Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0709790 | XP_013462134.1 | 87.179 | 78 | 8 | 2 | 1 | 77 | 46 | 122 | 2.72e-35 | 127 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0709790 | A0A072V2A3 | 87.179 | 78 | 8 | 2 | 1 | 77 | 46 | 122 | 1.30e-35 | 127 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004940 | Msa0709790 | 0.823518 | 1.326750e-53 | -8.615850e-47 |
| Msa0008980 | Msa0709790 | 0.802317 | 5.941637e-49 | -8.615850e-47 |
| Msa0011060 | Msa0709790 | -0.811795 | 5.854780e-51 | -8.615850e-47 |
| Msa0011100 | Msa0709790 | -0.801094 | 1.059007e-48 | -8.615850e-47 |
| Msa0011410 | Msa0709790 | -0.811722 | 6.072286e-51 | -8.615850e-47 |
| Msa0011440 | Msa0709790 | -0.804459 | 2.138825e-49 | -8.615850e-47 |
| Msa0013270 | Msa0709790 | 0.810963 | 8.876637e-51 | -8.615850e-47 |
| Msa0017710 | Msa0709790 | 0.813885 | 2.040645e-51 | -8.615850e-47 |
| Msa0024650 | Msa0709790 | 0.836299 | 1.014866e-56 | -8.615850e-47 |
| Msa0027020 | Msa0709790 | -0.805059 | 1.602911e-49 | -8.615850e-47 |
| Msa0047560 | Msa0709790 | -0.801094 | 1.058813e-48 | -8.615850e-47 |
| Msa0047970 | Msa0709790 | 0.801253 | 9.823242e-49 | -8.615850e-47 |
| Msa0053040 | Msa0709790 | 0.800589 | 1.342727e-48 | -8.615850e-47 |
| Msa0060410 | Msa0709790 | 0.810440 | 1.151316e-50 | -8.615850e-47 |
| Msa0064990 | Msa0709790 | 0.811739 | 6.022023e-51 | -8.615850e-47 |
| Msa0098380 | Msa0709790 | 0.824804 | 6.617380e-54 | -8.615850e-47 |
| Msa0105140 | Msa0709790 | -0.806447 | 8.191296e-50 | -8.615850e-47 |
| Msa0120450 | Msa0709790 | 0.814961 | 1.180121e-51 | -8.615850e-47 |
| Msa0606340 | Msa0709790 | -0.811822 | 5.775575e-51 | -8.615850e-47 |
| Msa0614960 | Msa0709790 | 0.807368 | 5.229866e-50 | -8.615850e-47 |
| Msa0615070 | Msa0709790 | 0.810661 | 1.031702e-50 | -8.615850e-47 |
| Msa0622800 | Msa0709790 | -0.813112 | 3.018301e-51 | -8.615850e-47 |
| Msa0628200 | Msa0709790 | 0.811534 | 6.672992e-51 | -8.615850e-47 |
| Msa0629030 | Msa0709790 | 0.804143 | 2.488425e-49 | -8.615850e-47 |
| Msa0629160 | Msa0709790 | 0.801954 | 7.056986e-49 | -8.615850e-47 |
| Msa0643230 | Msa0709790 | 0.833707 | 4.567727e-56 | -8.615850e-47 |
| Msa0644890 | Msa0709790 | -0.807240 | 5.568265e-50 | -8.615850e-47 |
| Msa0647300 | Msa0709790 | 0.807809 | 4.215253e-50 | -8.615850e-47 |
| Msa0651820 | Msa0709790 | 0.814497 | 1.495148e-51 | -8.615850e-47 |
| Msa0652590 | Msa0709790 | 0.814147 | 1.786108e-51 | -8.615850e-47 |
| Msa0654400 | Msa0709790 | -0.813240 | 2.828976e-51 | -8.615850e-47 |
| Msa0654500 | Msa0709790 | -0.835310 | 1.807492e-56 | -8.615850e-47 |
| Msa0655370 | Msa0709790 | 0.817833 | 2.686759e-52 | -8.615850e-47 |
| Msa0656570 | Msa0709790 | -0.804289 | 2.319870e-49 | -8.615850e-47 |
| Msa0658150 | Msa0709790 | 0.804437 | 2.161135e-49 | -8.615850e-47 |
| Msa0666580 | Msa0709790 | 0.809423 | 1.906673e-50 | -8.615850e-47 |
| Msa0677130 | Msa0709790 | 0.829505 | 4.958422e-55 | -8.615850e-47 |
| Msa0680460 | Msa0709790 | 0.816403 | 5.629670e-52 | -8.615850e-47 |
| Msa0682110 | Msa0709790 | 0.821523 | 3.860038e-53 | -8.615850e-47 |
| Msa0682160 | Msa0709790 | 0.805573 | 1.250354e-49 | -8.615850e-47 |
| Msa0685390 | Msa0709790 | -0.813862 | 2.065143e-51 | -8.615850e-47 |
| Msa0686830 | Msa0709790 | 0.815750 | 7.877552e-52 | -8.615850e-47 |
| Msa0689840 | Msa0709790 | 0.823809 | 1.134081e-53 | -8.615850e-47 |
