AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0017710

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0017710 MtrunA17_Chr1g0152011 95.601 341 14 1 1 340 1 341 0.0 679
Msa0017710 MtrunA17_Chr3g0135311 55.618 356 115 13 1 339 1 330 1.84e-115 338
Msa0017710 MtrunA17_Chr5g0400821 79.042 167 30 2 1 167 1 162 1.94e-90 273
Msa0017710 MtrunA17_Chr4g0054391 84.828 145 22 0 1 145 1 145 1.63e-80 247
Msa0017710 MtrunA17_Chr4g0072751 95.495 111 5 0 1 111 1 111 8.75e-76 237
Msa0017710 MtrunA17_Chr4g0028311 84.874 119 18 0 1 119 1 119 2.29e-74 232
Msa0017710 MtrunA17_Chr7g0264641 81.356 118 22 0 1 118 1 118 2.08e-72 225
Msa0017710 MtrunA17_Chr2g0327351 88.288 111 13 0 1 111 1 111 1.19e-71 225
Msa0017710 MtrunA17_Chr1g0151941 77.966 118 26 0 1 118 1 118 7.23e-68 213
Msa0017710 MtrunA17_Chr6g0487491 55.135 185 61 3 1 177 1 171 1.63e-61 197
Msa0017710 MtrunA17_Chr6g0452271 55.195 154 63 2 1 149 1 153 6.49e-55 182
Msa0017710 MtrunA17_Chr3g0103281 68.067 119 37 1 1 119 1 118 9.34e-54 179
Msa0017710 MtrunA17_Chr3g0115821 63.559 118 42 1 1 118 1 117 3.74e-51 173
Msa0017710 MtrunA17_Chr1g0167691 49.080 163 82 1 1 163 1 162 7.51e-51 169
Msa0017710 MtrunA17_Chr6g0453471 64.103 117 41 1 1 117 1 116 1.58e-50 172
Msa0017710 MtrunA17_Chr4g0039971 62.712 118 43 1 1 118 2 118 4.90e-50 170
Msa0017710 MtrunA17_Chr7g0217741 64.103 117 41 1 1 117 1 116 4.96e-50 169
Msa0017710 MtrunA17_Chr7g0217221 64.957 117 40 1 1 117 1 116 6.39e-50 167
Msa0017710 MtrunA17_Chr4g0037141 60.833 120 46 1 1 120 1 119 7.83e-50 168
Msa0017710 MtrunA17_Chr1g0187761 52.941 153 66 2 1 153 1 147 1.04e-49 166
Msa0017710 MtrunA17_Chr5g0410961 62.712 118 43 1 1 118 1 117 1.92e-49 168
Msa0017710 MtrunA17_Chr3g0131121 49.686 159 77 2 1 159 1 156 2.05e-49 167
Msa0017710 MtrunA17_Chr4g0042671 64.957 117 40 1 1 117 1 116 2.84e-49 169
Msa0017710 MtrunA17_Chr1g0203411 61.538 117 44 1 1 117 1 116 5.41e-49 166
Msa0017710 MtrunA17_Chr8g0346561 60.684 117 45 1 1 117 1 116 8.05e-49 166
Msa0017710 MtrunA17_Chr1g0167661 54.110 146 66 1 1 146 1 145 8.71e-49 164
Msa0017710 MtrunA17_Chr7g0275911 57.480 127 48 2 1 127 1 121 2.46e-48 163
Msa0017710 MtrunA17_Chr2g0323411 62.712 118 43 1 1 118 1 117 2.70e-48 165
Msa0017710 MtrunA17_Chr2g0281071 62.185 119 43 2 1 118 1 118 3.39e-48 165
Msa0017710 MtrunA17_Chr4g0048511 62.185 119 43 2 1 118 1 118 3.78e-48 166
Msa0017710 MtrunA17_Chr4g0060721 60.684 117 45 1 1 117 2 117 1.05e-47 164
Msa0017710 MtrunA17_Chr1g0193371 62.393 117 43 1 1 117 1 116 4.54e-47 163
Msa0017710 MtrunA17_Chr8g0385321 60.000 120 47 1 1 120 1 119 7.25e-47 161
Msa0017710 MtrunA17_Chr7g0261281 54.545 132 59 1 1 132 1 131 7.52e-47 160
Msa0017710 MtrunA17_Chr4g0058631 61.017 118 45 1 1 118 1 117 1.46e-46 161
Msa0017710 MtrunA17_Chr7g0274581 58.120 117 48 1 1 117 1 116 2.32e-46 156
Msa0017710 MtrunA17_Chr7g0254411 60.684 117 45 1 1 117 1 116 2.71e-46 160
Msa0017710 MtrunA17_Chr7g0270891 46.591 176 81 2 1 164 1 175 2.80e-46 160
Msa0017710 MtrunA17_Chr1g0193801 60.833 120 46 1 1 120 1 119 3.51e-46 161
Msa0017710 MtrunA17_Chr4g0070611 55.725 131 52 2 1 131 1 125 3.83e-46 159
Msa0017710 MtrunA17_Chr3g0092401 60.684 117 45 1 1 117 2 117 3.94e-46 159
Msa0017710 MtrunA17_Chr8g0349261 57.983 119 49 1 1 118 1 119 6.65e-46 158
Msa0017710 MtrunA17_Chr2g0323351 40.394 203 114 3 1 199 1 200 6.77e-46 156
Msa0017710 MtrunA17_Chr4g0070641 55.725 131 52 2 1 131 1 125 1.02e-45 153
Msa0017710 MtrunA17_Chr7g0228891 53.642 151 60 5 1 144 1 148 1.03e-45 157
Msa0017710 MtrunA17_Chr5g0395281 59.322 118 47 1 1 118 1 117 1.42e-45 157
Msa0017710 MtrunA17_Chr6g0453211 63.063 111 40 1 1 111 1 110 2.07e-45 157
Msa0017710 MtrunA17_Chr5g0435101 56.034 116 50 1 3 118 2 116 2.48e-45 154
Msa0017710 MtrunA17_Chr4g0057031 59.322 118 47 1 1 118 1 117 2.89e-45 155
Msa0017710 MtrunA17_Chr4g0068061 57.265 117 49 1 1 117 1 116 6.40e-45 156
Msa0017710 MtrunA17_Chr3g0117091 59.322 118 47 1 1 118 1 117 7.43e-45 157
Msa0017710 MtrunA17_Chr2g0311221 60.909 110 42 1 2 111 4 112 1.19e-44 155
Msa0017710 MtrunA17_Chr4g0022931 56.780 118 49 2 1 117 1 117 2.25e-44 153
Msa0017710 MtrunA17_Chr8g0387421 57.265 117 49 1 1 117 1 116 2.55e-44 154
Msa0017710 MtrunA17_Chr3g0110351 59.829 117 46 1 1 117 1 116 5.03e-44 153
Msa0017710 MtrunA17_Chr1g0211161 36.863 255 120 7 3 256 4 218 5.05e-44 151
Msa0017710 MtrunA17_Chr4g0022891 51.825 137 65 1 1 137 1 136 9.31e-44 150
Msa0017710 MtrunA17_Chr7g0271241 63.636 110 39 1 1 110 1 109 1.03e-43 154
Msa0017710 MtrunA17_Chr5g0434571 59.829 117 46 1 1 117 37 152 1.29e-43 154
Msa0017710 MtrunA17_Chr2g0330041 57.143 119 50 1 1 119 1 118 1.55e-43 154
Msa0017710 MtrunA17_Chr4g0022901 55.462 119 51 2 1 118 1 118 2.61e-43 150
Msa0017710 MtrunA17_Chr3g0121241 56.140 114 49 1 5 118 35 147 3.29e-43 151
Msa0017710 MtrunA17_Chr8g0342541 56.780 118 50 1 1 118 1 117 7.07e-43 151
Msa0017710 MtrunA17_Chr8g0342481 54.622 119 54 0 1 119 1 119 2.48e-42 151
Msa0017710 MtrunA17_Chr8g0342521 56.303 119 51 1 1 119 1 118 2.71e-42 150
Msa0017710 MtrunA17_Chr5g0397231 58.559 111 45 1 1 111 1 110 3.41e-42 149
Msa0017710 MtrunA17_Chr2g0309911 55.652 115 50 1 6 120 5 118 1.14e-41 147
Msa0017710 MtrunA17_Chr4g0022911 52.941 119 54 2 1 118 1 118 1.48e-41 146
Msa0017710 MtrunA17_Chr4g0044421 55.462 119 51 2 3 120 2 119 3.69e-41 142
Msa0017710 MtrunA17_Chr1g0194951 54.701 117 52 1 1 117 1 116 4.85e-41 147
Msa0017710 MtrunA17_Chr4g0022881 56.522 115 49 1 1 115 1 114 1.97e-40 142
Msa0017710 MtrunA17_Chr7g0269831 58.120 117 48 1 1 117 1 116 3.58e-39 142
Msa0017710 MtrunA17_Chr3g0099131 58.879 107 43 1 10 116 39 144 6.55e-39 144
Msa0017710 MtrunA17_Chr3g0080861 40.278 216 89 7 12 194 37 245 7.53e-39 144
Msa0017710 MtrunA17_Chr5g0417821 57.009 107 45 1 12 118 7 112 7.89e-39 139
Msa0017710 MtrunA17_Chr1g0203441 51.938 129 60 2 1 128 1 128 4.60e-38 137
Msa0017710 MtrunA17_Chr2g0328771 56.604 106 45 1 12 117 20 124 1.15e-37 137
Msa0017710 MtrunA17_Chr8g0354661 57.143 105 44 1 12 116 37 140 1.38e-37 141
Msa0017710 MtrunA17_Chr3g0088461 56.364 110 47 1 8 117 18 126 2.34e-37 137
Msa0017710 MtrunA17_Chr6g0470971 56.637 113 48 1 4 116 6 117 2.94e-37 135
