Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0434910 | XP_013462134.1 | 87.179 | 78 | 8 | 2 | 1 | 77 | 46 | 122 | 2.72e-35 | 127 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0434910 | A0A072V2A3 | 87.179 | 78 | 8 | 2 | 1 | 77 | 46 | 122 | 1.30e-35 | 127 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004940 | Msa0434910 | 0.827920 | 1.198072e-54 | -8.615850e-47 |
| Msa0004990 | Msa0434910 | 0.804650 | 1.950927e-49 | -8.615850e-47 |
| Msa0017710 | Msa0434910 | 0.802576 | 5.255274e-49 | -8.615850e-47 |
| Msa0024650 | Msa0434910 | 0.835218 | 1.907366e-56 | -8.615850e-47 |
| Msa0025560 | Msa0434910 | 0.804383 | 2.217896e-49 | -8.615850e-47 |
| Msa0047970 | Msa0434910 | 0.800057 | 1.722612e-48 | -8.615850e-47 |
| Msa0053040 | Msa0434910 | 0.809274 | 2.052266e-50 | -8.615850e-47 |
| Msa0060410 | Msa0434910 | 0.804594 | 2.004253e-49 | -8.615850e-47 |
| Msa0064990 | Msa0434910 | 0.805904 | 1.065734e-49 | -8.615850e-47 |
| Msa0098380 | Msa0434910 | 0.823765 | 1.161165e-53 | -8.615850e-47 |
| Msa0120450 | Msa0434910 | 0.816352 | 5.781606e-52 | -8.615850e-47 |
| Msa0130360 | Msa0434910 | 0.800264 | 1.563410e-48 | -8.615850e-47 |
| Msa0136090 | Msa0434910 | 0.812834 | 3.473239e-51 | -8.615850e-47 |
| Msa0143950 | Msa0434910 | 0.801024 | 1.094101e-48 | -8.615850e-47 |
| Msa0163340 | Msa0434910 | 0.813907 | 2.018320e-51 | -8.615850e-47 |
| Msa0163690 | Msa0434910 | 0.827718 | 1.340016e-54 | -8.615850e-47 |
| Msa0164560 | Msa0434910 | 0.814145 | 1.788547e-51 | -8.615850e-47 |
| Msa0167160 | Msa0434910 | -0.802912 | 4.479278e-49 | -8.615850e-47 |
| Msa0189990 | Msa0434910 | 0.803479 | 3.417889e-49 | -8.615850e-47 |
| Msa0199440 | Msa0434910 | 0.825696 | 4.071253e-54 | -8.615850e-47 |
| Msa0219720 | Msa0434910 | -0.800627 | 1.318631e-48 | -8.615850e-47 |
| Msa0224870 | Msa0434910 | 0.802137 | 6.470936e-49 | -8.615850e-47 |
| Msa0230920 | Msa0434910 | 0.806730 | 7.137245e-50 | -8.615850e-47 |
| Msa0369990 | Msa0434910 | 0.804004 | 2.660030e-49 | -8.615850e-47 |
| Msa0375930 | Msa0434910 | -0.814608 | 1.413057e-51 | -8.615850e-47 |
| Msa0384170 | Msa0434910 | 0.853723 | 1.979035e-61 | -8.615850e-47 |
| Msa0385280 | Msa0434910 | -0.805965 | 1.034716e-49 | -8.615850e-47 |
| Msa0403740 | Msa0434910 | -0.807133 | 5.864470e-50 | -8.615850e-47 |
| Msa0414480 | Msa0434910 | 0.818871 | 1.563130e-52 | -8.615850e-47 |
| Msa0415010 | Msa0434910 | 0.824692 | 7.033625e-54 | -8.615850e-47 |
| Msa0418230 | Msa0434910 | 0.830274 | 3.220637e-55 | -8.615850e-47 |
| Msa0421080 | Msa0434910 | 0.811989 | 5.311564e-51 | -8.615850e-47 |
| Msa0424570 | Msa0434910 | -0.814836 | 1.257418e-51 | -8.615850e-47 |
| Msa0433090 | Msa0434910 | 0.821909 | 3.142808e-53 | -8.615850e-47 |
| Msa0434910 | Msa0444210 | 0.817277 | 3.584727e-52 | -8.615850e-47 |
