AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1462610

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1462610 MtrunA17_Chr1g0152011 95.894 341 13 1 1 340 1 341 0.0 682
Msa1462610 MtrunA17_Chr3g0135311 56.725 342 109 12 1 329 1 316 5.24e-115 337
Msa1462610 MtrunA17_Chr5g0400821 79.042 167 30 2 1 167 1 162 2.34e-90 273
Msa1462610 MtrunA17_Chr4g0054391 84.828 145 22 0 1 145 1 145 1.93e-80 247
Msa1462610 MtrunA17_Chr4g0072751 95.495 111 5 0 1 111 1 111 1.02e-75 236
Msa1462610 MtrunA17_Chr4g0028311 84.874 119 18 0 1 119 1 119 2.94e-74 232
Msa1462610 MtrunA17_Chr7g0264641 81.356 118 22 0 1 118 1 118 2.13e-72 225
Msa1462610 MtrunA17_Chr2g0327351 88.288 111 13 0 1 111 1 111 1.22e-71 225
Msa1462610 MtrunA17_Chr1g0151941 77.966 118 26 0 1 118 1 118 8.23e-68 213
Msa1462610 MtrunA17_Chr6g0487491 55.135 185 61 3 1 177 1 171 1.80e-61 197
Msa1462610 MtrunA17_Chr6g0452271 55.195 154 63 2 1 149 1 153 6.29e-55 182
Msa1462610 MtrunA17_Chr3g0103281 68.067 119 37 1 1 119 1 118 1.03e-53 179
Msa1462610 MtrunA17_Chr3g0115821 63.559 118 42 1 1 118 1 117 4.16e-51 173
Msa1462610 MtrunA17_Chr1g0167691 49.080 163 82 1 1 163 1 162 7.84e-51 169
Msa1462610 MtrunA17_Chr6g0453471 64.103 117 41 1 1 117 1 116 1.65e-50 172
Msa1462610 MtrunA17_Chr4g0039971 62.712 118 43 1 1 118 2 118 5.01e-50 170
Msa1462610 MtrunA17_Chr7g0217741 64.103 117 41 1 1 117 1 116 5.46e-50 169
Msa1462610 MtrunA17_Chr4g0037141 60.833 120 46 1 1 120 1 119 6.82e-50 168
Msa1462610 MtrunA17_Chr7g0217221 64.957 117 40 1 1 117 1 116 8.17e-50 167
Msa1462610 MtrunA17_Chr1g0187761 52.941 153 66 2 1 153 1 147 1.01e-49 167
Msa1462610 MtrunA17_Chr5g0410961 62.712 118 43 1 1 118 1 117 2.06e-49 168
Msa1462610 MtrunA17_Chr3g0131121 49.686 159 77 2 1 159 1 156 2.38e-49 167
Msa1462610 MtrunA17_Chr4g0042671 64.957 117 40 1 1 117 1 116 3.16e-49 169
Msa1462610 MtrunA17_Chr1g0203411 61.538 117 44 1 1 117 1 116 6.62e-49 166
Msa1462610 MtrunA17_Chr8g0346561 60.684 117 45 1 1 117 1 116 7.48e-49 166
Msa1462610 MtrunA17_Chr1g0167661 54.110 146 66 1 1 146 1 145 8.08e-49 164
Msa1462610 MtrunA17_Chr2g0323411 62.712 118 43 1 1 118 1 117 2.76e-48 165
Msa1462610 MtrunA17_Chr7g0275911 57.480 127 48 2 1 127 1 121 2.77e-48 163
Msa1462610 MtrunA17_Chr2g0281071 62.185 119 43 2 1 118 1 118 3.39e-48 165
Msa1462610 MtrunA17_Chr4g0048511 62.185 119 43 2 1 118 1 118 3.71e-48 166
Msa1462610 MtrunA17_Chr4g0060721 60.684 117 45 1 1 117 2 117 1.28e-47 163
Msa1462610 MtrunA17_Chr1g0193371 62.393 117 43 1 1 117 1 116 4.31e-47 163
Msa1462610 MtrunA17_Chr8g0385321 60.000 120 47 1 1 120 1 119 7.56e-47 161
Msa1462610 MtrunA17_Chr7g0261281 54.545 132 59 1 1 132 1 131 9.01e-47 159
Msa1462610 MtrunA17_Chr4g0058631 61.017 118 45 1 1 118 1 117 1.38e-46 161
Msa1462610 MtrunA17_Chr7g0270891 46.591 176 81 2 1 164 1 175 2.52e-46 161
Msa1462610 MtrunA17_Chr7g0274581 58.120 117 48 1 1 117 1 116 2.72e-46 156
Msa1462610 MtrunA17_Chr7g0254411 60.684 117 45 1 1 117 1 116 2.98e-46 160
Msa1462610 MtrunA17_Chr1g0193801 60.833 120 46 1 1 120 1 119 3.47e-46 161
Msa1462610 MtrunA17_Chr4g0070611 55.725 131 52 2 1 131 1 125 3.48e-46 159
Msa1462610 MtrunA17_Chr3g0092401 60.684 117 45 1 1 117 2 117 4.02e-46 159
Msa1462610 MtrunA17_Chr8g0349261 57.983 119 49 1 1 118 1 119 6.86e-46 158
Msa1462610 MtrunA17_Chr2g0323351 40.394 203 114 3 1 199 1 200 7.29e-46 156
Msa1462610 MtrunA17_Chr4g0070641 55.725 131 52 2 1 131 1 125 9.17e-46 153
Msa1462610 MtrunA17_Chr7g0228891 53.642 151 60 5 1 144 1 148 1.30e-45 156
Msa1462610 MtrunA17_Chr5g0395281 59.322 118 47 1 1 118 1 117 1.58e-45 157
Msa1462610 MtrunA17_Chr5g0435101 56.034 116 50 1 3 118 2 116 2.20e-45 154
Msa1462610 MtrunA17_Chr6g0453211 63.063 111 40 1 1 111 1 110 2.47e-45 157
Msa1462610 MtrunA17_Chr4g0057031 59.322 118 47 1 1 118 1 117 2.71e-45 155
Msa1462610 MtrunA17_Chr3g0117091 59.322 118 47 1 1 118 1 117 7.19e-45 157
Msa1462610 MtrunA17_Chr4g0068061 57.265 117 49 1 1 117 1 116 7.90e-45 156
Msa1462610 MtrunA17_Chr2g0311221 60.909 110 42 1 2 111 4 112 1.25e-44 155
Msa1462610 MtrunA17_Chr4g0022931 56.780 118 49 2 1 117 1 117 1.98e-44 153
Msa1462610 MtrunA17_Chr8g0387421 57.265 117 49 1 1 117 1 116 2.93e-44 154
Msa1462610 MtrunA17_Chr3g0110351 59.829 117 46 1 1 117 1 116 4.97e-44 153
Msa1462610 MtrunA17_Chr1g0211161 36.863 255 120 7 3 256 4 218 6.18e-44 150
Msa1462610 MtrunA17_Chr4g0022891 51.825 137 65 1 1 137 1 136 7.77e-44 151
Msa1462610 MtrunA17_Chr7g0271241 63.636 110 39 1 1 110 1 109 1.01e-43 154
Msa1462610 MtrunA17_Chr5g0434571 59.829 117 46 1 1 117 37 152 1.43e-43 153
Msa1462610 MtrunA17_Chr2g0330041 57.143 119 50 1 1 119 1 118 1.56e-43 154
Msa1462610 MtrunA17_Chr4g0022901 55.462 119 51 2 1 118 1 118 2.66e-43 150
Msa1462610 MtrunA17_Chr3g0121241 56.140 114 49 1 5 118 35 147 3.40e-43 151
Msa1462610 MtrunA17_Chr8g0342541 56.780 118 50 1 1 118 1 117 6.85e-43 151
Msa1462610 MtrunA17_Chr8g0342481 54.622 119 54 0 1 119 1 119 2.31e-42 151
Msa1462610 MtrunA17_Chr8g0342521 56.303 119 51 1 1 119 1 118 2.98e-42 150
Msa1462610 MtrunA17_Chr5g0397231 58.559 111 45 1 1 111 1 110 3.34e-42 149
Msa1462610 MtrunA17_Chr2g0309911 55.652 115 50 1 6 120 5 118 1.09e-41 147
Msa1462610 MtrunA17_Chr4g0022911 52.941 119 54 2 1 118 1 118 1.48e-41 146
Msa1462610 MtrunA17_Chr4g0044421 55.462 119 51 2 3 120 2 119 3.72e-41 142
Msa1462610 MtrunA17_Chr1g0194951 54.701 117 52 1 1 117 1 116 4.60e-41 147
Msa1462610 MtrunA17_Chr4g0022881 56.522 115 49 1 1 115 1 114 2.03e-40 142
Msa1462610 MtrunA17_Chr7g0269831 58.120 117 48 1 1 117 1 116 3.43e-39 142
Msa1462610 MtrunA17_Chr3g0080861 40.278 216 89 7 12 194 37 245 6.80e-39 144
Msa1462610 MtrunA17_Chr3g0099131 58.879 107 43 1 10 116 39 144 6.82e-39 144
Msa1462610 MtrunA17_Chr5g0417821 57.009 107 45 1 12 118 7 112 8.23e-39 139
Msa1462610 MtrunA17_Chr1g0203441 51.938 129 60 2 1 128 1 128 4.70e-38 137
Msa1462610 MtrunA17_Chr2g0328771 56.604 106 45 1 12 117 20 124 1.03e-37 137
Msa1462610 MtrunA17_Chr8g0354661 57.143 105 44 1 12 116 37 140 1.36e-37 141
Msa1462610 MtrunA17_Chr3g0088461 56.364 110 47 1 8 117 18 126 2.44e-37 137
Msa1462610 MtrunA17_Chr6g0470971 56.637 113 48 1 4 116 6 117 2.94e-37 135
Msa1462610 MtrunA17_Chr4g0032401 40.331 181 81 4 12 184 17 178 3.73e-37 136
