Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0231710 | XP_003593103.1 | 87.817 | 197 | 7 | 2 | 1 | 180 | 1 | 197 | 6.36e-119 | 344 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0231710 | sp|P43255|CSN8_ARATH | 61.421 | 197 | 59 | 2 | 1 | 180 | 1 | 197 | 1.06e-84 | 251 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0231710 | G7IL66 | 87.817 | 197 | 7 | 2 | 1 | 180 | 1 | 197 | 3.04e-119 | 344 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0032810 | Msa0231710 | 0.824904 | 6.268444e-54 | -8.615850e-47 |
| Msa0068020 | Msa0231710 | 0.803065 | 4.164275e-49 | -8.615850e-47 |
| Msa0077010 | Msa0231710 | 0.808233 | 3.425755e-50 | -8.615850e-47 |
| Msa0126840 | Msa0231710 | 0.813701 | 2.240184e-51 | -8.615850e-47 |
| Msa0128860 | Msa0231710 | 0.801495 | 8.766168e-49 | -8.615850e-47 |
| Msa0165950 | Msa0231710 | 0.820769 | 5.758145e-53 | -8.615850e-47 |
| Msa0166750 | Msa0231710 | 0.811600 | 6.454704e-51 | -8.615850e-47 |
| Msa0167480 | Msa0231710 | 0.841455 | 4.704378e-58 | -8.615850e-47 |
| Msa0174770 | Msa0231710 | 0.801780 | 7.659868e-49 | -8.615850e-47 |
| Msa0180020 | Msa0231710 | 0.829623 | 4.641986e-55 | -8.615850e-47 |
| Msa0187930 | Msa0231710 | 0.833015 | 6.798434e-56 | -8.615850e-47 |
| Msa0194540 | Msa0231710 | 0.827613 | 1.419875e-54 | -8.615850e-47 |
| Msa0219120 | Msa0231710 | 0.807342 | 5.296835e-50 | -8.615850e-47 |
| Msa0226460 | Msa0231710 | 0.806717 | 7.182178e-50 | -8.615850e-47 |
| Msa0231100 | Msa0231710 | 0.819258 | 1.276536e-52 | -8.615850e-47 |
| Msa0231710 | Msa0244780 | 0.834262 | 3.318721e-56 | -8.615850e-47 |
| Msa0231710 | Msa0258850 | 0.803905 | 2.788680e-49 | -8.615850e-47 |
| Msa0231710 | Msa0268130 | 0.820540 | 6.500597e-53 | -8.615850e-47 |
| Msa0231710 | Msa0280430 | 0.807423 | 5.092425e-50 | -8.615850e-47 |
| Msa0231710 | Msa0291520 | 0.804205 | 2.415777e-49 | -8.615850e-47 |
| Msa0231710 | Msa0298200 | 0.806666 | 7.363936e-50 | -8.615850e-47 |
| Msa0231710 | Msa0298990 | 0.822270 | 2.591772e-53 | -8.615850e-47 |
| Msa0231710 | Msa0304590 | 0.814379 | 1.587826e-51 | -8.615850e-47 |
| Msa0231710 | Msa0304660 | 0.817094 | 3.940625e-52 | -8.615850e-47 |
| Msa0231710 | Msa0331700 | 0.818032 | 2.421490e-52 | -8.615850e-47 |
| Msa0231710 | Msa0348830 | 0.808595 | 2.866658e-50 | -8.615850e-47 |
| Msa0231710 | Msa0408240 | -0.810705 | 1.009330e-50 | -8.615850e-47 |
| Msa0231710 | Msa0423750 | 0.804050 | 2.601890e-49 | -8.615850e-47 |
| Msa0231710 | Msa0443390 | 0.833001 | 6.851683e-56 | -8.615850e-47 |
| Msa0231710 | Msa0490820 | 0.822526 | 2.260413e-53 | -8.615850e-47 |
| Msa0231710 | Msa0506400 | 0.801930 | 7.135541e-49 | -8.615850e-47 |
| Msa0231710 | Msa0508590 | 0.800623 | 1.321401e-48 | -8.615850e-47 |
| Msa0231710 | Msa0526540 | 0.837942 | 3.859228e-57 | -8.615850e-47 |
| Msa0231710 | Msa0534750 | 0.843140 | 1.682973e-58 | -8.615850e-47 |
| Msa0231710 | Msa0571920 | 0.814416 | 1.557577e-51 | -8.615850e-47 |
| Msa0231710 | Msa0576940 | 0.848254 | 6.889484e-60 | -8.615850e-47 |
| Msa0231710 | Msa0615580 | 0.817151 | 3.826710e-52 | -8.615850e-47 |
| Msa0231710 | Msa0631250 | 0.802404 | 5.701856e-49 | -8.615850e-47 |
| Msa0231710 | Msa0666230 | 0.811117 | 8.219890e-51 | -8.615850e-47 |
| Msa0231710 | Msa0683780 | 0.803139 | 4.019478e-49 | -8.615850e-47 |
| Msa0231710 | Msa0699190 | 0.823084 | 1.675854e-53 | -8.615850e-47 |
| Msa0231710 | Msa0729200 | 0.824749 | 6.818610e-54 | -8.615850e-47 |
| Msa0231710 | Msa0769590 | 0.830327 | 3.125664e-55 | -8.615850e-47 |
| Msa0231710 | Msa0785130 | 0.804205 | 2.415777e-49 | -8.615850e-47 |
| Msa0231710 | Msa0805500 | 0.809243 | 2.083565e-50 | -8.615850e-47 |
| Msa0231710 | Msa0806880 | 0.841335 | 5.058252e-58 | -8.615850e-47 |
| Msa0231710 | Msa0945480 | 0.823959 | 1.045643e-53 | -8.615850e-47 |
| Msa0231710 | Msa0963020 | 0.802636 | 5.107298e-49 | -8.615850e-47 |
| Msa0231710 | Msa1019240 | 0.841787 | 3.844436e-58 | -8.615850e-47 |