| Msa0434910 | Msa0449500 | 0.806203 | 9.218146e-50 | -8.615850e-47 |
| Msa0434910 | Msa0454160 | 0.800831 | 1.198382e-48 | -8.615850e-47 |
| Msa0434910 | Msa0459930 | 0.833288 | 5.811373e-56 | -8.615850e-47 |
| Msa0434910 | Msa0464620 | 0.847203 | 1.341945e-59 | -8.615850e-47 |
| Msa0434910 | Msa0478860 | 0.816413 | 5.600976e-52 | -8.615850e-47 |
| Msa0434910 | Msa0480540 | 0.801723 | 7.871774e-49 | -8.615850e-47 |
| Msa0434910 | Msa0493870 | 0.810055 | 1.393763e-50 | -8.615850e-47 |
| Msa0434910 | Msa0496070 | 0.805485 | 1.304616e-49 | -8.615850e-47 |
| Msa0434910 | Msa0510050 | 0.839807 | 1.270671e-57 | -8.615850e-47 |
| Msa0434910 | Msa0516000 | -0.812985 | 3.217783e-51 | -8.615850e-47 |
| Msa0434910 | Msa0524710 | 0.828408 | 9.139435e-55 | -8.615850e-47 |
| Msa0434910 | Msa0531040 | 0.827440 | 1.562356e-54 | -8.615850e-47 |
| Msa0434910 | Msa0537210 | 0.804754 | 1.855906e-49 | -8.615850e-47 |
| Msa0434910 | Msa0550980 | -0.805878 | 1.079309e-49 | -8.615850e-47 |
| Msa0434910 | Msa0554660 | 0.812187 | 4.810624e-51 | -8.615850e-47 |
| Msa0434910 | Msa0554770 | -0.824584 | 7.458945e-54 | -8.615850e-47 |
| Msa0434910 | Msa0557240 | 0.801217 | 9.994002e-49 | -8.615850e-47 |
| Msa0434910 | Msa0559440 | -0.808074 | 3.703346e-50 | -8.615850e-47 |
| Msa0434910 | Msa0559640 | -0.816982 | 4.175333e-52 | -8.615850e-47 |
| Msa0434910 | Msa0561830 | 0.821304 | 4.334639e-53 | -8.615850e-47 |
| Msa0434910 | Msa0567330 | 0.809610 | 1.738323e-50 | -8.615850e-47 |
| Msa0434910 | Msa0567570 | 0.829544 | 4.851100e-55 | -8.615850e-47 |
| Msa0434910 | Msa0568920 | 0.811084 | 8.353594e-51 | -8.615850e-47 |
| Msa0434910 | Msa0576320 | 0.804121 | 2.514346e-49 | -8.615850e-47 |
| Msa0434910 | Msa0580890 | -0.807495 | 4.916791e-50 | -8.615850e-47 |
| Msa0434910 | Msa0587930 | 0.835876 | 1.299682e-56 | -8.615850e-47 |
| Msa0434910 | Msa0594470 | 0.841774 | 3.874012e-58 | -8.615850e-47 |
| Msa0434910 | Msa0597800 | 0.808154 | 3.560788e-50 | -8.615850e-47 |
| Msa0434910 | Msa0597820 | 0.804314 | 2.292989e-49 | -8.615850e-47 |
| Msa0434910 | Msa0602100 | 0.806550 | 7.788859e-50 | -8.615850e-47 |
| Msa0434910 | Msa0606340 | -0.803462 | 3.446640e-49 | -8.615850e-47 |
| Msa0434910 | Msa0614960 | 0.814350 | 1.611442e-51 | -8.615850e-47 |
| Msa0434910 | Msa0622800 | -0.814946 | 1.188811e-51 | -8.615850e-47 |
| Msa0434910 | Msa0628200 | 0.811005 | 8.692191e-51 | -8.615850e-47 |
| Msa0434910 | Msa0629030 | 0.810213 | 1.288774e-50 | -8.615850e-47 |
| Msa0434910 | Msa0643230 | 0.835721 | 1.422931e-56 | -8.615850e-47 |
| Msa0434910 | Msa0644890 | -0.813602 | 2.355965e-51 | -8.615850e-47 |
| Msa0434910 | Msa0651820 | 0.803129 | 4.039541e-49 | -8.615850e-47 |
| Msa0434910 | Msa0652590 | 0.818073 | 2.371420e-52 | -8.615850e-47 |
| Msa0434910 | Msa0654400 | -0.803469 | 3.434578e-49 | -8.615850e-47 |
