AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1376880

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1376880 MtrunA17_Chr3g0115821 96.275 349 10 3 1 349 1 346 0.0 689
Msa1376880 MtrunA17_Chr4g0039971 67.005 197 53 5 1 194 2 189 5.62e-89 271
Msa1376880 MtrunA17_Chr5g0395281 72.956 159 39 2 1 155 1 159 1.25e-81 251
Msa1376880 MtrunA17_Chr5g0410961 59.113 203 70 3 1 200 1 193 4.20e-81 251
Msa1376880 MtrunA17_Chr6g0453471 77.444 133 30 0 1 133 1 133 4.88e-78 243
Msa1376880 MtrunA17_Chr7g0217741 58.659 179 68 1 1 179 1 173 3.35e-75 234
Msa1376880 MtrunA17_Chr4g0048511 73.881 134 34 1 1 133 1 134 4.85e-75 235
Msa1376880 MtrunA17_Chr2g0281071 76.154 130 30 1 1 129 1 130 1.12e-74 234
Msa1376880 MtrunA17_Chr4g0042671 59.140 186 67 2 1 183 1 180 2.36e-73 233
Msa1376880 MtrunA17_Chr2g0323411 73.282 131 35 0 1 131 1 131 1.33e-71 226
Msa1376880 MtrunA17_Chr8g0349261 73.077 130 33 2 1 128 1 130 6.66e-68 215
Msa1376880 MtrunA17_Chr3g0103281 51.256 199 85 1 1 199 1 187 4.86e-66 211
Msa1376880 MtrunA17_Chr5g0434571 71.094 128 37 0 1 128 37 164 3.37e-65 210
Msa1376880 MtrunA17_Chr4g0057031 69.531 128 39 0 1 128 1 128 4.40e-65 207
Msa1376880 MtrunA17_Chr7g0274581 74.138 116 30 0 1 116 1 116 2.34e-64 203
Msa1376880 MtrunA17_Chr3g0110351 70.079 127 38 0 1 127 1 127 6.73e-64 205
Msa1376880 MtrunA17_Chr4g0037141 65.625 128 44 0 1 128 1 128 1.56e-63 203
Msa1376880 MtrunA17_Chr7g0270891 65.909 132 45 0 1 132 1 132 1.84e-62 203
Msa1376880 MtrunA17_Chr1g0187761 72.881 118 32 0 1 118 1 118 2.09e-62 199
Msa1376880 MtrunA17_Chr6g0452271 54.194 155 67 1 1 151 1 155 5.55e-62 201
Msa1376880 MtrunA17_Chr3g0131121 64.122 131 47 0 1 131 1 131 6.17e-62 200
Msa1376880 MtrunA17_Chr1g0193371 64.394 132 47 0 1 132 1 132 7.96e-62 202
Msa1376880 MtrunA17_Chr8g0385321 63.636 132 48 0 1 132 1 132 1.09e-61 199
Msa1376880 MtrunA17_Chr1g0203411 70.339 118 35 0 1 118 1 118 1.20e-61 199
Msa1376880 MtrunA17_Chr1g0193801 64.394 132 47 0 1 132 1 132 1.62e-61 201
Msa1376880 MtrunA17_Chr5g0435101 62.400 125 47 0 3 127 2 126 3.40e-60 192
Msa1376880 MtrunA17_Chr7g0228891 66.406 128 43 0 1 128 1 128 4.45e-60 194
Msa1376880 MtrunA17_Chr4g0058631 64.122 131 47 0 1 131 1 131 5.74e-60 197
Msa1376880 MtrunA17_Chr7g0261281 70.339 118 35 0 1 118 1 118 7.33e-60 194
Msa1376880 MtrunA17_Chr7g0217221 69.828 116 35 0 1 116 1 116 1.67e-59 192
Msa1376880 MtrunA17_Chr1g0167691 70.085 117 35 0 1 117 1 117 2.28e-59 192
Msa1376880 MtrunA17_Chr1g0167661 70.940 117 34 0 1 117 1 117 2.74e-59 191
Msa1376880 MtrunA17_Chr2g0309911 66.116 121 41 0 6 126 5 125 4.87e-59 192
Msa1376880 MtrunA17_Chr3g0121241 66.129 124 42 0 5 128 35 158 8.46e-59 192
Msa1376880 MtrunA17_Chr3g0117091 59.559 136 55 0 1 136 1 136 1.84e-57 190
Msa1376880 MtrunA17_Chr7g0271241 65.649 131 45 0 1 131 1 131 2.89e-57 190
Msa1376880 MtrunA17_Chr4g0068061 67.241 116 38 0 1 116 1 116 5.09e-57 188
Msa1376880 MtrunA17_Chr7g0254411 65.600 125 41 1 1 123 1 125 1.88e-56 187
Msa1376880 MtrunA17_Chr4g0060721 67.241 116 38 0 1 116 2 117 3.11e-56 186
Msa1376880 MtrunA17_Chr5g0417821 65.000 120 42 0 11 130 6 125 3.99e-56 184
Msa1376880 MtrunA17_Chr1g0211161 62.698 126 47 0 3 128 4 129 4.78e-56 182
Msa1376880 MtrunA17_Chr2g0311221 70.000 110 33 0 2 111 4 113 4.80e-56 186
Msa1376880 MtrunA17_Chr7g0275911 67.241 116 38 0 1 116 1 116 5.17e-56 183
Msa1376880 MtrunA17_Chr8g0346561 68.103 116 37 0 1 116 1 116 5.50e-56 184
Msa1376880 MtrunA17_Chr3g0092401 64.706 119 42 0 1 119 2 120 7.22e-56 184
Msa1376880 MtrunA17_Chr2g0330041 48.555 173 79 2 1 166 1 170 1.21e-55 186
Msa1376880 MtrunA17_Chr2g0323351 64.407 118 42 0 1 118 1 118 1.27e-55 182
Msa1376880 MtrunA17_Chr8g0342521 60.976 123 48 0 1 123 1 123 4.00e-54 181
Msa1376880 MtrunA17_Chr4g0070611 64.706 119 42 0 1 119 1 119 5.58e-54 179
Msa1376880 MtrunA17_Chr5g0400821 44.053 227 102 7 1 222 1 207 6.92e-54 179
Msa1376880 MtrunA17_Chr4g0070641 66.379 116 39 0 1 116 1 116 1.01e-53 174
Msa1376880 MtrunA17_Chr8g0342541 62.393 117 44 0 1 117 1 117 1.50e-53 179
Msa1376880 MtrunA17_Chr4g0028311 60.000 130 51 1 1 129 1 130 1.53e-53 179
Msa1376880 MtrunA17_Chr1g0194951 60.448 134 52 1 1 133 1 134 1.96e-53 180
Msa1376880 MtrunA17_Chr1g0151941 54.422 147 62 3 1 144 1 145 2.45e-53 176
Msa1376880 MtrunA17_Chr6g0453211 65.766 111 38 0 1 111 1 111 5.82e-53 177
Msa1376880 MtrunA17_Chr4g0022931 62.393 117 43 1 1 116 1 117 1.27e-52 175
Msa1376880 MtrunA17_Chr7g0264641 61.667 120 45 1 1 119 1 120 2.77e-52 174
Msa1376880 MtrunA17_Chr4g0022901 62.712 118 43 1 1 117 1 118 4.29e-52 173
Msa1376880 MtrunA17_Chr4g0044421 60.800 125 48 1 3 126 2 126 6.97e-52 170
Msa1376880 MtrunA17_Chr8g0387421 60.345 116 46 0 1 116 1 116 1.09e-51 174
Msa1376880 MtrunA17_Chr4g0022911 61.017 118 45 1 1 117 1 118 1.19e-51 173
Msa1376880 MtrunA17_Chr3g0135311 56.618 136 58 1 1 135 1 136 2.90e-51 174
Msa1376880 MtrunA17_Chr1g0152011 63.559 118 42 1 1 117 1 118 3.98e-51 173
Msa1376880 MtrunA17_Chr4g0022881 62.281 114 43 0 1 114 1 114 4.75e-51 169
Msa1376880 MtrunA17_Chr8g0342481 56.115 139 57 3 1 138 1 136 9.42e-50 171
Msa1376880 MtrunA17_Chr5g0397231 60.909 110 43 0 1 110 1 110 1.07e-49 169
Msa1376880 MtrunA17_Chr2g0327351 63.964 111 39 1 1 110 1 111 1.14e-49 169
Msa1376880 MtrunA17_Chr7g0269831 64.655 116 41 0 1 116 1 116 1.33e-48 167
Msa1376880 MtrunA17_Chr4g0022891 61.062 113 44 0 1 113 1 113 7.21e-48 161
Msa1376880 MtrunA17_Chr4g0054391 63.636 110 39 1 1 109 1 110 8.50e-48 163
Msa1376880 MtrunA17_Chr2g0328771 63.810 105 38 0 12 116 20 124 1.99e-47 163
Msa1376880 MtrunA17_Chr4g0042611 75.000 88 22 0 1 88 1 88 2.14e-47 155
Msa1376880 MtrunA17_Chr4g0032401 62.162 111 42 0 12 122 17 127 2.25e-47 163
Msa1376880 MtrunA17_Chr1g0203441 66.038 106 36 0 13 118 14 119 3.50e-47 160
Msa1376880 MtrunA17_Chr3g0088461 65.138 109 38 0 8 116 18 126 4.27e-47 162
Msa1376880 MtrunA17_Chr6g0487491 57.143 126 45 2 1 117 1 126 6.68e-46 157
Msa1376880 MtrunA17_Chr1g0186061 61.111 108 42 0 8 115 16 123 6.86e-46 157
Msa1376880 MtrunA17_Chr7g0247131 40.426 235 117 4 43 270 9 227 1.21e-45 157
Msa1376880 MtrunA17_Chr4g0072751 60.360 111 43 1 1 110 1 111 4.37e-45 157
Msa1376880 MtrunA17_Chr4g0055981 60.526 114 45 0 12 125 55 168 1.11e-44 153