| Msa0690100 | Msa0709790 | -0.814760 | 1.307402e-51 | -8.615850e-47 |
| Msa0695250 | Msa0709790 | -0.803877 | 2.826696e-49 | -8.615850e-47 |
| Msa0699170 | Msa0709790 | 0.820778 | 5.730660e-53 | -8.615850e-47 |
| Msa0703000 | Msa0709790 | 0.806594 | 7.624041e-50 | -8.615850e-47 |
| Msa0706700 | Msa0709790 | -0.813275 | 2.780236e-51 | -8.615850e-47 |
| Msa0709790 | Msa0714230 | -0.815479 | 9.053957e-52 | -8.615850e-47 |
| Msa0709790 | Msa0728230 | 0.802328 | 5.911595e-49 | -8.615850e-47 |
| Msa0709790 | Msa0728570 | 0.805709 | 1.170944e-49 | -8.615850e-47 |
| Msa0709790 | Msa0730890 | 0.821073 | 4.902047e-53 | -8.615850e-47 |
| Msa0709790 | Msa0743370 | 0.844682 | 6.500023e-59 | -8.615850e-47 |
| Msa0709790 | Msa0744550 | 0.816270 | 6.029185e-52 | -8.615850e-47 |
| Msa0709790 | Msa0744560 | 0.804146 | 2.484825e-49 | -8.615850e-47 |
| Msa0709790 | Msa0747710 | 0.816207 | 6.227956e-52 | -8.615850e-47 |
| Msa0709790 | Msa0750790 | 0.835355 | 1.761011e-56 | -8.615850e-47 |
| Msa0709790 | Msa0768670 | 0.808486 | 3.025491e-50 | -8.615850e-47 |
| Msa0709790 | Msa0773030 | 0.814100 | 1.829862e-51 | -8.615850e-47 |
| Msa0709790 | Msa0786600 | -0.804548 | 2.048609e-49 | -8.615850e-47 |
| Msa0709790 | Msa0792410 | 0.841859 | 3.679204e-58 | -8.615850e-47 |
| Msa0709790 | Msa0794090 | 0.823811 | 1.132721e-53 | -8.615850e-47 |
| Msa0709790 | Msa0794100 | 0.820725 | 5.892908e-53 | -8.615850e-47 |
| Msa0709790 | Msa0795320 | 0.823350 | 1.452497e-53 | -8.615850e-47 |
| Msa0709790 | Msa0795910 | -0.800213 | 1.601311e-48 | -8.615850e-47 |
| Msa0709790 | Msa0802600 | 0.801197 | 1.008811e-48 | -8.615850e-47 |
| Msa0709790 | Msa0812720 | 0.846307 | 2.358482e-59 | -8.615850e-47 |
| Msa0709790 | Msa0814660 | 0.834858 | 2.350637e-56 | -8.615850e-47 |
| Msa0709790 | Msa0822680 | -0.815552 | 8.718892e-52 | -8.615850e-47 |
| Msa0709790 | Msa0829250 | -0.815809 | 7.644699e-52 | -8.615850e-47 |
| Msa0709790 | Msa0829770 | -0.809735 | 1.633932e-50 | -8.615850e-47 |
| Msa0709790 | Msa0829990 | 0.804498 | 2.098414e-49 | -8.615850e-47 |
| Msa0709790 | Msa0831310 | 0.817234 | 3.666027e-52 | -8.615850e-47 |
| Msa0709790 | Msa0831320 | 0.816712 | 4.800109e-52 | -8.615850e-47 |
| Msa0709790 | Msa0831450 | 0.800628 | 1.318533e-48 | -8.615850e-47 |
| Msa0709790 | Msa0841930 | 0.802327 | 5.913072e-49 | -8.615850e-47 |
| Msa0709790 | Msa0846870 | 0.807580 | 4.714761e-50 | -8.615850e-47 |
| Msa0709790 | Msa0847140 | 0.808559 | 2.917618e-50 | -8.615850e-47 |
| Msa0709790 | Msa0853080 | 0.812305 | 4.532231e-51 | -8.615850e-47 |
| Msa0709790 | Msa0854380 | 0.800353 | 1.499905e-48 | -8.615850e-47 |
| Msa0709790 | Msa0862750 | -0.801667 | 8.081203e-49 | -8.615850e-47 |
| Msa0709790 | Msa0869660 | 0.810162 | 1.321971e-50 | -8.615850e-47 |
| Msa0709790 | Msa0870220 | -0.826537 | 2.569234e-54 | -8.615850e-47 |
| Msa0709790 | Msa0871420 | 0.809622 | 1.727460e-50 | -8.615850e-47 |
| Msa0709790 | Msa0874750 | 0.808195 | 3.488976e-50 | -8.615850e-47 |
| Msa0709790 | Msa0890210 | 0.838636 | 2.556317e-57 | -8.615850e-47 |
| Msa0709790 | Msa0896920 | 0.846660 | 1.888711e-59 | -8.615850e-47 |
| Msa0709790 | Msa0896950 | 0.807071 | 6.046471e-50 | -8.615850e-47 |
| Msa0709790 | Msa0898970 | 0.800773 | 1.231473e-48 | -8.615850e-47 |
| Msa0709790 | Msa0903460 | -0.812631 | 3.847462e-51 | -8.615850e-47 |
| Msa0709790 | Msa0906100 | -0.804033 | 2.622533e-49 | -8.615850e-47 |