| Msa0434910 | Msa0654500 | -0.827579 | 1.447368e-54 | -8.615850e-47 |
| Msa0434910 | Msa0655370 | 0.821475 | 3.959039e-53 | -8.615850e-47 |
| Msa0434910 | Msa0658150 | 0.805355 | 1.389236e-49 | -8.615850e-47 |
| Msa0434910 | Msa0666580 | 0.814327 | 1.630301e-51 | -8.615850e-47 |
| Msa0434910 | Msa0677130 | 0.814694 | 1.352054e-51 | -8.615850e-47 |
| Msa0434910 | Msa0680460 | 0.817487 | 3.214455e-52 | -8.615850e-47 |
| Msa0434910 | Msa0682110 | 0.809498 | 1.836711e-50 | -8.615850e-47 |
| Msa0434910 | Msa0685390 | -0.806583 | 7.666240e-50 | -8.615850e-47 |
| Msa0434910 | Msa0686830 | 0.805425 | 1.343136e-49 | -8.615850e-47 |
| Msa0434910 | Msa0689840 | 0.810686 | 1.018795e-50 | -8.615850e-47 |
| Msa0434910 | Msa0690100 | -0.802799 | 4.726210e-49 | -8.615850e-47 |
| Msa0434910 | Msa0699170 | 0.825047 | 5.800001e-54 | -8.615850e-47 |
| Msa0434910 | Msa0703000 | 0.808056 | 3.736066e-50 | -8.615850e-47 |
| Msa0434910 | Msa0706700 | -0.803824 | 2.898815e-49 | -8.615850e-47 |
| Msa0434910 | Msa0709790 | 0.980123 | 1.694522e-149 | -8.615850e-47 |
| Msa0434910 | Msa0714230 | -0.814643 | 1.387739e-51 | -8.615850e-47 |
| Msa0434910 | Msa0728230 | 0.801509 | 8.706009e-49 | -8.615850e-47 |
| Msa0434910 | Msa0728570 | 0.804406 | 2.193933e-49 | -8.615850e-47 |
| Msa0434910 | Msa0730890 | 0.821850 | 3.242169e-53 | -8.615850e-47 |
| Msa0434910 | Msa0743370 | 0.844485 | 7.345159e-59 | -8.615850e-47 |
| Msa0434910 | Msa0744550 | 0.802674 | 5.015764e-49 | -8.615850e-47 |
| Msa0434910 | Msa0747710 | 0.822149 | 2.763998e-53 | -8.615850e-47 |
| Msa0434910 | Msa0750790 | 0.837676 | 4.517044e-57 | -8.615850e-47 |
| Msa0434910 | Msa0773030 | 0.821117 | 4.788110e-53 | -8.615850e-47 |
| Msa0434910 | Msa0776340 | 0.807409 | 5.127225e-50 | -8.615850e-47 |
| Msa0434910 | Msa0786600 | -0.812467 | 4.177330e-51 | -8.615850e-47 |
| Msa0434910 | Msa0792410 | 0.830217 | 3.325976e-55 | -8.615850e-47 |
| Msa0434910 | Msa0792890 | 0.801777 | 7.671008e-49 | -8.615850e-47 |
| Msa0434910 | Msa0794090 | 0.835693 | 1.446627e-56 | -8.615850e-47 |
| Msa0434910 | Msa0794100 | 0.822174 | 2.728222e-53 | -8.615850e-47 |
| Msa0434910 | Msa0795320 | 0.825013 | 5.907646e-54 | -8.615850e-47 |
| Msa0434910 | Msa0798840 | 0.800629 | 1.317705e-48 | -8.615850e-47 |
| Msa0434910 | Msa0803880 | 0.800617 | 1.324798e-48 | -8.615850e-47 |
| Msa0434910 | Msa0812720 | 0.838233 | 3.248548e-57 | -8.615850e-47 |
| Msa0434910 | Msa0813840 | 0.801617 | 8.272550e-49 | -8.615850e-47 |
| Msa0434910 | Msa0814660 | 0.841550 | 4.438336e-58 | -8.615850e-47 |
| Msa0434910 | Msa0822680 | -0.823505 | 1.336146e-53 | -8.615850e-47 |
| Msa0434910 | Msa0828910 | 0.800724 | 1.260423e-48 | -8.615850e-47 |
| Msa0434910 | Msa0829250 | -0.811378 | 7.213882e-51 | -8.615850e-47 |
| Msa0434910 | Msa0831310 | 0.817614 | 3.010314e-52 | -8.615850e-47 |
