 31.878 229 109 7 8 195 18 240 8.83e-28 105
MsG0380015417.01.T01 AT4G38660 34.615 234 108 14 2 195 17 245 5.91e-27 105
MsG0380015417.01.T01 AT1G75800 31.799 239 118 10 1 195 11 248 7.69e-27 104
MsG0380015417.01.T01 AT1G75040 33.478 230 115 6 1 195 13 239 1.35e-26 102
MsG0380015417.01.T01 AT4G38660 34.802 227 106 13 6 195 2 223 1.52e-26 103
MsG0380015417.01.T01 AT4G38670 34.322 236 112 11 2 195 13 247 2.51e-25 99.8
MsG0380015417.01.T01 AT4G38670 34.322 236 112 11 2 195 13 247 2.51e-25 99.8
MsG0380015417.01.T01 AT4G38670 34.052 232 110 11 6 195 1 231 5.92e-25 98.2
MsG0380015417.01.T01 AT5G24620 42.520 127 61 5 3 119 71 195 2.18e-23 96.7
MsG0380015417.01.T01 AT5G24620 42.520 127 61 5 3 119 16 140 2.40e-23 96.3
MsG0380015417.01.T01 AT5G24620 42.520 127 61 5 3 119 92 216 2.72e-23 96.7
MsG0380015417.01.T01 AT1G20030 31.111 225 111 9 14 195 5 228 2.75e-23 94.7
MsG0380015417.01.T01 AT1G20030 31.111 225 111 9 14 195 22 245 2.89e-23 94.7
MsG0380015417.01.T01 AT2G17860 32.301 226 108 8 14 195 25 249 3.05e-23 93.6
MsG0380015417.01.T01 AT5G02140 31.356 236 120 9 1 195 7 241 8.91e-23 92.0
MsG0380015417.01.T01 AT5G02140 31.356 236 120 9 1 195 7 241 1.17e-22 92.8
MsG0380015417.01.T01 AT1G19320 33.023 215 115 11 1 195 15 220 2.32e-22 91.3
MsG0380015417.01.T01 AT5G40020 32.530 166 95 5 7 156 23 187 3.62e-22 90.9
MsG0380015417.01.T01 AT4G24180 30.472 233 120 10 4 195 25 256 2.41e-21 88.6
MsG0380015417.01.T01 AT4G24180 30.472 233 120 10 4 195 25 256 4.71e-21 89.0
MsG0380015417.01.T01 AT2G28790 40.351 114 57 4 16 119 56 168 4.87e-21 88.2
MsG0380015417.01.T01 AT2G28790 40.351 114 57 4 16 119 31 143 5.53e-21 87.4
MsG0380015417.01.T01 AT4G24180 37.255 153 72 7 4 133 25 176 6.61e-21 88.6
MsG0380015417.01.T01 AT5G38280 37.879 132 68 6 1 119 10 140 1.70e-20 89.0
MsG0380015417.01.T01 AT5G38280 37.879 132 68 6 1 119 10 140 2.17e-20 88.6
MsG0380015417.01.T01 AT4G24180 30.043 233 121 10 4 195 20 251 3.99e-20 85.5
MsG0380015417.01.T01 AT4G24180 30.043 233 121 10 4 195 20 251 8.83e-20 85.1
MsG0380015417.01.T01 AT4G24180 36.601 153 73 7 4 133 20 171 1.12e-19 85.1
MsG0380015417.01.T01 AT1G70250 27.193 228 113 8 14 195 147 367 1.25e-15 74.7
MsG0380015417.01.T01 AT4G18250 27.442 215 118 10 16 195 61 272 1.31e-11 63.2

Find 59 sgRNAs with CRISPR-Local

Find 62 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAACTTCATCAGGTCGAATT+TGG 0.148264 3:-69888205 MsG0380015417.01.T01:CDS
ACTTAATGGTGGAAACAATT+TGG 0.186661 3:-69888063 MsG0380015417.01.T01:CDS