| Msa0709790 | Msa0906660 | 0.802552 | 5.314819e-49 | -8.615850e-47 |
| Msa0709790 | Msa0906680 | 0.826786 | 2.241071e-54 | -8.615850e-47 |
| Msa0709790 | Msa0910560 | 0.800463 | 1.424076e-48 | -8.615850e-47 |
| Msa0709790 | Msa0935930 | -0.815624 | 8.403208e-52 | -8.615850e-47 |
| Msa0709790 | Msa0936630 | 0.812876 | 3.400044e-51 | -8.615850e-47 |
| Msa0709790 | Msa0941150 | -0.806555 | 7.770163e-50 | -8.615850e-47 |
| Msa0709790 | Msa0945160 | -0.801729 | 7.849691e-49 | -8.615850e-47 |
| Msa0709790 | Msa0962290 | 0.808976 | 2.376812e-50 | -8.615850e-47 |
| Msa0709790 | Msa0973770 | 0.806243 | 9.042201e-50 | -8.615850e-47 |
| Msa0709790 | Msa0975950 | 0.837334 | 5.526593e-57 | -8.615850e-47 |
| Msa0709790 | Msa0976400 | 0.806245 | 9.031613e-50 | -8.615850e-47 |
| Msa0709790 | Msa0985380 | 0.805048 | 1.610847e-49 | -8.615850e-47 |
| Msa0709790 | Msa0996980 | 0.811877 | 5.620105e-51 | -8.615850e-47 |
| Msa0709790 | Msa1002550 | -0.802872 | 4.565156e-49 | -8.615850e-47 |
| Msa0709790 | Msa1006030 | 0.803863 | 2.845827e-49 | -8.615850e-47 |
| Msa0709790 | Msa1007900 | 0.801618 | 8.272264e-49 | -8.615850e-47 |
| Msa0709790 | Msa1021620 | 0.803278 | 3.761657e-49 | -8.615850e-47 |
| Msa0709790 | Msa1029860 | 0.802652 | 5.067735e-49 | -8.615850e-47 |
| Msa0709790 | Msa1031060 | 0.807580 | 4.715254e-50 | -8.615850e-47 |
| Msa0709790 | Msa1035050 | 0.843753 | 1.153928e-58 | -8.615850e-47 |
| Msa0709790 | Msa1057940 | -0.838282 | 3.154132e-57 | -8.615850e-47 |
| Msa0709790 | Msa1062060 | 0.815839 | 7.525261e-52 | -8.615850e-47 |
| Msa0709790 | Msa1064940 | 0.804607 | 1.992176e-49 | -8.615850e-47 |
| Msa0709790 | Msa1069250 | 0.809690 | 1.670293e-50 | -8.615850e-47 |
| Msa0709790 | Msa1075030 | 0.806790 | 6.933841e-50 | -8.615850e-47 |
| Msa0709790 | Msa1075090 | 0.830521 | 2.801927e-55 | -8.615850e-47 |
| Msa0709790 | Msa1078590 | -0.802872 | 4.565156e-49 | -8.615850e-47 |
| Msa0709790 | Msa1085820 | 0.839473 | 1.551622e-57 | -8.615850e-47 |
| Msa0709790 | Msa1087200 | 0.803935 | 2.748839e-49 | -8.615850e-47 |
| Msa0709790 | Msa1087210 | 0.833414 | 5.407617e-56 | -8.615850e-47 |
| Msa0709790 | Msa1099650 | 0.808626 | 2.824259e-50 | -8.615850e-47 |
| Msa0709790 | Msa1100330 | 0.814096 | 1.833148e-51 | -8.615850e-47 |
| Msa0709790 | Msa1103450 | 0.800449 | 1.433533e-48 | -8.615850e-47 |
| Msa0709790 | Msa1104020 | -0.807412 | 5.119758e-50 | -8.615850e-47 |
| Msa0709790 | Msa1107220 | 0.806500 | 7.982153e-50 | -8.615850e-47 |
| Msa0709790 | Msa1107520 | 0.819850 | 9.351026e-53 | -8.615850e-47 |
| Msa0709790 | Msa1108560 | 0.829677 | 4.502668e-55 | -8.615850e-47 |
| Msa0709790 | Msa1110900 | 0.821873 | 3.203634e-53 | -8.615850e-47 |
| Msa0709790 | Msa1115900 | 0.807104 | 5.949564e-50 | -8.615850e-47 |
| Msa0709790 | Msa1115980 | 0.805154 | 1.531218e-49 | -8.615850e-47 |
| Msa0709790 | Msa1119670 | 0.809704 | 1.659276e-50 | -8.615850e-47 |
| Msa0709790 | Msa1120960 | 0.803202 | 3.901102e-49 | -8.615850e-47 |
| Msa0709790 | Msa1121720 | -0.805885 | 1.075353e-49 | -8.615850e-47 |
| Msa0709790 | Msa1124220 | 0.802615 | 5.158732e-49 | -8.615850e-47 |
| Msa0709790 | Msa1129120 | -0.822401 | 2.416197e-53 | -8.615850e-47 |
| Msa0709790 | Msa1130150 | -0.811003 | 8.698687e-51 | -8.615850e-47 |
| Msa0709790 | Msa1132880 | -0.801180 | 1.016885e-48 | -8.615850e-47 |
| Msa0709790 | Msa1136630 | 0.839213 | 1.812692e-57 | -8.615850e-47 |