| Msa0434910 | Msa0831320 | 0.826003 | 3.442018e-54 | -8.615850e-47 |
| Msa0434910 | Msa0831450 | 0.808943 | 2.415130e-50 | -8.615850e-47 |
| Msa0434910 | Msa0841930 | 0.800618 | 1.324182e-48 | -8.615850e-47 |
| Msa0434910 | Msa0846870 | 0.807477 | 4.960097e-50 | -8.615850e-47 |
| Msa0434910 | Msa0847140 | 0.816142 | 6.440684e-52 | -8.615850e-47 |
| Msa0434910 | Msa0853080 | 0.811483 | 6.844695e-51 | -8.615850e-47 |
| Msa0434910 | Msa0854380 | 0.806536 | 7.845296e-50 | -8.615850e-47 |
| Msa0434910 | Msa0870220 | -0.802943 | 4.412426e-49 | -8.615850e-47 |
| Msa0434910 | Msa0874750 | 0.805633 | 1.214741e-49 | -8.615850e-47 |
| Msa0434910 | Msa0890210 | 0.846531 | 2.049034e-59 | -8.615850e-47 |
| Msa0434910 | Msa0896920 | 0.850826 | 1.320939e-60 | -8.615850e-47 |
| Msa0434910 | Msa0896950 | 0.810533 | 1.099201e-50 | -8.615850e-47 |
| Msa0434910 | Msa0906680 | 0.819586 | 1.074814e-52 | -8.615850e-47 |
| Msa0434910 | Msa0910560 | 0.814569 | 1.441201e-51 | -8.615850e-47 |
| Msa0434910 | Msa0948430 | 0.804494 | 2.102880e-49 | -8.615850e-47 |
| Msa0434910 | Msa0962290 | 0.812762 | 3.601435e-51 | -8.615850e-47 |
| Msa0434910 | Msa0975950 | 0.829208 | 5.854767e-55 | -8.615850e-47 |
| Msa0434910 | Msa0976400 | 0.810250 | 1.265739e-50 | -8.615850e-47 |
| Msa0434910 | Msa0985380 | 0.815247 | 1.019302e-51 | -8.615850e-47 |
| Msa0434910 | Msa0996980 | 0.813282 | 2.769496e-51 | -8.615850e-47 |
| Msa0434910 | Msa1007900 | 0.803317 | 3.693979e-49 | -8.615850e-47 |
| Msa0434910 | Msa1016450 | -0.810140 | 1.336617e-50 | -8.615850e-47 |
| Msa0434910 | Msa1024420 | 0.802620 | 5.144784e-49 | -8.615850e-47 |
| Msa0434910 | Msa1031060 | 0.817538 | 3.131368e-52 | -8.615850e-47 |
| Msa0434910 | Msa1035050 | 0.843062 | 1.764680e-58 | -8.615850e-47 |
| Msa0434910 | Msa1057940 | -0.832811 | 7.638578e-56 | -8.615850e-47 |
| Msa0434910 | Msa1062060 | 0.814638 | 1.391693e-51 | -8.615850e-47 |
| Msa0434910 | Msa1064940 | 0.804833 | 1.786317e-49 | -8.615850e-47 |
| Msa0434910 | Msa1069250 | 0.810512 | 1.111175e-50 | -8.615850e-47 |
| Msa0434910 | Msa1075030 | 0.811004 | 8.696011e-51 | -8.615850e-47 |
| Msa0434910 | Msa1075090 | 0.825337 | 4.952794e-54 | -8.615850e-47 |
| Msa0434910 | Msa1085820 | 0.837561 | 4.833088e-57 | -8.615850e-47 |
| Msa0434910 | Msa1087200 | 0.813464 | 2.526385e-51 | -8.615850e-47 |
| Msa0434910 | Msa1087210 | 0.830244 | 3.275917e-55 | -8.615850e-47 |
| Msa0434910 | Msa1099650 | 0.809582 | 1.761944e-50 | -8.615850e-47 |
| Msa0434910 | Msa1100330 | 0.817220 | 3.691676e-52 | -8.615850e-47 |
| Msa0434910 | Msa1107220 | 0.808342 | 3.246713e-50 | -8.615850e-47 |
| Msa0434910 | Msa1107520 | 0.822835 | 1.914908e-53 | -8.615850e-47 |
| Msa0434910 | Msa1108560 | 0.828473 | 8.817805e-55 | -8.615850e-47 |
| Msa0434910 | Msa1108610 | 0.801919 | 7.173516e-49 | -8.615850e-47 |