CAATGGCTGCAACAACAATT+TGG 0.283897 3:-69887979 MsG0380015417.01.T01:CDS
AACTTCATCAGGTCGAATTT+GGG 0.288054 3:-69888204 MsG0380015417.01.T01:CDS
CTTGCCGAATACACACTTAA+TGG 0.300034 3:-69888077 MsG0380015417.01.T01:CDS
TCCACCATTAAGTGTGTATT+CGG 0.323800 3:+69888073 None:intergenic
ATTGATGTATCTTTGATTGA+TGG 0.329561 3:-69887951 MsG0380015417.01.T01:CDS
GGTTGCACCTTCGACAATTC+AGG 0.337232 3:-69888173 MsG0380015417.01.T01:CDS
AAGTGTGATCGGACTCTTAC+CGG 0.345955 3:+69888097 None:intergenic
CAACCGCCGACCTCCACCAC+TGG 0.365503 3:+69888265 None:intergenic
CCACCACTGGGTGTGGCCGC+TGG 0.368182 3:+69888278 None:intergenic
GCCCTCAGTTGCAGCTTATC+CGG 0.434820 3:-69888116 MsG0380015417.01.T01:CDS
GGTCGAATTTGGGGCCGAAC+TGG 0.442440 3:-69888194 MsG0380015417.01.T01:CDS
CAAATTGTTGTTGCAGCCAT+TGG 0.462016 3:+69887980 None:intergenic
ATCCCAGCTGGAACTTCATC+AGG 0.462218 3:-69888215 MsG0380015417.01.T01:CDS
AACAGATTTAACATCATCGT+TGG 0.472869 3:+69887833 None:intergenic
GGCCGTGGTAGTTGTCAAAC+CGG 0.480258 3:-69888152 MsG0380015417.01.T01:CDS
ACGAATGTTCCTTCACCGTC+TGG 0.483563 3:-69888301 MsG0380015417.01.T01:CDS
TTTGATATATCTGTAATTGA+GGG 0.490453 3:-69888035 MsG0380015417.01.T01:CDS
GTGGTTGAACTAAATTGCAT+TGG 0.493290 3:+69888002 None:intergenic
TGGCCTCTGGACATCCCAGC+TGG 0.500408 3:-69888227 MsG0380015417.01.T01:CDS
CGACCTGATGAAGTTCCAGC+TGG 0.502812 3:+69888212 None:intergenic
ATTGTTGTTGCAGCCATTGG+TGG 0.504768 3:+69887983 None:intergenic
TGTCGAAGGTGCAACCAGTT+CGG 0.507225 3:+69888180 None:intergenic
CCGAGGTCAAACATGGCCTC+TGG 0.508059 3:-69888240 MsG0380015417.01.T01:CDS
GCGGCCACACCCAGTGGTGG+AGG 0.514387 3:-69888275 MsG0380015417.01.T01:CDS
ACAGATTTAACATCATCGTT+GGG 0.517967 3:+69887834 None:intergenic
TACCGGATAAGCTGCAACTG+AGG 0.525880 3:+69888114 None:intergenic
CCGACCTCCACCACTGGGTG+TGG 0.532365 3:+69888271 None:intergenic
TTCCTTCACCGTCTGGCCAG+CGG 0.537414 3:-69888294 MsG0380015417.01.T01:CDS
CAGTGGTGGAGGTCGGCGGT+TGG 0.538162 3:-69888264 MsG0380015417.01.T01:CDS
ACCTTCGACAATTCAGGCCG+TGG 0.544357 3:-69888167 MsG0380015417.01.T01:CDS
GTGTATTCGGCAAGTGTGAT+CGG 0.554160 3:+69888086 None:intergenic
GAGGGCACCACCACAATCAC+CGG 0.555721 3:+69888133 None:intergenic
CAATTTAGTTCAACCACCAA+TGG 0.556901 3:-69887996 MsG0380015417.01.T01:CDS
CCAGCGGCCACACCCAGTGG+TGG 0.558577 3:-69888278 MsG0380015417.01.T01:CDS
TACTTTGTTGCATACATCAG+AGG 0.558852 3:+69887899 None:intergenic
AACCGCCGACCTCCACCACT+GGG 0.558958 3:+69888266 None:intergenic
GGGTGTGGCCGCTGGCCAGA+CGG 0.565515 3:+69888286 None:intergenic
CAACAAAGTACTAAACTGCA+TGG 0.571869 3:-69887886 MsG0380015417.01.T01:CDS