Msa1376880 MtrunA17_Chr1g0168661 58.182 110 46 0 6 115 15 124 6.39e-44 152
Msa1376880 MtrunA17_Chr6g0470971 60.000 110 44 0 9 118 11 120 1.32e-43 152
Msa1376880 MtrunA17_Chr1g0209661 57.391 115 49 0 8 122 23 137 1.89e-43 152
Msa1376880 MtrunA17_Chr1g0194291 53.571 140 64 1 2 140 11 150 2.30e-43 150
Msa1376880 MtrunA17_Chr6g0450101 55.372 121 52 1 1 119 1 121 2.58e-43 149
Msa1376880 MtrunA17_Chr7g0240821 56.198 121 53 0 17 137 6 126 6.98e-43 148
Msa1376880 MtrunA17_Chr5g0395221 72.727 88 24 0 1 88 1 88 2.24e-42 142
Msa1376880 MtrunA17_Chr3g0099131 58.716 109 45 0 10 118 39 147 2.54e-42 154
Msa1376880 MtrunA17_Chr8g0354661 61.538 104 40 0 12 115 37 140 4.83e-42 153
Msa1376880 MtrunA17_Chr1g0154031 60.577 104 41 0 12 115 76 179 6.39e-42 150
Msa1376880 MtrunA17_Chr7g0228231 58.879 107 44 0 12 118 14 120 7.18e-42 145
Msa1376880 MtrunA17_Chr3g0080861 59.615 104 42 0 12 115 37 140 7.79e-42 152
Msa1376880 MtrunA17_Chr5g0434911 55.856 111 49 0 7 117 16 126 1.77e-41 146
Msa1376880 MtrunA17_Chr2g0322521 61.682 107 41 0 9 115 26 132 1.80e-41 149
Msa1376880 MtrunA17_Chr1g0194301 50.000 134 66 1 8 140 29 162 4.86e-41 145
Msa1376880 MtrunA17_Chr5g0434931 57.009 107 46 0 11 117 34 140 5.37e-41 145
Msa1376880 MtrunA17_Chr5g0434831 59.813 107 43 0 11 117 6 112 1.01e-40 141
Msa1376880 MtrunA17_Chr8g0343831 56.897 116 46 1 1 116 1 112 1.15e-39 140
Msa1376880 MtrunA17_Chr7g0220341 57.798 109 44 1 11 117 24 132 1.18e-39 141
Msa1376880 MtrunA17_Chr1g0180391 56.364 110 47 1 12 120 19 128 1.14e-38 137
Msa1376880 MtrunA17_Chr2g0327821 57.692 104 44 0 12 115 6 109 1.79e-38 137
Msa1376880 MtrunA17_Chr5g0434841 57.944 107 45 0 11 117 19 125 1.87e-38 139
Msa1376880 MtrunA17_Chr2g0294811 63.636 88 32 0 1 88 1 88 4.80e-38 132
Msa1376880 MtrunA17_Chr7g0228991 56.075 107 47 0 11 117 28 134 4.81e-38 137
Msa1376880 MtrunA17_Chr2g0293911 55.000 120 54 0 8 127 20 139 6.34e-38 138
Msa1376880 MtrunA17_Chr8g0342511 63.218 87 32 0 1 87 1 87 1.17e-37 130
Msa1376880 MtrunA17_Chr8g0360111 56.863 102 44 0 11 112 24 125 1.42e-37 135
Msa1376880 MtrunA17_Chr4g0068921 50.758 132 61 1 8 139 20 147 2.17e-37 133
Msa1376880 MtrunA17_Chr2g0323321 58.511 94 38 1 1 94 1 93 2.18e-37 130
Msa1376880 MtrunA17_Chr8g0342531 59.551 89 36 0 1 89 1 89 4.24e-37 131
Msa1376880 MtrunA17_Chr4g0030881 53.097 113 46 1 13 118 8 120 9.67e-37 133
Msa1376880 MtrunA17_Chr5g0440781 50.442 113 54 2 13 124 13 124 4.55e-35 126
Msa1376880 MtrunA17_Chr1g0192411 51.304 115 56 0 1 115 1 115 7.64e-35 131
Msa1376880 MtrunA17_Chr5g0440761 50.442 113 54 2 13 124 13 124 1.30e-34 127
Msa1376880 MtrunA17_Chr5g0441141 50.442 113 54 2 13 124 13 124 1.63e-34 127
Msa1376880 MtrunA17_Chr8g0342461 56.667 90 38 1 1 89 1 90 2.18e-33 120
Msa1376880 MtrunA17_Chr3g0099141 57.471 87 37 0 8 94 36 122 2.99e-33 120
Msa1376880 MtrunA17_Chr8g0342471 56.667 90 38 1 1 89 1 90 6.68e-33 119
Msa1376880 MtrunA17_Chr4g0013361 50.962 104 50 1 12 114 10 113 9.62e-33 123
Msa1376880 MtrunA17_Chr8g0334881 48.148 108 55 1 8 114 6 113 1.33e-32 124
Msa1376880 MtrunA17_Chr5g0441131 48.673 113 56 2 13 124 10 121 1.13e-31 117
Msa1376880 MtrunA17_Chr6g0454921 35.829 187 104 4 14 186 15 199 3.31e-30 114
Msa1376880 MtrunA17_Chr4g0008551 52.381 105 47 2 14 117 38 140 9.08e-30 117
Msa1376880 MtrunA17_Chr3g0093811 54.945 91 41 0 43 133 13 103 2.34e-29 114
Msa1376880 MtrunA17_Chr5g0401731 48.182 110 54 2 14 122 15 122 3.34e-29 114
Msa1376880 MtrunA17_Chr7g0238631 54.717 106 45 2 12 116 111 214 5.95e-29 117
Msa1376880 MtrunA17_Chr4g0053431 49.057 106 45 2 14 115 5 105 3.34e-28 110
Msa1376880 MtrunA17_Chr7g0229101 64.789 71 25 0 43 113 3 73 1.13e-27 107
Msa1376880 MtrunA17_Chr5g0429661 45.299 117 60 3 1 115 108 222 1.77e-27 110
Msa1376880 MtrunA17_Chr7g0229131 58.667 75 31 0 43 117 3 77 3.35e-27 105
Msa1376880 MtrunA17_Chr3g0133601 47.059 102 53 1 14 115 37 137 4.00e-27 106
Msa1376880 MtrunA17_Chr3g0139671 47.170 106 53 2 12 116 83 186 1.64e-26 110
Msa1376880 MtrunA17_Chr6g0480581 47.059 102 51 2 14 114 4 103 9.36e-26 103
Msa1376880 MtrunA17_Chr1g0157731 47.170 106 53 2 12 116 89 192 1.93e-25 107
Msa1376880 MtrunA17_Chr1g0157731 36.000 100 62 2 14 112 39 137 1.86e-14 74.7
Msa1376880 MtrunA17_Chr5g0434901 59.155 71 29 0 43 113 4 74 4.75e-25 98.2
Msa1376880 MtrunA17_Chr5g0417621 39.474 152 69 5 10 140 130 279 9.78e-25 104
Msa1376880 MtrunA17_Chr4g0042501 48.544 103 50 2 14 115 105 205 1.41e-24 103
Msa1376880 MtrunA17_Chr4g0058991 46.602 103 52 2 14 115 209 309 1.49e-24 103
Msa1376880 MtrunA17_Chr3g0117511 46.602 103 52 2 14 115 183 283 5.46e-24 102
Msa1376880 MtrunA17_Chr6g0453751 48.913 92 38 2 11 93 19 110 1.24e-23 94.7
Msa1376880 MtrunA17_Chr6g0460661 47.959 98 48 2 14 110 16 111 1.62e-23 95.5
Msa1376880 MtrunA17_Chr5g0397841 48.485 99 48 2 12 109 108 204 3.30e-23 100
Msa1376880 MtrunA17_Chr3g0125801 46.789 109 55 2 8 115 10 116 5.70e-23 97.1
Msa1376880 MtrunA17_Chr6g0460671 45.631 103 53 2 14 115 99 199 8.73e-23 97.8
Msa1376880 MtrunA17_Chr5g0425591 50.000 82 40 1 13 93 10 91 9.32e-23 91.3
Msa1376880 MtrunA17_Chr5g0437321 44.860 107 55 3 8 112 12 116 1.01e-22 96.3
Msa1376880 MtrunA17_Chr5g0395231 40.667 150 65 5 79 223 8 138 2.12e-22 94.7
Msa1376880 MtrunA17_Chr7g0228531 43.137 102 56 2 14 115 220 319 3.10e-22 97.1
Msa1376880 MtrunA17_Chr7g0254261 43.103 116 58 3 1 115 81 189 1.33e-20 91.7
Msa1376880 MtrunA17_Chr1g0177901 46.512 86 45 1 25 110 5 89 4.77e-20 87.0
Msa1376880 MtrunA17_Chr7g0228401 45.349 86 46 1 25 110 290 374 2.71e-19 89.0
Msa1376880 MtrunA17_Chr7g0228481 41.237 97 55 2 14 110 220 314 1.64e-18 86.3
Msa1376880 MtrunA17_Chr7g0247141 63.830 47 16 1 1 46 1 47 4.97e-18 77.4
Msa1376880 MtrunA17_Chr7g0238651 37.624 101 61 1 17 115 10 110 6.24e-18 84.0
Msa1376880 MtrunA17_Chr7g0233061 39.000 100 52 3 14 110 180 273 2.25e-17 82.4
Msa1376880 MtrunA17_Chr5g0416341 39.394 99 59 1 17 115 29 126 4.43e-16 79.0
Msa1376880 MtrunA17_Chr4g0042621 42.424 99 48 2 88 183 14 106 1.77e-15 76.3
Msa1376880 MtrunA17_Chr1g0193901 48.810 84 41 2 12 93 11 94 6.35e-15 70.1
Msa1376880 MtrunA17_Chr1g0193891 48.810 84 41 2 12 93 11 94 6.35e-15 70.1
Msa1376880 MtrunA17_Chr1g0193871 48.810 84 41 2 12 93 11 94 6.35e-15 70.1
Msa1376880 MtrunA17_Chr1g0193881 48.810 84 41 2 12 93 11 94 6.35e-15 70.1