| Msa0434910 | Msa1110900 | 0.812281 | 4.587260e-51 | -8.615850e-47 |
| Msa0434910 | Msa1115900 | 0.810056 | 1.393374e-50 | -8.615850e-47 |
| Msa0434910 | Msa1119670 | 0.825758 | 3.936621e-54 | -8.615850e-47 |
| Msa0434910 | Msa1120960 | 0.814740 | 1.321167e-51 | -8.615850e-47 |
| Msa0434910 | Msa1129120 | -0.807149 | 5.819008e-50 | -8.615850e-47 |
| Msa0434910 | Msa1130150 | -0.805455 | 1.324150e-49 | -8.615850e-47 |
| Msa0434910 | Msa1136630 | 0.838108 | 3.497252e-57 | -8.615850e-47 |
| Msa0434910 | Msa1136690 | 0.820110 | 8.154424e-53 | -8.615850e-47 |
| Msa0434910 | Msa1136760 | 0.806562 | 7.743268e-50 | -8.615850e-47 |
| Msa0434910 | Msa1142390 | 0.808655 | 2.783360e-50 | -8.615850e-47 |
| Msa0434910 | Msa1150760 | 0.821673 | 3.563258e-53 | -8.615850e-47 |
| Msa0434910 | Msa1156100 | -0.801460 | 8.912651e-49 | -8.615850e-47 |
| Msa0434910 | Msa1160540 | 0.818987 | 1.471155e-52 | -8.615850e-47 |
| Msa0434910 | Msa1162430 | 0.800081 | 1.703756e-48 | -8.615850e-47 |
| Msa0434910 | Msa1174280 | 0.821151 | 4.703583e-53 | -8.615850e-47 |
| Msa0434910 | Msa1185270 | 0.811154 | 8.069575e-51 | -8.615850e-47 |
| Msa0434910 | Msa1187750 | 0.800494 | 1.403808e-48 | -8.615850e-47 |
| Msa0434910 | Msa1191270 | 0.822220 | 2.661709e-53 | -8.615850e-47 |
| Msa0434910 | Msa1191530 | -0.801616 | 8.277862e-49 | -8.615850e-47 |
| Msa0434910 | Msa1199540 | -0.809761 | 1.612737e-50 | -8.615850e-47 |
| Msa0434910 | Msa1202110 | 0.826922 | 2.079756e-54 | -8.615850e-47 |
| Msa0434910 | Msa1205120 | 0.819719 | 1.001810e-52 | -8.615850e-47 |
| Msa0434910 | Msa1208050 | 0.814089 | 1.840158e-51 | -8.615850e-47 |
| Msa0434910 | Msa1211610 | 0.812150 | 4.899135e-51 | -8.615850e-47 |
| Msa0434910 | Msa1211940 | 0.804355 | 2.247544e-49 | -8.615850e-47 |
| Msa0434910 | Msa1212080 | 0.806479 | 8.063059e-50 | -8.615850e-47 |
| Msa0434910 | Msa1221520 | 0.826742 | 2.296184e-54 | -8.615850e-47 |
| Msa0434910 | Msa1223960 | 0.823281 | 1.507254e-53 | -8.615850e-47 |
| Msa0434910 | Msa1223990 | 0.805721 | 1.164316e-49 | -8.615850e-47 |
| Msa0434910 | Msa1239190 | 0.800429 | 1.447398e-48 | -8.615850e-47 |
| Msa0434910 | Msa1239210 | 0.813128 | 2.993666e-51 | -8.615850e-47 |
| Msa0434910 | Msa1241960 | 0.804863 | 1.761070e-49 | -8.615850e-47 |
| Msa0434910 | Msa1254870 | 0.826239 | 3.026050e-54 | -8.615850e-47 |
| Msa0434910 | Msa1259570 | 0.803069 | 4.155859e-49 | -8.615850e-47 |
| Msa0434910 | Msa1262900 | 0.810212 | 1.289364e-50 | -8.615850e-47 |
| Msa0434910 | Msa1263110 | 0.816462 | 5.461156e-52 | -8.615850e-47 |
| Msa0434910 | Msa1264940 | 0.825720 | 4.018974e-54 | -8.615850e-47 |
| Msa0434910 | Msa1269500 | 0.813349 | 2.677748e-51 | -8.615850e-47 |
| Msa0434910 | Msa1273320 | 0.845597 | 3.677526e-59 | -8.615850e-47 |
