Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0429170 | XP_024635234.1 | 96.523 | 604 | 20 | 1 | 1 | 604 | 1 | 603 | 0.0 | 1206 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0429170 | sp|Q8L7W1|MSL3_ARATH | 55.470 | 521 | 212 | 5 | 77 | 583 | 66 | 580 | 0.0 | 578 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0429170 | A0A396IZX7 | 96.523 | 604 | 20 | 1 | 1 | 604 | 1 | 603 | 0.0 | 1206 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015100 | Msa0429170 | 0.813240 | 2.829493e-51 | -8.615850e-47 |
| Msa0045780 | Msa0429170 | 0.812322 | 4.494145e-51 | -8.615850e-47 |
| Msa0046150 | Msa0429170 | 0.817374 | 3.409365e-52 | -8.615850e-47 |
| Msa0049770 | Msa0429170 | 0.804619 | 1.980396e-49 | -8.615850e-47 |
| Msa0051100 | Msa0429170 | 0.812954 | 3.268992e-51 | -8.615850e-47 |
| Msa0071550 | Msa0429170 | 0.804583 | 2.015213e-49 | -8.615850e-47 |
| Msa0088550 | Msa0429170 | 0.822398 | 2.419619e-53 | -8.615850e-47 |
| Msa0093440 | Msa0429170 | 0.804763 | 1.848048e-49 | -8.615850e-47 |
| Msa0094940 | Msa0429170 | -0.821566 | 3.770977e-53 | -8.615850e-47 |
| Msa0101650 | Msa0429170 | 0.802943 | 4.413931e-49 | -8.615850e-47 |
| Msa0135360 | Msa0429170 | 0.822278 | 2.580526e-53 | -8.615850e-47 |
| Msa0179860 | Msa0429170 | 0.819240 | 1.288256e-52 | -8.615850e-47 |
| Msa0200870 | Msa0429170 | 0.809845 | 1.546804e-50 | -8.615850e-47 |
| Msa0226620 | Msa0429170 | -0.822482 | 2.313614e-53 | -8.615850e-47 |
| Msa0379820 | Msa0429170 | 0.968461 | 1.039679e-128 | -8.615850e-47 |
| Msa0379850 | Msa0429170 | 0.975332 | 9.264581e-140 | -8.615850e-47 |
| Msa0411000 | Msa0429170 | 0.852790 | 3.662977e-61 | -8.615850e-47 |
| Msa0419620 | Msa0429170 | -0.837947 | 3.847736e-57 | -8.615850e-47 |
| Msa0429170 | Msa0438050 | 0.804591 | 2.006696e-49 | -8.615850e-47 |
| Msa0429170 | Msa0454940 | 0.824637 | 7.246197e-54 | -8.615850e-47 |
| Msa0429170 | Msa0455230 | 0.856870 | 2.401896e-62 | -8.615850e-47 |
| Msa0429170 | Msa0465680 | -0.816529 | 5.277599e-52 | -8.615850e-47 |
| Msa0429170 | Msa0467740 | -0.824407 | 8.210386e-54 | -8.615850e-47 |
| Msa0429170 | Msa0475730 | 0.897149 | 1.860001e-76 | -8.615850e-47 |
| Msa0429170 | Msa0502910 | 0.840746 | 7.220313e-58 | -8.615850e-47 |
| Msa0429170 | Msa0511720 | -0.802497 | 5.455202e-49 | -8.615850e-47 |
| Msa0429170 | Msa0514130 | -0.827242 | 1.743587e-54 | -8.615850e-47 |
| Msa0429170 | Msa0516310 | 0.818148 | 2.279723e-52 | -8.615850e-47 |
| Msa0429170 | Msa0527250 | 0.802203 | 6.271964e-49 | -8.615850e-47 |
| Msa0429170 | Msa0543900 | 0.830521 | 2.802234e-55 | -8.615850e-47 |
| Msa0429170 | Msa0544930 | 0.810116 | 1.352477e-50 | -8.615850e-47 |
| Msa0429170 | Msa0563140 | 0.813639 | 2.311343e-51 | -8.615850e-47 |
| Msa0429170 | Msa0564490 | 0.812912 | 3.338697e-51 | -8.615850e-47 |
| Msa0429170 | Msa0599770 | 0.819513 | 1.116779e-52 | -8.615850e-47 |