Msa1376880 MtrunA17_Chr8g0362231 36.364 99 62 1 17 115 25 122 2.40e-14 73.6
Msa1376880 MtrunA17_Chr5g0434871 61.364 44 17 0 74 117 2 45 8.00e-14 65.9
Msa1376880 MtrunA17_Chr3g0145551 70.270 37 11 0 92 128 2 38 7.56e-13 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1376880 AT1G34670.1 50.781 384 135 12 1 349 1 365 3.95e-111 328
Msa1376880 AT5G10280.1 49.859 355 149 10 1 348 1 333 2.12e-100 300
Msa1376880 AT5G16770.4 61.353 207 64 2 1 204 1 194 1.86e-89 271
Msa1376880 AT5G16770.3 61.353 207 64 2 1 204 1 194 1.86e-89 271
Msa1376880 AT5G16770.1 61.353 207 64 2 1 204 1 194 4.15e-89 271
Msa1376880 AT5G16770.2 61.353 207 64 2 1 204 1 194 4.15e-89 271
Msa1376880 AT5G65230.1 70.899 189 48 3 1 188 1 183 5.67e-87 265
Msa1376880 AT3G02940.2 50.000 282 119 5 1 274 1 268 6.44e-86 262
Msa1376880 AT3G02940.1 50.000 282 119 5 1 274 1 268 1.32e-85 261
Msa1376880 AT3G02940.3 50.000 282 119 5 1 274 1 268 1.32e-85 261
Msa1376880 AT5G15310.1 50.391 256 109 6 1 248 1 246 2.38e-79 246
Msa1376880 AT5G15310.4 62.431 181 61 3 1 179 1 176 7.67e-79 241
Msa1376880 AT5G15310.2 62.431 181 61 3 1 179 1 176 9.69e-79 244
Msa1376880 AT4G21440.1 67.262 168 40 3 1 154 1 167 2.77e-78 244
Msa1376880 AT3G01140.2 75.556 135 33 0 1 135 1 135 1.36e-77 242
Msa1376880 AT3G01140.1 75.000 132 33 0 4 135 47 178 2.48e-74 235
Msa1376880 AT4G05100.1 76.154 130 30 1 1 129 1 130 2.58e-74 233
Msa1376880 AT4G17785.2 72.993 137 36 1 1 136 1 137 7.55e-74 232
Msa1376880 AT4G17785.1 72.993 137 36 1 1 136 1 137 9.43e-74 233
Msa1376880 AT3G61250.1 75.000 128 32 0 1 128 1 128 1.46e-73 230
Msa1376880 AT4G28110.1 74.419 129 33 0 1 129 1 129 1.64e-73 229
Msa1376880 AT5G54230.1 71.223 139 40 0 1 139 1 139 1.18e-68 218
Msa1376880 AT4G22680.1 73.438 128 34 0 1 128 1 128 8.87e-68 214
Msa1376880 AT5G60890.1 68.750 128 40 0 1 128 1 128 5.55e-66 210
Msa1376880 AT5G16600.1 71.094 128 37 0 1 128 1 128 3.97e-65 209
Msa1376880 AT1G66230.1 70.312 128 38 0 1 128 1 128 8.76e-65 207
Msa1376880 AT4G12350.1 70.312 128 38 0 1 128 1 128 1.36e-64 206
Msa1376880 AT5G61420.2 67.969 128 41 0 1 128 1 128 3.63e-64 208
Msa1376880 AT5G07690.1 68.750 128 40 0 1 128 1 128 5.62e-64 206
Msa1376880 AT1G18570.1 68.750 128 39 1 1 127 1 128 6.43e-64 207
Msa1376880 AT1G35515.1 61.745 149 45 2 1 137 1 149 6.49e-64 202
Msa1376880 AT4G09460.1 67.717 127 41 0 1 127 1 127 9.16e-64 202
Msa1376880 AT4G38620.1 66.406 128 43 0 1 128 1 128 1.99e-63 203
Msa1376880 AT4G34990.1 67.188 128 42 0 1 128 1 128 2.81e-63 202
Msa1376880 AT1G22640.1 66.142 127 43 0 1 127 1 127 2.88e-63 202
Msa1376880 AT1G74080.1 67.176 131 43 0 1 131 1 131 3.07e-63 204
Msa1376880 AT5G07700.1 57.485 167 62 2 1 167 1 158 1.17e-62 203
Msa1376880 AT5G07700.2 57.485 167 62 2 1 167 1 158 1.17e-62 203
Msa1376880 AT2G16720.1 65.354 127 44 0 1 127 1 127 1.87e-62 201
Msa1376880 AT5G26660.1 67.969 128 41 0 1 128 1 128 1.92e-62 203
Msa1376880 AT5G56110.1 53.143 175 70 1 1 175 1 163 6.06e-62 201
Msa1376880 AT3G23250.1 74.138 116 30 0 1 116 1 116 9.73e-62 199
Msa1376880 AT1G09540.1 52.542 177 77 1 1 177 1 170 1.26e-61 201
Msa1376880 AT2G31180.1 51.955 179 75 1 1 168 1 179 1.53e-61 197
Msa1376880 AT5G62320.1 64.662 133 40 1 2 127 3 135 4.47e-61 196
Msa1376880 AT1G57560.1 62.121 132 50 0 1 132 1 132 5.85e-61 198
Msa1376880 AT1G57560.2 62.595 131 49 0 1 131 1 131 1.11e-60 196
Msa1376880 AT1G06180.1 72.414 116 32 0 1 116 1 116 1.98e-59 192
Msa1376880 AT4G01680.3 62.879 132 49 0 1 132 1 132 3.01e-59 191
Msa1376880 AT3G47600.1 68.908 119 37 0 1 119 1 119 3.31e-59 194
Msa1376880 AT5G14340.1 63.158 133 49 0 1 133 13 145 4.45e-59 192
Msa1376880 AT1G74650.1 62.044 137 51 1 1 136 1 137 4.57e-59 194
Msa1376880 AT1G56160.1 70.435 115 34 0 2 116 4 118 9.10e-59 192
Msa1376880 AT3G13540.1 64.000 125 45 0 4 128 15 139 1.20e-58 190
Msa1376880 AT4G01680.1 62.879 132 49 0 1 132 1 132 1.64e-58 192
Msa1376880 AT5G62470.2 67.227 119 39 0 1 119 1 119 3.90e-58 192
Msa1376880 AT3G12720.1 65.289 121 42 0 6 126 16 136 3.96e-58 191
Msa1376880 AT1G79180.1 68.376 117 37 0 2 118 4 120 3.16e-57 188
Msa1376880 AT1G74430.1 60.294 136 54 0 1 136 1 136 8.79e-57 186
Msa1376880 AT3G28910.1 66.393 122 41 0 1 122 1 122 1.14e-56 187
Msa1376880 AT5G62470.1 67.227 119 38 1 1 119 1 118 1.68e-56 187
Msa1376880 AT1G08810.1 68.966 116 36 0 1 116 1 116 1.99e-56 185
Msa1376880 AT5G49330.1 67.241 116 38 0 1 116 1 116 7.16e-56 186
Msa1376880 AT1G16490.1 67.826 115 37 0 2 116 4 118 2.27e-55 182
Msa1376880 AT4G01680.2 57.639 144 49 1 1 132 1 144 3.50e-55 184
Msa1376880 AT3G12820.1 66.379 116 39 0 3 118 5 120 5.10e-55 180
Msa1376880 AT3G62610.1 67.241 116 38 0 1 116 1 116 2.97e-54 182
Msa1376880 AT2G47460.1 60.000 135 54 0 1 135 1 135 3.03e-54 182
Msa1376880 AT1G18710.1 60.156 128 51 0 1 128 1 128 7.02e-54 178
Msa1376880 AT3G28470.1 60.448 134 53 0 1 134 1 134 4.31e-53 178
Msa1376880 AT3G13890.2 63.248 117 43 0 1 117 1 117 5.03e-53 179
Msa1376880 AT1G63910.1 55.970 134 59 0 1 134 1 134 5.72e-53 179
Msa1376880 AT5G23000.1 61.017 118 45 1 1 117 1 118 9.23e-52 175
Msa1376880 AT5G57620.1 63.559 118 42 1 1 117 1 118 3.79e-51 173
Msa1376880 AT3G49690.1 64.407 118 41 1 1 117 1 118 6.49e-51 172
Msa1376880 AT1G79180.2 52.667 150 38 1 2 118 4 153 9.20e-51 172
Msa1376880 AT5G65790.1 62.712 118 43 1 1 117 1 118 1.05e-50 173
Msa1376880 AT2G36890.1 59.055 127 51 1 1 126 1 127 2.23e-50 170
Msa1376880 AT2G36890.2 59.055 127 51 1 1 126 42 168 4.24e-50 171
Msa1376880 AT3G13890.1 58.730 126 43 1 1 117 1 126 6.52e-50 171
Msa1376880 AT4G37780.1 58.475 118 48 1 1 117 1 118 1.18e-47 163
Msa1376880 AT3G08500.1 66.667 105 35 0 12 116 30 134 1.12e-46 162
Msa1376880 AT5G12870.1 63.889 108 39 0 12 119 18 125 3.39e-46 159
Msa1376880 AT5G14750.1 53.676 136 55 3 13 147 17 145 2.54e-45 154
Msa1376880 AT5G40350.1 58.929 112 46 0 9 120 14 125 5.15e-45 154
Msa1376880 AT3G24310.1 62.617 107 40 0 9 115 15 121 6.26e-45 155
Msa1376880 AT3G30210.1 64.423 104 37 0 11 114 26 129 3.51e-44 153
Msa1376880 AT4G13480.1 62.617 107 40 0 9 115 3 109 6.81e-44 152
Msa1376880 AT3G27810.1 59.091 110 45 0 9 118 17 126 1.15e-43 150
Msa1376880 AT5G52260.1 55.634 142 58 2 13 151 13 152 1.27e-43 152
Msa1376880 AT3G11440.2 59.813 107 43 0 9 115 38 144 2.29e-43 156