Msa1462610 MtrunA17_Chr4g0055981 41.667 168 87 3 9 166 52 218 4.59e-37 133
Msa1462610 MtrunA17_Chr5g0434931 54.128 109 49 1 12 120 35 142 8.46e-37 134
Msa1462610 MtrunA17_Chr8g0343831 55.556 117 47 2 1 117 1 112 1.08e-36 132
Msa1462610 MtrunA17_Chr7g0228231 40.722 194 108 4 11 203 13 200 2.03e-36 130
Msa1462610 MtrunA17_Chr5g0434911 51.754 114 54 1 7 120 16 128 3.85e-36 132
Msa1462610 MtrunA17_Chr1g0186061 52.500 120 54 2 13 132 21 137 5.98e-36 130
Msa1462610 MtrunA17_Chr1g0168661 53.333 120 53 2 13 132 22 138 6.39e-36 130
Msa1462610 MtrunA17_Chr7g0240821 46.497 157 70 4 16 159 5 160 1.24e-35 129
Msa1462610 MtrunA17_Chr7g0220341 48.837 129 63 2 12 138 25 152 1.25e-35 130
Msa1462610 MtrunA17_Chr6g0450101 52.101 119 54 2 1 117 1 118 1.43e-35 128
Msa1462610 MtrunA17_Chr1g0194301 55.046 109 48 1 8 116 29 136 2.58e-35 129
Msa1462610 MtrunA17_Chr2g0322521 57.407 108 45 1 9 116 26 132 4.19e-35 132
Msa1462610 MtrunA17_Chr5g0440781 55.140 107 46 2 10 115 10 115 5.70e-35 126
Msa1462610 MtrunA17_Chr7g0228991 53.211 109 50 1 12 120 29 136 1.58e-34 127
Msa1462610 MtrunA17_Chr1g0180391 35.683 227 108 6 10 221 17 220 3.55e-34 125
Msa1462610 MtrunA17_Chr1g0209661 54.286 105 47 1 12 116 27 130 4.11e-34 127
Msa1462610 MtrunA17_Chr5g0440761 55.140 107 46 2 10 115 10 115 4.21e-34 126
Msa1462610 MtrunA17_Chr5g0441141 55.140 107 46 2 10 115 10 115 4.39e-34 126
Msa1462610 MtrunA17_Chr1g0192411 52.294 109 51 1 8 116 8 115 1.28e-33 128
Msa1462610 MtrunA17_Chr1g0194291 54.128 109 49 1 8 116 17 124 1.47e-33 124
Msa1462610 MtrunA17_Chr8g0360111 55.882 102 44 1 12 113 25 125 6.16e-33 123
Msa1462610 MtrunA17_Chr5g0434831 51.402 107 51 1 12 118 7 112 9.50e-33 120
Msa1462610 MtrunA17_Chr5g0434841 50.459 109 53 1 12 120 20 127 1.35e-32 123
Msa1462610 MtrunA17_Chr1g0154031 51.429 105 50 1 12 116 76 179 1.58e-32 125
Msa1462610 MtrunA17_Chr5g0441131 53.271 107 48 2 10 115 7 112 3.37e-32 119
Msa1462610 MtrunA17_Chr4g0042611 58.427 89 36 1 1 89 1 88 3.72e-32 115
Msa1462610 MtrunA17_Chr4g0068921 53.704 108 49 1 8 115 20 126 1.97e-31 117
Msa1462610 MtrunA17_Chr2g0293911 53.704 108 49 1 8 115 20 126 2.09e-30 117
Msa1462610 MtrunA17_Chr2g0327821 49.550 111 55 1 12 122 6 115 3.85e-30 115
Msa1462610 MtrunA17_Chr3g0099141 56.818 88 37 1 8 95 36 122 1.96e-29 110
Msa1462610 MtrunA17_Chr2g0294811 53.763 93 42 1 1 93 1 92 4.44e-29 108
Msa1462610 MtrunA17_Chr7g0247131 63.889 72 26 0 46 117 11 82 8.45e-29 112
Msa1462610 MtrunA17_Chr4g0008551 41.549 142 80 3 14 154 38 177 1.65e-28 113
Msa1462610 MtrunA17_Chr8g0334881 48.624 109 54 2 8 115 6 113 1.86e-28 112
Msa1462610 MtrunA17_Chr4g0053431 46.721 122 60 3 14 132 5 124 5.35e-28 110
Msa1462610 MtrunA17_Chr5g0401731 50.485 103 49 2 14 116 15 115 8.33e-28 110
Msa1462610 MtrunA17_Chr8g0342461 53.333 90 42 0 1 90 1 90 9.87e-28 105
Msa1462610 MtrunA17_Chr8g0342471 53.333 90 42 0 1 90 1 90 2.61e-27 104
Msa1462610 MtrunA17_Chr8g0342511 55.172 87 38 1 1 87 1 86 3.02e-27 103
Msa1462610 MtrunA17_Chr4g0013361 47.706 109 55 2 8 115 6 113 3.26e-27 108
Msa1462610 MtrunA17_Chr4g0030881 46.847 111 51 2 13 116 8 117 3.38e-27 107
Msa1462610 MtrunA17_Chr3g0133601 48.624 109 54 2 8 116 31 137 4.41e-27 106
Msa1462610 MtrunA17_Chr8g0342531 53.333 90 41 1 1 90 1 89 5.44e-27 104
Msa1462610 MtrunA17_Chr6g0454921 49.515 103 50 2 14 116 15 115 2.07e-26 104
Msa1462610 MtrunA17_Chr5g0395221 51.685 89 42 1 1 89 1 88 1.22e-25 98.6
Msa1462610 MtrunA17_Chr2g0323321 48.387 93 46 2 1 93 1 91 2.18e-25 98.6
Msa1462610 MtrunA17_Chr5g0434901 61.429 70 27 0 45 114 5 74 9.58e-25 97.1
Msa1462610 MtrunA17_Chr3g0093811 55.422 83 34 1 38 117 4 86 1.22e-23 98.2
Msa1462610 MtrunA17_Chr5g0429661 40.000 120 68 3 14 133 122 237 1.63e-23 99.8
Msa1462610 MtrunA17_Chr7g0229131 46.512 86 46 0 46 131 5 90 1.87e-22 92.4
Msa1462610 MtrunA17_Chr4g0042501 33.533 167 90 5 14 180 105 250 2.53e-22 97.1
Msa1462610 MtrunA17_Chr7g0229101 57.971 69 29 0 46 114 5 73 2.96e-22 93.2
Msa1462610 MtrunA17_Chr6g0480581 41.176 102 58 2 14 115 4 103 4.88e-22 93.2
Msa1462610 MtrunA17_Chr3g0117511 37.594 133 74 3 9 141 178 301 1.29e-21 95.1
Msa1462610 MtrunA17_Chr4g0058991 36.842 133 75 3 9 141 204 327 1.35e-21 95.1
Msa1462610 MtrunA17_Chr5g0425591 50.575 87 41 2 11 96 8 93 2.21e-21 87.4
Msa1462610 MtrunA17_Chr5g0417621 36.641 131 77 3 14 144 134 258 3.38e-21 94.0
Msa1462610 MtrunA17_Chr6g0460661 41.667 108 58 3 14 118 16 121 3.92e-21 88.6
Msa1462610 MtrunA17_Chr5g0437321 45.000 100 53 2 14 113 19 116 1.70e-20 90.1
Msa1462610 MtrunA17_Chr7g0238651 33.696 184 98 7 17 189 10 180 1.88e-19 88.2
Msa1462610 MtrunA17_Chr3g0125801 40.367 109 63 2 8 116 10 116 2.37e-19 87.0
Msa1462610 MtrunA17_Chr6g0453751 45.161 93 43 3 12 96 20 112 4.29e-19 82.4
Msa1462610 MtrunA17_Chr7g0238631 44.860 107 51 3 14 117 113 214 4.71e-19 88.2
Msa1462610 MtrunA17_Chr6g0460671 41.748 103 58 2 14 116 99 199 7.91e-19 86.3
Msa1462610 MtrunA17_Chr3g0139671 40.385 104 60 2 14 117 85 186 2.29e-18 86.3
Msa1462610 MtrunA17_Chr7g0254261 39.496 119 65 3 14 132 89 200 3.18e-18 84.7
Msa1462610 MtrunA17_Chr7g0228531 36.290 124 67 4 11 134 217 328 4.85e-18 84.7
Msa1462610 MtrunA17_Chr7g0228401 31.944 144 71 4 11 130 252 392 1.46e-17 83.6
Msa1462610 MtrunA17_Chr1g0157731 37.903 124 72 3 14 134 91 212 1.75e-17 84.0
Msa1462610 MtrunA17_Chr1g0157731 35.644 101 62 3 14 113 39 137 6.16e-11 63.9
Msa1462610 MtrunA17_Chr5g0416341 34.641 153 88 4 17 169 29 169 4.61e-17 82.0
Msa1462610 MtrunA17_Chr5g0397841 42.000 100 56 2 11 110 107 204 9.07e-17 80.9
Msa1462610 MtrunA17_Chr8g0362231 41.000 100 57 2 17 116 25 122 4.10e-16 79.0
Msa1462610 MtrunA17_Chr1g0177901 44.872 78 43 0 34 111 12 89 1.51e-15 74.7
Msa1462610 MtrunA17_Chr7g0233061 35.115 131 76 6 10 140 176 297 3.30e-15 75.9
Msa1462610 MtrunA17_Chr1g0193901 55.932 59 24 2 12 69 11 68 1.46e-14 69.3
Msa1462610 MtrunA17_Chr1g0193891 55.932 59 24 2 12 69 11 68 1.46e-14 69.3
Msa1462610 MtrunA17_Chr1g0193871 55.932 59 24 2 12 69 11 68 1.46e-14 69.3
Msa1462610 MtrunA17_Chr1g0193881 55.932 59 24 2 12 69 11 68 1.46e-14 69.3
Msa1462610 MtrunA17_Chr7g0228481 35.484 124 68 5 11 134 217 328 1.80e-14 73.9
Msa1462610 MtrunA17_Chr7g0247141 53.191 47 22 0 1 47 1 47 1.52e-13 64.7