GGCCGCTGGCCAGACGGTGA+AGG 0.577852 3:+69888292 None:intergenic
CACCCAGTGGTGGAGGTCGG+CGG 0.578186 3:-69888268 MsG0380015417.01.T01:CDS
GTTAAATCTGTTACATGTCC+CGG 0.583524 3:-69887822 MsG0380015417.01.T01:CDS
GGAGGTCGGCGGTTGGACCG+AGG 0.593004 3:-69888257 MsG0380015417.01.T01:CDS
TGGCCAGCGGCCACACCCAG+TGG 0.600466 3:-69888281 MsG0380015417.01.T01:CDS
ACCGGATAAGCTGCAACTGA+GGG 0.603028 3:+69888115 None:intergenic
CCACACCCAGTGGTGGAGGT+CGG 0.605698 3:-69888271 MsG0380015417.01.T01:CDS
GGTTGGACCGAGGTCAAACA+TGG 0.606232 3:-69888247 MsG0380015417.01.T01:CDS
CCAGAGGCCATGTTTGACCT+CGG 0.610307 3:+69888240 None:intergenic
ACTTCATCAGGTCGAATTTG+GGG 0.621329 3:-69888203 MsG0380015417.01.T01:CDS
AGTTGTCAAACCGGTGATTG+TGG 0.630906 3:-69888143 MsG0380015417.01.T01:CDS
GTTCCAGCTGGGATGTCCAG+AGG 0.633410 3:+69888224 None:intergenic
GACCTGATGAAGTTCCAGCT+GGG 0.635258 3:+69888213 None:intergenic
GTTGGGTTGATGATAAGCAT+CGG 0.648766 3:+69887851 None:intergenic
GCCGAATACACACTTAATGG+TGG 0.649752 3:-69888074 MsG0380015417.01.T01:CDS
ACCACGGCCTGAATTGTCGA+AGG 0.649818 3:+69888166 None:intergenic
CACCGGTTTGACAACTACCA+CGG 0.669452 3:+69888150 None:intergenic
TGTCAAACCGGTGATTGTGG+TGG 0.678969 3:-69888140 MsG0380015417.01.T01:CDS
AAATCTGTTACATGTCCCGG+TGG 0.728153 3:-69887819 MsG0380015417.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTGATATATCTGTAATTGA+GGG - Chr3:69888106-69888125 MsG0380015417.01.T01:CDS 20.0%
!!! TTTTGATATATCTGTAATTG+AGG - Chr3:69888105-69888124 MsG0380015417.01.T01:CDS 20.0%
! ATTGATGTATCTTTGATTGA+TGG - Chr3:69888190-69888209 MsG0380015417.01.T01:CDS 25.0%
AACAGATTTAACATCATCGT+TGG + Chr3:69888311-69888330 None:intergenic 30.0%
ACAGATTTAACATCATCGTT+GGG + Chr3:69888310-69888329 None:intergenic 30.0%
! ACTTAATGGTGGAAACAATT+TGG - Chr3:69888078-69888097 MsG0380015417.01.T01:CDS 30.0%
! ATTTTATAGTTAGTACCACC+GGG + Chr3:69888340-69888359 None:intergenic 30.0%
! GATTTTATAGTTAGTACCAC+CGG + Chr3:69888341-69888360 None:intergenic 30.0%
AACTTCATCAGGTCGAATTT+GGG - Chr3:69887937-69887956 MsG0380015417.01.T01:CDS 35.0%
GTGGTTGAACTAAATTGCAT+TGG + Chr3:69888142-69888161 None:intergenic 35.0%
GTTAAATCTGTTACATGTCC+CGG - Chr3:69888319-69888338 MsG0380015417.01.T01:CDS 35.0%
TACTTTGTTGCATACATCAG+AGG + Chr3:69888245-69888264 None:intergenic 35.0%
TCCACCATTAAGTGTGTATT+CGG + Chr3:69888071-69888090 None:intergenic 35.0%
! CAACAAAGTACTAAACTGCA+TGG - Chr3:69888255-69888274 MsG0380015417.01.T01:CDS 35.0%
! CAATTTAGTTCAACCACCAA+TGG - Chr3:69888145-69888164 MsG0380015417.01.T01:CDS 35.0%