| Msa0709790 | Msa1136690 | 0.814908 | 1.212475e-51 | -8.615850e-47 |
| Msa0709790 | Msa1136760 | 0.808787 | 2.608629e-50 | -8.615850e-47 |
| Msa0709790 | Msa1142390 | 0.812537 | 4.033562e-51 | -8.615850e-47 |
| Msa0709790 | Msa1150760 | 0.821197 | 4.588814e-53 | -8.615850e-47 |
| Msa0709790 | Msa1156100 | -0.804245 | 2.369654e-49 | -8.615850e-47 |
| Msa0709790 | Msa1160540 | 0.819593 | 1.070718e-52 | -8.615850e-47 |
| Msa0709790 | Msa1162430 | 0.803562 | 3.285431e-49 | -8.615850e-47 |
| Msa0709790 | Msa1169590 | -0.802475 | 5.513647e-49 | -8.615850e-47 |
| Msa0709790 | Msa1174280 | 0.826931 | 2.068735e-54 | -8.615850e-47 |
| Msa0709790 | Msa1185270 | 0.813058 | 3.101863e-51 | -8.615850e-47 |
| Msa0709790 | Msa1187750 | 0.802285 | 6.032911e-49 | -8.615850e-47 |
| Msa0709790 | Msa1191270 | 0.823062 | 1.695667e-53 | -8.615850e-47 |
| Msa0709790 | Msa1191530 | -0.808282 | 3.343682e-50 | -8.615850e-47 |
| Msa0709790 | Msa1194480 | -0.802708 | 4.935481e-49 | -8.615850e-47 |
| Msa0709790 | Msa1199540 | -0.822253 | 2.614907e-53 | -8.615850e-47 |
| Msa0709790 | Msa1202110 | 0.831104 | 2.016969e-55 | -8.615850e-47 |
| Msa0709790 | Msa1205120 | 0.830761 | 2.447415e-55 | -8.615850e-47 |
| Msa0709790 | Msa1208050 | 0.813792 | 2.138825e-51 | -8.615850e-47 |
| Msa0709790 | Msa1211610 | 0.809796 | 1.585043e-50 | -8.615850e-47 |
| Msa0709790 | Msa1211940 | 0.813880 | 2.045883e-51 | -8.615850e-47 |
| Msa0709790 | Msa1212080 | 0.812163 | 4.867930e-51 | -8.615850e-47 |
| Msa0709790 | Msa1212150 | -0.804346 | 2.257776e-49 | -8.615850e-47 |
| Msa0709790 | Msa1221520 | 0.832015 | 1.202892e-55 | -8.615850e-47 |
| Msa0709790 | Msa1223960 | 0.831583 | 1.537405e-55 | -8.615850e-47 |
| Msa0709790 | Msa1223990 | 0.805030 | 1.624851e-49 | -8.615850e-47 |
| Msa0709790 | Msa1239210 | 0.815725 | 7.980294e-52 | -8.615850e-47 |
| Msa0709790 | Msa1241960 | 0.808855 | 2.522820e-50 | -8.615850e-47 |
| Msa0709790 | Msa1254870 | 0.830014 | 3.726415e-55 | -8.615850e-47 |
| Msa0709790 | Msa1259570 | 0.809333 | 1.993010e-50 | -8.615850e-47 |
| Msa0709790 | Msa1262900 | 0.830880 | 2.288352e-55 | -8.615850e-47 |
| Msa0709790 | Msa1263110 | 0.821835 | 3.268630e-53 | -8.615850e-47 |
| Msa0709790 | Msa1264940 | 0.832059 | 1.173404e-55 | -8.615850e-47 |
| Msa0709790 | Msa1269500 | 0.816183 | 6.305628e-52 | -8.615850e-47 |
| Msa0709790 | Msa1273320 | 0.849630 | 2.858822e-60 | -8.615850e-47 |
| Msa0709790 | Msa1279200 | -0.816033 | 6.811648e-52 | -8.615850e-47 |
| Msa0709790 | Msa1281780 | 0.842569 | 2.387596e-58 | -8.615850e-47 |
| Msa0709790 | Msa1290090 | -0.822072 | 2.879845e-53 | -8.615850e-47 |
| Msa0709790 | Msa1295210 | -0.800658 | 1.299859e-48 | -8.615850e-47 |
| Msa0709790 | Msa1299480 | 0.805355 | 1.389541e-49 | -8.615850e-47 |
| Msa0709790 | Msa1300570 | 0.819274 | 1.265587e-52 | -8.615850e-47 |
| Msa0709790 | Msa1303150 | 0.834874 | 2.328922e-56 | -8.615850e-47 |
| Msa0709790 | Msa1313720 | 0.806581 | 7.673934e-50 | -8.615850e-47 |
| Msa0709790 | Msa1319010 | 0.808958 | 2.397728e-50 | -8.615850e-47 |
| Msa0709790 | Msa1320160 | 0.817127 | 3.873837e-52 | -8.615850e-47 |
| Msa0709790 | Msa1321010 | 0.824481 | 7.886536e-54 | -8.615850e-47 |
| Msa0709790 | Msa1322380 | 0.809262 | 2.063688e-50 | -8.615850e-47 |
| Msa0709790 | Msa1328430 | 0.830683 | 2.558108e-55 | -8.615850e-47 |
| Msa0709790 | Msa1328680 | -0.822881 | 1.868615e-53 | -8.615850e-47 |