Msa1462610 MtrunA17_Chr5g0434871 54.545 44 20 0 75 118 2 45 1.58e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1462610 AT3G49690.1 62.621 206 65 3 1 205 1 195 7.71e-84 256
Msa1462610 AT5G65790.1 73.054 167 42 2 1 165 1 166 2.48e-82 254
Msa1462610 AT5G57620.1 86.047 129 18 0 1 129 1 129 4.32e-80 248
Msa1462610 AT4G37780.1 84.375 128 20 0 1 128 1 128 3.50e-77 239
Msa1462610 AT2G36890.1 83.193 119 20 0 1 119 1 119 2.01e-71 224
Msa1462610 AT2G36890.2 83.193 119 20 0 1 119 42 160 2.27e-71 225
Msa1462610 AT5G23000.1 79.661 118 24 0 1 118 1 118 1.00e-67 216
Msa1462610 AT5G56110.1 69.748 119 35 1 1 119 1 118 1.15e-55 184
Msa1462610 AT3G01140.2 64.407 118 41 1 1 118 1 117 7.52e-52 175
Msa1462610 AT5G15310.4 63.559 118 42 1 1 118 1 117 2.80e-51 171
Msa1462610 AT5G61420.2 43.810 210 106 2 1 210 1 198 4.82e-51 174
Msa1462610 AT5G15310.1 63.559 118 42 1 1 118 1 117 7.52e-51 172
Msa1462610 AT5G15310.2 63.559 118 42 1 1 118 1 117 9.42e-51 171
Msa1462610 AT1G22640.1 48.780 164 79 2 1 164 1 159 5.41e-50 167
Msa1462610 AT3G02940.2 61.017 118 45 1 1 118 1 117 8.42e-50 169
Msa1462610 AT5G16770.4 62.712 118 43 1 1 118 1 117 8.47e-50 169
Msa1462610 AT5G16770.3 62.712 118 43 1 1 118 1 117 8.47e-50 169
Msa1462610 AT3G02940.1 61.017 118 45 1 1 118 1 117 1.51e-49 168
Msa1462610 AT3G02940.3 61.017 118 45 1 1 118 1 117 1.51e-49 168
Msa1462610 AT2G16720.1 60.833 120 46 1 1 120 1 119 1.62e-49 167
Msa1462610 AT5G16770.1 62.712 118 43 1 1 118 1 117 1.92e-49 169
Msa1462610 AT5G16770.2 62.712 118 43 1 1 118 1 117 1.92e-49 169
Msa1462610 AT3G23250.1 62.393 117 43 1 1 117 1 116 2.03e-49 167
Msa1462610 AT4G38620.1 55.556 135 53 2 1 129 1 134 2.15e-49 167
Msa1462610 AT3G47600.1 54.194 155 65 2 1 155 1 149 2.28e-49 168
Msa1462610 AT4G21440.1 61.864 118 44 1 1 118 1 117 2.60e-49 169
Msa1462610 AT3G28470.1 54.037 161 64 3 1 152 1 160 2.75e-49 167
Msa1462610 AT4G28110.1 62.712 118 43 1 1 118 1 117 2.77e-49 167
Msa1462610 AT4G05100.1 63.866 119 41 2 1 118 1 118 3.22e-49 167
Msa1462610 AT4G09460.1 61.017 118 45 1 1 118 1 117 6.39e-49 164
Msa1462610 AT1G35515.1 59.167 120 48 1 1 120 1 119 1.13e-48 163
Msa1462610 AT4G34990.1 61.667 120 45 1 1 120 1 119 1.26e-48 164
Msa1462610 AT3G01140.1 62.712 118 43 1 1 118 44 160 1.26e-48 168
Msa1462610 AT5G62470.2 63.248 117 42 1 1 117 1 116 1.82e-48 166
Msa1462610 AT1G08810.1 49.689 161 79 2 1 161 1 159 2.17e-48 164
Msa1462610 AT1G79180.1 63.793 116 41 1 2 117 4 118 2.93e-48 164
Msa1462610 AT2G31180.1 50.909 165 73 3 1 158 1 164 3.68e-48 162
Msa1462610 AT1G74650.1 62.712 118 43 1 1 118 1 117 5.50e-48 164
Msa1462610 AT3G61250.1 60.169 118 46 1 1 118 1 117 6.83e-48 163
Msa1462610 AT5G07690.1 62.500 120 44 1 1 120 1 119 9.95e-48 164
Msa1462610 AT1G16490.1 51.899 158 72 2 2 159 4 157 1.28e-47 162
Msa1462610 AT3G28910.1 63.248 117 42 1 1 117 1 116 1.76e-47 163
Msa1462610 AT5G65230.1 61.017 118 45 1 1 118 1 117 1.99e-47 162
Msa1462610 AT1G34670.1 61.864 118 44 1 1 118 1 117 2.28e-47 164
Msa1462610 AT4G01680.3 62.393 117 43 1 1 117 1 116 2.74e-47 160
Msa1462610 AT5G60890.1 61.538 117 44 1 1 117 1 116 2.75e-47 162
Msa1462610 AT4G17785.2 61.345 119 44 2 1 118 1 118 6.81e-47 162
Msa1462610 AT1G06180.1 59.375 128 49 2 1 128 1 125 7.26e-47 159
Msa1462610 AT3G62610.1 57.724 123 51 1 1 123 1 122 9.10e-47 162
Msa1462610 AT5G10280.1 59.322 118 47 1 1 118 1 117 1.04e-46 161
Msa1462610 AT4G17785.1 61.345 119 44 2 1 118 1 118 1.04e-46 162
Msa1462610 AT5G26660.1 60.000 120 47 1 1 120 1 119 1.14e-46 162
Msa1462610 AT4G01680.1 62.393 117 43 1 1 117 1 116 1.30e-46 161
Msa1462610 AT1G57560.1 60.833 120 46 1 1 120 1 119 1.38e-46 160
Msa1462610 AT1G56160.1 60.345 116 45 1 2 117 4 118 1.90e-46 159
Msa1462610 AT5G62470.1 63.248 117 41 2 1 117 1 115 2.12e-46 161
Msa1462610 AT1G57560.2 60.833 120 46 1 1 120 1 119 2.39e-46 159
Msa1462610 AT4G12350.1 61.864 118 44 1 1 118 1 117 3.17e-46 159
Msa1462610 AT1G18570.1 61.157 121 45 2 1 120 1 120 5.85e-46 160
Msa1462610 AT4G22680.1 60.169 118 46 1 1 118 1 117 3.32e-45 155
Msa1462610 AT1G09540.1 60.684 117 45 1 1 117 1 116 4.13e-45 158
Msa1462610 AT1G63910.1 55.469 128 56 1 1 128 1 127 5.07e-45 158
Msa1462610 AT3G13540.1 57.391 115 48 1 4 118 15 128 9.48e-45 154
Msa1462610 AT3G12820.1 58.475 118 48 1 3 120 5 121 2.11e-44 152
Msa1462610 AT5G62320.1 51.429 140 56 2 2 129 3 142 2.44e-44 152
Msa1462610 AT5G07700.1 59.322 118 47 1 1 118 1 117 2.72e-44 155
Msa1462610 AT5G07700.2 59.322 118 47 1 1 118 1 117 2.72e-44 155
Msa1462610 AT2G47460.1 56.098 123 53 1 1 123 1 122 3.16e-44 156
Msa1462610 AT5G54230.1 60.169 118 46 1 1 118 1 117 6.41e-44 154
Msa1462610 AT5G16600.1 52.778 144 55 2 1 132 1 143 1.49e-43 153
Msa1462610 AT5G49330.1 57.265 117 49 1 1 117 1 116 2.01e-43 153
Msa1462610 AT4G01680.2 56.589 129 43 2 1 117 1 128 2.15e-43 153
Msa1462610 AT1G74080.1 56.667 120 51 1 1 120 1 119 2.44e-43 152
Msa1462610 AT3G13890.2 56.303 119 51 1 1 119 1 118 3.21e-43 153
Msa1462610 AT1G66230.1 58.974 117 47 1 1 117 1 116 7.36e-43 150
Msa1462610 AT5G14750.1 47.799 159 75 2 13 171 17 167 1.21e-42 147
Msa1462610 AT5G14340.1 55.556 117 51 1 1 117 13 128 5.75e-42 147
Msa1462610 AT3G12720.1 56.522 115 49 1 6 120 16 129 6.03e-42 148
Msa1462610 AT1G79180.2 49.664 149 41 2 2 117 4 151 1.51e-41 147
Msa1462610 AT3G13890.1 52.344 128 51 2 1 119 1 127 3.63e-40 145
Msa1462610 AT5G52600.1 59.259 108 43 1 9 116 9 115 9.96e-40 139
Msa1462610 AT3G27920.1 56.881 109 46 1 13 121 15 122 1.54e-39 139
Msa1462610 AT1G74430.1 54.167 120 54 1 1 120 1 119 1.91e-39 140
Msa1462610 AT5G40330.1 56.364 110 46 2 13 121 13 121 1.72e-38 136
Msa1462610 AT2G32460.1 58.095 105 43 1 12 116 18 121 3.80e-38 142
Msa1462610 AT2G32460.2 58.095 105 43 1 12 116 6 109 3.98e-38 142
Msa1462610 AT5G06100.1 57.798 109 45 1 8 116 28 135 7.50e-38 140
Msa1462610 AT5G55020.1 57.547 106 44 1 12 117 26 130 1.19e-37 141
Msa1462610 AT5G12870.1 57.547 106 44 1 12 117 18 122 1.60e-37 136
Msa1462610 AT5G06100.5 57.798 109 45 1 8 116 28 135 2.38e-37 140
Msa1462610 AT5G06100.2 57.798 109 45 1 8 116 28 135 2.38e-37 140
Msa1462610 AT5G06100.3 57.798 109 45 1 8 116 28 135 2.38e-37 140
Msa1462610 AT5G06100.4 57.798 109 45 1 8 116 28 135 2.38e-37 140