Msa0017710 MtrunA17_Chr4g0032401 40.331 181 81 4 12 184 17 178 3.33e-37 136
Msa0017710 MtrunA17_Chr4g0055981 41.667 168 87 3 9 166 52 218 4.26e-37 133
Msa0017710 MtrunA17_Chr5g0434931 54.128 109 49 1 12 120 35 142 9.01e-37 134
Msa0017710 MtrunA17_Chr8g0343831 55.556 117 47 2 1 117 1 112 1.18e-36 132
Msa0017710 MtrunA17_Chr7g0228231 40.722 194 108 4 11 203 13 200 1.93e-36 130
Msa0017710 MtrunA17_Chr5g0434911 51.754 114 54 1 7 120 16 128 4.27e-36 131
Msa0017710 MtrunA17_Chr1g0168661 53.333 120 53 2 13 132 22 138 6.06e-36 130
Msa0017710 MtrunA17_Chr1g0186061 52.500 120 54 2 13 132 21 137 6.10e-36 130
Msa0017710 MtrunA17_Chr7g0240821 46.497 157 70 4 16 159 5 160 1.21e-35 129
Msa0017710 MtrunA17_Chr7g0220341 48.837 129 63 2 12 138 25 152 1.22e-35 130
Msa0017710 MtrunA17_Chr6g0450101 52.101 119 54 2 1 117 1 118 1.23e-35 128
Msa0017710 MtrunA17_Chr1g0194301 55.046 109 48 1 8 116 29 136 2.77e-35 129
Msa0017710 MtrunA17_Chr2g0322521 57.407 108 45 1 9 116 26 132 4.32e-35 132
Msa0017710 MtrunA17_Chr5g0440781 55.140 107 46 2 10 115 10 115 5.47e-35 126
Msa0017710 MtrunA17_Chr7g0228991 53.211 109 50 1 12 120 29 136 1.72e-34 127
Msa0017710 MtrunA17_Chr1g0180391 35.683 227 108 6 10 221 17 220 3.40e-34 125
Msa0017710 MtrunA17_Chr5g0440761 55.140 107 46 2 10 115 10 115 3.87e-34 126
Msa0017710 MtrunA17_Chr5g0441141 55.140 107 46 2 10 115 10 115 4.30e-34 126
Msa0017710 MtrunA17_Chr1g0209661 54.286 105 47 1 12 116 27 130 4.42e-34 127
Msa0017710 MtrunA17_Chr1g0192411 52.294 109 51 1 8 116 8 115 1.30e-33 128
Msa0017710 MtrunA17_Chr1g0194291 54.128 109 49 1 8 116 17 124 1.44e-33 124
Msa0017710 MtrunA17_Chr8g0360111 55.882 102 44 1 12 113 25 125 5.49e-33 123
Msa0017710 MtrunA17_Chr5g0434831 51.402 107 51 1 12 118 7 112 9.30e-33 120
Msa0017710 MtrunA17_Chr5g0434841 50.459 109 53 1 12 120 20 127 1.36e-32 123
Msa0017710 MtrunA17_Chr1g0154031 51.429 105 50 1 12 116 76 179 1.46e-32 125
Msa0017710 MtrunA17_Chr5g0441131 53.271 107 48 2 10 115 7 112 3.00e-32 119
Msa0017710 MtrunA17_Chr4g0042611 58.427 89 36 1 1 89 1 88 3.31e-32 115
Msa0017710 MtrunA17_Chr4g0068921 53.704 108 49 1 8 115 20 126 2.01e-31 117
Msa0017710 MtrunA17_Chr2g0293911 53.704 108 49 1 8 115 20 126 2.24e-30 117
Msa0017710 MtrunA17_Chr2g0327821 49.550 111 55 1 12 122 6 115 3.81e-30 115
Msa0017710 MtrunA17_Chr3g0099141 56.818 88 37 1 8 95 36 122 1.76e-29 110
Msa0017710 MtrunA17_Chr2g0294811 53.763 93 42 1 1 93 1 92 4.44e-29 108
Msa0017710 MtrunA17_Chr7g0247131 63.889 72 26 0 46 117 11 82 8.54e-29 112
Msa0017710 MtrunA17_Chr4g0008551 41.549 142 80 3 14 154 38 177 1.52e-28 113
Msa0017710 MtrunA17_Chr8g0334881 48.624 109 54 2 8 115 6 113 1.84e-28 112
Msa0017710 MtrunA17_Chr4g0053431 46.721 122 60 3 14 132 5 124 4.58e-28 110
Msa0017710 MtrunA17_Chr5g0401731 50.485 103 49 2 14 116 15 115 8.42e-28 110
Msa0017710 MtrunA17_Chr8g0342461 53.333 90 42 0 1 90 1 90 9.57e-28 105
Msa0017710 MtrunA17_Chr8g0342471 53.333 90 42 0 1 90 1 90 2.78e-27 104
Msa0017710 MtrunA17_Chr8g0342511 55.172 87 38 1 1 87 1 86 3.28e-27 102
Msa0017710 MtrunA17_Chr4g0030881 46.847 111 51 2 13 116 8 117 3.42e-27 107
Msa0017710 MtrunA17_Chr4g0013361 47.706 109 55 2 8 115 6 113 3.43e-27 108
Msa0017710 MtrunA17_Chr3g0133601 48.624 109 54 2 8 116 31 137 4.23e-27 106
Msa0017710 MtrunA17_Chr8g0342531 53.333 90 41 1 1 90 1 89 5.67e-27 104
Msa0017710 MtrunA17_Chr6g0454921 49.515 103 50 2 14 116 15 115 1.71e-26 104
Msa0017710 MtrunA17_Chr5g0395221 51.685 89 42 1 1 89 1 88 1.24e-25 98.6
Msa0017710 MtrunA17_Chr2g0323321 48.387 93 46 2 1 93 1 91 2.11e-25 98.6
Msa0017710 MtrunA17_Chr5g0434901 61.429 70 27 0 45 114 5 74 9.58e-25 97.1
Msa0017710 MtrunA17_Chr3g0093811 55.422 83 34 1 38 117 4 86 1.20e-23 98.2
Msa0017710 MtrunA17_Chr5g0429661 40.000 120 68 3 14 133 122 237 1.75e-23 99.4
Msa0017710 MtrunA17_Chr7g0229131 46.512 86 46 0 46 131 5 90 1.93e-22 92.4
Msa0017710 MtrunA17_Chr7g0229101 57.971 69 29 0 46 114 5 73 2.76e-22 93.2
Msa0017710 MtrunA17_Chr4g0042501 33.533 167 90 5 14 180 105 250 2.87e-22 97.1
Msa0017710 MtrunA17_Chr6g0480581 41.176 102 58 2 14 115 4 103 4.73e-22 93.2
Msa0017710 MtrunA17_Chr3g0117511 37.594 133 74 3 9 141 178 301 1.34e-21 95.1
Msa0017710 MtrunA17_Chr4g0058991 36.842 133 75 3 9 141 204 327 1.43e-21 95.1
Msa0017710 MtrunA17_Chr5g0425591 50.575 87 41 2 11 96 8 93 1.98e-21 87.4
Msa0017710 MtrunA17_Chr5g0417621 36.641 131 77 3 14 144 134 258 3.65e-21 94.0
Msa0017710 MtrunA17_Chr6g0460661 41.667 108 58 3 14 118 16 121 4.34e-21 88.6
Msa0017710 MtrunA17_Chr5g0437321 45.000 100 53 2 14 113 19 116 1.57e-20 90.1
Msa0017710 MtrunA17_Chr7g0238651 33.696 184 98 7 17 189 10 180 1.99e-19 88.2
Msa0017710 MtrunA17_Chr3g0125801 40.367 109 63 2 8 116 10 116 2.15e-19 87.0
Msa0017710 MtrunA17_Chr6g0453751 45.161 93 43 3 12 96 20 112 4.04e-19 82.4
Msa0017710 MtrunA17_Chr7g0238631 44.860 107 51 3 14 117 113 214 4.42e-19 88.2
Msa0017710 MtrunA17_Chr6g0460671 41.748 103 58 2 14 116 99 199 7.32e-19 86.3
Msa0017710 MtrunA17_Chr3g0139671 40.385 104 60 2 14 117 85 186 2.31e-18 86.3
Msa0017710 MtrunA17_Chr7g0254261 39.496 119 65 3 14 132 89 200 3.18e-18 84.7
Msa0017710 MtrunA17_Chr7g0228531 36.290 124 67 4 11 134 217 328 5.48e-18 84.3
Msa0017710 MtrunA17_Chr7g0228401 31.944 144 71 4 11 130 252 392 1.42e-17 83.6
Msa0017710 MtrunA17_Chr1g0157731 37.903 124 72 3 14 134 91 212 1.66e-17 84.0
Msa0017710 MtrunA17_Chr1g0157731 35.644 101 62 3 14 113 39 137 6.27e-11 63.9
Msa0017710 MtrunA17_Chr5g0416341 34.641 153 88 4 17 169 29 169 5.11e-17 81.6
Msa0017710 MtrunA17_Chr5g0397841 42.000 100 56 2 11 110 107 204 8.91e-17 81.3
Msa0017710 MtrunA17_Chr8g0362231 41.000 100 57 2 17 116 25 122 4.54e-16 79.0
Msa0017710 MtrunA17_Chr1g0177901 44.872 78 43 0 34 111 12 89 1.43e-15 74.7
Msa0017710 MtrunA17_Chr7g0233061 35.433 127 70 5 10 136 176 290 3.04e-15 75.9
Msa0017710 MtrunA17_Chr1g0193901 55.932 59 24 2 12 69 11 68 1.34e-14 69.3
Msa0017710 MtrunA17_Chr1g0193891 55.932 59 24 2 12 69 11 68 1.34e-14 69.3
Msa0017710 MtrunA17_Chr1g0193871 55.932 59 24 2 12 69 11 68 1.34e-14 69.3
Msa0017710 MtrunA17_Chr1g0193881 55.932 59 24 2 12 69 11 68 1.34e-14 69.3