| Msa0434910 | Msa1279200 | -0.805365 | 1.382946e-49 | -8.615850e-47 |
| Msa0434910 | Msa1281780 | 0.832775 | 7.797848e-56 | -8.615850e-47 |
| Msa0434910 | Msa1290090 | -0.818577 | 1.822581e-52 | -8.615850e-47 |
| Msa0434910 | Msa1299480 | 0.808279 | 3.349225e-50 | -8.615850e-47 |
| Msa0434910 | Msa1300570 | 0.813891 | 2.034765e-51 | -8.615850e-47 |
| Msa0434910 | Msa1303150 | 0.825248 | 5.200083e-54 | -8.615850e-47 |
| Msa0434910 | Msa1319010 | 0.809502 | 1.833597e-50 | -8.615850e-47 |
| Msa0434910 | Msa1320160 | 0.820500 | 6.638097e-53 | -8.615850e-47 |
| Msa0434910 | Msa1321010 | 0.819086 | 1.396503e-52 | -8.615850e-47 |
| Msa0434910 | Msa1322380 | 0.808644 | 2.798908e-50 | -8.615850e-47 |
| Msa0434910 | Msa1323120 | 0.800311 | 1.529499e-48 | -8.615850e-47 |
| Msa0434910 | Msa1328430 | 0.827027 | 1.962716e-54 | -8.615850e-47 |
| Msa0434910 | Msa1328680 | -0.809539 | 1.799581e-50 | -8.615850e-47 |
| Msa0434910 | Msa1334000 | 0.828774 | 7.458092e-55 | -8.615850e-47 |
| Msa0434910 | Msa1338510 | 0.811342 | 7.344782e-51 | -8.615850e-47 |
| Msa0434910 | Msa1339530 | 0.809921 | 1.489717e-50 | -8.615850e-47 |
| Msa0434910 | Msa1341710 | -0.803157 | 3.984994e-49 | -8.615850e-47 |
| Msa0434910 | Msa1344450 | 0.809568 | 1.774332e-50 | -8.615850e-47 |
| Msa0434910 | Msa1349420 | 0.819261 | 1.274251e-52 | -8.615850e-47 |
| Msa0434910 | Msa1357840 | 0.808648 | 2.792981e-50 | -8.615850e-47 |
| Msa0434910 | Msa1364690 | 0.823216 | 1.560920e-53 | -8.615850e-47 |
| Msa0434910 | Msa1376880 | 0.837903 | 3.948827e-57 | -8.615850e-47 |
| Msa0434910 | Msa1383220 | 0.802150 | 6.429948e-49 | -8.615850e-47 |
| Msa0434910 | Msa1384130 | 0.844790 | 6.078034e-59 | -8.615850e-47 |
| Msa0434910 | Msa1387100 | -0.801402 | 9.159040e-49 | -8.615850e-47 |
| Msa0434910 | Msa1388720 | -0.805890 | 1.073018e-49 | -8.615850e-47 |
| Msa0434910 | Msa1395080 | 0.809196 | 2.132524e-50 | -8.615850e-47 |
| Msa0434910 | Msa1398120 | 0.806529 | 7.869584e-50 | -8.615850e-47 |
| Msa0434910 | Msa1407810 | 0.820590 | 6.328515e-53 | -8.615850e-47 |
| Msa0434910 | Msa1408230 | -0.805704 | 1.174158e-49 | -8.615850e-47 |
| Msa0434910 | Msa1410500 | -0.803315 | 3.695887e-49 | -8.615850e-47 |
| Msa0434910 | Msa1417220 | 0.804187 | 2.437083e-49 | -8.615850e-47 |
| Msa0434910 | Msa1432730 | -0.802610 | 5.170782e-49 | -8.615850e-47 |
| Msa0434910 | Msa1433360 | 0.802653 | 5.066721e-49 | -8.615850e-47 |
| Msa0434910 | Msa1437590 | 0.828619 | 8.131296e-55 | -8.615850e-47 |
| Msa0434910 | Msa1437780 | 0.821256 | 4.448165e-53 | -8.615850e-47 |
| Msa0434910 | Msa1438410 | -0.801474 | 8.851057e-49 | -8.615850e-47 |
| Msa0434910 | Msa1453890 | 0.807186 | 5.715881e-50 | -8.615850e-47 |
| Msa0434910 | Msa1455200 | 0.812929 | 3.309798e-51 | -8.615850e-47 |
| Msa0434910 | Msa1458270 | 0.800865 | 1.179525e-48 | -8.615850e-47 |