| Msa0231710 | Msa1019260 | 0.824304 | 8.676650e-54 | -8.615850e-47 |
| Msa0231710 | Msa1104140 | 0.807099 | 5.963621e-50 | -8.615850e-47 |
| Msa0231710 | Msa1104210 | 0.840588 | 7.943782e-58 | -8.615850e-47 |
| Msa0231710 | Msa1126850 | 0.805656 | 1.201730e-49 | -8.615850e-47 |
| Msa0231710 | Msa1166860 | 0.801479 | 8.829941e-49 | -8.615850e-47 |
| Msa0231710 | Msa1166870 | 0.851952 | 6.346615e-61 | -8.615850e-47 |
| Msa0231710 | Msa1179980 | 0.808625 | 2.824881e-50 | -8.615850e-47 |
| Msa0231710 | Msa1184370 | 0.803601 | 3.224738e-49 | -8.615850e-47 |
| Msa0231710 | Msa1227690 | 0.819977 | 8.747369e-53 | -8.615850e-47 |
| Msa0231710 | Msa1270620 | 0.802152 | 6.424974e-49 | -8.615850e-47 |
| Msa0231710 | Msa1270690 | 0.804531 | 2.065816e-49 | -8.615850e-47 |
| Msa0231710 | Msa1331710 | 0.818721 | 1.691256e-52 | -8.615850e-47 |
| Msa0231710 | Msa1349570 | 0.839904 | 1.198509e-57 | -8.615850e-47 |
| Msa0231710 | Msa1363330 | 0.834050 | 3.749478e-56 | -8.615850e-47 |
| Msa0231710 | Msa1363860 | 0.807342 | 5.296835e-50 | -8.615850e-47 |
| Msa0231710 | Msa1369190 | 0.842926 | 1.919064e-58 | -8.615850e-47 |
| Msa0231710 | Msa1379760 | 0.812161 | 4.873363e-51 | -8.615850e-47 |
| Msa0231710 | Msa1386600 | 0.834056 | 3.735887e-56 | -8.615850e-47 |
| Msa0231710 | Msa1413500 | 0.841468 | 4.665018e-58 | -8.615850e-47 |
| Msa0231710 | Msa1442850 | 0.810037 | 1.406606e-50 | -8.615850e-47 |
| Msa0231710 | Msa1448690 | 0.822136 | 2.783348e-53 | -8.615850e-47 |
| Msa0231710 | Msa1450280 | 0.840717 | 7.348231e-58 | -8.615850e-47 |
| Msa0231710 | Msa1462860 | 0.827335 | 1.656203e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0231710 | MtrunA17_Chr2g0278401 | 98.148 | 54 | 1 | 0 | 1 | 54 | 1 | 54 | 1.32e-33 | 113 |
| Msa0231710 | MtrunA17_Chr6g0473131 | 74.242 | 66 | 17 | 0 | 50 | 115 | 31 | 96 | 1.52e-29 | 105 |
| Msa0231710 | MtrunA17_Chr2g0278421 | 80.000 | 60 | 12 | 0 | 56 | 115 | 10 | 69 | 2.94e-29 | 103 |
| Msa0231710 | MtrunA17_Chr6g0473111 | 97.826 | 46 | 1 | 0 | 135 | 180 | 4 | 49 | 1.35e-26 | 95.5 |
| Msa0231710 | MtrunA17_Chr6g0473081 | 95.652 | 46 | 2 | 0 | 135 | 180 | 7 | 52 | 5.10e-26 | 94.4 |
| Msa0231710 | MtrunA17_Chr2g0278441 | 95.652 | 46 | 2 | 0 | 135 | 180 | 4 | 49 | 2.15e-25 | 92.4 |
| Msa0231710 | MtrunA17_Chr6g0473121 | 64.151 | 53 | 19 | 0 | 84 | 136 | 8 | 60 | 1.15e-15 | 67.8 |
| Msa0231710 | MtrunA17_Chr2g0278431 | 88.889 | 36 | 4 | 0 | 100 | 135 | 5 | 40 | 2.69e-15 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0231710 | AT4G14110.1 | 61.421 | 197 | 59 | 2 | 1 | 180 | 1 | 197 | 1.07e-85 | 251 |
Find 46 sgRNAs with CRISPR-Local
Find 220 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAGATGTTGCTTTATTTC+TGG | 0.193799 | 2_2:+4001692 | Msa0231710:CDS |
| TCTTCTCTCTTCACAAATAC+TGG | 0.295362 | 2_2:-3999738 | None:intergenic |
| GTCAATGCTGTGTGGAAAAT+TGG | 0.311288 | 2_2:+4000660 | Msa0231710:CDS |
| ATATATGCTATTGATAGTTT+TGG | 0.319353 | 2_2:+4003397 | Msa0231710:three_prime_UTR |
| GCCCTACGCTGTTCATCTTC+TGG | 0.325612 | 2_2:+3999979 | Msa0231710:CDS |
| TTCCACACAGCATTGACTTC+AGG | 0.333842 | 2_2:-4000654 | None:intergenic |
| TAAAGAATATACAGAGTAAC+TGG | 0.346937 | 2_2:-4003568 | None:intergenic |
| GGTATTATTATGTTACTTGT+AGG | 0.349069 | 2_2:+4003612 | Msa0231710:three_prime_UTR |
| CTGCGATAATCTCATGCTTC+AGG | 0.365372 | 2_2:+3999828 | Msa0231710:CDS |
| CAGCTTTGGTTAAGGAACTA+TGG | 0.367151 | 2_2:+4000687 | Msa0231710:CDS |
| GAAGATGTTGCTTTATTTCT+GGG | 0.390251 | 2_2:+4001693 | Msa0231710:CDS |
| GGAAAATTGGTCAACAGCTT+TGG | 0.393816 | 2_2:+4000673 | Msa0231710:CDS |
| TCCACACAGCATTGACTTCA+GGG | 0.423679 | 2_2:-4000653 | None:intergenic |
| TTGCTTTCTTTGATTGAAGA+AGG | 0.437065 | 2_2:-4000630 | None:intergenic |
| TTGGTCAACAGCTTTGGTTA+AGG | 0.451484 | 2_2:+4000679 | Msa0231710:CDS |
| AGTTTCTGCACTGACACAAC+AGG | 0.465172 | 2_2:-4003231 | None:intergenic |
| CACTTTCATACACCTTCAAA+AGG | 0.465645 | 2_2:-4003373 | None:intergenic |