Msa1376880 AT3G01530.1 54.167 120 55 0 8 127 21 140 3.10e-43 149
Msa1376880 AT5G06100.1 58.333 108 45 0 8 115 28 135 4.99e-43 155
Msa1376880 AT5G40330.1 57.407 108 46 0 9 116 9 116 5.12e-43 149
Msa1376880 AT1G48000.1 64.078 103 37 0 12 114 32 134 6.20e-43 149
Msa1376880 AT3G11440.3 59.813 107 43 0 9 115 38 144 8.81e-43 156
Msa1376880 AT3G11440.4 59.813 107 43 0 9 115 38 144 8.81e-43 156
Msa1376880 AT3G11440.1 59.813 107 43 0 9 115 38 144 8.81e-43 156
Msa1376880 AT2G32460.2 60.000 105 42 0 11 115 5 109 8.93e-43 154
Msa1376880 AT2G32460.1 60.000 105 42 0 11 115 17 121 9.38e-43 155
Msa1376880 AT5G06100.5 58.333 108 45 0 8 115 28 135 1.64e-42 155
Msa1376880 AT5G06100.2 58.333 108 45 0 8 115 28 135 1.64e-42 155
Msa1376880 AT5G06100.3 58.333 108 45 0 8 115 28 135 1.64e-42 155
Msa1376880 AT5G06100.4 58.333 108 45 0 8 115 28 135 1.64e-42 155
Msa1376880 AT5G35550.1 57.627 118 46 1 12 129 14 127 3.32e-42 147
Msa1376880 AT3G27920.1 56.190 105 46 0 13 117 15 119 5.35e-42 146
Msa1376880 AT4G25560.1 63.208 106 39 0 13 118 11 116 9.91e-42 147
Msa1376880 AT3G48920.1 60.784 102 40 0 13 114 19 120 3.05e-41 145
Msa1376880 AT5G55020.1 58.879 107 44 0 12 118 26 132 5.83e-41 150
Msa1376880 AT2G26960.1 56.364 110 47 1 12 121 20 128 6.83e-41 149
Msa1376880 AT5G52600.1 55.752 113 47 1 6 115 3 115 1.10e-40 142
Msa1376880 AT1G66370.1 57.391 115 45 1 1 115 1 111 1.32e-40 143
Msa1376880 AT4G26930.1 58.252 103 43 0 12 114 19 121 1.85e-40 147
Msa1376880 AT5G26660.2 73.810 84 22 0 45 128 14 97 4.49e-40 144
Msa1376880 AT1G25340.1 53.913 115 53 0 13 127 19 133 6.13e-40 142
Msa1376880 AT3G53200.1 58.879 107 44 0 9 115 6 112 7.24e-40 141
Msa1376880 AT3G06490.1 53.788 132 57 1 8 139 15 142 2.36e-39 142
Msa1376880 AT2G47190.1 53.043 115 54 0 8 122 16 130 2.39e-39 140
Msa1376880 AT1G68320.1 54.955 111 50 0 12 122 19 129 6.41e-39 140
Msa1376880 AT3G46130.1 57.009 107 46 0 9 115 6 112 1.13e-38 138
Msa1376880 AT5G59780.3 57.282 103 44 0 13 115 9 111 8.28e-38 135
Msa1376880 AT1G66380.1 61.321 106 41 0 10 115 6 111 2.39e-37 131
Msa1376880 AT5G49620.1 50.000 132 62 1 8 139 22 149 4.03e-37 135
Msa1376880 AT1G56650.1 60.377 106 42 0 10 115 6 111 3.75e-36 131
Msa1376880 AT1G66390.1 60.000 105 42 0 11 115 7 111 2.11e-35 129
Msa1376880 AT1G25340.2 51.304 115 51 1 13 127 19 128 2.69e-35 130
Msa1376880 AT1G25340.3 51.304 115 51 1 13 127 19 128 4.69e-35 130
Msa1376880 AT3G60460.1 52.885 104 48 1 12 114 11 114 8.76e-35 129
Msa1376880 AT3G47600.2 72.000 75 21 0 45 119 39 113 3.35e-34 128
Msa1376880 AT3G12820.2 73.239 71 19 0 48 118 2 72 1.15e-33 123
Msa1376880 AT5G49620.2 45.205 146 62 2 8 139 22 163 1.69e-33 126
Msa1376880 AT2G26950.1 51.000 100 49 0 12 111 16 115 3.92e-32 124
Msa1376880 AT5G14750.3 54.545 110 39 4 39 147 12 111 4.57e-32 118
Msa1376880 AT5G40350.2 64.474 76 27 0 45 120 5 80 3.06e-31 116
Msa1376880 AT5G35550.2 65.385 78 27 0 39 116 44 121 5.17e-31 118
Msa1376880 AT3G27810.2 63.514 74 27 0 45 118 4 77 1.16e-29 112
Msa1376880 AT3G53200.2 69.014 71 22 0 45 115 9 79 1.80e-29 112
Msa1376880 AT1G22640.3 66.667 69 23 0 59 127 2 70 1.85e-29 112
Msa1376880 AT3G46130.3 65.278 72 25 0 44 115 9 80 8.22e-29 111
Msa1376880 AT5G59780.2 66.197 71 24 0 45 115 20 90 9.19e-29 111
Msa1376880 AT3G46130.4 66.197 71 24 0 45 115 20 90 1.54e-28 111
Msa1376880 AT4G37260.1 52.427 103 46 2 14 115 13 113 1.74e-28 113
Msa1376880 AT5G02320.1 51.887 106 48 2 12 116 125 228 5.04e-28 115
Msa1376880 AT5G02320.2 51.887 106 48 2 12 116 125 228 5.04e-28 115
Msa1376880 AT5G02320.3 51.887 106 48 2 12 116 65 168 6.44e-28 114
Msa1376880 AT1G18960.1 45.669 127 62 4 10 134 6 127 6.58e-28 111
Msa1376880 AT2G39880.1 50.943 106 43 2 14 115 50 150 7.66e-28 112
Msa1376880 AT3G09230.1 47.273 110 49 2 14 119 55 159 2.60e-27 111
Msa1376880 AT5G58850.1 49.524 105 50 2 12 115 103 205 2.79e-27 111
Msa1376880 AT1G17950.1 30.315 254 142 9 14 255 5 235 3.35e-27 108
Msa1376880 AT1G66380.3 67.123 73 24 0 43 115 6 78 4.32e-27 103
Msa1376880 AT2G23290.1 51.456 103 47 2 14 115 13 113 5.33e-27 108
Msa1376880 AT3G09370.1 51.429 105 48 2 12 115 128 230 5.41e-27 111
Msa1376880 AT3G09370.2 51.429 105 48 2 12 115 133 235 5.59e-27 111
Msa1376880 AT3G09370.3 51.429 105 48 2 12 115 141 243 6.53e-27 111
Msa1376880 AT1G71030.1 52.222 90 42 1 38 127 7 95 7.02e-27 105
Msa1376880 AT1G71030.2 55.844 77 34 0 51 127 5 81 7.43e-27 105
Msa1376880 AT5G67300.1 49.515 103 49 2 14 115 6 106 1.11e-26 107
Msa1376880 AT5G40360.1 45.714 105 55 2 12 116 156 258 1.61e-26 108
Msa1376880 AT3G50060.1 48.544 103 50 2 14 115 6 106 1.67e-26 107
Msa1376880 AT5G11050.1 47.573 103 51 2 14 115 105 205 3.98e-26 108
Msa1376880 AT4G18770.1 39.716 141 79 4 9 149 212 346 1.16e-25 107
Msa1376880 AT3G55730.1 46.364 110 50 2 14 119 56 160 2.25e-25 105
Msa1376880 AT3G27785.1 43.925 107 59 1 9 115 184 289 2.49e-25 106
Msa1376880 AT4G32730.5 46.226 106 54 2 12 116 85 188 2.65e-25 107
Msa1376880 AT4G32730.5 36.000 100 62 2 14 112 35 133 3.03e-14 74.7
Msa1376880 AT4G32730.4 46.226 106 54 2 12 116 85 188 2.65e-25 107
Msa1376880 AT4G32730.4 36.000 100 62 2 14 112 35 133 3.03e-14 74.7
Msa1376880 AT4G32730.3 46.226 106 54 2 12 116 85 188 2.65e-25 107
Msa1376880 AT4G32730.3 36.000 100 62 2 14 112 35 133 3.03e-14 74.7
Msa1376880 AT4G32730.2 46.226 106 54 2 12 116 85 188 2.65e-25 107
Msa1376880 AT4G32730.2 36.000 100 62 2 14 112 35 133 3.03e-14 74.7
Msa1376880 AT4G32730.1 46.226 106 54 2 12 116 85 188 2.82e-25 107
Msa1376880 AT4G32730.1 36.000 100 62 2 14 112 35 133 2.98e-14 74.3
Msa1376880 AT1G69560.1 39.394 132 74 3 9 139 102 228 4.09e-25 103
Msa1376880 AT1G69560.2 39.394 132 74 3 9 139 118 244 4.21e-25 104
Msa1376880 AT3G23250.2 74.138 58 15 0 59 116 2 59 5.70e-25 101
Msa1376880 AT5G11510.3 44.762 105 57 1 12 116 79 182 1.21e-24 105
Msa1376880 AT5G11510.3 32.000 100 66 2 14 112 29 127 4.41e-11 64.7
Msa1376880 AT5G11510.1 44.762 105 57 1 12 116 79 182 1.21e-24 105
Msa1376880 AT5G11510.1 32.000 100 66 2 14 112 29 127 4.41e-11 64.7
Msa1376880 AT5G11510.4 44.762 105 57 1 12 116 79 182 1.21e-24 105
Msa1376880 AT5G11510.4 32.000 100 66 2 14 112 29 127 4.41e-11 64.7
Msa1376880 AT5G11510.2 44.762 105 57 1 12 116 79 182 1.40e-24 105
Msa1376880 AT5G11510.2 32.000 100 66 2 14 112 29 127 3.91e-11 64.7