| Msa0434910 | Msa1462610 | 0.828422 | 9.068740e-55 | -8.615850e-47 |
| Msa0434910 | Msa1464140 | 0.816467 | 5.447307e-52 | -8.615850e-47 |
| Msa0244310 | Msa0434910 | 0.807543 | 4.801934e-50 | -8.615850e-47 |
| Msa0245660 | Msa0434910 | 0.801822 | 7.511645e-49 | -8.615850e-47 |
| Msa0247780 | Msa0434910 | 0.837785 | 4.234155e-57 | -8.615850e-47 |
| Msa0253230 | Msa0434910 | -0.808509 | 2.991007e-50 | -8.615850e-47 |
| Msa0261020 | Msa0434910 | -0.814890 | 1.223761e-51 | -8.615850e-47 |
| Msa0275730 | Msa0434910 | 0.823366 | 1.440079e-53 | -8.615850e-47 |
| Msa0280160 | Msa0434910 | 0.825612 | 4.263894e-54 | -8.615850e-47 |
| Msa0299130 | Msa0434910 | -0.805918 | 1.058626e-49 | -8.615850e-47 |
| Msa0303900 | Msa0434910 | 0.811420 | 7.062709e-51 | -8.615850e-47 |
| Msa0307630 | Msa0434910 | 0.829682 | 4.490588e-55 | -8.615850e-47 |
| Msa0324810 | Msa0434910 | 0.805086 | 1.581956e-49 | -8.615850e-47 |
| Msa0325260 | Msa0434910 | 0.837326 | 5.551979e-57 | -8.615850e-47 |
| Msa0331190 | Msa0434910 | 0.827975 | 1.162075e-54 | -8.615850e-47 |
| Msa0333770 | Msa0434910 | 0.826862 | 2.149040e-54 | -8.615850e-47 |
| Msa0336550 | Msa0434910 | -0.817375 | 3.407246e-52 | -8.615850e-47 |
| Msa0340700 | Msa0434910 | -0.805314 | 1.417085e-49 | -8.615850e-47 |
| Msa0354550 | Msa0434910 | 0.804925 | 1.709391e-49 | -8.615850e-47 |
| Msa0354600 | Msa0434910 | 0.803893 | 2.805313e-49 | -8.615850e-47 |
| Msa0357470 | Msa0434910 | 0.802232 | 6.185737e-49 | -8.615850e-47 |
| Msa0357510 | Msa0434910 | 0.811264 | 7.635997e-51 | -8.615850e-47 |
| Msa0364030 | Msa0434910 | -0.806563 | 7.740801e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0434910 | MtrunA17_Chr3g0141701 | 87.179 | 78 | 8 | 2 | 1 | 77 | 46 | 122 | 2.50e-39 | 127 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 20 sgRNAs with CRISPR-Local
Find 19 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATACGGTTGCAGCTGGTGC+TGG | 0.372363 | 3_2:+87935795 | None:intergenic |
| TTTGACTTGGACTTGTACTT+TGG | 0.409420 | 3_2:+87935686 | None:intergenic |
| CTCATGTATCTTGTTTGACT+TGG | 0.410489 | 3_2:+87935673 | None:intergenic |
| ATACGGTTGCAGCTGGTGCT+GGG | 0.483882 | 3_2:+87935796 | None:intergenic |
| CAAGTCAGTGGTTGTAGAGC+AGG | 0.484666 | 3_2:-87935826 | Msa0434910:CDS |
| CTGCTCTACAACCACTGACT+TGG | 0.511839 | 3_2:+87935827 | None:intergenic |
| ACCACTGACTTGGCAGGTGG+CGG | 0.515445 | 3_2:+87935837 | None:intergenic |
| TTGTACTTTGGAAGCATCAT+CGG | 0.516399 | 3_2:+87935698 | None:intergenic |
| TCTACAACCACTGACTTGGC+AGG | 0.516779 | 3_2:+87935831 | None:intergenic |
| ATGAAGGTAAGAAGAATGAT+CGG | 0.544526 | 3_2:-87935891 | Msa0434910:CDS |
| TGAAGGTAAGAAGAATGATC+GGG | 0.567599 | 3_2:-87935890 | Msa0434910:CDS |
| TGGCAATGGTAATAATGATA+CGG | 0.579053 | 3_2:+87935779 | None:intergenic |
| AATAATGATACGGTTGCAGC+TGG | 0.580071 | 3_2:+87935789 | None:intergenic |