| Msa0709790 | Msa1334000 | 0.834712 | 2.558185e-56 | -8.615850e-47 |
| Msa0709790 | Msa1339530 | 0.811086 | 8.348556e-51 | -8.615850e-47 |
| Msa0709790 | Msa1341710 | -0.809322 | 2.004165e-50 | -8.615850e-47 |
| Msa0709790 | Msa1342360 | -0.811348 | 7.322308e-51 | -8.615850e-47 |
| Msa0709790 | Msa1344450 | 0.808855 | 2.522348e-50 | -8.615850e-47 |
| Msa0709790 | Msa1349420 | 0.814210 | 1.729843e-51 | -8.615850e-47 |
| Msa0709790 | Msa1350590 | -0.802473 | 5.517002e-49 | -8.615850e-47 |
| Msa0709790 | Msa1356100 | -0.806110 | 9.646552e-50 | -8.615850e-47 |
| Msa0709790 | Msa1357840 | 0.805650 | 1.205179e-49 | -8.615850e-47 |
| Msa0709790 | Msa1364690 | 0.828186 | 1.033919e-54 | -8.615850e-47 |
| Msa0709790 | Msa1368420 | 0.812574 | 3.959893e-51 | -8.615850e-47 |
| Msa0709790 | Msa1376880 | 0.838215 | 3.282741e-57 | -8.615850e-47 |
| Msa0709790 | Msa1383220 | 0.815478 | 9.058193e-52 | -8.615850e-47 |
| Msa0709790 | Msa1384130 | 0.846309 | 2.354509e-59 | -8.615850e-47 |
| Msa0709790 | Msa1386910 | -0.801720 | 7.883041e-49 | -8.615850e-47 |
| Msa0709790 | Msa1387100 | -0.802622 | 5.141000e-49 | -8.615850e-47 |
| Msa0709790 | Msa1388720 | -0.820630 | 6.196281e-53 | -8.615850e-47 |
| Msa0709790 | Msa1395080 | 0.807124 | 5.891519e-50 | -8.615850e-47 |
| Msa0709790 | Msa1398120 | 0.808137 | 3.589649e-50 | -8.615850e-47 |
| Msa0709790 | Msa1407810 | 0.829485 | 5.014814e-55 | -8.615850e-47 |
| Msa0709790 | Msa1408230 | -0.812279 | 4.593353e-51 | -8.615850e-47 |
| Msa0709790 | Msa1410480 | -0.803578 | 3.260422e-49 | -8.615850e-47 |
| Msa0709790 | Msa1410500 | -0.813831 | 2.097628e-51 | -8.615850e-47 |
| Msa0709790 | Msa1415510 | -0.802302 | 5.985260e-49 | -8.615850e-47 |
| Msa0709790 | Msa1417220 | 0.800663 | 1.296781e-48 | -8.615850e-47 |
| Msa0709790 | Msa1432730 | -0.809952 | 1.467133e-50 | -8.615850e-47 |
| Msa0709790 | Msa1433360 | 0.813817 | 2.112416e-51 | -8.615850e-47 |
| Msa0709790 | Msa1437590 | 0.829955 | 3.853189e-55 | -8.615850e-47 |
| Msa0709790 | Msa1437780 | 0.830027 | 3.700510e-55 | -8.615850e-47 |
| Msa0709790 | Msa1438410 | -0.811682 | 6.197569e-51 | -8.615850e-47 |
| Msa0709790 | Msa1453890 | 0.801552 | 8.532790e-49 | -8.615850e-47 |
| Msa0709790 | Msa1455200 | 0.812331 | 4.473486e-51 | -8.615850e-47 |
| Msa0709790 | Msa1458270 | 0.803101 | 4.092969e-49 | -8.615850e-47 |
| Msa0709790 | Msa1462610 | 0.839069 | 1.975724e-57 | -8.615850e-47 |
| Msa0709790 | Msa1464140 | 0.821104 | 4.820350e-53 | -8.615850e-47 |
| Msa0121320 | Msa0709790 | 0.800933 | 1.142190e-48 | -8.615850e-47 |
| Msa0127220 | Msa0709790 | -0.802717 | 4.914355e-49 | -8.615850e-47 |
| Msa0136090 | Msa0709790 | 0.805486 | 1.304248e-49 | -8.615850e-47 |
| Msa0141410 | Msa0709790 | 0.809117 | 2.216657e-50 | -8.615850e-47 |
| Msa0150000 | Msa0709790 | 0.801909 | 7.208387e-49 | -8.615850e-47 |
| Msa0163340 | Msa0709790 | 0.815104 | 1.096809e-51 | -8.615850e-47 |
| Msa0163690 | Msa0709790 | 0.827657 | 1.385936e-54 | -8.615850e-47 |
| Msa0164560 | Msa0709790 | 0.826346 | 2.853643e-54 | -8.615850e-47 |
| Msa0166190 | Msa0709790 | 0.800832 | 1.197807e-48 | -8.615850e-47 |
| Msa0167160 | Msa0709790 | -0.809442 | 1.888339e-50 | -8.615850e-47 |
| Msa0183960 | Msa0709790 | -0.805828 | 1.105791e-49 | -8.615850e-47 |
| Msa0189990 | Msa0709790 | 0.809425 | 1.904830e-50 | -8.615850e-47 |