Msa0017710 MtrunA17_Chr7g0228481 35.484 124 68 5 11 134 217 328 2.12e-14 73.9
Msa0017710 MtrunA17_Chr7g0247141 53.191 47 22 0 1 47 1 47 1.41e-13 65.1
Msa0017710 MtrunA17_Chr5g0434871 54.545 44 20 0 75 118 2 45 1.55e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0017710 AT3G49690.1 62.621 206 65 3 1 205 1 195 7.54e-84 256
Msa0017710 AT5G65790.1 73.054 167 42 2 1 165 1 166 2.04e-82 255
Msa0017710 AT5G57620.1 86.047 129 18 0 1 129 1 129 4.09e-80 248
Msa0017710 AT4G37780.1 84.375 128 20 0 1 128 1 128 3.21e-77 239
Msa0017710 AT2G36890.1 83.193 119 20 0 1 119 1 119 1.79e-71 224
Msa0017710 AT2G36890.2 83.193 119 20 0 1 119 42 160 1.91e-71 226
Msa0017710 AT5G23000.1 79.661 118 24 0 1 118 1 118 1.00e-67 216
Msa0017710 AT5G56110.1 69.748 119 35 1 1 119 1 118 1.12e-55 184
Msa0017710 AT3G01140.2 64.407 118 41 1 1 118 1 117 7.68e-52 175
Msa0017710 AT5G15310.4 63.559 118 42 1 1 118 1 117 2.66e-51 171
Msa0017710 AT5G61420.2 43.810 210 106 2 1 210 1 198 3.90e-51 174
Msa0017710 AT5G15310.1 63.559 118 42 1 1 118 1 117 7.76e-51 172
Msa0017710 AT5G15310.2 63.559 118 42 1 1 118 1 117 9.02e-51 171
Msa0017710 AT1G22640.1 48.780 164 79 2 1 164 1 159 5.24e-50 167
Msa0017710 AT3G02940.2 61.017 118 45 1 1 118 1 117 7.10e-50 169
Msa0017710 AT5G16770.4 62.712 118 43 1 1 118 1 117 7.30e-50 169
Msa0017710 AT5G16770.3 62.712 118 43 1 1 118 1 117 7.30e-50 169
Msa0017710 AT3G02940.1 61.017 118 45 1 1 118 1 117 1.63e-49 168
Msa0017710 AT3G02940.3 61.017 118 45 1 1 118 1 117 1.63e-49 168
Msa0017710 AT2G16720.1 60.833 120 46 1 1 120 1 119 1.69e-49 167
Msa0017710 AT4G38620.1 55.556 135 53 2 1 129 1 134 1.87e-49 167
Msa0017710 AT5G16770.1 62.712 118 43 1 1 118 1 117 1.88e-49 169
Msa0017710 AT5G16770.2 62.712 118 43 1 1 118 1 117 1.88e-49 169
Msa0017710 AT3G23250.1 62.393 117 43 1 1 117 1 116 2.09e-49 167
Msa0017710 AT3G47600.1 54.194 155 65 2 1 155 1 149 2.51e-49 168
Msa0017710 AT4G05100.1 63.866 119 41 2 1 118 1 118 2.66e-49 168
Msa0017710 AT4G28110.1 62.712 118 43 1 1 118 1 117 2.66e-49 167
Msa0017710 AT3G28470.1 54.037 161 64 3 1 152 1 160 2.66e-49 167
Msa0017710 AT4G21440.1 61.864 118 44 1 1 118 1 117 2.75e-49 169
Msa0017710 AT4G09460.1 61.017 118 45 1 1 118 1 117 6.89e-49 164
Msa0017710 AT3G01140.1 62.712 118 43 1 1 118 44 160 1.08e-48 168
Msa0017710 AT1G35515.1 59.167 120 48 1 1 120 1 119 1.25e-48 162
Msa0017710 AT4G34990.1 61.667 120 45 1 1 120 1 119 1.32e-48 164
Msa0017710 AT5G62470.2 63.248 117 42 1 1 117 1 116 1.71e-48 166
Msa0017710 AT1G08810.1 49.689 161 79 2 1 161 1 159 1.89e-48 164
Msa0017710 AT1G79180.1 63.793 116 41 1 2 117 4 118 2.50e-48 164
Msa0017710 AT2G31180.1 50.909 165 73 3 1 158 1 164 3.57e-48 162
Msa0017710 AT1G74650.1 62.712 118 43 1 1 118 1 117 4.94e-48 165
Msa0017710 AT3G61250.1 60.169 118 46 1 1 118 1 117 6.83e-48 163
Msa0017710 AT1G16490.1 51.899 158 72 2 2 159 4 157 1.04e-47 162
Msa0017710 AT5G07690.1 62.500 120 44 1 1 120 1 119 1.07e-47 164
Msa0017710 AT3G28910.1 63.248 117 42 1 1 117 1 116 1.55e-47 163
Msa0017710 AT5G65230.1 61.017 118 45 1 1 118 1 117 1.91e-47 162
Msa0017710 AT5G60890.1 61.538 117 44 1 1 117 1 116 2.30e-47 162
Msa0017710 AT1G34670.1 61.864 118 44 1 1 118 1 117 2.56e-47 164
Msa0017710 AT4G01680.3 62.393 117 43 1 1 117 1 116 3.08e-47 160
Msa0017710 AT4G17785.2 61.345 119 44 2 1 118 1 118 6.26e-47 162
Msa0017710 AT1G06180.1 59.375 128 49 2 1 128 1 125 7.03e-47 159
Msa0017710 AT3G62610.1 57.724 123 51 1 1 123 1 122 8.63e-47 162
Msa0017710 AT5G10280.1 59.322 118 47 1 1 118 1 117 8.95e-47 161
Msa0017710 AT4G17785.1 61.345 119 44 2 1 118 1 118 9.10e-47 162
Msa0017710 AT5G26660.1 60.000 120 47 1 1 120 1 119 1.08e-46 162
Msa0017710 AT4G01680.1 62.393 117 43 1 1 117 1 116 1.24e-46 161
Msa0017710 AT1G57560.1 60.833 120 46 1 1 120 1 119 1.44e-46 160
Msa0017710 AT5G62470.1 63.248 117 41 2 1 117 1 115 1.68e-46 161
Msa0017710 AT1G56160.1 60.345 116 45 1 2 117 4 118 1.92e-46 159
Msa0017710 AT1G57560.2 60.833 120 46 1 1 120 1 119 2.29e-46 159
Msa0017710 AT4G12350.1 61.864 118 44 1 1 118 1 117 3.34e-46 159
Msa0017710 AT1G18570.1 61.157 121 45 2 1 120 1 120 5.61e-46 160
Msa0017710 AT4G22680.1 60.169 118 46 1 1 118 1 117 3.25e-45 155
Msa0017710 AT1G09540.1 60.684 117 45 1 1 117 1 116 4.36e-45 158
Msa0017710 AT1G63910.1 55.469 128 56 1 1 128 1 127 4.47e-45 158
Msa0017710 AT3G13540.1 57.391 115 48 1 4 118 15 128 1.05e-44 154
Msa0017710 AT3G12820.1 58.475 118 48 1 3 120 5 121 2.06e-44 152
Msa0017710 AT5G62320.1 51.429 140 56 2 2 129 3 142 2.38e-44 152
Msa0017710 AT5G07700.1 59.322 118 47 1 1 118 1 117 2.96e-44 155
Msa0017710 AT5G07700.2 59.322 118 47 1 1 118 1 117 2.96e-44 155
Msa0017710 AT2G47460.1 54.688 128 57 1 1 128 1 127 3.78e-44 155
Msa0017710 AT5G54230.1 60.169 118 46 1 1 118 1 117 5.71e-44 154
Msa0017710 AT5G16600.1 52.778 144 55 2 1 132 1 143 1.48e-43 153
Msa0017710 AT5G49330.1 57.265 117 49 1 1 117 1 116 1.97e-43 153
Msa0017710 AT4G01680.2 56.589 129 43 2 1 117 1 128 1.97e-43 153
Msa0017710 AT1G74080.1 56.667 120 51 1 1 120 1 119 2.31e-43 152
Msa0017710 AT3G13890.2 56.303 119 51 1 1 119 1 118 3.21e-43 153
Msa0017710 AT1G66230.1 58.974 117 47 1 1 117 1 116 7.84e-43 150
Msa0017710 AT5G14750.1 47.799 159 75 2 13 171 17 167 1.12e-42 147
Msa0017710 AT3G12720.1 56.522 115 49 1 6 120 16 129 5.43e-42 148
Msa0017710 AT5G14340.1 55.556 117 51 1 1 117 13 128 6.25e-42 147
Msa0017710 AT1G79180.2 49.664 149 41 2 2 117 4 151 1.39e-41 148
Msa0017710 AT3G13890.1 52.344 128 51 2 1 119 1 127 3.17e-40 145
Msa0017710 AT5G52600.1 59.259 108 43 1 9 116 9 115 1.08e-39 139
Msa0017710 AT1G74430.1 54.167 120 54 1 1 120 1 119 1.79e-39 140
Msa0017710 AT3G27920.1 56.881 109 46 1 13 121 15 122 1.84e-39 139
Msa0017710 AT5G40330.1 56.364 110 46 2 13 121 13 121 2.01e-38 136
Msa0017710 AT2G32460.2 58.095 105 43 1 12 116 6 109 3.86e-38 142
Msa0017710 AT2G32460.1 58.095 105 43 1 12 116 18 121 4.03e-38 142
Msa0017710 AT5G06100.1 57.798 109 45 1 8 116 28 135 7.73e-38 140
Msa0017710 AT5G55020.1 57.547 106 44 1 12 117 26 130 1.20e-37 141
Msa0017710 AT5G12870.1 57.547 106 44 1 12 117 18 122 1.60e-37 136