| AACTAAACTAGAAGCAAGTA+AGG | 0.485927 | 2_2:-3999569 | None:intergenic |
| TAACTGGATTTCTCAAAAGC+AGG | 0.486047 | 2_2:-4003552 | None:intergenic |
| AAAAGCTTCAATGCTCAAGA+TGG | 0.504286 | 2_2:-4003293 | None:intergenic |
| TTATTATGTTACTTGTAGGC+GGG | 0.507762 | 2_2:+4003616 | Msa0231710:three_prime_UTR |
| ATTATTATGTTACTTGTAGG+CGG | 0.512198 | 2_2:+4003615 | Msa0231710:three_prime_UTR |
| GTGAAGAGAGAAGAACGTAA+TGG | 0.526736 | 2_2:+3999747 | Msa0231710:exon |
| TCTATCATCGCATCGAATTG+AGG | 0.532761 | 2_2:+3999604 | Msa0231710:five_prime_UTR |
| ATCAGCAGTGAAAACCGCAT+TGG | 0.533670 | 2_2:+3999774 | Msa0231710:CDS |
| CTCACTCAGGTTGCTGCCGA+CGG | 0.541618 | 2_2:+3999935 | Msa0231710:intron |
| TATTATGTTACTTGTAGGCG+GGG | 0.564951 | 2_2:+4003617 | Msa0231710:three_prime_UTR |
| GCCAGAAGATGAACAGCGTA+GGG | 0.573169 | 2_2:-3999980 | None:intergenic |
| TAGATGTACTACAACAAGGT+TGG | 0.575581 | 2_2:+4003166 | Msa0231710:intron |
| GGACCGTGGACAATGCCTCT+CGG | 0.578097 | 2_2:+4003187 | Msa0231710:CDS |
| GTCAGCTGTTGCAATTTGCG+AGG | 0.595780 | 2_2:-4003258 | None:intergenic |
| TTTCATACACCTTCAAAAGG+TGG | 0.602000 | 2_2:-4003370 | None:intergenic |
| AGCCAGAAGATGAACAGCGT+AGG | 0.603390 | 2_2:-3999981 | None:intergenic |
| GAACTATGGTGGAGTGCATG+AGG | 0.608311 | 2_2:+4000701 | Msa0231710:CDS |
| TTTATTTCTGGGAATGAGTG+AGG | 0.610761 | 2_2:+4001704 | Msa0231710:CDS |
| CATCCGAGAGGCATTGTCCA+CGG | 0.629704 | 2_2:-4003190 | None:intergenic |
| GGAGTGCATGAGGCGGTCCG+TGG | 0.631136 | 2_2:+4000711 | Msa0231710:CDS |
| TTCGCTATCATACAAGAGAA+CGG | 0.653770 | 2_2:-4003505 | None:intergenic |
| CTTTGGTTAAGGAACTATGG+TGG | 0.662985 | 2_2:+4000690 | Msa0231710:CDS |
| CTATGGTGGAGTGCATGAGG+CGG | 0.686404 | 2_2:+4000704 | Msa0231710:CDS |
| GTCGTGAAAAGCAACACCGT+CGG | 0.689069 | 2_2:-3999951 | None:intergenic |
| ACCCTGAAGTCAATGCTGTG+TGG | 0.706694 | 2_2:+4000652 | Msa0231710:CDS |
| GTAAGATTTGGATTCCAATG+CGG | 0.707856 | 2_2:-3999788 | None:intergenic |
| ACTACAACAAGGTTGGACCG+TGG | 0.718051 | 2_2:+4003173 | Msa0231710:CDS |
| ATTGTAGATGTACTACAACA+AGG | 0.719816 | 2_2:+4003162 | Msa0231710:intron |
| CTTCACAGTAAGCATCCGAG+AGG | 0.754120 | 2_2:-4003202 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAAATAAATAATGTAGA+TGG | + | chr2_2:4000066-4000085 | Msa0231710:intron | 10.0% |
| !! | GAATAATAAAATTAAGTAGA+GGG | - | chr2_2:4000039-4000058 | None:intergenic | 15.0% |
| !! | TGAATAATAAAATTAAGTAG+AGG | - | chr2_2:4000040-4000059 | None:intergenic | 15.0% |
| !!! | AAGTTAAATTAGTTTAATGT+TGG | + | chr2_2:4000105-4000124 | Msa0231710:intron | 15.0% |
| !!! | TTTGTTTTATAATTGACAAT+AGG | + | chr2_2:4000154-4000173 | Msa0231710:intron | 15.0% |
| !!! | TTTTGAGTTATATTTAAAGA+GGG | - | chr2_2:4001358-4001377 | None:intergenic | 15.0% |
| !! | GATGAATAATATAATTTCTT+TGG | + | chr2_2:4001384-4001403 | Msa0231710:intron | 15.0% |
| !!! | TGGAAATATATGTTTTTTTA+CGG | + | chr2_2:4002408-4002427 | Msa0231710:intron | 15.0% |
| !!! | TTTTACTCATGTCATTTTTT+AGG | + | chr2_2:3999657-3999676 | Msa0231710:intron | 20.0% |
| !!! | TTTGATCTTCACTATATTTT+AGG | + | chr2_2:4000855-4000874 | Msa0231710:intron | 20.0% |
| !! | CAACATTAACAAGATATAAT+GGG | - | chr2_2:4000993-4001012 | None:intergenic | 20.0% |
| !! | ACAACATTAACAAGATATAA+TGG | - | chr2_2:4000994-4001013 | None:intergenic | 20.0% |
| !! | TTCAATAATCAATACATCAA+TGG | - | chr2_2:4001074-4001093 | None:intergenic | 20.0% |
| !!! | CTTTTGAGTTATATTTAAAG+AGG | - | chr2_2:4001359-4001378 | None:intergenic | 20.0% |
| !!! | TTTCAATTTATTTTCTAAGC+AGG | + | chr2_2:4001515-4001534 | Msa0231710:intron | 20.0% |
| !! | TGCATTTATTATAACTTGAT+TGG | + | chr2_2:4001869-4001888 | Msa0231710:intron | 20.0% |
| !! | GCATTTATTATAACTTGATT+GGG | + | chr2_2:4001870-4001889 | Msa0231710:intron | 20.0% |
| !! | CATTTATTATAACTTGATTG+GGG | + | chr2_2:4001871-4001890 | Msa0231710:intron | 20.0% |
| !!! | TCAATCTTTAACTTCTTAAA+TGG | + | chr2_2:4002297-4002316 | Msa0231710:intron | 20.0% |