| Msa0199440 | Msa0709790 | 0.821142 | 4.723864e-53 | -8.615850e-47 |
| Msa0206370 | Msa0709790 | 0.807158 | 5.793547e-50 | -8.615850e-47 |
| Msa0211460 | Msa0709790 | 0.809186 | 2.143178e-50 | -8.615850e-47 |
| Msa0219720 | Msa0709790 | -0.800178 | 1.627759e-48 | -8.615850e-47 |
| Msa0224870 | Msa0709790 | 0.814067 | 1.860358e-51 | -8.615850e-47 |
| Msa0230920 | Msa0709790 | 0.806367 | 8.512747e-50 | -8.615850e-47 |
| Msa0232660 | Msa0709790 | -0.808474 | 3.042489e-50 | -8.615850e-47 |
| Msa0233210 | Msa0709790 | 0.801133 | 1.039715e-48 | -8.615850e-47 |
| Msa0364910 | Msa0709790 | -0.801451 | 8.949590e-49 | -8.615850e-47 |
| Msa0369990 | Msa0709790 | 0.806253 | 8.997205e-50 | -8.615850e-47 |
| Msa0375930 | Msa0709790 | -0.823870 | 1.097649e-53 | -8.615850e-47 |
| Msa0384170 | Msa0709790 | 0.842166 | 3.052100e-58 | -8.615850e-47 |
| Msa0385280 | Msa0709790 | -0.811363 | 7.269793e-51 | -8.615850e-47 |
| Msa0386910 | Msa0709790 | 0.809380 | 1.947053e-50 | -8.615850e-47 |
| Msa0403740 | Msa0709790 | -0.819361 | 1.209578e-52 | -8.615850e-47 |
| Msa0414480 | Msa0709790 | 0.813666 | 2.280301e-51 | -8.615850e-47 |
| Msa0415010 | Msa0709790 | 0.833777 | 4.388414e-56 | -8.615850e-47 |
| Msa0418230 | Msa0709790 | 0.830029 | 3.695570e-55 | -8.615850e-47 |
| Msa0421080 | Msa0709790 | 0.813381 | 2.634621e-51 | -8.615850e-47 |
| Msa0424570 | Msa0709790 | -0.824157 | 9.397433e-54 | -8.615850e-47 |
| Msa0433090 | Msa0709790 | 0.827968 | 1.166804e-54 | -8.615850e-47 |
| Msa0434910 | Msa0709790 | 0.980123 | 1.694522e-149 | -8.615850e-47 |
| Msa0444210 | Msa0709790 | 0.823177 | 1.593634e-53 | -8.615850e-47 |
| Msa0449500 | Msa0709790 | 0.815453 | 9.171580e-52 | -8.615850e-47 |
| Msa0454770 | Msa0709790 | 0.804064 | 2.583881e-49 | -8.615850e-47 |
| Msa0456450 | Msa0709790 | -0.811292 | 7.531704e-51 | -8.615850e-47 |
| Msa0459930 | Msa0709790 | 0.844875 | 5.766193e-59 | -8.615850e-47 |
| Msa0464620 | Msa0709790 | 0.843824 | 1.104499e-58 | -8.615850e-47 |
| Msa0478860 | Msa0709790 | 0.804019 | 2.640894e-49 | -8.615850e-47 |
| Msa0480540 | Msa0709790 | 0.816958 | 4.228629e-52 | -8.615850e-47 |
| Msa0480550 | Msa0709790 | 0.800114 | 1.677848e-48 | -8.615850e-47 |
| Msa0244310 | Msa0709790 | 0.804324 | 2.281651e-49 | -8.615850e-47 |
| Msa0247780 | Msa0709790 | 0.838165 | 3.381366e-57 | -8.615850e-47 |
| Msa0248320 | Msa0709790 | 0.804469 | 2.128589e-49 | -8.615850e-47 |
| Msa0253230 | Msa0709790 | -0.812484 | 4.143199e-51 | -8.615850e-47 |
| Msa0259770 | Msa0709790 | -0.802239 | 6.166500e-49 | -8.615850e-47 |
| Msa0261020 | Msa0709790 | -0.808077 | 3.697026e-50 | -8.615850e-47 |
| Msa0261350 | Msa0709790 | -0.802601 | 5.191316e-49 | -8.615850e-47 |
| Msa0270730 | Msa0709790 | -0.800289 | 1.545365e-48 | -8.615850e-47 |
| Msa0275730 | Msa0709790 | 0.815239 | 1.023656e-51 | -8.615850e-47 |
| Msa0280160 | Msa0709790 | 0.822466 | 2.334099e-53 | -8.615850e-47 |
| Msa0287480 | Msa0709790 | 0.808278 | 3.349796e-50 | -8.615850e-47 |
| Msa0298690 | Msa0709790 | 0.802023 | 6.829281e-49 | -8.615850e-47 |
| Msa0299130 | Msa0709790 | -0.811711 | 6.107477e-51 | -8.615850e-47 |
| Msa0303900 | Msa0709790 | 0.818022 | 2.434155e-52 | -8.615850e-47 |
| Msa0307630 | Msa0709790 | 0.841365 | 4.968146e-58 | -8.615850e-47 |
| Msa0318360 | Msa0709790 | 0.800254 | 1.570842e-48 | -8.615850e-47 |
| Msa0324810 | Msa0709790 | 0.808491 | 3.017898e-50 | -8.615850e-47 |