Msa0017710 AT5G06100.5 57.798 109 45 1 8 116 28 135 2.68e-37 140
Msa0017710 AT5G06100.2 57.798 109 45 1 8 116 28 135 2.68e-37 140
Msa0017710 AT5G06100.3 57.798 109 45 1 8 116 28 135 2.68e-37 140
Msa0017710 AT5G06100.4 57.798 109 45 1 8 116 28 135 2.68e-37 140
Msa0017710 AT4G26930.1 56.731 104 44 1 12 115 19 121 2.93e-37 138
Msa0017710 AT1G18710.1 51.282 117 56 1 1 117 1 116 3.36e-37 134
Msa0017710 AT5G35550.1 41.143 175 87 4 9 181 11 171 5.21e-37 134
Msa0017710 AT3G11440.2 53.704 108 49 1 9 116 38 144 7.64e-37 138
Msa0017710 AT3G27810.1 55.963 109 47 1 9 117 17 124 2.27e-36 131
Msa0017710 AT3G11440.3 53.704 108 49 1 9 116 38 144 3.35e-36 137
Msa0017710 AT3G11440.4 53.704 108 49 1 9 116 38 144 3.35e-36 137
Msa0017710 AT3G11440.1 53.704 108 49 1 9 116 38 144 3.35e-36 137
Msa0017710 AT3G01530.1 51.818 110 52 1 8 117 21 129 1.37e-35 129
Msa0017710 AT3G08500.1 55.455 110 48 1 8 117 26 134 1.40e-35 132
Msa0017710 AT5G40350.1 54.128 109 49 1 10 118 15 122 2.48e-35 128
Msa0017710 AT1G48000.1 57.798 109 43 2 12 118 32 139 5.99e-35 128
Msa0017710 AT4G25560.1 57.547 106 44 1 13 118 11 115 6.67e-35 129
Msa0017710 AT2G26960.1 53.271 107 49 1 9 115 17 122 9.00e-35 132
Msa0017710 AT5G52260.1 59.091 110 44 1 9 118 9 117 1.70e-34 127
Msa0017710 AT3G48920.1 50.000 122 59 2 9 129 15 135 1.79e-34 127
Msa0017710 AT3G24310.1 51.667 120 55 2 13 132 19 135 1.17e-33 125
Msa0017710 AT4G13480.1 56.731 104 44 1 13 116 7 109 1.92e-33 124
Msa0017710 AT1G66370.1 49.138 116 54 2 1 116 1 111 4.80e-33 123
Msa0017710 AT2G47190.1 50.862 116 54 2 8 123 16 128 6.65e-33 123
Msa0017710 AT3G30210.1 41.447 152 82 2 13 158 28 178 7.12e-33 123
Msa0017710 AT1G25340.1 54.206 107 48 1 10 116 16 121 1.35e-32 123
Msa0017710 AT5G14750.3 46.617 133 61 2 39 171 11 133 4.32e-32 118
Msa0017710 AT1G66380.1 53.333 105 48 1 12 116 8 111 1.40e-31 116
Msa0017710 AT1G68320.1 51.429 105 50 1 12 116 19 122 9.58e-31 118
Msa0017710 AT5G26660.2 60.976 82 32 0 39 120 7 88 1.01e-30 119
Msa0017710 AT1G66390.1 52.381 105 49 1 12 116 8 111 1.60e-30 116
Msa0017710 AT1G56650.1 52.381 105 49 1 12 116 8 111 2.71e-30 115
Msa0017710 AT3G06490.1 54.630 108 48 1 8 115 15 121 3.00e-30 117
Msa0017710 AT2G26950.1 35.938 192 99 4 9 177 13 203 6.92e-30 117
Msa0017710 AT5G49620.1 53.704 108 49 1 8 115 22 128 8.06e-30 116
Msa0017710 AT3G53200.1 53.333 105 48 1 12 116 9 112 2.00e-29 113
Msa0017710 AT5G59780.3 47.273 110 57 1 13 122 9 117 1.52e-28 110
Msa0017710 AT3G46130.1 47.273 110 57 1 13 122 10 118 1.97e-28 111
Msa0017710 AT1G25340.2 51.402 107 46 2 10 116 16 116 5.10e-28 110
Msa0017710 AT3G60460.1 48.148 108 54 2 9 115 8 114 6.22e-28 110
Msa0017710 AT1G25340.3 51.402 107 46 2 10 116 16 116 7.69e-28 110
Msa0017710 AT2G23290.1 47.154 123 63 2 14 136 13 133 1.24e-27 110
Msa0017710 AT5G35550.2 48.598 107 53 1 39 143 43 149 1.71e-27 108
Msa0017710 AT3G47600.2 50.450 111 50 1 45 155 38 143 6.64e-27 108
Msa0017710 AT5G49620.2 47.200 125 45 3 8 115 22 142 1.55e-26 107
Msa0017710 AT3G27810.2 61.644 73 28 0 45 117 3 75 3.08e-26 103
Msa0017710 AT3G50060.1 48.182 110 55 2 10 119 2 109 4.68e-26 105
Msa0017710 AT5G67300.1 47.368 114 57 3 10 122 2 113 5.03e-26 105
Msa0017710 AT3G12820.2 61.111 72 28 0 49 120 2 73 6.00e-26 102
Msa0017710 AT4G37260.1 49.515 103 50 2 14 116 13 113 9.84e-26 105
Msa0017710 AT3G53200.2 63.014 73 27 0 44 116 7 79 2.61e-25 101
Msa0017710 AT3G09230.1 39.041 146 80 4 14 158 55 192 3.36e-25 105
Msa0017710 AT5G40350.2 58.108 74 31 0 45 118 4 77 3.86e-25 100
Msa0017710 AT1G18960.1 44.231 104 54 2 14 117 10 109 6.74e-25 102
Msa0017710 AT3G27785.1 41.176 136 68 3 9 144 184 307 7.32e-25 104
Msa0017710 AT5G59780.2 55.696 79 35 0 44 122 18 96 2.18e-24 99.4
Msa0017710 AT5G58850.1 42.609 115 63 3 11 124 102 214 2.40e-24 103
Msa0017710 AT3G46130.4 55.696 79 35 0 44 122 18 96 3.62e-24 99.4
Msa0017710 AT1G66380.3 61.111 72 28 0 45 116 7 78 4.25e-24 95.1
Msa0017710 AT3G55730.1 50.485 103 49 2 14 116 56 156 7.92e-24 101
Msa0017710 AT2G39880.1 49.515 103 50 2 14 116 50 150 8.46e-24 100
Msa0017710 AT1G17950.1 40.800 125 68 4 14 138 5 123 1.55e-23 97.8
Msa0017710 AT3G46130.3 55.844 77 34 0 46 122 10 86 1.74e-23 97.1
Msa0017710 AT5G40360.1 35.616 146 92 2 12 157 156 299 2.51e-23 99.4
Msa0017710 AT1G69560.1 41.284 109 62 2 9 117 102 208 1.19e-22 97.1
Msa0017710 AT1G69560.2 41.284 109 62 2 9 117 118 224 1.65e-22 97.1
Msa0017710 AT2G25230.1 45.631 103 54 2 9 111 21 121 1.73e-22 94.7
Msa0017710 AT5G17800.1 39.823 113 66 2 14 126 93 203 5.22e-22 95.1
Msa0017710 AT5G14750.4 43.363 113 57 1 59 171 1 106 8.88e-22 90.1
Msa0017710 AT5G14750.2 43.363 113 57 1 59 171 1 106 8.88e-22 90.1
Msa0017710 AT1G22640.3 42.453 106 57 1 59 164 1 102 9.35e-22 91.7
Msa0017710 AT4G18770.1 41.284 109 62 2 9 117 212 318 1.07e-21 95.5
Msa0017710 AT3G09370.2 38.298 141 82 3 14 151 135 273 9.61e-21 93.6
Msa0017710 AT3G09370.3 38.298 141 82 3 14 151 143 281 9.75e-21 93.6
Msa0017710 AT3G09370.1 38.298 141 82 3 14 151 130 268 1.05e-20 93.2
Msa0017710 AT1G26780.1 40.777 103 59 2 14 116 98 198 1.33e-20 90.5
Msa0017710 AT1G73410.1 45.631 103 54 2 14 116 6 106 1.44e-20 89.7
Msa0017710 AT5G11050.1 30.256 195 119 6 11 203 102 281 2.03e-20 92.0
Msa0017710 AT1G26780.2 40.777 103 59 2 14 116 98 198 2.48e-20 90.9
Msa0017710 AT1G73410.2 45.631 103 54 2 14 116 6 106 3.02e-20 87.8
Msa0017710 AT5G02320.3 41.346 104 59 2 14 117 67 168 1.35e-19 90.1
Msa0017710 AT5G02320.3 34.653 101 63 3 14 113 15 113 5.14e-11 63.9
Msa0017710 AT5G02320.1 41.346 104 59 2 14 117 127 228 1.36e-19 90.1
Msa0017710 AT5G02320.1 34.653 101 63 3 14 113 75 173 5.07e-11 64.3
Msa0017710 AT5G02320.2 41.346 104 59 2 14 117 127 228 1.36e-19 90.1
Msa0017710 AT5G02320.2 34.653 101 63 3 14 113 75 173 5.07e-11 64.3
Msa0017710 AT4G33450.1 39.815 108 63 2 9 116 14 119 3.00e-19 86.3
Msa0017710 AT1G71030.2 52.239 67 32 0 52 118 5 71 5.54e-19 83.6
Msa0017710 AT1G71030.1 52.239 67 32 0 52 118 19 85 6.42e-19 84.0
Msa0017710 AT3G23250.2 59.322 59 24 0 59 117 1 59 1.26e-18 84.0
Msa0017710 AT2G02820.3 42.857 105 56 3 17 121 33 133 4.99e-18 84.0
Msa0017710 AT5G40430.1 39.806 103 59 2 9 111 49 148 5.70e-18 82.8