Msa1462610 AT1G18710.1 51.282 117 56 1 1 117 1 116 2.96e-37 135
Msa1462610 AT4G26930.1 56.731 104 44 1 12 115 19 121 3.25e-37 137
Msa1462610 AT5G35550.1 41.143 175 87 4 9 181 11 171 5.05e-37 134
Msa1462610 AT3G11440.2 53.704 108 49 1 9 116 38 144 6.69e-37 138
Msa1462610 AT3G27810.1 55.963 109 47 1 9 117 17 124 2.22e-36 131
Msa1462610 AT3G11440.3 53.704 108 49 1 9 116 38 144 3.28e-36 137
Msa1462610 AT3G11440.4 53.704 108 49 1 9 116 38 144 3.28e-36 137
Msa1462610 AT3G11440.1 53.704 108 49 1 9 116 38 144 3.28e-36 137
Msa1462610 AT3G01530.1 51.818 110 52 1 8 117 21 129 1.24e-35 129
Msa1462610 AT3G08500.1 55.455 110 48 1 8 117 26 134 1.36e-35 132
Msa1462610 AT5G40350.1 54.128 109 49 1 10 118 15 122 2.48e-35 128
Msa1462610 AT1G48000.1 57.798 109 43 2 12 118 32 139 5.68e-35 128
Msa1462610 AT4G25560.1 57.547 106 44 1 13 118 11 115 6.33e-35 129
Msa1462610 AT2G26960.1 53.271 107 49 1 9 115 17 122 9.37e-35 132
Msa1462610 AT5G52260.1 59.091 110 44 1 9 118 9 117 1.65e-34 127
Msa1462610 AT3G48920.1 50.000 122 59 2 9 129 15 135 1.99e-34 127
Msa1462610 AT3G24310.1 51.667 120 55 2 13 132 19 135 1.11e-33 125
Msa1462610 AT4G13480.1 56.731 104 44 1 13 116 7 109 1.81e-33 124
Msa1462610 AT1G66370.1 49.138 116 54 2 1 116 1 111 5.01e-33 123
Msa1462610 AT2G47190.1 50.862 116 54 2 8 123 16 128 5.40e-33 124
Msa1462610 AT3G30210.1 41.447 152 82 2 13 158 28 178 6.83e-33 123
Msa1462610 AT1G25340.1 54.206 107 48 1 10 116 16 121 1.37e-32 123
Msa1462610 AT5G14750.3 46.617 133 61 2 39 171 11 133 4.41e-32 118
Msa1462610 AT1G66380.1 53.333 105 48 1 12 116 8 111 1.36e-31 116
Msa1462610 AT1G68320.1 51.429 105 50 1 12 116 19 122 9.58e-31 118
Msa1462610 AT5G26660.2 60.976 82 32 0 39 120 7 88 9.74e-31 119
Msa1462610 AT1G66390.1 52.381 105 49 1 12 116 8 111 1.60e-30 116
Msa1462610 AT1G56650.1 52.381 105 49 1 12 116 8 111 2.50e-30 116
Msa1462610 AT3G06490.1 54.630 108 48 1 8 115 15 121 2.74e-30 117
Msa1462610 AT2G26950.1 35.938 192 99 4 9 177 13 203 7.43e-30 117
Msa1462610 AT5G49620.1 53.704 108 49 1 8 115 22 128 8.15e-30 116
Msa1462610 AT3G53200.1 53.333 105 48 1 12 116 9 112 1.81e-29 113
Msa1462610 AT5G59780.3 47.273 110 57 1 13 122 9 117 1.55e-28 110
Msa1462610 AT3G46130.1 47.273 110 57 1 13 122 10 118 1.82e-28 111
Msa1462610 AT1G25340.2 51.402 107 46 2 10 116 16 116 5.00e-28 110
Msa1462610 AT3G60460.1 48.148 108 54 2 9 115 8 114 7.25e-28 110
Msa1462610 AT1G25340.3 51.402 107 46 2 10 116 16 116 8.96e-28 110
Msa1462610 AT2G23290.1 47.154 123 63 2 14 136 13 133 1.25e-27 110
Msa1462610 AT5G35550.2 48.598 107 53 1 39 143 43 149 1.74e-27 108
Msa1462610 AT3G47600.2 50.450 111 50 1 45 155 38 143 7.20e-27 108
Msa1462610 AT5G49620.2 47.200 125 45 3 8 115 22 142 1.54e-26 107
Msa1462610 AT3G27810.2 61.644 73 28 0 45 117 3 75 2.92e-26 103
Msa1462610 AT3G50060.1 48.182 110 55 2 10 119 2 109 5.08e-26 105
Msa1462610 AT5G67300.1 47.368 114 57 3 10 122 2 113 5.23e-26 105
Msa1462610 AT3G12820.2 61.111 72 28 0 49 120 2 73 6.32e-26 102
Msa1462610 AT4G37260.1 49.515 103 50 2 14 116 13 113 1.05e-25 105
Msa1462610 AT3G53200.2 63.014 73 27 0 44 116 7 79 2.74e-25 101
Msa1462610 AT3G09230.1 39.041 146 80 4 14 158 55 192 3.90e-25 105
Msa1462610 AT5G40350.2 58.108 74 31 0 45 118 4 77 4.15e-25 100
Msa1462610 AT3G27785.1 41.176 136 68 3 9 144 184 307 6.70e-25 104
Msa1462610 AT1G18960.1 44.231 104 54 2 14 117 10 109 6.94e-25 102
Msa1462610 AT5G58850.1 42.609 115 63 3 11 124 102 214 2.22e-24 103
Msa1462610 AT5G59780.2 55.696 79 35 0 44 122 18 96 2.30e-24 99.4
Msa1462610 AT3G46130.4 55.696 79 35 0 44 122 18 96 3.70e-24 99.4
Msa1462610 AT1G66380.3 61.111 72 28 0 45 116 7 78 4.48e-24 95.1
Msa1462610 AT3G55730.1 50.485 103 49 2 14 116 56 156 7.55e-24 101
Msa1462610 AT2G39880.1 49.515 103 50 2 14 116 50 150 8.98e-24 100
Msa1462610 AT1G17950.1 40.800 125 68 4 14 138 5 123 1.58e-23 97.8
Msa1462610 AT3G46130.3 55.844 77 34 0 46 122 10 86 1.80e-23 97.1
Msa1462610 AT5G40360.1 35.616 146 92 2 12 157 156 299 2.35e-23 99.8
Msa1462610 AT1G69560.1 41.284 109 62 2 9 117 102 208 1.20e-22 97.1
Msa1462610 AT1G69560.2 41.284 109 62 2 9 117 118 224 1.64e-22 97.1
Msa1462610 AT2G25230.1 45.631 103 54 2 9 111 21 121 1.68e-22 94.7
Msa1462610 AT5G17800.1 39.823 113 66 2 14 126 93 203 4.87e-22 95.1
Msa1462610 AT5G14750.4 43.363 113 57 1 59 171 1 106 9.25e-22 90.1
Msa1462610 AT5G14750.2 43.363 113 57 1 59 171 1 106 9.25e-22 90.1
Msa1462610 AT1G22640.3 42.453 106 57 1 59 164 1 102 1.08e-21 91.7
Msa1462610 AT4G18770.1 41.284 109 62 2 9 117 212 318 1.10e-21 95.5
Msa1462610 AT3G09370.1 38.298 141 82 3 14 151 130 268 9.11e-21 93.6
Msa1462610 AT3G09370.3 38.298 141 82 3 14 151 143 281 9.66e-21 93.6
Msa1462610 AT3G09370.2 38.298 141 82 3 14 151 135 273 9.70e-21 93.6
Msa1462610 AT1G26780.1 40.777 103 59 2 14 116 98 198 1.43e-20 90.5
Msa1462610 AT1G73410.1 45.631 103 54 2 14 116 6 106 1.56e-20 89.7
Msa1462610 AT5G11050.1 30.256 195 119 6 11 203 102 281 1.88e-20 92.0
Msa1462610 AT1G26780.2 40.777 103 59 2 14 116 98 198 2.39e-20 90.9
Msa1462610 AT1G73410.2 45.631 103 54 2 14 116 6 106 3.63e-20 87.4
Msa1462610 AT5G02320.3 41.346 104 59 2 14 117 67 168 1.27e-19 90.1
Msa1462610 AT5G02320.3 34.653 101 63 3 14 113 15 113 5.04e-11 63.9
Msa1462610 AT5G02320.1 41.346 104 59 2 14 117 127 228 1.30e-19 90.1
Msa1462610 AT5G02320.1 34.653 101 63 3 14 113 75 173 4.89e-11 64.3
Msa1462610 AT5G02320.2 41.346 104 59 2 14 117 127 228 1.30e-19 90.1
Msa1462610 AT5G02320.2 34.653 101 63 3 14 113 75 173 4.89e-11 64.3
Msa1462610 AT4G33450.1 39.815 108 63 2 9 116 14 119 3.03e-19 86.3
Msa1462610 AT1G71030.2 52.239 67 32 0 52 118 5 71 5.38e-19 84.0
Msa1462610 AT1G71030.1 52.239 67 32 0 52 118 19 85 7.03e-19 84.0
Msa1462610 AT3G23250.2 59.322 59 24 0 59 117 1 59 1.32e-18 84.0
Msa1462610 AT2G02820.3 42.857 105 56 3 17 121 33 133 5.13e-18 84.0
Msa1462610 AT5G40430.1 39.806 103 59 2 9 111 49 148 5.59e-18 82.8
Msa1462610 AT2G02820.1 42.857 105 56 3 17 121 33 133 6.70e-18 84.7
Msa1462610 AT2G02820.2 41.905 105 57 3 17 121 33 133 8.31e-18 84.7
Msa1462610 AT1G14350.2 41.905 105 57 3 17 121 28 128 1.61e-17 83.6
Msa1462610 AT1G14350.1 41.905 105 57 3 17 121 28 128 1.61e-17 83.6
Msa1462610 AT4G32730.1 39.423 104 61 2 14 117 87 188 1.63e-17 84.3