Msa1376880 AT5G11510.5 44.762 105 57 1 12 116 79 182 1.58e-24 105
Msa1376880 AT5G11510.5 32.000 100 66 2 14 112 29 127 4.15e-11 64.7
Msa1376880 AT1G26780.1 46.667 105 53 2 12 115 96 198 1.36e-23 99.0
Msa1376880 AT1G73410.1 33.468 248 139 9 14 255 6 233 1.48e-23 97.8
Msa1376880 AT1G26780.2 46.667 105 53 2 12 115 96 198 1.81e-23 100
Msa1376880 AT1G66380.2 50.000 98 48 1 11 107 7 104 2.38e-23 93.6
Msa1376880 AT5G14750.4 52.222 90 35 3 59 147 2 84 6.54e-23 93.6
Msa1376880 AT5G14750.2 52.222 90 35 3 59 147 2 84 6.54e-23 93.6
Msa1376880 AT1G73410.2 48.113 106 52 2 14 118 6 109 6.91e-23 95.1
Msa1376880 AT2G25230.1 42.857 112 61 2 4 114 16 125 3.52e-22 94.0
Msa1376880 AT4G33450.1 40.351 114 60 3 3 115 13 119 3.69e-22 94.4
Msa1376880 AT3G29020.1 38.710 124 69 2 14 131 65 187 2.13e-21 92.0
Msa1376880 AT5G17800.1 44.118 102 56 1 14 115 93 193 3.36e-21 93.2
Msa1376880 AT3G29020.2 38.710 124 69 2 14 131 67 189 1.04e-20 91.3
Msa1376880 AT5G15310.3 36.095 169 89 7 88 247 9 167 3.55e-19 85.9
Msa1376880 AT4G00540.2 42.857 112 58 3 12 119 101 210 1.01e-18 87.0
Msa1376880 AT4G00540.1 42.857 112 58 3 12 119 99 208 1.87e-18 86.3
Msa1376880 AT5G61420.1 70.833 48 14 0 81 128 2 49 1.90e-18 84.7
Msa1376880 AT5G40430.1 36.036 111 69 1 4 114 44 152 1.58e-17 81.6
Msa1376880 AT2G37630.1 37.624 101 61 1 17 115 7 107 1.26e-16 80.5
Msa1376880 AT1G74650.3 55.000 60 26 1 78 136 2 61 2.96e-16 77.8
Msa1376880 AT1G14350.2 39.394 99 59 1 17 115 28 125 3.71e-16 79.7
Msa1376880 AT1G14350.1 39.394 99 59 1 17 115 28 125 3.71e-16 79.7
Msa1376880 AT4G28110.2 69.048 42 13 0 88 129 4 45 7.86e-16 75.5
Msa1376880 AT2G02820.3 38.384 99 60 1 17 115 33 130 1.00e-15 77.4
Msa1376880 AT4G25560.2 70.833 48 14 0 71 118 3 50 1.02e-15 75.5
Msa1376880 AT2G02820.2 38.384 99 60 1 17 115 33 130 1.09e-15 78.6
Msa1376880 AT2G02820.1 38.384 99 60 1 17 115 33 130 1.12e-15 78.2
Msa1376880 AT5G39700.1 40.625 96 56 1 15 110 57 151 4.54e-15 73.2
Msa1376880 AT3G28910.2 62.000 50 17 1 78 127 2 49 5.52e-14 71.2
Msa1376880 AT5G59780.1 62.791 43 16 0 73 115 4 46 2.48e-13 67.8
Msa1376880 AT3G46130.2 62.791 43 16 0 73 115 4 46 3.88e-13 67.8
Msa1376880 AT1G22640.2 65.000 40 14 0 88 127 16 55 4.03e-13 67.4
Msa1376880 AT5G14340.2 58.696 46 19 0 88 133 10 55 7.81e-13 66.6
Msa1376880 AT1G74430.2 51.852 54 26 0 77 130 8 61 1.42e-12 66.2
Msa1376880 AT1G74650.2 52.727 55 25 1 83 136 2 56 1.20e-11 64.7
Msa1376880 AT3G18100.3 33.333 96 63 1 13 108 497 591 2.41e-11 65.5
Msa1376880 AT3G18100.1 33.333 96 63 1 13 108 545 639 2.64e-11 65.5
Msa1376880 AT3G18100.4 33.333 96 63 1 13 108 384 478 3.39e-11 65.1
Msa1376880 AT3G18100.2 33.333 96 63 1 13 108 332 426 3.91e-11 64.7

Find 76 sgRNAs with CRISPR-Local

Find 198 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAATGAGATAAAGAATTTC+TGG 0.217847 tig0019834:+12277 Msa1376880:CDS
TAAGGTGGACCAATTATTTA+AGG 0.230486 tig0019834:+11713 Msa1376880:CDS
AATATCAGGCCTTAAATAAT+TGG 0.239292 tig0019834:-11722 None:intergenic
AGCAAACATGACAGAACTTA+TGG 0.291406 tig0019834:+12401 Msa1376880:CDS
GAGTCCAAGGTCCTTTCTTT+AGG 0.299866 tig0019834:-11474 None:intergenic
TAAGATAAATCATGCATAAT+GGG 0.300700 tig0019834:-13002 None:intergenic
TTGTTCCATGTTTGTGATCA+TGG 0.305258 tig0019834:-12583 None:intergenic
CTTCATCTTCATTCAATCCT+TGG 0.313241 tig0019834:+11784 Msa1376880:CDS
ATCTCATTATCTGTTCTTCC+AGG 0.321841 tig0019834:-12264 None:intergenic
GACCCTCTCCAGTATCTTAT+TGG 0.336984 tig0019834:+12958 Msa1376880:CDS
GCATTTAGAGGAACAGATAT+TGG 0.337009 tig0019834:-12873 None:intergenic
GATTGTGTTTAATAAACTTA+AGG 0.341619 tig0019834:-12613 None:intergenic
TGTTTGTGATCATGGCATTT+TGG 0.355569 tig0019834:-12575 None:intergenic
TTAAGATAAATCATGCATAA+TGG 0.364715 tig0019834:-13003 None:intergenic
ATTGTGTTTAATAAACTTAA+GGG 0.382518 tig0019834:-12612 None:intergenic
TGTGAAAGAGAACATAATAA+TGG 0.389720 tig0019834:+12641 Msa1376880:CDS
GTGGAAACAAGATCAGTTCT+TGG 0.391507 tig0019834:-12357 None:intergenic
ATATACAAACCAGCTAGCTT+AGG 0.400759 tig0019834:-11562 None:intergenic
GTTCTTGGTTGATGAGTCAT+TGG 0.401091 tig0019834:-12342 None:intergenic
TTTGCTAAAGCTAGTAGATA+TGG 0.401581 tig0019834:-12384 None:intergenic
TTCATCAACTGTTGCAAAGT+TGG 0.405862 tig0019834:-12817 None:intergenic
ATAGATGTGGAAAGAGTTGT+AGG 0.419958 tig0019834:+11689 Msa1376880:CDS
AGTTCAGACCAATAAGATAC+TGG 0.423026 tig0019834:-12966 None:intergenic
AATAATGGACTGTTCACAAC+TGG 0.429961 tig0019834:+12656 Msa1376880:CDS
ATCTGTTCCTCTAAATGCTA+TGG 0.430587 tig0019834:+12878 Msa1376880:CDS
GAAATCCCCATAGCATTTAG+AGG 0.431719 tig0019834:-12885 None:intergenic
AAGATTGGAGTAAATATTGA+AGG 0.443048 tig0019834:-12515 None:intergenic
AGCAACATGGCCATGGAAGT+TGG 0.453352 tig0019834:+11530 Msa1376880:CDS
TTATAGAAGAATTTGAAGAT+TGG 0.453453 tig0019834:-12530 None:intergenic
TATACAAACCAGCTAGCTTA+GGG 0.459441 tig0019834:-11561 None:intergenic
TCTAGCTATGGAGGAGGAGG+AGG 0.460845 tig0019834:+12933 Msa1376880:CDS
AGCTATGGAGGAGGAGGAGG+AGG 0.461006 tig0019834:+12936 Msa1376880:CDS
TCTGTTCCTCTAAATGCTAT+GGG 0.463500 tig0019834:+12879 Msa1376880:CDS
TGATCTTCTTCAGGAGTCCA+AGG 0.474736 tig0019834:-11487 None:intergenic
AGCAGCTGCACTTCTAGCTA+TGG 0.500161 tig0019834:+12921 Msa1376880:CDS
TGAAAGAGACTTGTTGTTGT+GGG 0.508365 tig0019834:-12746 None:intergenic
ACAGATATTGGAGCAGAAGA+TGG 0.509435 tig0019834:-12861 None:intergenic
AGCACACTTTGGTGGTGGAG+TGG 0.513813 tig0019834:-12708 None:intergenic
AGAGCACTCCCTAAGCTAGC+TGG 0.515419 tig0019834:+11553 Msa1376880:CDS
ATCATCATAATCAGTCATCA+TGG 0.518139 tig0019834:+12424 Msa1376880:CDS
TTTGCAGGTCTTAATAGATG+TGG 0.520438 tig0019834:+11676 Msa1376880:intron
AAAGTACGTACTTGTTTCCA+AGG 0.530037 tig0019834:-11801 None:intergenic
GTGGAAAGAGTTGTAGGCTA+AGG 0.531197 tig0019834:+11695 Msa1376880:CDS
GATGAGAGTGGCCTAAAGAA+AGG 0.535518 tig0019834:+11463 Msa1376880:CDS
GAAAGAGTTGTAGGCTAAGG+TGG 0.541388 tig0019834:+11698 Msa1376880:CDS
GCAATTGCCACACATCTACC+TGG 0.544495 tig0019834:+12246 Msa1376880:CDS
AATGCTATGGGGATTTCAGC+AGG 0.548148 tig0019834:+12891 Msa1376880:CDS
TAAAGCTAGTAGATATGGTA+TGG 0.550765 tig0019834:-12379 None:intergenic
AAAAGTGGGGTAGCACACTT+TGG 0.555610 tig0019834:-12719 None:intergenic
GGGGTAGCACACTTTGGTGG+TGG 0.564100 tig0019834:-12713 None:intergenic
ACTTCTAGCTATGGAGGAGG+AGG 0.567377 tig0019834:+12930 Msa1376880:CDS