| !!! | TTCATTCATTTTTTTCCTTT+TGG | - | chr2_2:4002599-4002618 | None:intergenic | 20.0% |
| !! | AAAGGAAAAAAATGAATGAA+AGG | + | chr2_2:4002599-4002618 | Msa0231710:intron | 20.0% |
| !!! | TATTGATTATATTTTGTGCT+TGG | + | chr2_2:4002693-4002712 | Msa0231710:intron | 20.0% |
| !!! | TGCTTGATTAATTTTTCAAA+AGG | - | chr2_2:4003080-4003099 | None:intergenic | 20.0% |
| !! | CTATAATGATATCATAGAAA+GGG | - | chr2_2:4003126-4003145 | None:intergenic | 20.0% |
| !! | TCTATAATGATATCATAGAA+AGG | - | chr2_2:4003127-4003146 | None:intergenic | 20.0% |
| !!! | ATATATGCTATTGATAGTTT+TGG | + | chr2_2:4003397-4003416 | Msa0231710:three_prime_UTR | 20.0% |
| ! | ACGAGTAAAATAATCGAATT+GGG | - | chr2_2:3999699-3999718 | None:intergenic | 25.0% |
| ! | AACGAGTAAAATAATCGAAT+TGG | - | chr2_2:3999700-3999719 | None:intergenic | 25.0% |
| !!! | TTCGATTATTTTACTCGTTT+AGG | + | chr2_2:3999701-3999720 | Msa0231710:intron | 25.0% |
| !!! | TCGATTATTTTACTCGTTTA+GGG | + | chr2_2:3999702-3999721 | Msa0231710:intron | 25.0% |
| ! | TTTATTGTTAATTCTCACTC+AGG | + | chr2_2:3999922-3999941 | Msa0231710:intron | 25.0% |
| !!! | TTTAAGTTGTTTATCCAAAC+AGG | + | chr2_2:4000483-4000502 | Msa0231710:intron | 25.0% |
| !!! | CTTGTAACTTCTTTGATTTT+AGG | + | chr2_2:4000547-4000566 | Msa0231710:intron | 25.0% |
| !! | ATGGGTTATAATAAAAGCAA+CGG | - | chr2_2:4000975-4000994 | None:intergenic | 25.0% |
| ! | TATTGAATCTGTAGTATTGT+TGG | + | chr2_2:4001087-4001106 | Msa0231710:intron | 25.0% |
| ! | AAGTGGCTAAAAATTGTTAT+TGG | + | chr2_2:4001168-4001187 | Msa0231710:intron | 25.0% |
| ! | AACATTGCAAAAAGTTGAAT+TGG | + | chr2_2:4001256-4001275 | Msa0231710:intron | 25.0% |
| ! | AGTGTAATATAGTTTGAACT+TGG | + | chr2_2:4001293-4001312 | Msa0231710:intron | 25.0% |
| ! | GTGTAATATAGTTTGAACTT+GGG | + | chr2_2:4001294-4001313 | Msa0231710:intron | 25.0% |
| !! | ACTAAATTTTATGTGATCCA+TGG | - | chr2_2:4001435-4001454 | None:intergenic | 25.0% |
| ! | CTTTCATTAATTACATCATG+TGG | - | chr2_2:4002207-4002226 | None:intergenic | 25.0% |
| ! | ATATTAGTGTCTCACTTTAT+TGG | + | chr2_2:4002329-4002348 | Msa0231710:intron | 25.0% |
| ! | TATTAGTGTCTCACTTTATT+GGG | + | chr2_2:4002330-4002349 | Msa0231710:intron | 25.0% |
| !!! | ATTTAAGGTGGTTTGTTTTT+GGG | + | chr2_2:4002358-4002377 | Msa0231710:intron | 25.0% |
| ! | GAAGGAAATAGAATGAATAT+TGG | + | chr2_2:4002514-4002533 | Msa0231710:intron | 25.0% |
| ! | AAAATGGAGGAGAAAATAAT+GGG | + | chr2_2:4002565-4002584 | Msa0231710:intron | 25.0% |
| ! | TGATAATATTAGATAGTGCA+GGG | - | chr2_2:4002634-4002653 | None:intergenic | 25.0% |
| !!! | TATTGATAGTTTTGGAAACA+AGG | + | chr2_2:4003405-4003424 | Msa0231710:three_prime_UTR | 25.0% |
| ! | TAAAGAATATACAGAGTAAC+TGG | - | chr2_2:4003571-4003590 | None:intergenic | 25.0% |
| !!! | GTACAGTGAATATTTTTTCA+TGG | + | chr2_2:4003591-4003610 | Msa0231710:three_prime_UTR | 25.0% |
| !! | GGTATTATTATGTTACTTGT+AGG | + | chr2_2:4003612-4003631 | Msa0231710:three_prime_UTR | 25.0% |
| !! | ATTATTATGTTACTTGTAGG+CGG | + | chr2_2:4003615-4003634 | Msa0231710:three_prime_UTR | 25.0% |
| AACTAAACTAGAAGCAAGTA+AGG | - | chr2_2:3999572-3999591 | None:intergenic | 30.0% | |
| ! | AGCAATTTTGTCGTAAGATT+TGG | - | chr2_2:3999803-3999822 | None:intergenic | 30.0% |
| TCACAAATGCTAATGTAAGT+AGG | - | chr2_2:4000207-4000226 | None:intergenic | 30.0% | |
| GAGACTATTTGGTAGATTTA+TGG | + | chr2_2:4000273-4000292 | Msa0231710:intron | 30.0% | |
| ACAACTTATAGACATGTCAT+AGG | - | chr2_2:4000305-4000324 | None:intergenic | 30.0% | |
| TTTCATTTCATAAGCAATCC+CGG | - | chr2_2:4000352-4000371 | None:intergenic | 30.0% | |
| TTGCTTTCTTTGATTGAAGA+AGG | - | chr2_2:4000633-4000652 | None:intergenic | 30.0% | |
| GTATTTAGTGTTCAAGATAG+TGG | + | chr2_2:4001124-4001143 | Msa0231710:intron | 30.0% | |
| !! | CATGTTGCTTTAGTATGTTA+TGG | + | chr2_2:4001228-4001247 | Msa0231710:intron | 30.0% |
| TTGCTTTAGTATGTTATGGA+TGG | + | chr2_2:4001232-4001251 | Msa0231710:intron | 30.0% | |
| !! | AGTGATTGATCACTTGTTTT+TGG | + | chr2_2:4001323-4001342 | Msa0231710:intron | 30.0% |