Msa1462610 AT4G32730.5 39.423 104 61 2 14 117 87 188 1.71e-17 84.3
Msa1462610 AT4G32730.4 39.423 104 61 2 14 117 87 188 1.71e-17 84.3
Msa1462610 AT4G32730.3 39.423 104 61 2 14 117 87 188 1.71e-17 84.3
Msa1462610 AT4G32730.2 39.423 104 61 2 14 117 87 188 1.71e-17 84.3
Msa1462610 AT3G29020.1 35.577 104 65 2 14 117 65 166 3.51e-17 80.1
Msa1462610 AT5G11510.3 38.462 104 62 2 14 117 81 182 3.90e-17 83.2
Msa1462610 AT5G11510.1 38.462 104 62 2 14 117 81 182 3.90e-17 83.2
Msa1462610 AT5G11510.4 38.462 104 62 2 14 117 81 182 3.90e-17 83.2
Msa1462610 AT3G29020.2 35.577 104 65 2 14 117 67 168 4.07e-17 81.3
Msa1462610 AT5G11510.5 38.462 104 62 2 14 117 81 182 4.20e-17 82.8
Msa1462610 AT2G37630.1 34.307 137 77 3 17 151 7 132 4.43e-17 81.6
Msa1462610 AT5G11510.2 38.462 104 62 2 14 117 81 182 4.50e-17 82.8
Msa1462610 AT1G66380.2 43.902 82 45 1 12 93 8 88 7.46e-17 75.9
Msa1462610 AT4G00540.2 35.780 109 67 2 11 117 100 207 8.65e-15 75.1
Msa1462610 AT4G00540.1 35.780 109 67 2 11 117 98 205 1.28e-14 74.7
Msa1462610 AT5G39700.1 34.653 101 64 2 15 115 57 155 1.08e-12 66.2
Msa1462610 AT5G61420.1 32.558 129 76 1 82 210 2 119 4.48e-12 66.2
Msa1462610 AT3G18100.1 31.169 154 95 4 12 162 544 689 2.58e-11 65.5
Msa1462610 AT3G18100.4 31.169 154 95 4 12 162 383 528 3.20e-11 65.1
Msa1462610 AT3G18100.3 31.169 154 95 4 12 162 496 641 3.46e-11 65.1
Msa1462610 AT3G18100.2 31.169 154 95 4 12 162 331 476 4.34e-11 64.3

Find 72 sgRNAs with CRISPR-Local

Find 208 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACCCATGTTGGTGTCTTTC+TGG 0.019822 tig0042464:+7654 Msa1462610:intergenic
CACAATTTAACCTTGGTATT+TGG 0.131923 tig0042464:+6159 Msa1462610:intergenic
TACAAGGTTCTAGTATTAAT+TGG 0.175164 tig0042464:-6222 Msa1462610:CDS
GTTGGTGTCTTTCTGGGTTT+TGG 0.264251 tig0042464:+7661 Msa1462610:intergenic
TTGAGTTTAGCATCTTCTTC+TGG 0.285093 tig0042464:+7584 Msa1462610:intergenic
GATACCATATGATCAATTTC+TGG 0.294149 tig0042464:+6322 Msa1462610:intergenic
ACCCATGTTGGTGTCTTTCT+GGG 0.297929 tig0042464:+7655 Msa1462610:intergenic
CTTGATCATTGAAGCCTTGT+TGG 0.313961 tig0042464:+6599 Msa1462610:intergenic
AACCACCATGTTTGAGATTA+GGG 0.322373 tig0042464:+7255 Msa1462610:intergenic
CAACCATCAAAAGTAGTATT+AGG 0.326180 tig0042464:+6520 Msa1462610:intergenic
CTTGTTGCTGCTGATCTTTA+CGG 0.335855 tig0042464:+6803 Msa1462610:intergenic
ACAAGGTTCTAGTATTAATT+GGG 0.336603 tig0042464:-6221 Msa1462610:CDS
AAACCACCATGTTTGAGATT+AGG 0.366318 tig0042464:+7254 Msa1462610:intergenic
AATTATCCACCAAGATTTGA+TGG 0.368986 tig0042464:-6295 Msa1462610:CDS
AACATGGTACTGGTGGTAAC+TGG 0.369571 tig0042464:-7547 Msa1462610:CDS
ATAATGACATAAAGAACTAT+TGG 0.370430 tig0042464:-6861 Msa1462610:CDS
CATTCCAGAAATTGATCATA+TGG 0.373903 tig0042464:-6326 Msa1462610:CDS
TTGGTTGTGGTTGTTATCAT+TGG 0.385791 tig0042464:+6408 Msa1462610:intergenic
GATAATGTTATCTTCTTCTT+CGG 0.391795 tig0042464:+7229 Msa1462610:intergenic
ATGTCATTATCAGTTCTTCC+TGG 0.397545 tig0042464:+6874 Msa1462610:intergenic
TTCTTGAACCAAATTTGATA+AGG 0.407035 tig0042464:+6702 Msa1462610:intergenic
TGCATGACATGTGGTAAATA+TGG 0.407502 tig0042464:+6676 Msa1462610:intergenic
AGAAAACTTCTTATGAAGCT+TGG 0.411643 tig0042464:-6568 Msa1462610:CDS
TGCAGCCTTTACATTAGTAT+TGG 0.421799 tig0042464:-7206 Msa1462610:CDS
GCTCGTAATAGAGGCAATAA+TGG 0.432154 tig0042464:-6781 Msa1462610:CDS
CAGCAACAAGCTCGTAATAG+AGG 0.461617 tig0042464:-6790 Msa1462610:CDS
AATTCCAACCCATCAAATCT+TGG 0.462721 tig0042464:+6286 Msa1462610:intergenic
TCCACCAAGATTTGATGGGT+TGG 0.464644 tig0042464:-6290 Msa1462610:CDS
CATTTGTTGCGAATTGTACT+TGG 0.466808 tig0042464:+6389 Msa1462610:intergenic
AACATTGATGGTAGTGGAGG+TGG 0.467582 tig0042464:+6634 Msa1462610:intergenic
CAAGTACAATTCGCAACAAA+TGG 0.468082 tig0042464:-6388 Msa1462610:CDS
TTGCGAATTGTACTTGGTTG+TGG 0.482944 tig0042464:+6395 Msa1462610:intergenic
AAACTTCTTATGAAGCTTGG+AGG 0.489488 tig0042464:-6565 Msa1462610:CDS
TTTACATTAGTATTGGAAGC+AGG 0.496580 tig0042464:-7199 Msa1462610:intron
TTTGTGTATGACAACATTGA+TGG 0.508144 tig0042464:+6622 Msa1462610:intergenic
TGCTTCCAATACTAATGTAA+AGG 0.512738 tig0042464:+7201 Msa1462610:intergenic
GTGGAAAGAGTTGTCGTCTC+CGG 0.522056 tig0042464:-7295 Msa1462610:CDS
CACAAATCACAATTTAACCT+TGG 0.527729 tig0042464:+6152 Msa1462610:intergenic
TACATAGAACAACATGGTAC+TGG 0.531565 tig0042464:-7557 Msa1462610:CDS
CATTGATGGTAGTGGAGGTG+GGG 0.533607 tig0042464:+6636 Msa1462610:intergenic
ACATTGATGGTAGTGGAGGT+GGG 0.534119 tig0042464:+6635 Msa1462610:intergenic
GACAAAGCAAACGTGAAGAA+AGG 0.540882 tig0042464:-7617 Msa1462610:CDS
GCATCTTCTTCTGGAGACCA+TGG 0.546774 tig0042464:+7593 Msa1462610:intergenic
CCTTGGTATTTGGAATCAAG+AGG 0.548952 tig0042464:+6169 Msa1462610:intergenic
ATAATTGCAGCTCAATTGCC+AGG 0.552173 tig0042464:-6892 Msa1462610:CDS
ATTATCCACCAAGATTTGAT+GGG 0.556403 tig0042464:-6294 Msa1462610:CDS
TATGACAACATTGATGGTAG+TGG 0.558740 tig0042464:+6628 Msa1462610:intergenic
ATTGATGGTAGTGGAGGTGG+GGG 0.560501 tig0042464:+6637 Msa1462610:intergenic
GGCGAAGATAGTTTAGCCAC+CGG 0.569935 tig0042464:+7276 Msa1462610:intergenic
TAAAGAACTATTGGAATACA+AGG 0.580554 tig0042464:-6852 Msa1462610:CDS
TCCAACCCATCAAATCTTGG+TGG 0.591459 tig0042464:+6289 Msa1462610:intergenic
ATTGATAATAATAAGATACA+AGG 0.601954 tig0042464:-6238 Msa1462610:CDS
AGTTTATGATCAAGAACATG+TGG 0.602665 tig0042464:-6455 Msa1462610:CDS
GAAAGAGTTGTCGTCTCCGG+TGG 0.603936 tig0042464:-7292 Msa1462610:CDS
CTTCGCCCTAATCTCAAACA+TGG 0.609085 tig0042464:-7260 Msa1462610:CDS
ACGTTTGCTTTGTCACAACA+AGG 0.610378 tig0042464:+7626 Msa1462610:intergenic
GACTCGGTGCAAGAAGAGCA+AGG 0.613143 tig0042464:-6355 Msa1462610:CDS
CAAGGTTCTAGTATTAATTG+GGG 0.621220 tig0042464:-6220 Msa1462610:CDS
ACAAGGAGCTCTACCCATGT+TGG 0.624253 tig0042464:+7643 Msa1462610:intergenic
CAAACGTGAAGAAAGGTCCA+TGG 0.630589 tig0042464:-7610 Msa1462610:CDS
CCTCTTGATTCCAAATACCA+AGG 0.634631 tig0042464:-6169 Msa1462610:CDS
AGGATGATGATAACTTGAAG+TGG 0.634882 tig0042464:+6189 Msa1462610:intergenic
CGCCCTAATCTCAAACATGG+TGG 0.637157 tig0042464:-7257 Msa1462610:CDS
AACCCAGAAAGACACCAACA+TGG 0.640355 tig0042464:-7657 Msa1462610:exon
ATAGAACAACATGGTACTGG+TGG 0.656499 tig0042464:-7554 Msa1462610:CDS
TTGTCATACACAAACCAACA+AGG 0.660089 tig0042464:-6613 Msa1462610:CDS