TTAAGGCCTGATATTAAGAG+AGG 0.570407 tig0019834:+11730 Msa1376880:CDS
AGGCCACTCTCATCACAACA+TGG 0.571440 tig0019834:-11454 None:intergenic
TGCACTTCTAGCTATGGAGG+AGG 0.572187 tig0019834:+12927 Msa1376880:CDS
CAGTTGATGAAACATCATCA+TGG 0.575439 tig0019834:+12829 Msa1376880:CDS
CACATTCAGCAACATGGCCA+TGG 0.584236 tig0019834:+11523 Msa1376880:CDS
GGAGTGCTCTCCAACTTCCA+TGG 0.591428 tig0019834:-11540 None:intergenic
TCATCATAATCAGTCATCAT+GGG 0.591481 tig0019834:+12425 Msa1376880:CDS
TTGAATAATGAACAAAGTCA+AGG 0.593810 tig0019834:+12783 Msa1376880:CDS
CTGAAAGAGACTTGTTGTTG+TGG 0.596864 tig0019834:-12747 None:intergenic
AGCTGCACTTCTAGCTATGG+AGG 0.598375 tig0019834:+12924 Msa1376880:CDS
GGCCACTCTCATCACAACAT+GGG 0.598870 tig0019834:-11453 None:intergenic
GTGGCCTAAAGAAAGGACCT+TGG 0.604603 tig0019834:+11470 Msa1376880:CDS
AGTGGGGTAGCACACTTTGG+TGG 0.613172 tig0019834:-12716 None:intergenic
AGCTAGTAGATATGGTATGG+TGG 0.620436 tig0019834:-12376 None:intergenic
AAGATAAATCATGCATAATG+GGG 0.630533 tig0019834:-13001 None:intergenic
AAATGCCATGATCACAAACA+TGG 0.631165 tig0019834:+12578 Msa1376880:CDS
GTTGAACACATTCAGCAACA+TGG 0.636416 tig0019834:+11517 Msa1376880:CDS
GACCAATAAGATACTGGAGA+GGG 0.637113 tig0019834:-12960 None:intergenic
GCCACTCTCATCACAACATG+GGG 0.657364 tig0019834:-11452 None:intergenic
CTGTTCCTCTAAATGCTATG+GGG 0.667441 tig0019834:+12880 Msa1376880:CDS
ATTAGTAACACACAATGGGA+AGG 0.669235 tig0019834:+11428 None:intergenic
AGACCAATAAGATACTGGAG+AGG 0.671942 tig0019834:-12961 None:intergenic
AATAATGAACAAAGTCAAGG+TGG 0.687399 tig0019834:+12786 Msa1376880:CDS
TGTTCTTCCAGGTAGATGTG+TGG 0.695449 tig0019834:-12253 None:intergenic
TCCCCATGTTGTGATGAGAG+TGG 0.715025 tig0019834:+11451 Msa1376880:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTGCAATAACTATTAATATA+TGG + tig0019834:11603-11622 Msa1376880:intron 15.0%
!! AAGAAAAAAAAATATGAATG+AGG - tig0019834:11651-11670 None:intergenic 15.0%
!!! ATTTTAAGATTTGATATCTT+TGG - tig0019834:11886-11905 None:intergenic 15.0%
!!! TAAGATTTTTTTTTTTTTGG+TGG - tig0019834:11912-11931 None:intergenic 15.0%
!! ATTGTGTTTAATAAACTTAA+GGG - tig0019834:12615-12634 None:intergenic 15.0%
!! TTGCAATAACTATTAATATA+TGG + tig0019834:11603-11622 Msa1376880:intron 15.0%
!! AAGAAAAAAAAATATGAATG+AGG - tig0019834:11651-11670 None:intergenic 15.0%
!!! ATTTTAAGATTTGATATCTT+TGG - tig0019834:11886-11905 None:intergenic 15.0%
!!! TAAGATTTTTTTTTTTTTGG+TGG - tig0019834:11912-11931 None:intergenic 15.0%
!! ATTGTGTTTAATAAACTTAA+GGG - tig0019834:12615-12634 None:intergenic 15.0%
!! CATAATTCAAATGATAGTAT+TGG - tig0019834:11944-11963 None:intergenic 20.0%
!! ATAATGAGATAAAGAATTTC+TGG + tig0019834:12277-12296 Msa1376880:CDS 20.0%
!! TTATAGAAGAATTTGAAGAT+TGG - tig0019834:12533-12552 None:intergenic 20.0%
!! GATTGTGTTTAATAAACTTA+AGG - tig0019834:12616-12635 None:intergenic 20.0%
!! TAAGATAAATCATGCATAAT+GGG - tig0019834:13005-13024 None:intergenic 20.0%
!! TTAAGATAAATCATGCATAA+TGG - tig0019834:13006-13025 None:intergenic 20.0%
!! CATAATTCAAATGATAGTAT+TGG - tig0019834:11944-11963 None:intergenic 20.0%
!! ATAATGAGATAAAGAATTTC+TGG + tig0019834:12277-12296 Msa1376880:CDS 20.0%
!! TTATAGAAGAATTTGAAGAT+TGG - tig0019834:12533-12552 None:intergenic 20.0%
!! GATTGTGTTTAATAAACTTA+AGG - tig0019834:12616-12635 None:intergenic 20.0%
!! TAAGATAAATCATGCATAAT+GGG - tig0019834:13005-13024 None:intergenic 20.0%
!! TTAAGATAAATCATGCATAA+TGG - tig0019834:13006-13025 None:intergenic 20.0%
! ATAGTTATTGCAAGATATAG+AGG - tig0019834:11596-11615 None:intergenic 25.0%
!!! TTTTTTTCTTGCAATTTTGC+AGG + tig0019834:11661-11680 Msa1376880:intron 25.0%
! AATATCAGGCCTTAAATAAT+TGG - tig0019834:11725-11744 None:intergenic 25.0%
!! AATTTTCCTCTCTTAATATC+AGG - tig0019834:11739-11758 None:intergenic 25.0%
! TATCTTTGGTTATATTTGCT+AGG - tig0019834:11872-11891 None:intergenic 25.0%
!!! TAAACGAGTTGAATTTTCAA+CGG - tig0019834:12083-12102 None:intergenic 25.0%
! TAGTACAAATGAAATTCTCT+AGG + tig0019834:12149-12168 Msa1376880:intron 25.0%
!! AAGAAAAAGTTGATTCAGAT+GGG + tig0019834:12312-12331 Msa1376880:CDS 25.0%
! AAGATTGGAGTAAATATTGA+AGG - tig0019834:12518-12537 None:intergenic 25.0%
! TGTGAAAGAGAACATAATAA+TGG + tig0019834:12641-12660 Msa1376880:CDS 25.0%
! TTGAATAATGAACAAAGTCA+AGG + tig0019834:12783-12802 Msa1376880:CDS 25.0%
! AAGATAAATCATGCATAATG+GGG - tig0019834:13004-13023 None:intergenic 25.0%
! ATAGTTATTGCAAGATATAG+AGG - tig0019834:11596-11615 None:intergenic 25.0%
!!! TTTTTTTCTTGCAATTTTGC+AGG + tig0019834:11661-11680 Msa1376880:intron 25.0%
! AATATCAGGCCTTAAATAAT+TGG - tig0019834:11725-11744 None:intergenic 25.0%
!! AATTTTCCTCTCTTAATATC+AGG - tig0019834:11739-11758 None:intergenic 25.0%
! TATCTTTGGTTATATTTGCT+AGG - tig0019834:11872-11891 None:intergenic 25.0%
!!! TAAACGAGTTGAATTTTCAA+CGG - tig0019834:12083-12102 None:intergenic 25.0%
! TAGTACAAATGAAATTCTCT+AGG + tig0019834:12149-12168 Msa1376880:intron 25.0%
!! AAGAAAAAGTTGATTCAGAT+GGG + tig0019834:12312-12331 Msa1376880:CDS 25.0%
! AAGATTGGAGTAAATATTGA+AGG - tig0019834:12518-12537 None:intergenic 25.0%
! TGTGAAAGAGAACATAATAA+TGG + tig0019834:12641-12660 Msa1376880:CDS 25.0%
! TTGAATAATGAACAAAGTCA+AGG + tig0019834:12783-12802 Msa1376880:CDS 25.0%
! AAGATAAATCATGCATAATG+GGG - tig0019834:13004-13023 None:intergenic 25.0%
TAAGGTGGACCAATTATTTA+AGG + tig0019834:11713-11732 Msa1376880:CDS 30.0%
! AGGAAAATTTTCTCAAGAAG+AGG + tig0019834:11750-11769 Msa1376880:CDS 30.0%
! GAAGAAAAAGTTGATTCAGA+TGG + tig0019834:12311-12330 Msa1376880:CDS 30.0%
TAAAGCTAGTAGATATGGTA+TGG - tig0019834:12382-12401 None:intergenic 30.0%
TTTGCTAAAGCTAGTAGATA+TGG - tig0019834:12387-12406 None:intergenic 30.0%
ATCATCATAATCAGTCATCA+TGG + tig0019834:12424-12443 Msa1376880:CDS 30.0%
TCATCATAATCAGTCATCAT+GGG + tig0019834:12425-12444 Msa1376880:CDS 30.0%
AATAATGAACAAAGTCAAGG+TGG + tig0019834:12786-12805 Msa1376880:CDS 30.0%
!!! TTGGTCTGAACTTTTTTTTG+AGG + tig0019834:12977-12996 Msa1376880:CDS 30.0%
TAAGGTGGACCAATTATTTA+AGG + tig0019834:11713-11732 Msa1376880:CDS 30.0%
! AGGAAAATTTTCTCAAGAAG+AGG + tig0019834:11750-11769 Msa1376880:CDS 30.0%
! GAAGAAAAAGTTGATTCAGA+TGG + tig0019834:12311-12330 Msa1376880:CDS 30.0%
TAAAGCTAGTAGATATGGTA+TGG - tig0019834:12382-12401 None:intergenic 30.0%