| Msa0325260 | Msa0709790 | 0.837589 | 4.754108e-57 | -8.615850e-47 |
| Msa0331190 | Msa0709790 | 0.820531 | 6.530083e-53 | -8.615850e-47 |
| Msa0333770 | Msa0709790 | 0.830385 | 3.024968e-55 | -8.615850e-47 |
| Msa0336550 | Msa0709790 | -0.816441 | 5.521228e-52 | -8.615850e-47 |
| Msa0340700 | Msa0709790 | -0.812284 | 4.581518e-51 | -8.615850e-47 |
| Msa0354550 | Msa0709790 | 0.815611 | 8.458452e-52 | -8.615850e-47 |
| Msa0354600 | Msa0709790 | 0.802591 | 5.216207e-49 | -8.615850e-47 |
| Msa0357510 | Msa0709790 | 0.808201 | 3.478420e-50 | -8.615850e-47 |
| Msa0364030 | Msa0709790 | -0.819089 | 1.394642e-52 | -8.615850e-47 |
| Msa0491780 | Msa0709790 | 0.805564 | 1.255972e-49 | -8.615850e-47 |
| Msa0493870 | Msa0709790 | 0.814080 | 1.847861e-51 | -8.615850e-47 |
| Msa0496070 | Msa0709790 | 0.810237 | 1.273645e-50 | -8.615850e-47 |
| Msa0510050 | Msa0709790 | 0.839963 | 1.156954e-57 | -8.615850e-47 |
| Msa0516000 | Msa0709790 | -0.822357 | 2.473887e-53 | -8.615850e-47 |
| Msa0523140 | Msa0709790 | -0.800968 | 1.123630e-48 | -8.615850e-47 |
| Msa0524710 | Msa0709790 | 0.830030 | 3.693018e-55 | -8.615850e-47 |
| Msa0525180 | Msa0709790 | -0.807742 | 4.356093e-50 | -8.615850e-47 |
| Msa0531040 | Msa0709790 | 0.812150 | 4.899847e-51 | -8.615850e-47 |
| Msa0531050 | Msa0709790 | 0.806560 | 7.753849e-50 | -8.615850e-47 |
| Msa0537210 | Msa0709790 | 0.808318 | 3.285338e-50 | -8.615850e-47 |
| Msa0545680 | Msa0709790 | 0.800781 | 1.226939e-48 | -8.615850e-47 |
| Msa0550980 | Msa0709790 | -0.815648 | 8.299829e-52 | -8.615850e-47 |
| Msa0550990 | Msa0709790 | -0.802906 | 4.490619e-49 | -8.615850e-47 |
| Msa0554660 | Msa0709790 | 0.806646 | 7.434949e-50 | -8.615850e-47 |
| Msa0554770 | Msa0709790 | -0.826083 | 3.295568e-54 | -8.615850e-47 |
| Msa0557240 | Msa0709790 | 0.802384 | 5.754624e-49 | -8.615850e-47 |
| Msa0557250 | Msa0709790 | 0.800005 | 1.765097e-48 | -8.615850e-47 |
| Msa0557440 | Msa0709790 | -0.801531 | 8.616624e-49 | -8.615850e-47 |
| Msa0559440 | Msa0709790 | -0.812802 | 3.530190e-51 | -8.615850e-47 |
| Msa0559640 | Msa0709790 | -0.826069 | 3.321017e-54 | -8.615850e-47 |
| Msa0561110 | Msa0709790 | 0.809516 | 1.820479e-50 | -8.615850e-47 |
| Msa0561830 | Msa0709790 | 0.818483 | 1.914149e-52 | -8.615850e-47 |
| Msa0567330 | Msa0709790 | 0.822572 | 2.204568e-53 | -8.615850e-47 |
| Msa0567570 | Msa0709790 | 0.834923 | 2.263136e-56 | -8.615850e-47 |
| Msa0568920 | Msa0709790 | 0.801209 | 1.003176e-48 | -8.615850e-47 |
| Msa0576320 | Msa0709790 | 0.817102 | 3.924988e-52 | -8.615850e-47 |
| Msa0580410 | Msa0709790 | -0.800507 | 1.395309e-48 | -8.615850e-47 |
| Msa0580890 | Msa0709790 | -0.813813 | 2.116126e-51 | -8.615850e-47 |
| Msa0587930 | Msa0709790 | 0.816855 | 4.459868e-52 | -8.615850e-47 |
| Msa0594470 | Msa0709790 | 0.830568 | 2.729615e-55 | -8.615850e-47 |
| Msa0597370 | Msa0709790 | -0.806413 | 8.324914e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0709790 | MtrunA17_Chr3g0141701 | 87.179 | 78 | 8 | 2 | 1 | 77 | 46 | 122 | 2.50e-39 | 127 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 20 sgRNAs with CRISPR-Local
Find 19 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATACGGTTGCAGCTGGTGC+TGG | 0.372363 | 5_1:-911626 | None:intergenic |
| TTTGACTTGGACTTGTACTT+TGG | 0.409420 | 5_1:-911735 | None:intergenic |
| CTCATGTATCTTGTTTGACT+TGG | 0.410489 | 5_1:-911748 | None:intergenic |