| !! | AAGTTCTGGAAAAAGCATAT+TGG | - | chr2_2:4001619-4001638 | None:intergenic | 30.0% |
| ! | TTTTCCAGAACTTTACACAA+AGG | + | chr2_2:4001626-4001645 | Msa0231710:intron | 30.0% |
| !! | TGAAGATGTTGCTTTATTTC+TGG | + | chr2_2:4001692-4001711 | Msa0231710:CDS | 30.0% |
| !! | GAAGATGTTGCTTTATTTCT+GGG | + | chr2_2:4001693-4001712 | Msa0231710:CDS | 30.0% |
| AACATTGTTTATGATGCAAG+AGG | - | chr2_2:4001802-4001821 | None:intergenic | 30.0% | |
| !! | ATAAATGCATTGATTGCTTG+TGG | - | chr2_2:4001858-4001877 | None:intergenic | 30.0% |
| AGATGAAGTTCATTAATGCT+CGG | + | chr2_2:4001916-4001935 | Msa0231710:intron | 30.0% | |
| TGGAATATAACAAGGAGAAT+TGG | - | chr2_2:4002061-4002080 | None:intergenic | 30.0% | |
| AGCAATAAGAGAATCTTCTA+AGG | + | chr2_2:4002170-4002189 | Msa0231710:intron | 30.0% | |
| CTTTATTGGGTTTGGATTTA+AGG | + | chr2_2:4002343-4002362 | Msa0231710:intron | 30.0% | |
| !!! | GATTTAAGGTGGTTTGTTTT+TGG | + | chr2_2:4002357-4002376 | Msa0231710:intron | 30.0% |
| AAACATATATTTCCAAACCG+TGG | - | chr2_2:4002403-4002422 | None:intergenic | 30.0% | |
| GAAAATGGAGGAGAAAATAA+TGG | + | chr2_2:4002564-4002583 | Msa0231710:intron | 30.0% | |
| AAATGGAGGAGAAAATAATG+GGG | + | chr2_2:4002566-4002585 | Msa0231710:intron | 30.0% | |
| CTGATAATATTAGATAGTGC+AGG | - | chr2_2:4002635-4002654 | None:intergenic | 30.0% | |
| !! | ATTGGCATTTGATGATGAAT+TGG | + | chr2_2:4002764-4002783 | Msa0231710:intron | 30.0% |
| ATTGTAGATGTACTACAACA+AGG | + | chr2_2:4003162-4003181 | Msa0231710:intron | 30.0% | |
| ! | CTGATTAGATGAATTTTGCA+TGG | + | chr2_2:4003458-4003477 | Msa0231710:three_prime_UTR | 30.0% |
| ! | TTATTATGTTACTTGTAGGC+GGG | + | chr2_2:4003616-4003635 | Msa0231710:three_prime_UTR | 30.0% |
| TGAGGTATGAATGCAAAGTT+TGG | + | chr2_2:3999622-3999641 | Msa0231710:intron | 35.0% | |
| TCTTCTCTCTTCACAAATAC+TGG | - | chr2_2:3999741-3999760 | None:intergenic | 35.0% | |
| GTAAGATTTGGATTCCAATG+CGG | - | chr2_2:3999791-3999810 | None:intergenic | 35.0% | |
| GTTTATTTCCATAAGCTCTC+CGG | + | chr2_2:4000330-4000349 | Msa0231710:intron | 35.0% | |
| TTTATTTCCATAAGCTCTCC+GGG | + | chr2_2:4000331-4000350 | Msa0231710:intron | 35.0% | |
| ATCTCCTTTGTGTAAAGTTC+TGG | - | chr2_2:4001633-4001652 | None:intergenic | 35.0% | |
| !! | TTTATTTCTGGGAATGAGTG+AGG | + | chr2_2:4001704-4001723 | Msa0231710:CDS | 35.0% |
| ! | AGGACTATTTTCAGTTCCAA+GGG | - | chr2_2:4001962-4001981 | None:intergenic | 35.0% |
| ! | AAGGACTATTTTCAGTTCCA+AGG | - | chr2_2:4001963-4001982 | None:intergenic | 35.0% |
| TATCCAAGTGCAAGATTCAA+AGG | - | chr2_2:4001982-4002001 | None:intergenic | 35.0% | |
| CACAATGTGTTCAATGAAAG+TGG | + | chr2_2:4002032-4002051 | Msa0231710:intron | 35.0% | |
| AGTAGATATATTGACAGCAG+TGG | - | chr2_2:4002086-4002105 | None:intergenic | 35.0% | |
| CCAACATATATGTCACTAAC+AGG | - | chr2_2:4002252-4002271 | None:intergenic | 35.0% | |
| CCTGTTAGTGACATATATGT+TGG | + | chr2_2:4002249-4002268 | Msa0231710:intron | 35.0% | |
| TATTGGGTTTGGATTTAAGG+TGG | + | chr2_2:4002346-4002365 | Msa0231710:intron | 35.0% | |
| TATTGACACTGTAGAAACCA+CGG | + | chr2_2:4002383-4002402 | Msa0231710:intron | 35.0% | |
| GTATCTGACAAGTTTACACT+TGG | + | chr2_2:4002476-4002495 | Msa0231710:intron | 35.0% | |
| ACAAGTTTACACTTGGAATG+AGG | + | chr2_2:4002483-4002502 | Msa0231710:intron | 35.0% | |
| AATGGAGGAGAAAATAATGG+GGG | + | chr2_2:4002567-4002586 | Msa0231710:intron | 35.0% | |
| ! | ATCCAAGTTCTACTGTTTCT+AGG | - | chr2_2:4002674-4002693 | None:intergenic | 35.0% |
| !! | GCCAATTATCACGTTGATTT+GGG | - | chr2_2:4002750-4002769 | None:intergenic | 35.0% |
| ! | TGCCAATTATCACGTTGATT+TGG | - | chr2_2:4002751-4002770 | None:intergenic | 35.0% |
| !! | GTTGCAAGTTGACATCATTT+TGG | - | chr2_2:4002884-4002903 | None:intergenic | 35.0% |
| ATGTCAACTTGCAACTGTAT+AGG | + | chr2_2:4002889-4002908 | Msa0231710:intron | 35.0% | |
| ACTATAACTCTGTAGTGTAG+CGG | + | chr2_2:4002913-4002932 | Msa0231710:intron | 35.0% | |