TTTGCTAAAGCTAGTAGATA+TGG - tig0019834:12387-12406 None:intergenic 30.0%
ATCATCATAATCAGTCATCA+TGG + tig0019834:12424-12443 Msa1376880:CDS 30.0%
TCATCATAATCAGTCATCAT+GGG + tig0019834:12425-12444 Msa1376880:CDS 30.0%
AATAATGAACAAAGTCAAGG+TGG + tig0019834:12786-12805 Msa1376880:CDS 30.0%
!!! TTGGTCTGAACTTTTTTTTG+AGG + tig0019834:12977-12996 Msa1376880:CDS 30.0%
!!! ACTAGCTTTTGATCTTCTTC+AGG - tig0019834:11499-11518 None:intergenic 35.0%
! TATACAAACCAGCTAGCTTA+GGG - tig0019834:11564-11583 None:intergenic 35.0%
! ATATACAAACCAGCTAGCTT+AGG - tig0019834:11565-11584 None:intergenic 35.0%
TTTGCAGGTCTTAATAGATG+TGG + tig0019834:11676-11695 Msa1376880:intron 35.0%
ATAGATGTGGAAAGAGTTGT+AGG + tig0019834:11689-11708 Msa1376880:CDS 35.0%
TTAAGGCCTGATATTAAGAG+AGG + tig0019834:11730-11749 Msa1376880:CDS 35.0%
CTTCATCTTCATTCAATCCT+TGG + tig0019834:11784-11803 Msa1376880:CDS 35.0%
AAAGTACGTACTTGTTTCCA+AGG - tig0019834:11804-11823 None:intergenic 35.0%
CTATATGCACCTTTAACAGA+TGG + tig0019834:12220-12239 Msa1376880:intron 35.0%
AATTGCTGACCATCTGTTAA+AGG - tig0019834:12232-12251 None:intergenic 35.0%
ATCTCATTATCTGTTCTTCC+AGG - tig0019834:12267-12286 None:intergenic 35.0%
AGCAAACATGACAGAACTTA+TGG + tig0019834:12401-12420 Msa1376880:CDS 35.0%
! TGTTTGTGATCATGGCATTT+TGG - tig0019834:12578-12597 None:intergenic 35.0%
AAATGCCATGATCACAAACA+TGG + tig0019834:12578-12597 Msa1376880:CDS 35.0%
TTGTTCCATGTTTGTGATCA+TGG - tig0019834:12586-12605 None:intergenic 35.0%
!! AATAATGGACTGTTCACAAC+TGG + tig0019834:12656-12675 Msa1376880:CDS 35.0%
TTGTTGTGGGTCTAAAAAGT+GGG - tig0019834:12736-12755 None:intergenic 35.0%
!! TGAAAGAGACTTGTTGTTGT+GGG - tig0019834:12749-12768 None:intergenic 35.0%
TTCATCAACTGTTGCAAAGT+TGG - tig0019834:12820-12839 None:intergenic 35.0%
!! CAGTTGATGAAACATCATCA+TGG + tig0019834:12829-12848 Msa1376880:CDS 35.0%
GCATTTAGAGGAACAGATAT+TGG - tig0019834:12876-12895 None:intergenic 35.0%
ATCTGTTCCTCTAAATGCTA+TGG + tig0019834:12878-12897 Msa1376880:CDS 35.0%
TCTGTTCCTCTAAATGCTAT+GGG + tig0019834:12879-12898 Msa1376880:CDS 35.0%
AGTTCAGACCAATAAGATAC+TGG - tig0019834:12969-12988 None:intergenic 35.0%
!!! ACTAGCTTTTGATCTTCTTC+AGG - tig0019834:11499-11518 None:intergenic 35.0%
! TATACAAACCAGCTAGCTTA+GGG - tig0019834:11564-11583 None:intergenic 35.0%
! ATATACAAACCAGCTAGCTT+AGG - tig0019834:11565-11584 None:intergenic 35.0%
TTTGCAGGTCTTAATAGATG+TGG + tig0019834:11676-11695 Msa1376880:intron 35.0%
ATAGATGTGGAAAGAGTTGT+AGG + tig0019834:11689-11708 Msa1376880:CDS 35.0%
TTAAGGCCTGATATTAAGAG+AGG + tig0019834:11730-11749 Msa1376880:CDS 35.0%
CTTCATCTTCATTCAATCCT+TGG + tig0019834:11784-11803 Msa1376880:CDS 35.0%
AAAGTACGTACTTGTTTCCA+AGG - tig0019834:11804-11823 None:intergenic 35.0%
CTATATGCACCTTTAACAGA+TGG + tig0019834:12220-12239 Msa1376880:intron 35.0%
AATTGCTGACCATCTGTTAA+AGG - tig0019834:12232-12251 None:intergenic 35.0%
ATCTCATTATCTGTTCTTCC+AGG - tig0019834:12267-12286 None:intergenic 35.0%
AGCAAACATGACAGAACTTA+TGG + tig0019834:12401-12420 Msa1376880:CDS 35.0%
! TGTTTGTGATCATGGCATTT+TGG - tig0019834:12578-12597 None:intergenic 35.0%
AAATGCCATGATCACAAACA+TGG + tig0019834:12578-12597 Msa1376880:CDS 35.0%
TTGTTCCATGTTTGTGATCA+TGG - tig0019834:12586-12605 None:intergenic 35.0%
!! AATAATGGACTGTTCACAAC+TGG + tig0019834:12656-12675 Msa1376880:CDS 35.0%
TTGTTGTGGGTCTAAAAAGT+GGG - tig0019834:12736-12755 None:intergenic 35.0%
!! TGAAAGAGACTTGTTGTTGT+GGG - tig0019834:12749-12768 None:intergenic 35.0%
TTCATCAACTGTTGCAAAGT+TGG - tig0019834:12820-12839 None:intergenic 35.0%
!! CAGTTGATGAAACATCATCA+TGG + tig0019834:12829-12848 Msa1376880:CDS 35.0%
GCATTTAGAGGAACAGATAT+TGG - tig0019834:12876-12895 None:intergenic 35.0%
ATCTGTTCCTCTAAATGCTA+TGG + tig0019834:12878-12897 Msa1376880:CDS 35.0%
TCTGTTCCTCTAAATGCTAT+GGG + tig0019834:12879-12898 Msa1376880:CDS 35.0%
AGTTCAGACCAATAAGATAC+TGG - tig0019834:12969-12988 None:intergenic 35.0%
GTTGAACACATTCAGCAACA+TGG + tig0019834:11517-11536 Msa1376880:CDS 40.0%
!! GTTCTTGGTTGATGAGTCAT+TGG - tig0019834:12345-12364 None:intergenic 40.0%
GTGGAAACAAGATCAGTTCT+TGG - tig0019834:12360-12379 None:intergenic 40.0%
AGCTAGTAGATATGGTATGG+TGG - tig0019834:12379-12398 None:intergenic 40.0%
!! GATCATGGCATTTTGGTCAT+AGG - tig0019834:12571-12590 None:intergenic 40.0%
TGTTGTGGGTCTAAAAAGTG+GGG - tig0019834:12735-12754 None:intergenic 40.0%
GTTGTTGTGGGTCTAAAAAG+TGG - tig0019834:12737-12756 None:intergenic 40.0%
!! CTGAAAGAGACTTGTTGTTG+TGG - tig0019834:12750-12769 None:intergenic 40.0%
ACAGATATTGGAGCAGAAGA+TGG - tig0019834:12864-12883 None:intergenic 40.0%
CTGTTCCTCTAAATGCTATG+GGG + tig0019834:12880-12899 Msa1376880:CDS 40.0%
GAAATCCCCATAGCATTTAG+AGG - tig0019834:12888-12907 None:intergenic 40.0%
GACCAATAAGATACTGGAGA+GGG - tig0019834:12963-12982 None:intergenic 40.0%
AGACCAATAAGATACTGGAG+AGG - tig0019834:12964-12983 None:intergenic 40.0%
GTTGAACACATTCAGCAACA+TGG + tig0019834:11517-11536 Msa1376880:CDS 40.0%
!! GTTCTTGGTTGATGAGTCAT+TGG - tig0019834:12345-12364 None:intergenic 40.0%
GTGGAAACAAGATCAGTTCT+TGG - tig0019834:12360-12379 None:intergenic 40.0%
AGCTAGTAGATATGGTATGG+TGG - tig0019834:12379-12398 None:intergenic 40.0%
!! GATCATGGCATTTTGGTCAT+AGG - tig0019834:12571-12590 None:intergenic 40.0%
TGTTGTGGGTCTAAAAAGTG+GGG - tig0019834:12735-12754 None:intergenic 40.0%
GTTGTTGTGGGTCTAAAAAG+TGG - tig0019834:12737-12756 None:intergenic 40.0%
!! CTGAAAGAGACTTGTTGTTG+TGG - tig0019834:12750-12769 None:intergenic 40.0%
ACAGATATTGGAGCAGAAGA+TGG - tig0019834:12864-12883 None:intergenic 40.0%
CTGTTCCTCTAAATGCTATG+GGG + tig0019834:12880-12899 Msa1376880:CDS 40.0%
GAAATCCCCATAGCATTTAG+AGG - tig0019834:12888-12907 None:intergenic 40.0%
GACCAATAAGATACTGGAGA+GGG - tig0019834:12963-12982 None:intergenic 40.0%
AGACCAATAAGATACTGGAG+AGG - tig0019834:12964-12983 None:intergenic 40.0%
GATGAGAGTGGCCTAAAGAA+AGG + tig0019834:11463-11482 Msa1376880:CDS 45.0%
GAGTCCAAGGTCCTTTCTTT+AGG - tig0019834:11477-11496 None:intergenic 45.0%
TGATCTTCTTCAGGAGTCCA+AGG - tig0019834:11490-11509 None:intergenic 45.0%
GTGGAAAGAGTTGTAGGCTA+AGG + tig0019834:11695-11714 Msa1376880:CDS 45.0%
GAAAGAGTTGTAGGCTAAGG+TGG + tig0019834:11698-11717 Msa1376880:CDS 45.0%
TGTTCTTCCAGGTAGATGTG+TGG - tig0019834:12256-12275 None:intergenic 45.0%