GTTTATGATCAAGAACATGT+GGG 0.665568 tig0042464:-6454 Msa1462610:CDS
ACCCAGAAAGACACCAACAT+GGG 0.673987 tig0042464:-7656 Msa1462610:exon
AAATGGTCAATACTTTGACT+CGG 0.679619 tig0042464:-6371 Msa1462610:CDS
GACAACATTGATGGTAGTGG+AGG 0.681316 tig0042464:+6631 Msa1462610:intergenic
AAATCTTACATAGAACAACA+TGG 0.711431 tig0042464:-7563 Msa1462610:CDS
AGCAAAGGTTGCATGACATG+TGG 0.714384 tig0042464:+6667 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAACATATTGAAAAAATTA+GGG + tig0042464:6401-6420 Msa1462610:intergenic 10.0%
!! TTAAAAAAAATTCAAACTAT+TGG + tig0042464:6876-6895 Msa1462610:intergenic 10.0%
!! TAAACATATTGAAAAAATTA+GGG + tig0042464:6401-6420 Msa1462610:intergenic 10.0%
!! TTAAAAAAAATTCAAACTAT+TGG + tig0042464:6876-6895 Msa1462610:intergenic 10.0%
!!! ATAATATTACCAATTTTTTG+TGG + tig0042464:6365-6384 Msa1462610:intergenic 15.0%
!! GTAAACATATTGAAAAAATT+AGG + tig0042464:6402-6421 Msa1462610:intergenic 15.0%
!!! AGATTAACCTAATTTTTTTT+TGG - tig0042464:6537-6556 Msa1462610:CDS 15.0%
!!! GATTAACCTAATTTTTTTTT+GGG - tig0042464:6538-6557 Msa1462610:CDS 15.0%
!!! ATTGATAATAATAAGATACA+AGG - tig0042464:7639-7658 Msa1462610:CDS 15.0%
!!! ATAATATTACCAATTTTTTG+TGG + tig0042464:6365-6384 Msa1462610:intergenic 15.0%
!! GTAAACATATTGAAAAAATT+AGG + tig0042464:6402-6421 Msa1462610:intergenic 15.0%
!!! AGATTAACCTAATTTTTTTT+TGG - tig0042464:6537-6556 Msa1462610:CDS 15.0%
!!! GATTAACCTAATTTTTTTTT+GGG - tig0042464:6538-6557 Msa1462610:CDS 15.0%
!!! ATTGATAATAATAAGATACA+AGG - tig0042464:7639-7658 Msa1462610:CDS 15.0%
!! TTTATCAAGGAAAAAAAGAA+AGG + tig0042464:6435-6454 Msa1462610:intergenic 20.0%
!! GATGAATAACAAATTTATCA+AGG + tig0042464:6448-6467 Msa1462610:intergenic 20.0%
!! ATCTATAAAATCAAGACATA+AGG + tig0042464:6799-6818 Msa1462610:intergenic 20.0%
!! ACAAAAAGTAACATATCATA+TGG + tig0042464:6843-6862 Msa1462610:intergenic 20.0%
!!! TGATATGTTACTTTTTGTTT+TGG - tig0042464:6845-6864 Msa1462610:CDS 20.0%
!! ATAATGACATAAAGAACTAT+TGG - tig0042464:7016-7035 Msa1462610:intron 20.0%
!!! TGAATTTTCCTTATCAAATT+TGG - tig0042464:7167-7186 Msa1462610:intron 20.0%
!! TTTATCAAGGAAAAAAAGAA+AGG + tig0042464:6435-6454 Msa1462610:intergenic 20.0%
!! GATGAATAACAAATTTATCA+AGG + tig0042464:6448-6467 Msa1462610:intergenic 20.0%
!! ATCTATAAAATCAAGACATA+AGG + tig0042464:6799-6818 Msa1462610:intergenic 20.0%
!! ACAAAAAGTAACATATCATA+TGG + tig0042464:6843-6862 Msa1462610:intergenic 20.0%
!!! TGATATGTTACTTTTTGTTT+TGG - tig0042464:6845-6864 Msa1462610:CDS 20.0%
!! ATAATGACATAAAGAACTAT+TGG - tig0042464:7016-7035 Msa1462610:intron 20.0%
!!! TGAATTTTCCTTATCAAATT+TGG - tig0042464:7167-7186 Msa1462610:intron 20.0%
!!! AGCTTTTTTATGATTGATTG+GGG + tig0042464:6181-6200 Msa0120190:intergenic 25.0%
!!! GAGCTTTTTTATGATTGATT+GGG + tig0042464:6182-6201 Msa0120190:intergenic 25.0%
!!! AGAGCTTTTTTATGATTGAT+TGG + tig0042464:6183-6202 Msa0120190:intergenic 25.0%
! AAATCTTACATAGAACAACA+TGG - tig0042464:6314-6333 Msa1462610:CDS 25.0%
!!! TAACCTAATTTTTTTTTGGG+TGG - tig0042464:6541-6560 Msa1462610:CDS 25.0%
! AAACCACCCAAAAAAAAATT+AGG + tig0042464:6547-6566 Msa1462610:intergenic 25.0%
!!! ATTTTTTTTTGGGTGGTTTT+AGG - tig0042464:6548-6567 Msa1462610:CDS 25.0%
! GATAATGTTATCTTCTTCTT+CGG + tig0042464:6651-6670 Msa1462610:intergenic 25.0%
! TAAAGAACTATTGGAATACA+AGG - tig0042464:7025-7044 Msa1462610:intron 25.0%
! TTCTTGAACCAAATTTGATA+AGG + tig0042464:7178-7197 Msa1462610:intergenic 25.0%
!! TACAAGGTTCTAGTATTAAT+TGG - tig0042464:7655-7674 Msa1462610:exon 25.0%
!! ACAAGGTTCTAGTATTAATT+GGG - tig0042464:7656-7675 Msa1462610:exon 25.0%
!!! AGCTTTTTTATGATTGATTG+GGG + tig0042464:6181-6200 Msa1462610:intergenic 25.0%
!!! GAGCTTTTTTATGATTGATT+GGG + tig0042464:6182-6201 Msa1462610:intergenic 25.0%
!!! AGAGCTTTTTTATGATTGAT+TGG + tig0042464:6183-6202 Msa1462610:intergenic 25.0%
! AAATCTTACATAGAACAACA+TGG - tig0042464:6314-6333 Msa1462610:CDS 25.0%
!!! TAACCTAATTTTTTTTTGGG+TGG - tig0042464:6541-6560 Msa1462610:CDS 25.0%
! AAACCACCCAAAAAAAAATT+AGG + tig0042464:6547-6566 Msa1462610:intergenic 25.0%
!!! ATTTTTTTTTGGGTGGTTTT+AGG - tig0042464:6548-6567 Msa1462610:CDS 25.0%
! GATAATGTTATCTTCTTCTT+CGG + tig0042464:6651-6670 Msa1462610:intergenic 25.0%
! TAAAGAACTATTGGAATACA+AGG - tig0042464:7025-7044 Msa1462610:intron 25.0%
! TTCTTGAACCAAATTTGATA+AGG + tig0042464:7178-7197 Msa1462610:intergenic 25.0%
!! TACAAGGTTCTAGTATTAAT+TGG - tig0042464:7655-7674 Msa1462610:exon 25.0%
!! ACAAGGTTCTAGTATTAATT+GGG - tig0042464:7656-7675 Msa1462610:exon 25.0%
ATTGCTCTTCCACAAAAAAT+TGG - tig0042464:6353-6372 Msa1462610:CDS 30.0%
CAAATGAAGTGAAGATATAG+TGG + tig0042464:6470-6489 Msa1462610:intergenic 30.0%
TGCTTCCAATACTAATGTAA+AGG + tig0042464:6679-6698 Msa1462610:intergenic 30.0%
! TTTACATTAGTATTGGAAGC+AGG - tig0042464:6678-6697 Msa1462610:CDS 30.0%
CTTTCATACCAAACCAAAAA+GGG + tig0042464:6955-6974 Msa1462610:intergenic 30.0%
! AAGGTTGAAAAAGAAGCTTT+TGG - tig0042464:7044-7063 Msa1462610:intron 30.0%
! AGGTTGAAAAAGAAGCTTTT+GGG - tig0042464:7045-7064 Msa1462610:intron 30.0%
TTTGTGTATGACAACATTGA+TGG + tig0042464:7258-7277 Msa1462610:intergenic 30.0%
AGAAAACTTCTTATGAAGCT+TGG - tig0042464:7309-7328 Msa1462610:CDS 30.0%
!! CATCCTAATACTACTTTTGA+TGG - tig0042464:7354-7373 Msa1462610:intron 30.0%
CAACCATCAAAAGTAGTATT+AGG + tig0042464:7360-7379 Msa1462610:intergenic 30.0%
AGTTTATGATCAAGAACATG+TGG - tig0042464:7422-7441 Msa1462610:intron 30.0%
GTTTATGATCAAGAACATGT+GGG - tig0042464:7423-7442 Msa1462610:intron 30.0%
AAATGGTCAATACTTTGACT+CGG - tig0042464:7506-7525 Msa1462610:intron 30.0%
CATTCCAGAAATTGATCATA+TGG - tig0042464:7551-7570 Msa1462610:CDS 30.0%
GATACCATATGATCAATTTC+TGG + tig0042464:7558-7577 Msa1462610:intergenic 30.0%
AATTATCCACCAAGATTTGA+TGG - tig0042464:7582-7601 Msa1462610:CDS 30.0%
ATTATCCACCAAGATTTGAT+GGG - tig0042464:7583-7602 Msa1462610:CDS 30.0%
! CAAGGTTCTAGTATTAATTG+GGG - tig0042464:7657-7676 Msa1462610:exon 30.0%
ATTGCTCTTCCACAAAAAAT+TGG - tig0042464:6353-6372 Msa1462610:CDS 30.0%
CAAATGAAGTGAAGATATAG+TGG + tig0042464:6470-6489 Msa1462610:intergenic 30.0%
TGCTTCCAATACTAATGTAA+AGG + tig0042464:6679-6698 Msa1462610:intergenic 30.0%
! TTTACATTAGTATTGGAAGC+AGG - tig0042464:6678-6697 Msa1462610:CDS 30.0%