Msa0017710 AT2G02820.1 42.857 105 56 3 17 121 33 133 7.09e-18 84.7
Msa0017710 AT2G02820.2 41.905 105 57 3 17 121 33 133 8.70e-18 84.7
Msa0017710 AT4G32730.5 39.423 104 61 2 14 117 87 188 1.52e-17 84.3
Msa0017710 AT4G32730.4 39.423 104 61 2 14 117 87 188 1.52e-17 84.3
Msa0017710 AT4G32730.3 39.423 104 61 2 14 117 87 188 1.52e-17 84.3
Msa0017710 AT4G32730.2 39.423 104 61 2 14 117 87 188 1.52e-17 84.3
Msa0017710 AT4G32730.1 39.423 104 61 2 14 117 87 188 1.65e-17 84.3
Msa0017710 AT1G14350.2 42.857 105 56 3 17 121 28 128 1.66e-17 83.6
Msa0017710 AT1G14350.1 42.857 105 56 3 17 121 28 128 1.66e-17 83.6
Msa0017710 AT3G29020.1 35.577 104 65 2 14 117 65 166 3.84e-17 79.7
Msa0017710 AT5G11510.5 38.462 104 62 2 14 117 81 182 3.93e-17 83.2
Msa0017710 AT5G11510.3 38.462 104 62 2 14 117 81 182 4.04e-17 83.2
Msa0017710 AT5G11510.1 38.462 104 62 2 14 117 81 182 4.04e-17 83.2
Msa0017710 AT5G11510.4 38.462 104 62 2 14 117 81 182 4.04e-17 83.2
Msa0017710 AT2G37630.1 34.307 137 77 3 17 151 7 132 4.39e-17 81.6
Msa0017710 AT3G29020.2 35.577 104 65 2 14 117 67 168 4.44e-17 80.9
Msa0017710 AT5G11510.2 38.462 104 62 2 14 117 81 182 4.66e-17 82.8
Msa0017710 AT1G66380.2 43.902 82 45 1 12 93 8 88 7.77e-17 75.9
Msa0017710 AT4G00540.2 35.780 109 67 2 11 117 100 207 8.81e-15 75.1
Msa0017710 AT4G00540.1 35.780 109 67 2 11 117 98 205 1.29e-14 74.7
Msa0017710 AT5G39700.1 34.653 101 64 2 15 115 57 155 1.20e-12 66.2
Msa0017710 AT5G61420.1 32.558 129 76 1 82 210 2 119 3.51e-12 66.6
Msa0017710 AT3G18100.1 31.169 154 95 4 12 162 544 689 2.60e-11 65.5
Msa0017710 AT3G18100.4 31.169 154 95 4 12 162 383 528 3.29e-11 65.1
Msa0017710 AT3G18100.3 31.169 154 95 4 12 162 496 641 3.46e-11 65.1
Msa0017710 AT3G18100.2 31.169 154 95 4 12 162 331 476 4.04e-11 64.7

Find 71 sgRNAs with CRISPR-Local

Find 204 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACCCATGTTGGTGTCTTTC+TGG 0.019822 1_1:-29570693 None:intergenic
CACAATTTAACCTTGGTATT+TGG 0.131923 1_1:-29572189 None:intergenic
TACAAGGTTCTAGTATTAAT+TGG 0.175164 1_1:+29572126 Msa0017710:CDS
GTTGGTGTCTTTCTGGGTTT+TGG 0.264251 1_1:-29570686 None:intergenic
TTGAGTTTAGCATCTTCTTC+TGG 0.285093 1_1:-29570763 None:intergenic
ACCCATGTTGGTGTCTTTCT+GGG 0.297929 1_1:-29570692 None:intergenic
CTTGATCATTGAAGCCTTGT+TGG 0.313961 1_1:-29571749 None:intergenic
AACCACCATGTTTGAGATTA+GGG 0.322373 1_1:-29571093 None:intergenic
CAACCATCAAAAGTAGTATT+AGG 0.326180 1_1:-29571828 None:intergenic
CTTGTTGCTGCTGATCTTTA+CGG 0.335855 1_1:-29571545 None:intergenic
ACAAGGTTCTAGTATTAATT+GGG 0.336603 1_1:+29572127 Msa0017710:CDS
AAACCACCATGTTTGAGATT+AGG 0.366318 1_1:-29571094 None:intergenic
AATTATCCACCAAGATTTGA+TGG 0.368986 1_1:+29572053 Msa0017710:CDS
AACATGGTACTGGTGGTAAC+TGG 0.369571 1_1:+29570800 Msa0017710:CDS
CATTCCAGAGATTGATCATA+TGG 0.369915 1_1:+29572022 Msa0017710:CDS
ATAATGACATAAAGAACTAT+TGG 0.370430 1_1:+29571487 Msa0017710:CDS
TTGGTTGTGGTTGTTATCAT+TGG 0.385791 1_1:-29571940 None:intergenic
GATAATGTTATCTTCTTCTT+CGG 0.391795 1_1:-29571119 None:intergenic
ATGTCATTATCAGTTCTTCC+TGG 0.397545 1_1:-29571474 None:intergenic
TTCTTGAACCAAATTTGATA+AGG 0.407035 1_1:-29571646 None:intergenic
TGCATGACATGTGGTAAATA+TGG 0.407502 1_1:-29571672 None:intergenic
AGAAAACTTCTTATGAAGCT+TGG 0.411643 1_1:+29571780 Msa0017710:CDS
TGCAGCCTTTACATTAGTAT+TGG 0.421799 1_1:+29571142 Msa0017710:CDS
GCTCGTAATAGAGGCAATAA+TGG 0.432154 1_1:+29571567 Msa0017710:CDS
CAGCAACAAGCTCGTAATAG+AGG 0.461617 1_1:+29571558 Msa0017710:CDS
AATTCCAACCCATCAAATCT+TGG 0.462721 1_1:-29572062 None:intergenic
TCCACCAAGATTTGATGGGT+TGG 0.464644 1_1:+29572058 Msa0017710:CDS
CATTTGTTGCGAATTGTACT+TGG 0.466808 1_1:-29571959 None:intergenic
AACATTGATGGTAGTGGAGG+TGG 0.467582 1_1:-29571714 None:intergenic
CAAGTACAATTCGCAACAAA+TGG 0.468082 1_1:+29571960 Msa0017710:CDS
TTGCGAATTGTACTTGGTTG+TGG 0.482944 1_1:-29571953 None:intergenic
AAACTTCTTATGAAGCTTGG+AGG 0.489488 1_1:+29571783 Msa0017710:CDS
TTTACATTAGTATTGGAAGC+AGG 0.496580 1_1:+29571149 Msa0017710:CDS
GATACCATATGATCAATCTC+TGG 0.503391 1_1:-29572026 None:intergenic
TTTGTGTATGACAACATTGA+TGG 0.508144 1_1:-29571726 None:intergenic
TGCTTCCAATACTAATGTAA+AGG 0.512738 1_1:-29571147 None:intergenic
GTGGAAAGAGTTGTCGTCTC+CGG 0.522056 1_1:+29571053 Msa0017710:CDS
CACAAATCACAATTTAACCT+TGG 0.527729 1_1:-29572196 None:intergenic
TACATAGAACAACATGGTAC+TGG 0.531565 1_1:+29570790 Msa0017710:CDS
CATTGATGGTAGTGGAGGTG+GGG 0.533607 1_1:-29571712 None:intergenic
ACATTGATGGTAGTGGAGGT+GGG 0.534119 1_1:-29571713 None:intergenic
GACAAAGCAAACGTGAAGAA+AGG 0.540882 1_1:+29570730 Msa0017710:CDS
GCATCTTCTTCTGGAGACCA+TGG 0.546774 1_1:-29570754 None:intergenic
ATAATTGCAGCTCAATTGCC+AGG 0.552173 1_1:+29571456 Msa0017710:CDS
ATTATCCACCAAGATTTGAT+GGG 0.556403 1_1:+29572054 Msa0017710:CDS
TATGACAACATTGATGGTAG+TGG 0.558740 1_1:-29571720 None:intergenic
ATTGATGGTAGTGGAGGTGG+GGG 0.560501 1_1:-29571711 None:intergenic
GGCGAAGATAGTTTAGCCAC+CGG 0.569935 1_1:-29571072 None:intergenic
TAAAGAACTATTGGAATACA+AGG 0.580554 1_1:+29571496 Msa0017710:CDS
AAGATGATGATAACTTGAAG+TGG 0.584448 1_1:-29572159 None:intergenic
CTTCTTGATTCCAAATACCA+AGG 0.584605 1_1:+29572179 Msa0017710:CDS
TCCAACCCATCAAATCTTGG+TGG 0.591459 1_1:-29572059 None:intergenic
ATTGATAATAATAAGATACA+AGG 0.601954 1_1:+29572110 Msa0017710:CDS
AGTTTATGATCAAGAACATG+TGG 0.602665 1_1:+29571893 Msa0017710:CDS
GAAAGAGTTGTCGTCTCCGG+TGG 0.603936 1_1:+29571056 Msa0017710:CDS
CTTCGCCCTAATCTCAAACA+TGG 0.609085 1_1:+29571088 Msa0017710:CDS
ACGTTTGCTTTGTCACAACA+AGG 0.610378 1_1:-29570721 None:intergenic
GACTCGGTGCAAGAAGAGCA+AGG 0.613143 1_1:+29571993 Msa0017710:CDS
CAAGGTTCTAGTATTAATTG+GGG 0.621220 1_1:+29572128 Msa0017710:CDS
ACAAGGAGCTCTACCCATGT+TGG 0.624253 1_1:-29570704 None:intergenic
CAAACGTGAAGAAAGGTCCA+TGG 0.630589 1_1:+29570737 Msa0017710:CDS
CGCCCTAATCTCAAACATGG+TGG 0.637157 1_1:+29571091 Msa0017710:CDS
AACCCAGAAAGACACCAACA+TGG 0.640355 1_1:+29570690 Msa0017710:exon
ATAGAACAACATGGTACTGG+TGG 0.656499 1_1:+29570793 Msa0017710:CDS
TTGTCATACACAAACCAACA+AGG 0.660089 1_1:+29571735 Msa0017710:CDS
GTTTATGATCAAGAACATGT+GGG 0.665568 1_1:+29571894 Msa0017710:CDS