ACTTCATCAGGTCGAATTTG+GGG - Chr3:69887938-69887957 MsG0380015417.01.T01:CDS 40.0%
CAATGGCTGCAACAACAATT+TGG - Chr3:69888162-69888181 MsG0380015417.01.T01:CDS 40.0%
CTTGCCGAATACACACTTAA+TGG - Chr3:69888064-69888083 MsG0380015417.01.T01:CDS 40.0%
GAACTTCATCAGGTCGAATT+TGG - Chr3:69887936-69887955 MsG0380015417.01.T01:CDS 40.0%
! CAAATTGTTGTTGCAGCCAT+TGG + Chr3:69888164-69888183 None:intergenic 40.0%
!! GTTGGGTTGATGATAAGCAT+CGG + Chr3:69888293-69888312 None:intergenic 40.0%
AAATCTGTTACATGTCCCGG+TGG - Chr3:69888322-69888341 MsG0380015417.01.T01:CDS 45.0%
AAGTGTGATCGGACTCTTAC+CGG + Chr3:69888047-69888066 None:intergenic 45.0%
AGTTGTCAAACCGGTGATTG+TGG - Chr3:69887998-69888017 MsG0380015417.01.T01:CDS 45.0%
GCCGAATACACACTTAATGG+TGG - Chr3:69888067-69888086 MsG0380015417.01.T01:CDS 45.0%
GTGTATTCGGCAAGTGTGAT+CGG + Chr3:69888058-69888077 None:intergenic 45.0%
! ATTGTTGTTGCAGCCATTGG+TGG + Chr3:69888161-69888180 None:intergenic 45.0%
ACCGGATAAGCTGCAACTGA+GGG + Chr3:69888029-69888048 None:intergenic 50.0%
ACGAATGTTCCTTCACCGTC+TGG - Chr3:69887840-69887859 MsG0380015417.01.T01:CDS 50.0%
ATCCCAGCTGGAACTTCATC+AGG - Chr3:69887926-69887945 MsG0380015417.01.T01:CDS 50.0%
GACCTGATGAAGTTCCAGCT+GGG + Chr3:69887931-69887950 None:intergenic 50.0%
GGTTGCACCTTCGACAATTC+AGG - Chr3:69887968-69887987 MsG0380015417.01.T01:CDS 50.0%
TACCGGATAAGCTGCAACTG+AGG + Chr3:69888030-69888049 None:intergenic 50.0%
TGTCAAACCGGTGATTGTGG+TGG - Chr3:69888001-69888020 MsG0380015417.01.T01:CDS 50.0%
! TGTCGAAGGTGCAACCAGTT+CGG + Chr3:69887964-69887983 None:intergenic 50.0%
!! CACCGGTTTGACAACTACCA+CGG + Chr3:69887994-69888013 None:intergenic 50.0%
ACCACGGCCTGAATTGTCGA+AGG + Chr3:69887978-69887997 None:intergenic 55.0%
ACCTTCGACAATTCAGGCCG+TGG - Chr3:69887974-69887993 MsG0380015417.01.T01:CDS 55.0%
CCAGAGGCCATGTTTGACCT+CGG + Chr3:69887904-69887923 None:intergenic 55.0%
CGACCTGATGAAGTTCCAGC+TGG + Chr3:69887932-69887951 None:intergenic 55.0%
GCCCTCAGTTGCAGCTTATC+CGG - Chr3:69888025-69888044 MsG0380015417.01.T01:CDS 55.0%
GGCCGTGGTAGTTGTCAAAC+CGG - Chr3:69887989-69888008 MsG0380015417.01.T01:CDS 55.0%
GGTTGGACCGAGGTCAAACA+TGG - Chr3:69887894-69887913 MsG0380015417.01.T01:CDS 55.0%
CCGAGGTCAAACATGGCCTC+TGG - Chr3:69887901-69887920 MsG0380015417.01.T01:CDS 60.0%
GTTCCAGCTGGGATGTCCAG+AGG + Chr3:69887920-69887939 None:intergenic 60.0%
TTCCTTCACCGTCTGGCCAG+CGG - Chr3:69887847-69887866 MsG0380015417.01.T01:CDS 60.0%
! GGTCGAATTTGGGGCCGAAC+TGG - Chr3:69887947-69887966 MsG0380015417.01.T01:CDS 60.0%