| Msa0429170 | Msa0639030 | 0.807906 | 4.019698e-50 | -8.615850e-47 |
| Msa0429170 | Msa0640380 | 0.848518 | 5.823369e-60 | -8.615850e-47 |
| Msa0429170 | Msa0641020 | 0.827283 | 1.704504e-54 | -8.615850e-47 |
| Msa0429170 | Msa0641030 | 0.811251 | 7.686707e-51 | -8.615850e-47 |
| Msa0429170 | Msa0656270 | 0.819816 | 9.520298e-53 | -8.615850e-47 |
| Msa0429170 | Msa0663330 | 0.809518 | 1.818377e-50 | -8.615850e-47 |
| Msa0429170 | Msa0664020 | 0.820497 | 6.647040e-53 | -8.615850e-47 |
| Msa0429170 | Msa0678820 | 0.823017 | 1.736739e-53 | -8.615850e-47 |
| Msa0429170 | Msa0697200 | 0.806080 | 9.785025e-50 | -8.615850e-47 |
| Msa0429170 | Msa0697600 | 0.805585 | 1.243653e-49 | -8.615850e-47 |
| Msa0429170 | Msa0700070 | 0.820559 | 6.435814e-53 | -8.615850e-47 |
| Msa0429170 | Msa0719970 | 0.806119 | 9.602765e-50 | -8.615850e-47 |
| Msa0429170 | Msa0722930 | 0.846985 | 1.539623e-59 | -8.615850e-47 |
| Msa0429170 | Msa0723140 | 0.851213 | 1.027549e-60 | -8.615850e-47 |
| Msa0429170 | Msa0807050 | 0.841492 | 4.597798e-58 | -8.615850e-47 |
| Msa0429170 | Msa0832990 | 0.843155 | 1.667438e-58 | -8.615850e-47 |
| Msa0429170 | Msa0843280 | 0.844327 | 8.096924e-59 | -8.615850e-47 |
| Msa0429170 | Msa0861560 | 0.816521 | 5.298205e-52 | -8.615850e-47 |
| Msa0429170 | Msa0880960 | 0.804282 | 2.328419e-49 | -8.615850e-47 |
| Msa0429170 | Msa0883390 | 0.808406 | 3.145593e-50 | -8.615850e-47 |
| Msa0429170 | Msa0883660 | 0.808121 | 3.617671e-50 | -8.615850e-47 |
| Msa0429170 | Msa0883670 | 0.802508 | 5.427411e-49 | -8.615850e-47 |
| Msa0429170 | Msa0894500 | 0.800372 | 1.486356e-48 | -8.615850e-47 |
| Msa0429170 | Msa0900200 | 0.814567 | 1.442600e-51 | -8.615850e-47 |
| Msa0429170 | Msa0951720 | 0.809924 | 1.487947e-50 | -8.615850e-47 |
| Msa0429170 | Msa0965520 | 0.813545 | 2.424655e-51 | -8.615850e-47 |
| Msa0429170 | Msa1000020 | 0.803696 | 3.081888e-49 | -8.615850e-47 |
| Msa0429170 | Msa1071310 | 0.800001 | 1.768836e-48 | -8.615850e-47 |
| Msa0429170 | Msa1075080 | -0.803008 | 4.278168e-49 | -8.615850e-47 |
| Msa0429170 | Msa1080790 | 0.856990 | 2.213603e-62 | -8.615850e-47 |
| Msa0429170 | Msa1081710 | 0.810265 | 1.255910e-50 | -8.615850e-47 |
| Msa0429170 | Msa1118930 | 0.854079 | 1.562430e-61 | -8.615850e-47 |
| Msa0429170 | Msa1132950 | 0.842147 | 3.087653e-58 | -8.615850e-47 |
| Msa0429170 | Msa1141250 | -0.815485 | 9.026813e-52 | -8.615850e-47 |
| Msa0429170 | Msa1204190 | -0.814562 | 1.446431e-51 | -8.615850e-47 |
| Msa0429170 | Msa1208340 | 0.800034 | 1.741220e-48 | -8.615850e-47 |
| Msa0429170 | Msa1237260 | 0.805189 | 1.504917e-49 | -8.615850e-47 |
| Msa0429170 | Msa1370630 | 0.844559 | 7.013670e-59 | -8.615850e-47 |
| Msa0429170 | Msa1371580 | 0.802242 | 6.155928e-49 | -8.615850e-47 |
| Msa0429170 | Msa1409720 | 0.811783 | 5.890510e-51 | -8.615850e-47 |
| Msa0429170 | Msa1445250 | 0.826286 | 2.948401e-54 | -8.615850e-47 |
| Msa0429170 | Msa1454860 | 0.803206 | 3.893653e-49 | -8.615850e-47 |