ACCCAGAAAGACACCAACAT+GGG 0.673987 1_1:+29570691 Msa0017710:exon
AAATGGTCAATACTTTGACT+CGG 0.679619 1_1:+29571977 Msa0017710:CDS
GACAACATTGATGGTAGTGG+AGG 0.681316 1_1:-29571717 None:intergenic
AAATCTTACATAGAACAACA+TGG 0.711431 1_1:+29570784 Msa0017710:CDS
AGCAAAGGTTGCATGACATG+TGG 0.714384 1_1:-29571681 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAACATATTGAAAAAATTA+GGG - chr1_1:29570871-29570890 None:intergenic 10.0%
!! TTAAAAAAAATTCAAACTAT+TGG - chr1_1:29571347-29571366 None:intergenic 10.0%
!! TAAACATATTGAAAAAATTA+GGG - chr1_1:29570871-29570890 None:intergenic 10.0%
!! TTAAAAAAAATTCAAACTAT+TGG - chr1_1:29571347-29571366 None:intergenic 10.0%
!!! ATAATATTACCAATTTTTTG+TGG - chr1_1:29570835-29570854 None:intergenic 15.0%
!! GTAAACATATTGAAAAAATT+AGG - chr1_1:29570872-29570891 None:intergenic 15.0%
!!! AGATTAACCTAATTTTTTTT+TGG + chr1_1:29571008-29571027 Msa0017710:intron 15.0%
!!! ATTGATAATAATAAGATACA+AGG + chr1_1:29572110-29572129 Msa0017710:CDS 15.0%
!!! ATAATATTACCAATTTTTTG+TGG - chr1_1:29570835-29570854 None:intergenic 15.0%
!! GTAAACATATTGAAAAAATT+AGG - chr1_1:29570872-29570891 None:intergenic 15.0%
!!! AGATTAACCTAATTTTTTTT+TGG + chr1_1:29571008-29571027 Msa0017710:intron 15.0%
!!! ATTGATAATAATAAGATACA+AGG + chr1_1:29572110-29572129 Msa0017710:CDS 15.0%
!! TTTATCAAGGAAAAAAAGAA+AGG - chr1_1:29570905-29570924 None:intergenic 20.0%
!! GATGAATAACAAATTTATCA+AGG - chr1_1:29570918-29570937 None:intergenic 20.0%
!!! TAACCTAATTTTTTTTTGGA+TGG + chr1_1:29571012-29571031 Msa0017710:intron 20.0%
!! AAACCATCCAAAAAAAAATT+AGG - chr1_1:29571018-29571037 None:intergenic 20.0%
!!! ATTTTTTTTTGGATGGTTTT+AGG + chr1_1:29571019-29571038 Msa0017710:intron 20.0%
!! ATCTATAAAATCAAGACATA+AGG - chr1_1:29571270-29571289 None:intergenic 20.0%
!! ACAAAAAGTAACATATCATA+TGG - chr1_1:29571314-29571333 None:intergenic 20.0%
!!! TGATATGTTACTTTTTGTTT+TGG + chr1_1:29571316-29571335 Msa0017710:intron 20.0%
!! ATAATGACATAAAGAACTAT+TGG + chr1_1:29571487-29571506 Msa0017710:CDS 20.0%
!!! TGAATTTTCCTTATCAAATT+TGG + chr1_1:29571638-29571657 Msa0017710:CDS 20.0%
!! TTTATCAAGGAAAAAAAGAA+AGG - chr1_1:29570905-29570924 None:intergenic 20.0%
!! GATGAATAACAAATTTATCA+AGG - chr1_1:29570918-29570937 None:intergenic 20.0%
!!! TAACCTAATTTTTTTTTGGA+TGG + chr1_1:29571012-29571031 Msa0017710:intron 20.0%
!! AAACCATCCAAAAAAAAATT+AGG - chr1_1:29571018-29571037 None:intergenic 20.0%
!!! ATTTTTTTTTGGATGGTTTT+AGG + chr1_1:29571019-29571038 Msa0017710:intron 20.0%
!! ATCTATAAAATCAAGACATA+AGG - chr1_1:29571270-29571289 None:intergenic 20.0%
!! ACAAAAAGTAACATATCATA+TGG - chr1_1:29571314-29571333 None:intergenic 20.0%
!!! TGATATGTTACTTTTTGTTT+TGG + chr1_1:29571316-29571335 Msa0017710:intron 20.0%
!! ATAATGACATAAAGAACTAT+TGG + chr1_1:29571487-29571506 Msa0017710:CDS 20.0%
!!! TGAATTTTCCTTATCAAATT+TGG + chr1_1:29571638-29571657 Msa0017710:CDS 20.0%
!!! AGCTTTTTTATGATTGATTG+GGG - chr1_1:29570651-29570670 None:intergenic 25.0%
!!! GAGCTTTTTTATGATTGATT+GGG - chr1_1:29570652-29570671 None:intergenic 25.0%
!!! AGAGCTTTTTTATGATTGAT+TGG - chr1_1:29570653-29570672 None:intergenic 25.0%
! AAATCTTACATAGAACAACA+TGG + chr1_1:29570784-29570803 Msa0017710:CDS 25.0%
! GATAATGTTATCTTCTTCTT+CGG - chr1_1:29571122-29571141 None:intergenic 25.0%
! TAAAGAACTATTGGAATACA+AGG + chr1_1:29571496-29571515 Msa0017710:CDS 25.0%
! TTCTTGAACCAAATTTGATA+AGG - chr1_1:29571649-29571668 None:intergenic 25.0%
!! TACAAGGTTCTAGTATTAAT+TGG + chr1_1:29572126-29572145 Msa0017710:CDS 25.0%
!! ACAAGGTTCTAGTATTAATT+GGG + chr1_1:29572127-29572146 Msa0017710:CDS 25.0%
!!! AGCTTTTTTATGATTGATTG+GGG - chr1_1:29570651-29570670 None:intergenic 25.0%
!!! GAGCTTTTTTATGATTGATT+GGG - chr1_1:29570652-29570671 None:intergenic 25.0%
!!! AGAGCTTTTTTATGATTGAT+TGG - chr1_1:29570653-29570672 None:intergenic 25.0%
! AAATCTTACATAGAACAACA+TGG + chr1_1:29570784-29570803 Msa0017710:CDS 25.0%
! GATAATGTTATCTTCTTCTT+CGG - chr1_1:29571122-29571141 None:intergenic 25.0%
! TAAAGAACTATTGGAATACA+AGG + chr1_1:29571496-29571515 Msa0017710:CDS 25.0%
! TTCTTGAACCAAATTTGATA+AGG - chr1_1:29571649-29571668 None:intergenic 25.0%
!! TACAAGGTTCTAGTATTAAT+TGG + chr1_1:29572126-29572145 Msa0017710:CDS 25.0%
!! ACAAGGTTCTAGTATTAATT+GGG + chr1_1:29572127-29572146 Msa0017710:CDS 25.0%
ATTGCTCTTCCACAAAAAAT+TGG + chr1_1:29570823-29570842 Msa0017710:CDS 30.0%
CAAATGAAGTGAAGATATAG+TGG - chr1_1:29570940-29570959 None:intergenic 30.0%
TGCTTCCAATACTAATGTAA+AGG - chr1_1:29571150-29571169 None:intergenic 30.0%
! TTTACATTAGTATTGGAAGC+AGG + chr1_1:29571149-29571168 Msa0017710:CDS 30.0%
CTTTCATACCAAACCAAAAA+GGG - chr1_1:29571426-29571445 None:intergenic 30.0%
! AAGGTTGAAAAAGAAGCTTT+TGG + chr1_1:29571515-29571534 Msa0017710:CDS 30.0%
! AGGTTGAAAAAGAAGCTTTT+GGG + chr1_1:29571516-29571535 Msa0017710:CDS 30.0%
TTTGTGTATGACAACATTGA+TGG - chr1_1:29571729-29571748 None:intergenic 30.0%
AGAAAACTTCTTATGAAGCT+TGG + chr1_1:29571780-29571799 Msa0017710:CDS 30.0%
!! CATCCTAATACTACTTTTGA+TGG + chr1_1:29571825-29571844 Msa0017710:CDS 30.0%
CAACCATCAAAAGTAGTATT+AGG - chr1_1:29571831-29571850 None:intergenic 30.0%
AGTTTATGATCAAGAACATG+TGG + chr1_1:29571893-29571912 Msa0017710:CDS 30.0%
GTTTATGATCAAGAACATGT+GGG + chr1_1:29571894-29571913 Msa0017710:CDS 30.0%
AAATGGTCAATACTTTGACT+CGG + chr1_1:29571977-29571996 Msa0017710:CDS 30.0%
AATTATCCACCAAGATTTGA+TGG + chr1_1:29572053-29572072 Msa0017710:CDS 30.0%
ATTATCCACCAAGATTTGAT+GGG + chr1_1:29572054-29572073 Msa0017710:CDS 30.0%
! CAAGGTTCTAGTATTAATTG+GGG + chr1_1:29572128-29572147 Msa0017710:CDS 30.0%
AAGATGATGATAACTTGAAG+TGG - chr1_1:29572162-29572181 None:intergenic 30.0%
ATTGCTCTTCCACAAAAAAT+TGG + chr1_1:29570823-29570842 Msa0017710:CDS 30.0%
CAAATGAAGTGAAGATATAG+TGG - chr1_1:29570940-29570959 None:intergenic 30.0%
TGCTTCCAATACTAATGTAA+AGG - chr1_1:29571150-29571169 None:intergenic 30.0%
! TTTACATTAGTATTGGAAGC+AGG + chr1_1:29571149-29571168 Msa0017710:CDS 30.0%
CTTTCATACCAAACCAAAAA+GGG - chr1_1:29571426-29571445 None:intergenic 30.0%
! AAGGTTGAAAAAGAAGCTTT+TGG + chr1_1:29571515-29571534 Msa0017710:CDS 30.0%
! AGGTTGAAAAAGAAGCTTTT+GGG + chr1_1:29571516-29571535 Msa0017710:CDS 30.0%