| !! | TTGTAGATGGTGGAAAATAG+TGG | - | chr2_2:4002951-4002970 | None:intergenic | 35.0% |
| ATTGACAACACTGGTCAATA+TGG | + | chr2_2:4002970-4002989 | Msa0231710:intron | 35.0% | |
| CTACTAACAATGAGCTATCT+TGG | + | chr2_2:4003016-4003035 | Msa0231710:intron | 35.0% | |
| AAATAAGACTACACAAGCAG+AGG | - | chr2_2:4003051-4003070 | None:intergenic | 35.0% | |
| TATCATAGAAAGGGAAGAGA+TGG | - | chr2_2:4003117-4003136 | None:intergenic | 35.0% | |
| TAGATGTACTACAACAAGGT+TGG | + | chr2_2:4003166-4003185 | Msa0231710:intron | 35.0% | |
| AAAAGCTTCAATGCTCAAGA+TGG | - | chr2_2:4003296-4003315 | None:intergenic | 35.0% | |
| !!! | TGAAGCTTTTAGTCTTGTGA+AGG | + | chr2_2:4003306-4003325 | Msa0231710:exon | 35.0% |
| TTTCATACACCTTCAAAAGG+TGG | - | chr2_2:4003373-4003392 | None:intergenic | 35.0% | |
| CACTTTCATACACCTTCAAA+AGG | - | chr2_2:4003376-4003395 | None:intergenic | 35.0% | |
| TTCGCTATCATACAAGAGAA+CGG | - | chr2_2:4003508-4003527 | None:intergenic | 35.0% | |
| TAACTGGATTTCTCAAAAGC+AGG | - | chr2_2:4003555-4003574 | None:intergenic | 35.0% | |
| ! | TATTATGTTACTTGTAGGCG+GGG | + | chr2_2:4003617-4003636 | Msa0231710:three_prime_UTR | 35.0% |
| TCTATCATCGCATCGAATTG+AGG | + | chr2_2:3999604-3999623 | Msa0231710:five_prime_UTR | 40.0% | |
| GTGAAGAGAGAAGAACGTAA+TGG | + | chr2_2:3999747-3999766 | Msa0231710:exon | 40.0% | |
| TAAACAAGTCCAACCCAATC+GGG | - | chr2_2:4000236-4000255 | None:intergenic | 40.0% | |
| GTAAACAAGTCCAACCCAAT+CGG | - | chr2_2:4000237-4000256 | None:intergenic | 40.0% | |
| TCTACCAAATAGTCTCGCAA+GGG | - | chr2_2:4000269-4000288 | None:intergenic | 40.0% | |
| ATCTACCAAATAGTCTCGCA+AGG | - | chr2_2:4000270-4000289 | None:intergenic | 40.0% | |
| ! | TCCAAACAGGACCAGTATTT+TGG | + | chr2_2:4000496-4000515 | Msa0231710:intron | 40.0% |
| TCCAAAATACTGGTCCTGTT+TGG | - | chr2_2:4000500-4000519 | None:intergenic | 40.0% | |
| !! | AACAGGACCAGTATTTTGGA+AGG | + | chr2_2:4000500-4000519 | Msa0231710:intron | 40.0% |
| !! | ACAGGACCAGTATTTTGGAA+GGG | + | chr2_2:4000501-4000520 | Msa0231710:intron | 40.0% |
| !! | ACCAGTATTTTGGAAGGGAT+GGG | + | chr2_2:4000506-4000525 | Msa0231710:intron | 40.0% |
| GTCAATGCTGTGTGGAAAAT+TGG | + | chr2_2:4000660-4000679 | Msa0231710:CDS | 40.0% | |
| GGAAAATTGGTCAACAGCTT+TGG | + | chr2_2:4000673-4000692 | Msa0231710:CDS | 40.0% | |
| ! | TTGGTCAACAGCTTTGGTTA+AGG | + | chr2_2:4000679-4000698 | Msa0231710:CDS | 40.0% |
| ! | CAGCTTTGGTTAAGGAACTA+TGG | + | chr2_2:4000687-4000706 | Msa0231710:CDS | 40.0% |
| CTTTGGTTAAGGAACTATGG+TGG | + | chr2_2:4000690-4000709 | Msa0231710:CDS | 40.0% | |
| AGAAAGCAGAAATGAAGCCT+TGG | - | chr2_2:4000758-4000777 | None:intergenic | 40.0% | |
| AAAGTAAGCCATTTCTGCGT+GGG | + | chr2_2:4001036-4001055 | Msa0231710:intron | 40.0% | |
| ! | AAGATAGTGGCATGTTGCTA+TGG | + | chr2_2:4001137-4001156 | Msa0231710:intron | 40.0% |
| TTGCTATGGATGGAAACAAG+TGG | + | chr2_2:4001151-4001170 | Msa0231710:intron | 40.0% | |
| CCTTCATCGACATTACATGT+TGG | - | chr2_2:4001410-4001429 | None:intergenic | 40.0% | |
| CCAACATGTAATGTCGATGA+AGG | + | chr2_2:4001407-4001426 | Msa0231710:intron | 40.0% | |
| GCAATTGCAGAAGTTATTGC+AGG | - | chr2_2:4001477-4001496 | None:intergenic | 40.0% | |
| AGTCCTTTGAATCTTGCACT+TGG | + | chr2_2:4001976-4001995 | Msa0231710:intron | 40.0% | |
| CAGTGGCATGGAATATAACA+AGG | - | chr2_2:4002069-4002088 | None:intergenic | 40.0% | |
| ATATATTGACAGCAGTGGCA+TGG | - | chr2_2:4002081-4002100 | None:intergenic | 40.0% | |
| ATTACATCATGTGGCACATG+AGG | - | chr2_2:4002198-4002217 | None:intergenic | 40.0% | |
| GTGTCTCACTTTATTGGGTT+TGG | + | chr2_2:4002335-4002354 | Msa0231710:intron | 40.0% | |
| TGGAATGAGGAGAAAAGAGA+AGG | + | chr2_2:4002496-4002515 | Msa0231710:intron | 40.0% | |
| CAATTCAAGAAGTCAGTCAG+TGG | + | chr2_2:4002542-4002561 | Msa0231710:intron | 40.0% | |
| AGAAGTCAGTCAGTGGAAAA+TGG | + | chr2_2:4002549-4002568 | Msa0231710:intron | 40.0% | |