CTTTCATACCAAACCAAAAA+GGG + tig0042464:6955-6974 Msa1462610:intergenic 30.0%
! AAGGTTGAAAAAGAAGCTTT+TGG - tig0042464:7044-7063 Msa1462610:intron 30.0%
! AGGTTGAAAAAGAAGCTTTT+GGG - tig0042464:7045-7064 Msa1462610:intron 30.0%
TTTGTGTATGACAACATTGA+TGG + tig0042464:7258-7277 Msa1462610:intergenic 30.0%
AGAAAACTTCTTATGAAGCT+TGG - tig0042464:7309-7328 Msa1462610:CDS 30.0%
!! CATCCTAATACTACTTTTGA+TGG - tig0042464:7354-7373 Msa1462610:intron 30.0%
CAACCATCAAAAGTAGTATT+AGG + tig0042464:7360-7379 Msa1462610:intergenic 30.0%
AGTTTATGATCAAGAACATG+TGG - tig0042464:7422-7441 Msa1462610:intron 30.0%
GTTTATGATCAAGAACATGT+GGG - tig0042464:7423-7442 Msa1462610:intron 30.0%
AAATGGTCAATACTTTGACT+CGG - tig0042464:7506-7525 Msa1462610:intron 30.0%
CATTCCAGAAATTGATCATA+TGG - tig0042464:7551-7570 Msa1462610:CDS 30.0%
GATACCATATGATCAATTTC+TGG + tig0042464:7558-7577 Msa1462610:intergenic 30.0%
AATTATCCACCAAGATTTGA+TGG - tig0042464:7582-7601 Msa1462610:CDS 30.0%
ATTATCCACCAAGATTTGAT+GGG - tig0042464:7583-7602 Msa1462610:CDS 30.0%
! CAAGGTTCTAGTATTAATTG+GGG - tig0042464:7657-7676 Msa1462610:exon 30.0%
TTGAGTTTAGCATCTTCTTC+TGG + tig0042464:6296-6315 Msa1462610:intergenic 35.0%
TACATAGAACAACATGGTAC+TGG - tig0042464:6320-6339 Msa1462610:CDS 35.0%
! AACCACCATGTTTGAGATTA+GGG + tig0042464:6625-6644 Msa1462610:intergenic 35.0%
! AAACCACCATGTTTGAGATT+AGG + tig0042464:6626-6645 Msa1462610:intergenic 35.0%
TGCAGCCTTTACATTAGTAT+TGG - tig0042464:6671-6690 Msa1462610:CDS 35.0%
! TGAAAAGTGAAGACCCTTTT+TGG - tig0042464:6939-6958 Msa1462610:intron 35.0%
GCTTTCATACCAAACCAAAA+AGG + tig0042464:6956-6975 Msa1462610:intergenic 35.0%
!!! TTTTGGTTTGGTATGAAAGC+AGG - tig0042464:6956-6975 Msa1462610:intron 35.0%
ATGTCATTATCAGTTCTTCC+TGG + tig0042464:7006-7025 Msa1462610:intergenic 35.0%
! GGTTGAAAAAGAAGCTTTTG+GGG - tig0042464:7046-7065 Msa1462610:intron 35.0%
TGCATGACATGTGGTAAATA+TGG + tig0042464:7204-7223 Msa1462610:intergenic 35.0%
! TATGACAACATTGATGGTAG+TGG + tig0042464:7252-7271 Msa1462610:intergenic 35.0%
TTGTCATACACAAACCAACA+AGG - tig0042464:7264-7283 Msa1462610:CDS 35.0%
AAACTTCTTATGAAGCTTGG+AGG - tig0042464:7312-7331 Msa1462610:intron 35.0%
TTGGTTGTGGTTGTTATCAT+TGG + tig0042464:7472-7491 Msa1462610:intergenic 35.0%
! CATTTGTTGCGAATTGTACT+TGG + tig0042464:7491-7510 Msa1462610:intergenic 35.0%
CAAGTACAATTCGCAACAAA+TGG - tig0042464:7489-7508 Msa1462610:intron 35.0%
AATTCCAACCCATCAAATCT+TGG + tig0042464:7594-7613 Msa1462610:intergenic 35.0%
!!! GATGGGTTGGAATTCTTTTA+TGG - tig0042464:7600-7619 Msa1462610:CDS 35.0%
AGGATGATGATAACTTGAAG+TGG + tig0042464:7691-7710 Msa1462610:intergenic 35.0%
TTGAGTTTAGCATCTTCTTC+TGG + tig0042464:6296-6315 Msa1462610:intergenic 35.0%
TACATAGAACAACATGGTAC+TGG - tig0042464:6320-6339 Msa1462610:CDS 35.0%
! AACCACCATGTTTGAGATTA+GGG + tig0042464:6625-6644 Msa1462610:intergenic 35.0%
! AAACCACCATGTTTGAGATT+AGG + tig0042464:6626-6645 Msa1462610:intergenic 35.0%
TGCAGCCTTTACATTAGTAT+TGG - tig0042464:6671-6690 Msa1462610:CDS 35.0%
! TGAAAAGTGAAGACCCTTTT+TGG - tig0042464:6939-6958 Msa1462610:intron 35.0%
GCTTTCATACCAAACCAAAA+AGG + tig0042464:6956-6975 Msa1462610:intergenic 35.0%
!!! TTTTGGTTTGGTATGAAAGC+AGG - tig0042464:6956-6975 Msa1462610:intron 35.0%
ATGTCATTATCAGTTCTTCC+TGG + tig0042464:7006-7025 Msa1462610:intergenic 35.0%
! GGTTGAAAAAGAAGCTTTTG+GGG - tig0042464:7046-7065 Msa1462610:intron 35.0%
TGCATGACATGTGGTAAATA+TGG + tig0042464:7204-7223 Msa1462610:intergenic 35.0%
! TATGACAACATTGATGGTAG+TGG + tig0042464:7252-7271 Msa1462610:intergenic 35.0%
TTGTCATACACAAACCAACA+AGG - tig0042464:7264-7283 Msa1462610:CDS 35.0%
AAACTTCTTATGAAGCTTGG+AGG - tig0042464:7312-7331 Msa1462610:intron 35.0%
TTGGTTGTGGTTGTTATCAT+TGG + tig0042464:7472-7491 Msa1462610:intergenic 35.0%
! CATTTGTTGCGAATTGTACT+TGG + tig0042464:7491-7510 Msa1462610:intergenic 35.0%
CAAGTACAATTCGCAACAAA+TGG - tig0042464:7489-7508 Msa1462610:intron 35.0%
AATTCCAACCCATCAAATCT+TGG + tig0042464:7594-7613 Msa1462610:intergenic 35.0%
!!! GATGGGTTGGAATTCTTTTA+TGG - tig0042464:7600-7619 Msa1462610:CDS 35.0%
AGGATGATGATAACTTGAAG+TGG + tig0042464:7691-7710 Msa1462610:intergenic 35.0%
ACGTTTGCTTTGTCACAACA+AGG + tig0042464:6254-6273 Msa1462610:intergenic 40.0%
GACAAAGCAAACGTGAAGAA+AGG - tig0042464:6260-6279 Msa1462610:CDS 40.0%
! ATAGAACAACATGGTACTGG+TGG - tig0042464:6323-6342 Msa1462610:CDS 40.0%
!!! AGTGAAGACCCTTTTTGGTT+TGG - tig0042464:6944-6963 Msa1462610:intron 40.0%
ATAATTGCAGCTCAATTGCC+AGG - tig0042464:6985-7004 Msa1462610:intron 40.0%
CTTGTTGCTGCTGATCTTTA+CGG + tig0042464:7077-7096 Msa1462610:intergenic 40.0%
GCTCGTAATAGAGGCAATAA+TGG - tig0042464:7096-7115 Msa1462610:intron 40.0%
! CTTGATCATTGAAGCCTTGT+TGG + tig0042464:7281-7300 Msa1462610:intergenic 40.0%
! AAGCTTGGAGGAAGATTTTC+AGG - tig0042464:7324-7343 Msa1462610:intron 40.0%
TTGCGAATTGTACTTGGTTG+TGG + tig0042464:7485-7504 Msa1462610:intergenic 40.0%
! CCTTGGTATTTGGAATCAAG+AGG + tig0042464:7711-7730 Msa1462610:intergenic 40.0%
CCTCTTGATTCCAAATACCA+AGG - tig0042464:7708-7727 Msa1462610:five_prime_UTR 40.0%
ACGTTTGCTTTGTCACAACA+AGG + tig0042464:6254-6273 Msa1462610:intergenic 40.0%
GACAAAGCAAACGTGAAGAA+AGG - tig0042464:6260-6279 Msa1462610:CDS 40.0%
! ATAGAACAACATGGTACTGG+TGG - tig0042464:6323-6342 Msa1462610:CDS 40.0%
!!! AGTGAAGACCCTTTTTGGTT+TGG - tig0042464:6944-6963 Msa1462610:intron 40.0%
ATAATTGCAGCTCAATTGCC+AGG - tig0042464:6985-7004 Msa1462610:intron 40.0%
CTTGTTGCTGCTGATCTTTA+CGG + tig0042464:7077-7096 Msa1462610:intergenic 40.0%
GCTCGTAATAGAGGCAATAA+TGG - tig0042464:7096-7115 Msa1462610:intron 40.0%
! CTTGATCATTGAAGCCTTGT+TGG + tig0042464:7281-7300 Msa1462610:intergenic 40.0%
! AAGCTTGGAGGAAGATTTTC+AGG - tig0042464:7324-7343 Msa1462610:intron 40.0%
TTGCGAATTGTACTTGGTTG+TGG + tig0042464:7485-7504 Msa1462610:intergenic 40.0%
! CCTTGGTATTTGGAATCAAG+AGG + tig0042464:7711-7730 Msa1462610:intergenic 40.0%
CCTCTTGATTCCAAATACCA+AGG - tig0042464:7708-7727 Msa1462610:five_prime_UTR 40.0%
!! GTTGGTGTCTTTCTGGGTTT+TGG + tig0042464:6219-6238 Msa0120190:intergenic 45.0%
AACCCAGAAAGACACCAACA+TGG - tig0042464:6220-6239 Msa1462610:CDS 45.0%
ACCCAGAAAGACACCAACAT+GGG - tig0042464:6221-6240 Msa1462610:CDS 45.0%