TTTGTGTATGACAACATTGA+TGG - chr1_1:29571729-29571748 None:intergenic 30.0%
AGAAAACTTCTTATGAAGCT+TGG + chr1_1:29571780-29571799 Msa0017710:CDS 30.0%
!! CATCCTAATACTACTTTTGA+TGG + chr1_1:29571825-29571844 Msa0017710:CDS 30.0%
CAACCATCAAAAGTAGTATT+AGG - chr1_1:29571831-29571850 None:intergenic 30.0%
AGTTTATGATCAAGAACATG+TGG + chr1_1:29571893-29571912 Msa0017710:CDS 30.0%
GTTTATGATCAAGAACATGT+GGG + chr1_1:29571894-29571913 Msa0017710:CDS 30.0%
AAATGGTCAATACTTTGACT+CGG + chr1_1:29571977-29571996 Msa0017710:CDS 30.0%
AATTATCCACCAAGATTTGA+TGG + chr1_1:29572053-29572072 Msa0017710:CDS 30.0%
ATTATCCACCAAGATTTGAT+GGG + chr1_1:29572054-29572073 Msa0017710:CDS 30.0%
! CAAGGTTCTAGTATTAATTG+GGG + chr1_1:29572128-29572147 Msa0017710:CDS 30.0%
AAGATGATGATAACTTGAAG+TGG - chr1_1:29572162-29572181 None:intergenic 30.0%
TTGAGTTTAGCATCTTCTTC+TGG - chr1_1:29570766-29570785 None:intergenic 35.0%
TACATAGAACAACATGGTAC+TGG + chr1_1:29570790-29570809 Msa0017710:CDS 35.0%
! AACCACCATGTTTGAGATTA+GGG - chr1_1:29571096-29571115 None:intergenic 35.0%
! AAACCACCATGTTTGAGATT+AGG - chr1_1:29571097-29571116 None:intergenic 35.0%
TGCAGCCTTTACATTAGTAT+TGG + chr1_1:29571142-29571161 Msa0017710:CDS 35.0%
! TGAAAAGTGAAGACCCTTTT+TGG + chr1_1:29571410-29571429 Msa0017710:intron 35.0%
GCTTTCATACCAAACCAAAA+AGG - chr1_1:29571427-29571446 None:intergenic 35.0%
!!! TTTTGGTTTGGTATGAAAGC+AGG + chr1_1:29571427-29571446 Msa0017710:intron 35.0%
ATGTCATTATCAGTTCTTCC+TGG - chr1_1:29571477-29571496 None:intergenic 35.0%
! GGTTGAAAAAGAAGCTTTTG+GGG + chr1_1:29571517-29571536 Msa0017710:CDS 35.0%
TGCATGACATGTGGTAAATA+TGG - chr1_1:29571675-29571694 None:intergenic 35.0%
! TATGACAACATTGATGGTAG+TGG - chr1_1:29571723-29571742 None:intergenic 35.0%
TTGTCATACACAAACCAACA+AGG + chr1_1:29571735-29571754 Msa0017710:CDS 35.0%
AAACTTCTTATGAAGCTTGG+AGG + chr1_1:29571783-29571802 Msa0017710:CDS 35.0%
TTGGTTGTGGTTGTTATCAT+TGG - chr1_1:29571943-29571962 None:intergenic 35.0%
! CATTTGTTGCGAATTGTACT+TGG - chr1_1:29571962-29571981 None:intergenic 35.0%
CAAGTACAATTCGCAACAAA+TGG + chr1_1:29571960-29571979 Msa0017710:CDS 35.0%
CATTCCAGAGATTGATCATA+TGG + chr1_1:29572022-29572041 Msa0017710:CDS 35.0%
GATACCATATGATCAATCTC+TGG - chr1_1:29572029-29572048 None:intergenic 35.0%
AATTCCAACCCATCAAATCT+TGG - chr1_1:29572065-29572084 None:intergenic 35.0%
!!! GATGGGTTGGAATTCTTTTA+TGG + chr1_1:29572071-29572090 Msa0017710:CDS 35.0%
CTTCTTGATTCCAAATACCA+AGG + chr1_1:29572179-29572198 Msa0017710:CDS 35.0%
TTGAGTTTAGCATCTTCTTC+TGG - chr1_1:29570766-29570785 None:intergenic 35.0%
TACATAGAACAACATGGTAC+TGG + chr1_1:29570790-29570809 Msa0017710:CDS 35.0%
! AACCACCATGTTTGAGATTA+GGG - chr1_1:29571096-29571115 None:intergenic 35.0%
! AAACCACCATGTTTGAGATT+AGG - chr1_1:29571097-29571116 None:intergenic 35.0%
TGCAGCCTTTACATTAGTAT+TGG + chr1_1:29571142-29571161 Msa0017710:CDS 35.0%
! TGAAAAGTGAAGACCCTTTT+TGG + chr1_1:29571410-29571429 Msa0017710:intron 35.0%
GCTTTCATACCAAACCAAAA+AGG - chr1_1:29571427-29571446 None:intergenic 35.0%
!!! TTTTGGTTTGGTATGAAAGC+AGG + chr1_1:29571427-29571446 Msa0017710:intron 35.0%
ATGTCATTATCAGTTCTTCC+TGG - chr1_1:29571477-29571496 None:intergenic 35.0%
! GGTTGAAAAAGAAGCTTTTG+GGG + chr1_1:29571517-29571536 Msa0017710:CDS 35.0%
TGCATGACATGTGGTAAATA+TGG - chr1_1:29571675-29571694 None:intergenic 35.0%
! TATGACAACATTGATGGTAG+TGG - chr1_1:29571723-29571742 None:intergenic 35.0%
TTGTCATACACAAACCAACA+AGG + chr1_1:29571735-29571754 Msa0017710:CDS 35.0%
AAACTTCTTATGAAGCTTGG+AGG + chr1_1:29571783-29571802 Msa0017710:CDS 35.0%
TTGGTTGTGGTTGTTATCAT+TGG - chr1_1:29571943-29571962 None:intergenic 35.0%
! CATTTGTTGCGAATTGTACT+TGG - chr1_1:29571962-29571981 None:intergenic 35.0%
CAAGTACAATTCGCAACAAA+TGG + chr1_1:29571960-29571979 Msa0017710:CDS 35.0%
CATTCCAGAGATTGATCATA+TGG + chr1_1:29572022-29572041 Msa0017710:CDS 35.0%
GATACCATATGATCAATCTC+TGG - chr1_1:29572029-29572048 None:intergenic 35.0%
AATTCCAACCCATCAAATCT+TGG - chr1_1:29572065-29572084 None:intergenic 35.0%
!!! GATGGGTTGGAATTCTTTTA+TGG + chr1_1:29572071-29572090 Msa0017710:CDS 35.0%
CTTCTTGATTCCAAATACCA+AGG + chr1_1:29572179-29572198 Msa0017710:CDS 35.0%
ACGTTTGCTTTGTCACAACA+AGG - chr1_1:29570724-29570743 None:intergenic 40.0%
GACAAAGCAAACGTGAAGAA+AGG + chr1_1:29570730-29570749 Msa0017710:CDS 40.0%
! ATAGAACAACATGGTACTGG+TGG + chr1_1:29570793-29570812 Msa0017710:CDS 40.0%
!!! AGTGAAGACCCTTTTTGGTT+TGG + chr1_1:29571415-29571434 Msa0017710:intron 40.0%
ATAATTGCAGCTCAATTGCC+AGG + chr1_1:29571456-29571475 Msa0017710:CDS 40.0%
CTTGTTGCTGCTGATCTTTA+CGG - chr1_1:29571548-29571567 None:intergenic 40.0%
GCTCGTAATAGAGGCAATAA+TGG + chr1_1:29571567-29571586 Msa0017710:CDS 40.0%
! CTTGATCATTGAAGCCTTGT+TGG - chr1_1:29571752-29571771 None:intergenic 40.0%
! AAGCTTGGAGGAAGATTTTC+AGG + chr1_1:29571795-29571814 Msa0017710:CDS 40.0%
TTGCGAATTGTACTTGGTTG+TGG - chr1_1:29571956-29571975 None:intergenic 40.0%
ACGTTTGCTTTGTCACAACA+AGG - chr1_1:29570724-29570743 None:intergenic 40.0%
GACAAAGCAAACGTGAAGAA+AGG + chr1_1:29570730-29570749 Msa0017710:CDS 40.0%
! ATAGAACAACATGGTACTGG+TGG + chr1_1:29570793-29570812 Msa0017710:CDS 40.0%
!!! AGTGAAGACCCTTTTTGGTT+TGG + chr1_1:29571415-29571434 Msa0017710:intron 40.0%
ATAATTGCAGCTCAATTGCC+AGG + chr1_1:29571456-29571475 Msa0017710:CDS 40.0%
CTTGTTGCTGCTGATCTTTA+CGG - chr1_1:29571548-29571567 None:intergenic 40.0%
GCTCGTAATAGAGGCAATAA+TGG + chr1_1:29571567-29571586 Msa0017710:CDS 40.0%
! CTTGATCATTGAAGCCTTGT+TGG - chr1_1:29571752-29571771 None:intergenic 40.0%
! AAGCTTGGAGGAAGATTTTC+AGG + chr1_1:29571795-29571814 Msa0017710:CDS 40.0%
TTGCGAATTGTACTTGGTTG+TGG - chr1_1:29571956-29571975 None:intergenic 40.0%
!! GTTGGTGTCTTTCTGGGTTT+TGG - chr1_1:29570689-29570708 None:intergenic 45.0%
AACCCAGAAAGACACCAACA+TGG + chr1_1:29570690-29570709 Msa0017710:exon 45.0%
ACCCAGAAAGACACCAACAT+GGG + chr1_1:29570691-29570710 Msa0017710:exon 45.0%
! ACCCATGTTGGTGTCTTTCT+GGG - chr1_1:29570695-29570714 None:intergenic 45.0%
! TACCCATGTTGGTGTCTTTC+TGG - chr1_1:29570696-29570715 None:intergenic 45.0%
CAAACGTGAAGAAAGGTCCA+TGG + chr1_1:29570737-29570756 Msa0017710:CDS 45.0%