| !! | GTTCTACTGTTTCTAGGAGA+GGG | - | chr2_2:4002668-4002687 | None:intergenic | 40.0% |
| !! | AGTTCTACTGTTTCTAGGAG+AGG | - | chr2_2:4002669-4002688 | None:intergenic | 40.0% |
| CTCCTAGAAACAGTAGAACT+TGG | + | chr2_2:4002669-4002688 | Msa0231710:intron | 40.0% | |
| GCCCAAATCAACGTGATAAT+TGG | + | chr2_2:4002746-4002765 | Msa0231710:intron | 40.0% | |
| !! | GAATTGGTGTTGTCATTCAG+CGG | + | chr2_2:4002780-4002799 | Msa0231710:intron | 40.0% |
| GTCAAAATTCCGCCAAGTTA+TGG | - | chr2_2:4002825-4002844 | None:intergenic | 40.0% | |
| GTGTTGTCAATTGTAGATGG+TGG | - | chr2_2:4002961-4002980 | None:intergenic | 40.0% | |
| CCAGTGTTGTCAATTGTAGA+TGG | - | chr2_2:4002964-4002983 | None:intergenic | 40.0% | |
| CCATCTACAATTGACAACAC+TGG | + | chr2_2:4002961-4002980 | Msa0231710:intron | 40.0% | |
| ! | TGAATTTTGCATGGCACTTC+TGG | + | chr2_2:4003467-4003486 | Msa0231710:three_prime_UTR | 40.0% |
| ATCAGCAGTGAAAACCGCAT+TGG | + | chr2_2:3999774-3999793 | Msa0231710:CDS | 45.0% | |
| CTGCGATAATCTCATGCTTC+AGG | + | chr2_2:3999828-3999847 | Msa0231710:CDS | 45.0% | |
| !!! | GTGTTGCTTTTCACGACGAA+TGG | + | chr2_2:3999957-3999976 | Msa0231710:CDS | 45.0% |
| ATTTGTGAGACTTGCCCGAT+TGG | + | chr2_2:4000219-4000238 | Msa0231710:intron | 45.0% | |
| TTTGTGAGACTTGCCCGATT+GGG | + | chr2_2:4000220-4000239 | Msa0231710:intron | 45.0% | |
| TAAGCCCTTGCGAGACTATT+TGG | + | chr2_2:4000262-4000281 | Msa0231710:intron | 45.0% | |
| !! | GACCAGTATTTTGGAAGGGA+TGG | + | chr2_2:4000505-4000524 | Msa0231710:intron | 45.0% |
| !! | CCAGTATTTTGGAAGGGATG+GGG | + | chr2_2:4000507-4000526 | Msa0231710:intron | 45.0% |
| !! | TATTTTGGAAGGGATGGGGT+TGG | + | chr2_2:4000511-4000530 | Msa0231710:intron | 45.0% |
| ! | GCAACAGTGCTCGTTTTCTA+TGG | + | chr2_2:4000598-4000617 | Msa0231710:intron | 45.0% |
| !! | TCCACACAGCATTGACTTCA+GGG | - | chr2_2:4000656-4000675 | None:intergenic | 45.0% |
| !! | TTCCACACAGCATTGACTTC+AGG | - | chr2_2:4000657-4000676 | None:intergenic | 45.0% |
| GAAATGAAGCCTTGGAGTTC+TGG | - | chr2_2:4000750-4000769 | None:intergenic | 45.0% | |
| GGCTTCATTTCTGCTTTCTC+AGG | + | chr2_2:4000759-4000778 | Msa0231710:intron | 45.0% | |
| GAAAGTAAGCCATTTCTGCG+TGG | + | chr2_2:4001035-4001054 | Msa0231710:intron | 45.0% | |
| TAGTGGCATGTTGCTATGGA+TGG | + | chr2_2:4001141-4001160 | Msa0231710:intron | 45.0% | |
| !! | TAATGTCGATGAAGGTGCCA+TGG | + | chr2_2:4001415-4001434 | Msa0231710:intron | 45.0% |
| TGCAGAAGTTATTGCAGGAG+TGG | - | chr2_2:4001472-4001491 | None:intergenic | 45.0% | |
| ACACTGTAGAAACCACGGTT+TGG | + | chr2_2:4002388-4002407 | Msa0231710:intron | 45.0% | |
| GAGAGCAGTTGCTGAATTTG+AGG | + | chr2_2:4002430-4002449 | Msa0231710:intron | 45.0% | |
| AGTCAGTCAGTGGAAAATGG+AGG | + | chr2_2:4002552-4002571 | Msa0231710:intron | 45.0% | |
| ! | GAGGAGAAAATAATGGGGGT+GGG | + | chr2_2:4002571-4002590 | Msa0231710:intron | 45.0% |
| GGTGCTTTAGTGCCATAACT+TGG | + | chr2_2:4002810-4002829 | Msa0231710:intron | 45.0% | |
| GCTTTAGTGCCATAACTTGG+CGG | + | chr2_2:4002813-4002832 | Msa0231710:intron | 45.0% | |
| ACAACACTGGTCAATATGGC+AGG | + | chr2_2:4002974-4002993 | Msa0231710:intron | 45.0% | |
| ! | AGTTTCTGCACTGACACAAC+AGG | - | chr2_2:4003234-4003253 | None:intergenic | 45.0% |
| ! | TCACGTGATCCACCTTTTGA+AGG | + | chr2_2:4003361-4003380 | Msa0231710:three_prime_UTR | 45.0% |
| GTCGTGAAAAGCAACACCGT+CGG | - | chr2_2:3999954-3999973 | None:intergenic | 50.0% | |
| GCCAGAAGATGAACAGCGTA+GGG | - | chr2_2:3999983-4000002 | None:intergenic | 50.0% | |
| AGCCAGAAGATGAACAGCGT+AGG | - | chr2_2:3999984-4000003 | None:intergenic | 50.0% | |
| AAGCAATCCCGGAGAGCTTA+TGG | - | chr2_2:4000341-4000360 | None:intergenic | 50.0% | |
| CCCCATCCCTTCCAAAATAC+TGG | - | chr2_2:4000510-4000529 | None:intergenic | 50.0% | |
| ACCCTGAAGTCAATGCTGTG+TGG | + | chr2_2:4000652-4000671 | Msa0231710:CDS | 50.0% | |
| ! | GAACTATGGTGGAGTGCATG+AGG | + | chr2_2:4000701-4000720 | Msa0231710:CDS | 50.0% |
| CTGGACTCCACTCAAAACCA+CGG | - | chr2_2:4000731-4000750 | None:intergenic | 50.0% | |