| Msa0429170 | Msa1457450 | 0.802914 | 4.474864e-49 | -8.615850e-47 |
| Msa0243470 | Msa0429170 | 0.814073 | 1.854511e-51 | -8.615850e-47 |
| Msa0260270 | Msa0429170 | -0.828410 | 9.131263e-55 | -8.615850e-47 |
| Msa0304270 | Msa0429170 | -0.813933 | 1.991723e-51 | -8.615850e-47 |
| Msa0304310 | Msa0429170 | -0.825986 | 3.475312e-54 | -8.615850e-47 |
| Msa0334170 | Msa0429170 | 0.817279 | 3.580810e-52 | -8.615850e-47 |
| Msa0362430 | Msa0429170 | 0.824714 | 6.950371e-54 | -8.615850e-47 |
| Msa0363460 | Msa0429170 | 0.856865 | 2.409078e-62 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0429170 | MtrunA17_Chr3g0132961 | 96.523 | 604 | 20 | 1 | 1 | 604 | 1 | 603 | 0.0 | 1206 |
| Msa0429170 | MtrunA17_Chr3g0132931 | 62.586 | 580 | 200 | 8 | 11 | 582 | 10 | 580 | 0.0 | 702 |
| Msa0429170 | MtrunA17_Chr5g0412241 | 58.487 | 489 | 189 | 7 | 87 | 566 | 72 | 555 | 0.0 | 577 |
| Msa0429170 | MtrunA17_Chr3g0132941 | 36.410 | 195 | 75 | 9 | 331 | 514 | 143 | 299 | 1.83e-15 | 77.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0429170 | AT1G58200.2 | 55.470 | 521 | 212 | 5 | 77 | 583 | 66 | 580 | 0.0 | 578 |
| Msa0429170 | AT1G58200.1 | 55.470 | 521 | 212 | 5 | 77 | 583 | 66 | 580 | 0.0 | 578 |
| Msa0429170 | AT5G10490.1 | 50.336 | 596 | 265 | 8 | 13 | 597 | 1 | 576 | 0.0 | 564 |
| Msa0429170 | AT5G10490.3 | 51.670 | 569 | 254 | 6 | 37 | 597 | 19 | 574 | 0.0 | 562 |
| Msa0429170 | AT5G10490.2 | 54.231 | 520 | 228 | 4 | 78 | 597 | 39 | 548 | 0.0 | 560 |
| Msa0429170 | AT4G00290.1 | 26.106 | 226 | 155 | 6 | 240 | 464 | 276 | 490 | 5.60e-13 | 72.0 |
Find 150 sgRNAs with CRISPR-Local
Find 348 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATACAAATAATTTGATTTA+TGG | 0.107623 | 3_2:-80378883 | None:intergenic |
| CATTAGATGATAACAAAATT+TGG | 0.123396 | 3_2:-80378573 | None:intergenic |
| CACAATTTATGTGCATAATA+TGG | 0.134816 | 3_2:-80378851 | None:intergenic |
| TAAAATTCAGTTGCAAAATT+TGG | 0.150816 | 3_2:+80372901 | Msa0429170:five_prime_UTR |
| TGCTGCCGTGTCATTGTTTA+TGG | 0.178720 | 3_2:+80375861 | Msa0429170:CDS |
| ATCCCCGCTCTTGGTATAAT+TGG | 0.180696 | 3_2:+80374627 | Msa0429170:CDS |
| TGCTCTCGAACGAGTGAAAA+TGG | 0.182392 | 3_2:-80378272 | None:intergenic |
| ATAATTGGCTTTGCTATCTT+TGG | 0.188913 | 3_2:+80374642 | Msa0429170:CDS |
| ATTAAAGGATATGAGGTTTC+TGG | 0.198213 | 3_2:+80376211 | Msa0429170:CDS |
| CATAATCGATTACCGGAATT+AGG | 0.223045 | 3_2:-80373422 | None:intergenic |
| GCAACCTTTGCATATATAAA+TGG | 0.224580 | 3_2:+80378777 | Msa0429170:three_prime_UTR |
| CAACCTTTGCTGCTGTGGAC+TGG | 0.249892 | 3_2:+80374856 | Msa0429170:CDS |
| AACCTCTCCTACGCCGTTGC+AGG | 0.261064 | 3_2:+80374670 | Msa0429170:CDS |
| ATTAGATGATAACAAAATTT+GGG | 0.273692 | 3_2:-80378572 | None:intergenic |
| GGGTGATGTTTCTGATTTAG+AGG | 0.275710 | 3_2:-80378551 | None:intergenic |
| AGATTCAGAGGCTAAATTTC+GGG | 0.275982 | 3_2:-80378506 | None:intergenic |