!! AACATGGTACTGGTGGTAAC+TGG + chr1_1:29570800-29570819 Msa0017710:CDS 45.0%
!!! GTTTTAGGCTTGAAGCGTTG+TGG + chr1_1:29571034-29571053 Msa0017710:intron 45.0%
CTTCGCCCTAATCTCAAACA+TGG + chr1_1:29571088-29571107 Msa0017710:CDS 45.0%
!! TGGTTTGGTATGAAAGCAGG+TGG + chr1_1:29571430-29571449 Msa0017710:intron 45.0%
CAGCAACAAGCTCGTAATAG+AGG + chr1_1:29571558-29571577 Msa0017710:CDS 45.0%
AGCAAAGGTTGCATGACATG+TGG - chr1_1:29571684-29571703 None:intergenic 45.0%
!! ACATTGATGGTAGTGGAGGT+GGG - chr1_1:29571716-29571735 None:intergenic 45.0%
!! AACATTGATGGTAGTGGAGG+TGG - chr1_1:29571717-29571736 None:intergenic 45.0%
!! GACAACATTGATGGTAGTGG+AGG - chr1_1:29571720-29571739 None:intergenic 45.0%
! TCCACCAAGATTTGATGGGT+TGG + chr1_1:29572058-29572077 Msa0017710:CDS 45.0%
TCCAACCCATCAAATCTTGG+TGG - chr1_1:29572062-29572081 None:intergenic 45.0%
!! GTTGGTGTCTTTCTGGGTTT+TGG - chr1_1:29570689-29570708 None:intergenic 45.0%
AACCCAGAAAGACACCAACA+TGG + chr1_1:29570690-29570709 Msa0017710:exon 45.0%
ACCCAGAAAGACACCAACAT+GGG + chr1_1:29570691-29570710 Msa0017710:exon 45.0%
! ACCCATGTTGGTGTCTTTCT+GGG - chr1_1:29570695-29570714 None:intergenic 45.0%
! TACCCATGTTGGTGTCTTTC+TGG - chr1_1:29570696-29570715 None:intergenic 45.0%
CAAACGTGAAGAAAGGTCCA+TGG + chr1_1:29570737-29570756 Msa0017710:CDS 45.0%
!! AACATGGTACTGGTGGTAAC+TGG + chr1_1:29570800-29570819 Msa0017710:CDS 45.0%
!!! GTTTTAGGCTTGAAGCGTTG+TGG + chr1_1:29571034-29571053 Msa0017710:intron 45.0%
CTTCGCCCTAATCTCAAACA+TGG + chr1_1:29571088-29571107 Msa0017710:CDS 45.0%
!! TGGTTTGGTATGAAAGCAGG+TGG + chr1_1:29571430-29571449 Msa0017710:intron 45.0%
CAGCAACAAGCTCGTAATAG+AGG + chr1_1:29571558-29571577 Msa0017710:CDS 45.0%
AGCAAAGGTTGCATGACATG+TGG - chr1_1:29571684-29571703 None:intergenic 45.0%
!! ACATTGATGGTAGTGGAGGT+GGG - chr1_1:29571716-29571735 None:intergenic 45.0%
!! AACATTGATGGTAGTGGAGG+TGG - chr1_1:29571717-29571736 None:intergenic 45.0%
!! GACAACATTGATGGTAGTGG+AGG - chr1_1:29571720-29571739 None:intergenic 45.0%
! TCCACCAAGATTTGATGGGT+TGG + chr1_1:29572058-29572077 Msa0017710:CDS 45.0%
TCCAACCCATCAAATCTTGG+TGG - chr1_1:29572062-29572081 None:intergenic 45.0%
ACAAGGAGCTCTACCCATGT+TGG - chr1_1:29570707-29570726 None:intergenic 50.0%
! GCATCTTCTTCTGGAGACCA+TGG - chr1_1:29570757-29570776 None:intergenic 50.0%
GTGGAAAGAGTTGTCGTCTC+CGG + chr1_1:29571053-29571072 Msa0017710:CDS 50.0%
GGCGAAGATAGTTTAGCCAC+CGG - chr1_1:29571075-29571094 None:intergenic 50.0%
CGCCCTAATCTCAAACATGG+TGG + chr1_1:29571091-29571110 Msa0017710:CDS 50.0%
!! ATTGATGGTAGTGGAGGTGG+GGG - chr1_1:29571714-29571733 None:intergenic 50.0%
!! CATTGATGGTAGTGGAGGTG+GGG - chr1_1:29571715-29571734 None:intergenic 50.0%
ACAAGGAGCTCTACCCATGT+TGG - chr1_1:29570707-29570726 None:intergenic 50.0%
! GCATCTTCTTCTGGAGACCA+TGG - chr1_1:29570757-29570776 None:intergenic 50.0%
GTGGAAAGAGTTGTCGTCTC+CGG + chr1_1:29571053-29571072 Msa0017710:CDS 50.0%
GGCGAAGATAGTTTAGCCAC+CGG - chr1_1:29571075-29571094 None:intergenic 50.0%
CGCCCTAATCTCAAACATGG+TGG + chr1_1:29571091-29571110 Msa0017710:CDS 50.0%
!! ATTGATGGTAGTGGAGGTGG+GGG - chr1_1:29571714-29571733 None:intergenic 50.0%
!! CATTGATGGTAGTGGAGGTG+GGG - chr1_1:29571715-29571734 None:intergenic 50.0%
GAAAGAGTTGTCGTCTCCGG+TGG + chr1_1:29571056-29571075 Msa0017710:CDS 55.0%
!! GGTGGGGGTGTTGATAGCAA+AGG - chr1_1:29571699-29571718 None:intergenic 55.0%
!! GACTCGGTGCAAGAAGAGCA+AGG + chr1_1:29571993-29572012 Msa0017710:CDS 55.0%
GAAAGAGTTGTCGTCTCCGG+TGG + chr1_1:29571056-29571075 Msa0017710:CDS 55.0%
!! GGTGGGGGTGTTGATAGCAA+AGG - chr1_1:29571699-29571718 None:intergenic 55.0%
!! GACTCGGTGCAAGAAGAGCA+AGG + chr1_1:29571993-29572012 Msa0017710:CDS 55.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 29570635 29572205 29570635 ID=Msa0017710;Name=Msa0017710
chr1_1 mRNA 29570635 29572205 29570635 ID=Msa0017710-mRNA-1;Parent=Msa0017710;Name=Msa0017710-mRNA-1;_AED=0.04;_eAED=0.04;_QI=74|1|0.66|1|1|1|3|0|340
chr1_1 exon 29570635 29570844 29570635 ID=Msa0017710-mRNA-1:exon:9849;Parent=Msa0017710-mRNA-1
chr1_1 exon 29571041 29571170 29571041 ID=Msa0017710-mRNA-1:exon:9850;Parent=Msa0017710-mRNA-1
chr1_1 exon 29571449 29572205 29571449 ID=Msa0017710-mRNA-1:exon:9851;Parent=Msa0017710-mRNA-1
chr1_1 five_prime_UTR 29570635 29570708 29570635 ID=Msa0017710-mRNA-1:five_prime_utr;Parent=Msa0017710-mRNA-1
chr1_1 CDS 29570709 29570844 29570709 ID=Msa0017710-mRNA-1:cds;Parent=Msa0017710-mRNA-1
chr1_1 CDS 29571041 29571170 29571041 ID=Msa0017710-mRNA-1:cds;Parent=Msa0017710-mRNA-1
chr1_1 CDS 29571449 29572205 29571449 ID=Msa0017710-mRNA-1:cds;Parent=Msa0017710-mRNA-1
Gene Sequence

>Msa0017710

ATGGGTAGAGCTCCTTGTTGTGACAAAGCAAACGTGAAGAAAGGTCCATGGTCTCCAGAAGAAGATGCTAAACTCAAATCTTACATAGAACAACATGGTACTGGTGGTAACTGGATTGCTCTTCCACAAAAAATTGGCTTGAAGCGTTGTGGAAAGAGTTGTCGTCTCCGGTGGCTAAACTATCTTCGCCCTAATCTCAAACATGGTGGTTTTTCCGAAGAAGAAGATAACATTATCTGCAGCCTTTACATTAGTATTGGAAGCAGGTGGTCGATAATTGCAGCTCAATTGCCAGGAAGAACTGATAATGACATAAAGAACTATTGGAATACAAGGTTGAAAAAGAAGCTTTTGGGGAAACACCGTAAAGATCAGCAGCAACAAGCTCGTAATAGAGGCAATAATGGTGTTATTATTAAGCAAGAAAGCAATAACAATAGAGTGATGAGTAGTAGTGAATTTTCCTTATCAAATTTGGTTCAAGAACAACCATATTTACCACATGTCATGCAACCTTTGCTATCAACACCCCCACCTCCACTACCATCAATGTTGTCATACACAAACCAACAAGGCTTCAATGATCAAGATTCTATTAGAAAACTTCTTATGAAGCTTGGAGGAAGATTTTCAGGTGATTATCATCCTAATACTACTTTTGATGGTTGTAATCTTCAATTTTCAAATGCTACTTCTTCAACTCATGAACAAGTTTATGATCAAGAACATGTGGGTTCTTCTACTTGTGTTAATTCTTCCAATGATAACAACCACAACCAAGTACAATTCGCAACAAATGGTCAATACTTTGACTCGGTGCAAGAAGAGCAAGGTAAATTCATTCCAGAGATTGATCATATGGTATCTACTAATTATCCACCAAGATTTGATGGGTTGGAATTCTTTTATGGTGAAGAAGACTTGAATATTGATAATAATAAGATACAAGGTTCTAGTATTAATTGGGGTGAAGCTACCACTTCAAGTTATCATCATCTTCTTGATTCCAAATACCAAGGTTAA
Protein sequence

>Msa0017710

MGRAPCCDKANVKKGPWSPEEDAKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNLKHGGFSEEEDNIICSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGKHRKDQQQQARNRGNNGVIIKQESNNNRVMSSSEFSLSNLVQEQPYLPHVMQPLLSTPPPPLPSMLSYTNQQGFNDQDSIRKLLMKLGGRFSGDYHPNTTFDGCNLQFSNATSSTHEQVYDQEHVGSSTCVNSSNDNNHNQVQFATNGQYFDSVQEEQGKFIPEIDHMVSTNYPPRFDGLEFFYGEEDLNIDNNKIQGSSINWGEATTSSYHHLLDSKYQG*