| TATCCTTTCTCGACGACCCT+TGG | + | chr2_2:4001943-4001962 | Msa0231710:intron | 50.0% | |
| ! | GGAGGAGAAAATAATGGGGG+TGG | + | chr2_2:4002570-4002589 | Msa0231710:intron | 50.0% |
| TAATGGGGGTGGGAACCAAA+AGG | + | chr2_2:4002581-4002600 | Msa0231710:intron | 50.0% | |
| TTGTCATTCAGCGGCTATCG+TGG | + | chr2_2:4002789-4002808 | Msa0231710:intron | 50.0% | |
| GACTTAATCGCGTATCGCTG+GGG | - | chr2_2:4002862-4002881 | None:intergenic | 50.0% | |
| GGACTTAATCGCGTATCGCT+GGG | - | chr2_2:4002863-4002882 | None:intergenic | 50.0% | |
| TGGACTTAATCGCGTATCGC+TGG | - | chr2_2:4002864-4002883 | None:intergenic | 50.0% | |
| ACTACAACAAGGTTGGACCG+TGG | + | chr2_2:4003173-4003192 | Msa0231710:CDS | 50.0% | |
| CTTCACAGTAAGCATCCGAG+AGG | - | chr2_2:4003205-4003224 | None:intergenic | 50.0% | |
| GTCAGCTGTTGCAATTTGCG+AGG | - | chr2_2:4003261-4003280 | None:intergenic | 50.0% | |
| GCCCTACGCTGTTCATCTTC+TGG | + | chr2_2:3999979-3999998 | Msa0231710:CDS | 55.0% | |
| TGAGACTTGCCCGATTGGGT+TGG | + | chr2_2:4000224-4000243 | Msa0231710:intron | 55.0% | |
| ! | CTATGGTGGAGTGCATGAGG+CGG | + | chr2_2:4000704-4000723 | Msa0231710:CDS | 55.0% |
| GAGTGGAGTCCAGAACTCCA+AGG | + | chr2_2:4000738-4000757 | Msa0231710:intron | 55.0% | |
| GTGATCGTCCCACGCAGAAA+TGG | - | chr2_2:4001047-4001066 | None:intergenic | 55.0% | |
| GGGTCGTCGAGAAAGGATAG+AGG | - | chr2_2:4001942-4001961 | None:intergenic | 55.0% | |
| GTTCCAAGGGTCGTCGAGAA+AGG | - | chr2_2:4001949-4001968 | None:intergenic | 55.0% | |
| GTATCGCTGGGGAGCAATAG+CGG | - | chr2_2:4002851-4002870 | None:intergenic | 55.0% | |
| CACTGGTCAATATGGCAGGC+TGG | + | chr2_2:4002978-4002997 | Msa0231710:intron | 55.0% | |
| !! | CATCCGAGAGGCATTGTCCA+CGG | - | chr2_2:4003193-4003212 | None:intergenic | 55.0% |
| ! | CTCACTCAGGTTGCTGCCGA+CGG | + | chr2_2:3999935-3999954 | Msa0231710:intron | 60.0% |
| !!! | AGGCGGTCCGTGGTTTTGAG+TGG | + | chr2_2:4000721-4000740 | Msa0231710:intron | 60.0% |
| GGACCGTGGACAATGCCTCT+CGG | + | chr2_2:4003187-4003206 | Msa0231710:CDS | 60.0% | |
| GGAGTGCATGAGGCGGTCCG+TGG | + | chr2_2:4000711-4000730 | Msa0231710:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 3999521 | 4003650 | 3999521 | ID=Msa0231710;Name=Msa0231710 |
| chr2_2 | mRNA | 3999521 | 4003650 | 3999521 | ID=Msa0231710-mRNA-1;Parent=Msa0231710;Name=Msa0231710-mRNA-1;_AED=0.41;_eAED=0.41;_QI=148|0.6|0.66|1|0.4|0.33|6|342|180 |
| chr2_2 | exon | 3999521 | 3999625 | 3999521 | ID=Msa0231710-mRNA-1:exon:1643;Parent=Msa0231710-mRNA-1 |
| chr2_2 | exon | 3999723 | 3999849 | 3999723 | ID=Msa0231710-mRNA-1:exon:1644;Parent=Msa0231710-mRNA-1 |
| chr2_2 | exon | 3999944 | 4000023 | 3999944 | ID=Msa0231710-mRNA-1:exon:1645;Parent=Msa0231710-mRNA-1 |
| chr2_2 | exon | 4000599 | 4000732 | 4000599 | ID=Msa0231710-mRNA-1:exon:1646;Parent=Msa0231710-mRNA-1 |
| chr2_2 | exon | 4001634 | 4001738 | 4001634 | ID=Msa0231710-mRNA-1:exon:1647;Parent=Msa0231710-mRNA-1 |
| chr2_2 | exon | 4003169 | 4003650 | 4003169 | ID=Msa0231710-mRNA-1:exon:1648;Parent=Msa0231710-mRNA-1 |
| chr2_2 | five_prime_UTR | 3999521 | 3999625 | 3999521 | ID=Msa0231710-mRNA-1:five_prime_utr;Parent=Msa0231710-mRNA-1 |
| chr2_2 | five_prime_UTR | 3999723 | 3999765 | 3999723 | ID=Msa0231710-mRNA-1:five_prime_utr;Parent=Msa0231710-mRNA-1 |
| chr2_2 | CDS | 3999766 | 3999849 | 3999766 | ID=Msa0231710-mRNA-1:cds;Parent=Msa0231710-mRNA-1 |
| chr2_2 | CDS | 3999944 | 4000023 | 3999944 | ID=Msa0231710-mRNA-1:cds;Parent=Msa0231710-mRNA-1 |
| chr2_2 | CDS | 4000599 | 4000732 | 4000599 | ID=Msa0231710-mRNA-1:cds;Parent=Msa0231710-mRNA-1 |
| chr2_2 | CDS | 4001634 | 4001738 | 4001634 | ID=Msa0231710-mRNA-1:cds;Parent=Msa0231710-mRNA-1 |
| chr2_2 | CDS | 4003169 | 4003308 | 4003169 | ID=Msa0231710-mRNA-1:cds;Parent=Msa0231710-mRNA-1 |
| chr2_2 | three_prime_UTR | 4003309 | 4003650 | 4003309 | ID=Msa0231710-mRNA-1:three_prime_utr;Parent=Msa0231710-mRNA-1 |
| Gene Sequence |
| Protein sequence |