| ACCGCCACCTGCCAAGTCAG+TGG | 0.586261 | 3_2:-87935838 | Msa0434910:CDS |
| TGATTATGATGCGATTGTGA+TGG | 0.609805 | 3_2:+87935753 | None:intergenic |
| TGATGCGATTGTGATGGAGT+TGG | 0.619596 | 3_2:+87935759 | None:intergenic |
| TACTTTGGAAGCATCATCGG+TGG | 0.630715 | 3_2:+87935701 | None:intergenic |
| ACAACCACTGACTTGGCAGG+TGG | 0.640558 | 3_2:+87935834 | None:intergenic |
| TACGGTTGCAGCTGGTGCTG+GGG | 0.642249 | 3_2:+87935797 | None:intergenic |
| GATTGTGATGGAGTTGGCAA+TGG | 0.656251 | 3_2:+87935765 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ATGAAGGTAAGAAGAATGAT+CGG | - | chr3_2:87935674-87935693 | Msa0434910:CDS | 30.0% | |
| TGGCAATGGTAATAATGATA+CGG | + | chr3_2:87935789-87935808 | None:intergenic | 30.0% | |
| TGAAGGTAAGAAGAATGATC+GGG | - | chr3_2:87935675-87935694 | Msa0434910:CDS | 35.0% | |
| TGATTATGATGCGATTGTGA+TGG | + | chr3_2:87935815-87935834 | None:intergenic | 35.0% | |
| !! | TTGTACTTTGGAAGCATCAT+CGG | + | chr3_2:87935870-87935889 | None:intergenic | 35.0% |
| !! | TTTGACTTGGACTTGTACTT+TGG | + | chr3_2:87935882-87935901 | None:intergenic | 35.0% |
| AATAATGATACGGTTGCAGC+TGG | + | chr3_2:87935779-87935798 | None:intergenic | 40.0% | |
| ! | GATTGTGATGGAGTTGGCAA+TGG | + | chr3_2:87935803-87935822 | None:intergenic | 45.0% |
| ! | TGATGCGATTGTGATGGAGT+TGG | + | chr3_2:87935809-87935828 | None:intergenic | 45.0% |
| !! | TACTTTGGAAGCATCATCGG+TGG | + | chr3_2:87935867-87935886 | None:intergenic | 45.0% |
| !! | TCTACAACCACTGACTTGGC+AGG | + | chr3_2:87935737-87935756 | None:intergenic | 50.0% |
| ! | CTGCTCTACAACCACTGACT+TGG | + | chr3_2:87935741-87935760 | None:intergenic | 50.0% |
| CAAGTCAGTGGTTGTAGAGC+AGG | - | chr3_2:87935739-87935758 | Msa0434910:CDS | 50.0% | |
| !! | ACAACCACTGACTTGGCAGG+TGG | + | chr3_2:87935734-87935753 | None:intergenic | 55.0% |
| ATACGGTTGCAGCTGGTGCT+GGG | + | chr3_2:87935772-87935791 | None:intergenic | 55.0% | |
| !! | ACCACTGACTTGGCAGGTGG+CGG | + | chr3_2:87935731-87935750 | None:intergenic | 60.0% |
| ! | TACGGTTGCAGCTGGTGCTG+GGG | + | chr3_2:87935771-87935790 | None:intergenic | 60.0% |
| GATACGGTTGCAGCTGGTGC+TGG | + | chr3_2:87935773-87935792 | None:intergenic | 60.0% | |
| ACCGCCACCTGCCAAGTCAG+TGG | - | chr3_2:87935727-87935746 | Msa0434910:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 87935674 | 87935913 | 87935674 | ID=Msa0434910;Name=Msa0434910 |
| chr3_2 | mRNA | 87935674 | 87935913 | 87935674 | ID=Msa0434910-mRNA-1;Parent=Msa0434910;Name=Msa0434910-mRNA-1;_AED=0.24;_eAED=0.24;_QI=0|-1|0|1|-1|1|1|0|79 |
| chr3_2 | exon | 87935674 | 87935913 | 87935674 | ID=Msa0434910-mRNA-1:exon:25783;Parent=Msa0434910-mRNA-1 |
| chr3_2 | CDS | 87935674 | 87935913 | 87935674 | ID=Msa0434910-mRNA-1:cds;Parent=Msa0434910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