AAAAGTGGGGTAGCACACTT+TGG - tig0019834:12722-12741 None:intergenic 45.0%
AATGCTATGGGGATTTCAGC+AGG + tig0019834:12891-12910 Msa1376880:CDS 45.0%
GACCCTCTCCAGTATCTTAT+TGG + tig0019834:12958-12977 Msa1376880:CDS 45.0%
GATGAGAGTGGCCTAAAGAA+AGG + tig0019834:11463-11482 Msa1376880:CDS 45.0%
GAGTCCAAGGTCCTTTCTTT+AGG - tig0019834:11477-11496 None:intergenic 45.0%
TGATCTTCTTCAGGAGTCCA+AGG - tig0019834:11490-11509 None:intergenic 45.0%
GTGGAAAGAGTTGTAGGCTA+AGG + tig0019834:11695-11714 Msa1376880:CDS 45.0%
GAAAGAGTTGTAGGCTAAGG+TGG + tig0019834:11698-11717 Msa1376880:CDS 45.0%
TGTTCTTCCAGGTAGATGTG+TGG - tig0019834:12256-12275 None:intergenic 45.0%
AAAAGTGGGGTAGCACACTT+TGG - tig0019834:12722-12741 None:intergenic 45.0%
AATGCTATGGGGATTTCAGC+AGG + tig0019834:12891-12910 Msa1376880:CDS 45.0%
GACCCTCTCCAGTATCTTAT+TGG + tig0019834:12958-12977 Msa1376880:CDS 45.0%
!! AAAAAAATAAATTAAAGTTA+TGG - tig0019834:11832-11851 None:intergenic 5.0%
!!! TTTTAAGATTTTTTTTTTTT+TGG - tig0019834:11915-11934 None:intergenic 5.0%
!! AAAAAAATAAATTAAAGTTA+TGG - tig0019834:11832-11851 None:intergenic 5.0%
!!! TTTTAAGATTTTTTTTTTTT+TGG - tig0019834:11915-11934 None:intergenic 5.0%
TCCCCATGTTGTGATGAGAG+TGG + tig0019834:11451-11470 Msa1376880:CDS 50.0%
GCCACTCTCATCACAACATG+GGG - tig0019834:11455-11474 None:intergenic 50.0%
GGCCACTCTCATCACAACAT+GGG - tig0019834:11456-11475 None:intergenic 50.0%
AGGCCACTCTCATCACAACA+TGG - tig0019834:11457-11476 None:intergenic 50.0%
GTGGCCTAAAGAAAGGACCT+TGG + tig0019834:11470-11489 Msa1376880:CDS 50.0%
CACATTCAGCAACATGGCCA+TGG + tig0019834:11523-11542 Msa1376880:CDS 50.0%
AGCAACATGGCCATGGAAGT+TGG + tig0019834:11530-11549 Msa1376880:CDS 50.0%
GCAATTGCCACACATCTACC+TGG + tig0019834:12246-12265 Msa1376880:CDS 50.0%
! AGCAGCTGCACTTCTAGCTA+TGG + tig0019834:12921-12940 Msa1376880:CDS 50.0%
! AGCTGCACTTCTAGCTATGG+AGG + tig0019834:12924-12943 Msa1376880:CDS 50.0%
! TGCACTTCTAGCTATGGAGG+AGG + tig0019834:12927-12946 Msa1376880:CDS 50.0%
! ACTTCTAGCTATGGAGGAGG+AGG + tig0019834:12930-12949 Msa1376880:CDS 50.0%
TCCCCATGTTGTGATGAGAG+TGG + tig0019834:11451-11470 Msa1376880:CDS 50.0%
GCCACTCTCATCACAACATG+GGG - tig0019834:11455-11474 None:intergenic 50.0%
GGCCACTCTCATCACAACAT+GGG - tig0019834:11456-11475 None:intergenic 50.0%
AGGCCACTCTCATCACAACA+TGG - tig0019834:11457-11476 None:intergenic 50.0%
GTGGCCTAAAGAAAGGACCT+TGG + tig0019834:11470-11489 Msa1376880:CDS 50.0%
CACATTCAGCAACATGGCCA+TGG + tig0019834:11523-11542 Msa1376880:CDS 50.0%
AGCAACATGGCCATGGAAGT+TGG + tig0019834:11530-11549 Msa1376880:CDS 50.0%
GCAATTGCCACACATCTACC+TGG + tig0019834:12246-12265 Msa1376880:CDS 50.0%
! AGCAGCTGCACTTCTAGCTA+TGG + tig0019834:12921-12940 Msa1376880:CDS 50.0%
! AGCTGCACTTCTAGCTATGG+AGG + tig0019834:12924-12943 Msa1376880:CDS 50.0%
! TGCACTTCTAGCTATGGAGG+AGG + tig0019834:12927-12946 Msa1376880:CDS 50.0%
! ACTTCTAGCTATGGAGGAGG+AGG + tig0019834:12930-12949 Msa1376880:CDS 50.0%
! GGAGTGCTCTCCAACTTCCA+TGG - tig0019834:11543-11562 None:intergenic 55.0%
! AGAGCACTCCCTAAGCTAGC+TGG + tig0019834:11553-11572 Msa1376880:CDS 55.0%
!! AGCACACTTTGGTGGTGGAG+TGG - tig0019834:12711-12730 None:intergenic 55.0%
AGTGGGGTAGCACACTTTGG+TGG - tig0019834:12719-12738 None:intergenic 55.0%
TCTAGCTATGGAGGAGGAGG+AGG + tig0019834:12933-12952 Msa1376880:CDS 55.0%
! GGAGTGCTCTCCAACTTCCA+TGG - tig0019834:11543-11562 None:intergenic 55.0%
! AGAGCACTCCCTAAGCTAGC+TGG + tig0019834:11553-11572 Msa1376880:CDS 55.0%
!! AGCACACTTTGGTGGTGGAG+TGG - tig0019834:12711-12730 None:intergenic 55.0%
AGTGGGGTAGCACACTTTGG+TGG - tig0019834:12719-12738 None:intergenic 55.0%
TCTAGCTATGGAGGAGGAGG+AGG + tig0019834:12933-12952 Msa1376880:CDS 55.0%
GGGGTAGCACACTTTGGTGG+TGG - tig0019834:12716-12735 None:intergenic 60.0%
AGCTATGGAGGAGGAGGAGG+AGG + tig0019834:12936-12955 Msa1376880:CDS 60.0%
GGGGTAGCACACTTTGGTGG+TGG - tig0019834:12716-12735 None:intergenic 60.0%
AGCTATGGAGGAGGAGGAGG+AGG + tig0019834:12936-12955 Msa1376880:CDS 60.0%
Chromosome Type Strat End Strand Name
tig0019834 gene 11442 13025 11442 ID=Msa1376880;Name=Msa1376880
tig0019834 mRNA 11442 13025 11442 ID=Msa1376880-mRNA-1;Parent=Msa1376880;Name=Msa1376880-mRNA-1;_AED=0.07;_eAED=0.08;_QI=0|0|0|1|1|1|3|0|349
tig0019834 exon 11442 11574 11442 ID=Msa1376880-mRNA-1:exon:5371;Parent=Msa1376880-mRNA-1
tig0019834 exon 11683 11812 11683 ID=Msa1376880-mRNA-1:exon:5372;Parent=Msa1376880-mRNA-1
tig0019834 exon 12239 13025 12239 ID=Msa1376880-mRNA-1:exon:5373;Parent=Msa1376880-mRNA-1
tig0019834 CDS 11442 11574 11442 ID=Msa1376880-mRNA-1:cds;Parent=Msa1376880-mRNA-1
tig0019834 CDS 11683 11812 11683 ID=Msa1376880-mRNA-1:cds;Parent=Msa1376880-mRNA-1
tig0019834 CDS 12239 13025 12239 ID=Msa1376880-mRNA-1:cds;Parent=Msa1376880-mRNA-1
Gene Sequence

>Msa1376880

ATGGGAAGGTCCCCATGTTGTGATGAGAGTGGCCTAAAGAAAGGACCTTGGACTCCTGAAGAAGATCAAAAGCTAGTTGAACACATTCAGCAACATGGCCATGGAAGTTGGAGAGCACTCCCTAAGCTAGCTGGTCTTAATAGATGTGGAAAGAGTTGTAGGCTAAGGTGGACCAATTATTTAAGGCCTGATATTAAGAGAGGAAAATTTTCTCAAGAAGAGGAGCAAACAATTCTTCATCTTCATTCAATCCTTGGAAACAAATGGTCAGCAATTGCCACACATCTACCTGGAAGAACAGATAATGAGATAAAGAATTTCTGGAACACTCATTTGAAGAAAAAGTTGATTCAGATGGGTTTTGATCCAATGACTCATCAACCAAGAACTGATCTTGTTTCCACCATACCATATCTACTAGCTTTAGCAAACATGACAGAACTTATGGATCATCATAATCAGTCATCATGGGATGATCAACAACATGCTGCAATGAGTAGTTTACAAGCAGAAGCAGTTCATCTTGCAAAGTTTCAATGCCTTCAATATTTACTCCAATCTTCAAATTCTTCTATAAACATTAATAATAATTCCTATGACCAAAATGCCATGATCACAAACATGGAACAACAACAACCCTTAAGTTTATTAAACACAATCTCTAATGTGAAAGAGAACATAATAATGGACTGTTCACAACTGGATAGTACTCATGCAGTCTCATTTTCTCAACCACTCCACCACCAAAGTGTGCTACCCCACTTTTTAGACCCACAACAACAAGTCTCTTTCAGTTCACAATCATGTTTGAATAATGAACAAAGTCAAGGTGGTACTATTACCAACTTTGCAACAGTTGATGAAACATCATCATGGATTAATGTTCCATCTTCTGCTCCAATATCTGTTCCTCTAAATGCTATGGGGATTTCAGCAGGAGATGCAAGCAGCTGCACTTCTAGCTATGGAGGAGGAGGAGGAGGACCCTCTCCAGTATCTTATTGGTCTGAACTTTTTTTTGAGGACCCCATTATGCATGATTTATCTTAA
Protein sequence

>Msa1376880

MGRSPCCDESGLKKGPWTPEEDQKLVEHIQQHGHGSWRALPKLAGLNRCGKSCRLRWTNYLRPDIKRGKFSQEEEQTILHLHSILGNKWSAIATHLPGRTDNEIKNFWNTHLKKKLIQMGFDPMTHQPRTDLVSTIPYLLALANMTELMDHHNQSSWDDQQHAAMSSLQAEAVHLAKFQCLQYLLQSSNSSININNNSYDQNAMITNMEQQQPLSLLNTISNVKENIIMDCSQLDSTHAVSFSQPLHHQSVLPHFLDPQQQVSFSSQSCLNNEQSQGGTITNFATVDETSSWINVPSSAPISVPLNAMGISAGDASSCTSSYGGGGGGPSPVSYWSELFFEDPIMHDLS*