! ACCCATGTTGGTGTCTTTCT+GGG + tig0042464:6225-6244 Msa1462610:intergenic 45.0%
! TACCCATGTTGGTGTCTTTC+TGG + tig0042464:6226-6245 Msa1462610:intergenic 45.0%
CAAACGTGAAGAAAGGTCCA+TGG - tig0042464:6267-6286 Msa1462610:CDS 45.0%
!! AACATGGTACTGGTGGTAAC+TGG - tig0042464:6330-6349 Msa1462610:CDS 45.0%
!!! GTTTTAGGCTTGAAGCGTTG+TGG - tig0042464:6563-6582 Msa1462610:CDS 45.0%
CTTCGCCCTAATCTCAAACA+TGG - tig0042464:6617-6636 Msa1462610:CDS 45.0%
!! TGGTTTGGTATGAAAGCAGG+TGG - tig0042464:6959-6978 Msa1462610:intron 45.0%
CAGCAACAAGCTCGTAATAG+AGG - tig0042464:7087-7106 Msa1462610:intron 45.0%
AGCAAAGGTTGCATGACATG+TGG + tig0042464:7213-7232 Msa1462610:intergenic 45.0%
!! ACATTGATGGTAGTGGAGGT+GGG + tig0042464:7245-7264 Msa1462610:intergenic 45.0%
!! AACATTGATGGTAGTGGAGG+TGG + tig0042464:7246-7265 Msa1462610:intergenic 45.0%
!! GACAACATTGATGGTAGTGG+AGG + tig0042464:7249-7268 Msa1462610:intergenic 45.0%
! TCCACCAAGATTTGATGGGT+TGG - tig0042464:7587-7606 Msa1462610:CDS 45.0%
TCCAACCCATCAAATCTTGG+TGG + tig0042464:7591-7610 Msa1462610:intergenic 45.0%
!! GTTGGTGTCTTTCTGGGTTT+TGG + tig0042464:6219-6238 Msa1462610:intergenic 45.0%
AACCCAGAAAGACACCAACA+TGG - tig0042464:6220-6239 Msa1462610:CDS 45.0%
ACCCAGAAAGACACCAACAT+GGG - tig0042464:6221-6240 Msa1462610:CDS 45.0%
! ACCCATGTTGGTGTCTTTCT+GGG + tig0042464:6225-6244 Msa1462610:intergenic 45.0%
! TACCCATGTTGGTGTCTTTC+TGG + tig0042464:6226-6245 Msa1462610:intergenic 45.0%
CAAACGTGAAGAAAGGTCCA+TGG - tig0042464:6267-6286 Msa1462610:CDS 45.0%
!! AACATGGTACTGGTGGTAAC+TGG - tig0042464:6330-6349 Msa1462610:CDS 45.0%
!!! GTTTTAGGCTTGAAGCGTTG+TGG - tig0042464:6563-6582 Msa1462610:CDS 45.0%
CTTCGCCCTAATCTCAAACA+TGG - tig0042464:6617-6636 Msa1462610:CDS 45.0%
!! TGGTTTGGTATGAAAGCAGG+TGG - tig0042464:6959-6978 Msa1462610:intron 45.0%
CAGCAACAAGCTCGTAATAG+AGG - tig0042464:7087-7106 Msa1462610:intron 45.0%
AGCAAAGGTTGCATGACATG+TGG + tig0042464:7213-7232 Msa1462610:intergenic 45.0%
!! ACATTGATGGTAGTGGAGGT+GGG + tig0042464:7245-7264 Msa1462610:intergenic 45.0%
!! AACATTGATGGTAGTGGAGG+TGG + tig0042464:7246-7265 Msa1462610:intergenic 45.0%
!! GACAACATTGATGGTAGTGG+AGG + tig0042464:7249-7268 Msa1462610:intergenic 45.0%
! TCCACCAAGATTTGATGGGT+TGG - tig0042464:7587-7606 Msa1462610:CDS 45.0%
TCCAACCCATCAAATCTTGG+TGG + tig0042464:7591-7610 Msa1462610:intergenic 45.0%
ACAAGGAGCTCTACCCATGT+TGG + tig0042464:6237-6256 Msa1462610:intergenic 50.0%
! GCATCTTCTTCTGGAGACCA+TGG + tig0042464:6287-6306 Msa1462610:intergenic 50.0%
GTGGAAAGAGTTGTCGTCTC+CGG - tig0042464:6582-6601 Msa1462610:CDS 50.0%
GGCGAAGATAGTTTAGCCAC+CGG + tig0042464:6604-6623 Msa1462610:intergenic 50.0%
CGCCCTAATCTCAAACATGG+TGG - tig0042464:6620-6639 Msa1462610:CDS 50.0%
!! ATTGATGGTAGTGGAGGTGG+GGG + tig0042464:7243-7262 Msa1462610:intergenic 50.0%
!! CATTGATGGTAGTGGAGGTG+GGG + tig0042464:7244-7263 Msa1462610:intergenic 50.0%
ACAAGGAGCTCTACCCATGT+TGG + tig0042464:6237-6256 Msa1462610:intergenic 50.0%
! GCATCTTCTTCTGGAGACCA+TGG + tig0042464:6287-6306 Msa1462610:intergenic 50.0%
GTGGAAAGAGTTGTCGTCTC+CGG - tig0042464:6582-6601 Msa1462610:CDS 50.0%
GGCGAAGATAGTTTAGCCAC+CGG + tig0042464:6604-6623 Msa1462610:intergenic 50.0%
CGCCCTAATCTCAAACATGG+TGG - tig0042464:6620-6639 Msa1462610:CDS 50.0%
!! ATTGATGGTAGTGGAGGTGG+GGG + tig0042464:7243-7262 Msa1462610:intergenic 50.0%
!! CATTGATGGTAGTGGAGGTG+GGG + tig0042464:7244-7263 Msa1462610:intergenic 50.0%
GAAAGAGTTGTCGTCTCCGG+TGG - tig0042464:6585-6604 Msa1462610:CDS 55.0%
!! GGTGGGGGTGTTGATAGCAA+AGG + tig0042464:7228-7247 Msa1462610:intergenic 55.0%
!! GACTCGGTGCAAGAAGAGCA+AGG - tig0042464:7522-7541 Msa1462610:intron 55.0%
GAAAGAGTTGTCGTCTCCGG+TGG - tig0042464:6585-6604 Msa1462610:CDS 55.0%
!! GGTGGGGGTGTTGATAGCAA+AGG + tig0042464:7228-7247 Msa1462610:intergenic 55.0%
!! GACTCGGTGCAAGAAGAGCA+AGG - tig0042464:7522-7541 Msa1462610:intron 55.0%
Chromosome Type Strat End Strand Name
tig0042464 gene 6165 7734 6165 ID=Msa1462610;Name=Msa1462610
tig0042464 mRNA 6165 7734 6165 ID=Msa1462610-mRNA-1;Parent=Msa1462610;Name=Msa1462610-mRNA-1;_AED=0.02;_eAED=0.02;_QI=74|1|0.66|1|1|1|3|0|340
tig0042464 exon 6165 6921 6165 ID=Msa1462610-mRNA-1:exon:23741;Parent=Msa1462610-mRNA-1
tig0042464 exon 7200 7329 7200 ID=Msa1462610-mRNA-1:exon:23740;Parent=Msa1462610-mRNA-1
tig0042464 exon 7525 7734 7525 ID=Msa1462610-mRNA-1:exon:23739;Parent=Msa1462610-mRNA-1
tig0042464 five_prime_UTR 7661 7734 7661 ID=Msa1462610-mRNA-1:five_prime_utr;Parent=Msa1462610-mRNA-1
tig0042464 CDS 7525 7660 7525 ID=Msa1462610-mRNA-1:cds;Parent=Msa1462610-mRNA-1
tig0042464 CDS 7200 7329 7200 ID=Msa1462610-mRNA-1:cds;Parent=Msa1462610-mRNA-1
tig0042464 CDS 6165 6921 6165 ID=Msa1462610-mRNA-1:cds;Parent=Msa1462610-mRNA-1
Gene Sequence

>Msa1462610

ATGGGTAGAGCTCCTTGTTGTGACAAAGCAAACGTGAAGAAAGGTCCATGGTCTCCAGAAGAAGATGCTAAACTCAAATCTTACATAGAACAACATGGTACTGGTGGTAACTGGATTGCTCTTCCACAAAAAATTGGCTTGAAGCGTTGTGGAAAGAGTTGTCGTCTCCGGTGGCTAAACTATCTTCGCCCTAATCTCAAACATGGTGGTTTTTCCGAAGAAGAAGATAACATTATCTGCAGCCTTTACATTAGTATTGGAAGCAGGTGGTCGATAATTGCAGCTCAATTGCCAGGAAGAACTGATAATGACATAAAGAACTATTGGAATACAAGGTTGAAAAAGAAGCTTTTGGGGAAACACCGTAAAGATCAGCAGCAACAAGCTCGTAATAGAGGCAATAATGGTGTTATTATTAAGCAAGAAAGCAATAACAATAGAGTGATGAGTAGTAGTGAATTTTCCTTATCAAATTTGGTTCAAGAACAACCATATTTACCACATGTCATGCAACCTTTGCTATCAACACCCCCACCTCCACTACCATCAATGTTGTCATACACAAACCAACAAGGCTTCAATGATCAAGATTCTATTAGAAAACTTCTTATGAAGCTTGGAGGAAGATTTTCAGGTGATTATCATCCTAATACTACTTTTGATGGTTGTAATCTTCAATTTTCAAATGCTACTTCTTCAACTCATGAACAAGTTTATGATCAAGAACATGTGGGTTCTTCTACTTGTGTTAATTCTTCCAATGATAACAACCACAACCAAGTACAATTCGCAACAAATGGTCAATACTTTGACTCGGTGCAAGAAGAGCAAGGTAAATTCATTCCAGAAATTGATCATATGGTATCTACTAATTATCCACCAAGATTTGATGGGTTGGAATTCTTTTATGGTGAAGAAGACTTGAATATTGATAATAATAAGATACAAGGTTCTAGTATTAATTGGGGTGAAGCTACCACTTCAAGTTATCATCATCCTCTTGATTCCAAATACCAAGGTTAA
Protein sequence

>Msa1462610

MGRAPCCDKANVKKGPWSPEEDAKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNLKHGGFSEEEDNIICSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGKHRKDQQQQARNRGNNGVIIKQESNNNRVMSSSEFSLSNLVQEQPYLPHVMQPLLSTPPPPLPSMLSYTNQQGFNDQDSIRKLLMKLGGRFSGDYHPNTTFDGCNLQFSNATSSTHEQVYDQEHVGSSTCVNSSNDNNHNQVQFATNGQYFDSVQEEQGKFIPEIDHMVSTNYPPRFDGLEFFYGEEDLNIDNNKIQGSSINWGEATTSSYHHPLDSKYQG*