!! GAGGGCACCACCACAATCAC+CGG + Chr3:69888011-69888030 None:intergenic 60.0%
AACCGCCGACCTCCACCACT+GGG + Chr3:69887878-69887897 None:intergenic 65.0%
TGGCCTCTGGACATCCCAGC+TGG - Chr3:69887914-69887933 MsG0380015417.01.T01:CDS 65.0%
! CCACACCCAGTGGTGGAGGT+CGG - Chr3:69887870-69887889 MsG0380015417.01.T01:CDS 65.0%
CAACCGCCGACCTCCACCAC+TGG + Chr3:69887879-69887898 None:intergenic 70.0%
CCGACCTCCACCACTGGGTG+TGG + Chr3:69887873-69887892 None:intergenic 70.0%
! CACCCAGTGGTGGAGGTCGG+CGG - Chr3:69887873-69887892 MsG0380015417.01.T01:CDS 70.0%
! CAGTGGTGGAGGTCGGCGGT+TGG - Chr3:69887877-69887896 MsG0380015417.01.T01:CDS 70.0%
CCACCACTGGGTGTGGCCGC+TGG + Chr3:69887866-69887885 None:intergenic 75.0%
CCAGCGGCCACACCCAGTGG+TGG - Chr3:69887863-69887882 MsG0380015417.01.T01:CDS 75.0%
GCGGCCACACCCAGTGGTGG+AGG - Chr3:69887866-69887885 MsG0380015417.01.T01:CDS 75.0%
GGAGGTCGGCGGTTGGACCG+AGG - Chr3:69887884-69887903 MsG0380015417.01.T01:CDS 75.0%
GGCCGCTGGCCAGACGGTGA+AGG + Chr3:69887852-69887871 None:intergenic 75.0%
GGGTGTGGCCGCTGGCCAGA+CGG + Chr3:69887858-69887877 None:intergenic 75.0%
TGGCCAGCGGCCACACCCAG+TGG - Chr3:69887860-69887879 MsG0380015417.01.T01:CDS 75.0%
Chromosome Type Strat End Strand Name
Chr3 gene 69887788 69888375 69887788 ID=MsG0380015417.01;Name=MsG0380015417.01
Chr3 mRNA 69887788 69888375 69887788 ID=MsG0380015417.01.T01;Parent=MsG0380015417.01;Name=MsG0380015417.01.T01;_AED=0.48;_eAED=0.48;_QI=0|-1|0|1|-1|1|1|0|195
Chr3 exon 69887788 69888375 69887788 ID=MsG0380015417.01.T01:exon:412;Parent=MsG0380015417.01.T01
Chr3 CDS 69887788 69888375 69887788 ID=MsG0380015417.01.T01:cds;Parent=MsG0380015417.01.T01
Gene Sequence

>MsG0380015417.01.T01

ATGTTCACTCTTTGCTTAATCTCTGCACAAGCAGCAAGATTCGATATAGTAAACGAATGTTCCTTCACCGTCTGGCCAGCGGCCACACCCAGTGGTGGAGGTCGGCGGTTGGACCGAGGTCAAACATGGCCTCTGGACATCCCAGCTGGAACTTCATCAGGTCGAATTTGGGGCCGAACTGGTTGCACCTTCGACAATTCAGGCCGTGGTAGTTGTCAAACCGGTGATTGTGGTGGTGCCCTCAGTTGCAGCTTATCCGGTAAGAGTCCGATCACACTTGCCGAATACACACTTAATGGTGGAAACAATTTGGATTATTTTGATATATCTGTAATTGAGGGTTTCAACATTCCAATGCAATTTAGTTCAACCACCAATGGCTGCAACAACAATTTGGACTATATTGATGTATCTTTGATTGATGGTTTCAACATTCGAATTCAAGTTAATGCAACCTCTGATGTATGCAACAAAGTACTAAACTGCATGGATTCTAATTGCTCCGATGCTTATCATCAACCCAACGATGATGTTAAATCTGTTACATGTCCCGGTGGTACTAACTATAAAATCGTCTTTTGCCCTTGA

Protein sequence

>MsG0380015417.01.T01

MFTLCLISAQAARFDIVNECSFTVWPAATPSGGGRRLDRGQTWPLDIPAGTSSGRIWGRTGCTFDNSGRGSCQTGDCGGALSCSLSGKSPITLAEYTLNGGNNLDYFDISVIEGFNIPMQFSSTTNGCNNNLDYIDVSLIDGFNIRIQVNATSDVCNKVLNCMDSNCSDAYHQPNDDVKSVTCPGGTNYKIVFCP*