| ATACGGTTGCAGCTGGTGCT+GGG | 0.483882 | 5_1:-911625 | None:intergenic |
| CAAGTCAGTGGTTGTAGAGC+AGG | 0.484666 | 5_1:+911595 | Msa0709790:CDS |
| CTGCTCTACAACCACTGACT+TGG | 0.511839 | 5_1:-911594 | None:intergenic |
| ACCACTGACTTGGCAGGTGG+CGG | 0.515445 | 5_1:-911584 | None:intergenic |
| TTGTACTTTGGAAGCATCAT+CGG | 0.516399 | 5_1:-911723 | None:intergenic |
| TCTACAACCACTGACTTGGC+AGG | 0.516779 | 5_1:-911590 | None:intergenic |
| ATGAAGGTAAGAAGAATGAT+CGG | 0.544526 | 5_1:+911530 | Msa0709790:CDS |
| TGAAGGTAAGAAGAATGATC+GGG | 0.567599 | 5_1:+911531 | Msa0709790:CDS |
| TGGCAATGGTAATAATGATA+CGG | 0.579053 | 5_1:-911642 | None:intergenic |
| AATAATGATACGGTTGCAGC+TGG | 0.580071 | 5_1:-911632 | None:intergenic |
| ACCGCCACCTGCCAAGTCAG+TGG | 0.586261 | 5_1:+911583 | Msa0709790:CDS |
| TGATTATGATGCGATTGTGA+TGG | 0.609805 | 5_1:-911668 | None:intergenic |
| TGATGCGATTGTGATGGAGT+TGG | 0.619596 | 5_1:-911662 | None:intergenic |
| TACTTTGGAAGCATCATCGG+TGG | 0.630715 | 5_1:-911720 | None:intergenic |
| ACAACCACTGACTTGGCAGG+TGG | 0.640558 | 5_1:-911587 | None:intergenic |
| TACGGTTGCAGCTGGTGCTG+GGG | 0.642249 | 5_1:-911624 | None:intergenic |
| GATTGTGATGGAGTTGGCAA+TGG | 0.656251 | 5_1:-911656 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ATGAAGGTAAGAAGAATGAT+CGG | + | chr5_1:911530-911549 | Msa0709790:CDS | 30.0% | |
| TGGCAATGGTAATAATGATA+CGG | - | chr5_1:911645-911664 | None:intergenic | 30.0% | |
| TGAAGGTAAGAAGAATGATC+GGG | + | chr5_1:911531-911550 | Msa0709790:CDS | 35.0% | |
| TGATTATGATGCGATTGTGA+TGG | - | chr5_1:911671-911690 | None:intergenic | 35.0% | |
| !! | TTGTACTTTGGAAGCATCAT+CGG | - | chr5_1:911726-911745 | None:intergenic | 35.0% |
| !! | TTTGACTTGGACTTGTACTT+TGG | - | chr5_1:911738-911757 | None:intergenic | 35.0% |
| AATAATGATACGGTTGCAGC+TGG | - | chr5_1:911635-911654 | None:intergenic | 40.0% | |
| ! | GATTGTGATGGAGTTGGCAA+TGG | - | chr5_1:911659-911678 | None:intergenic | 45.0% |
| ! | TGATGCGATTGTGATGGAGT+TGG | - | chr5_1:911665-911684 | None:intergenic | 45.0% |
| !! | TACTTTGGAAGCATCATCGG+TGG | - | chr5_1:911723-911742 | None:intergenic | 45.0% |
| !! | TCTACAACCACTGACTTGGC+AGG | - | chr5_1:911593-911612 | None:intergenic | 50.0% |
| ! | CTGCTCTACAACCACTGACT+TGG | - | chr5_1:911597-911616 | None:intergenic | 50.0% |
| CAAGTCAGTGGTTGTAGAGC+AGG | + | chr5_1:911595-911614 | Msa0709790:CDS | 50.0% | |
| !! | ACAACCACTGACTTGGCAGG+TGG | - | chr5_1:911590-911609 | None:intergenic | 55.0% |
| ATACGGTTGCAGCTGGTGCT+GGG | - | chr5_1:911628-911647 | None:intergenic | 55.0% | |
| !! | ACCACTGACTTGGCAGGTGG+CGG | - | chr5_1:911587-911606 | None:intergenic | 60.0% |
| ! | TACGGTTGCAGCTGGTGCTG+GGG | - | chr5_1:911627-911646 | None:intergenic | 60.0% |
| GATACGGTTGCAGCTGGTGC+TGG | - | chr5_1:911629-911648 | None:intergenic | 60.0% | |
| ACCGCCACCTGCCAAGTCAG+TGG | + | chr5_1:911583-911602 | Msa0709790:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 911530 | 911769 | 911530 | ID=Msa0709790;Name=Msa0709790 |
| chr5_1 | mRNA | 911530 | 911769 | 911530 | ID=Msa0709790-mRNA-1;Parent=Msa0709790;Name=Msa0709790-mRNA-1;_AED=0.28;_eAED=0.28;_QI=0|-1|0|1|-1|1|1|0|79 |
| chr5_1 | exon | 911530 | 911769 | 911530 | ID=Msa0709790-mRNA-1:exon:458;Parent=Msa0709790-mRNA-1 |
| chr5_1 | CDS | 911530 | 911769 | 911530 | ID=Msa0709790-mRNA-1:cds;Parent=Msa0709790-mRNA-1 |
| Gene Sequence |
| Protein sequence |