| GGGATTAATTGAAGCATAAT+TGG | 0.279859 | 3_2:-80374609 | None:intergenic |
| GTTGAAGGCTTAGCTTTATA+AGG | 0.287270 | 3_2:-80378328 | None:intergenic |
| AGCTGATATGCGCAAGGTTT+TGG | 0.287823 | 3_2:+80376647 | Msa0429170:CDS |
| CATAATATGGGTAATCAGTT+AGG | 0.296725 | 3_2:-80378838 | None:intergenic |
| ACAGTATTGCTTTCACTTGC+AGG | 0.308252 | 3_2:+80375934 | Msa0429170:CDS |
| AGGCAATACATTAGTAATAC+TGG | 0.324900 | 3_2:+80373289 | Msa0429170:CDS |
| AACCTTTGCTGCTGTGGACT+GGG | 0.325778 | 3_2:+80374857 | Msa0429170:CDS |
| ATTCGTGAAACCTTGATAAC+TGG | 0.330316 | 3_2:+80378388 | Msa0429170:CDS |
| TATCAAGGTTTCACGAATCT+TGG | 0.330485 | 3_2:-80378383 | None:intergenic |
| CGGATTAAAACAAAGATTAA+AGG | 0.332484 | 3_2:+80376196 | Msa0429170:CDS |
| TCCAGAAAATCAAGCTCTTA+TGG | 0.340918 | 3_2:+80376731 | Msa0429170:CDS |
| AATTCTACAATGACATATTC+AGG | 0.347346 | 3_2:+80373241 | Msa0429170:CDS |
| ATAGTAGTTGATTGAGTTGA+AGG | 0.349386 | 3_2:-80378343 | None:intergenic |
| TTCGATTGTTTCATGACTTT+AGG | 0.350736 | 3_2:+80373269 | Msa0429170:CDS |
| GATTTAGAGGCCTTCTGAAC+TGG | 0.357096 | 3_2:-80378538 | None:intergenic |
| AAGCTGTATATACTGCAGTA+TGG | 0.361800 | 3_2:+80375836 | Msa0429170:CDS |
| GTGGTTGGCTGCTGGTGGTA+TGG | 0.365271 | 3_2:+80375909 | Msa0429170:CDS |
| ACTAGAGTTAGAACTCAAAT+TGG | 0.367139 | 3_2:+80378811 | Msa0429170:three_prime_UTR |
| TCTCTCTCCAACAGTATCTA+AGG | 0.371637 | 3_2:+80373029 | Msa0429170:five_prime_UTR |
| GTCATTGTTTATGGAGTTGT+TGG | 0.376702 | 3_2:+80375870 | Msa0429170:CDS |
| CTTATGTCAAGCTGGGTCTA+TGG | 0.377770 | 3_2:+80378730 | Msa0429170:three_prime_UTR |
| AAGATTCAGAGGCTAAATTT+CGG | 0.378425 | 3_2:-80378507 | None:intergenic |
| AGCAGCCGTTGCTTTAAAAT+CGG | 0.381438 | 3_2:-80375016 | None:intergenic |
| ATGTTGACTTTAACTTATCC+TGG | 0.383411 | 3_2:-80378471 | None:intergenic |
| AACAAAGATTAAAGGATATG+AGG | 0.385214 | 3_2:+80376204 | Msa0429170:CDS |
| GTGAAAATGGGGTCGTCAAA+TGG | 0.395728 | 3_2:-80378259 | None:intergenic |
| ACAATTTATGTGCATAATAT+GGG | 0.395988 | 3_2:-80378850 | None:intergenic |
| TTCACACTCAACTTGTGATT+AGG | 0.403461 | 3_2:-80376427 | None:intergenic |
| CAATCATCCACGGCATGGTT+TGG | 0.405653 | 3_2:+80373457 | Msa0429170:CDS |
| TGGTTGGCTGCTGGTGGTAT+GGG | 0.409781 | 3_2:+80375910 | Msa0429170:CDS |
| CTGGGGTAATGCTGCTCTGC+AGG | 0.412173 | 3_2:+80374875 | Msa0429170:CDS |
| AGGTCATGTAATGCTATATC+AGG | 0.416426 | 3_2:+80374582 | Msa0429170:intron |
| ATCTTTGAAACCAGTTATCA+AGG | 0.419330 | 3_2:-80378398 | None:intergenic |
| GTTTAATGCGTGTAATAAAC+AGG | 0.422934 | 3_2:-80378922 | None:intergenic |
| GCTCTCGAACGAGTGAAAAT+GGG | 0.423150 | 3_2:-80378271 | None:intergenic |
| AACAAAACATTACATCTAGA+AGG | 0.427497 | 3_2:-80373661 | None:intergenic |
| CATTTGCCTACTGTTCTTCA+AGG | 0.430153 | 3_2:+80375071 | Msa0429170:CDS |
| CAGATGAGCATTGATCTTAT+CGG | 0.431050 | 3_2:+80375811 | Msa0429170:intron |
| ATCCGCTCATTCACAACAAA+TGG | 0.433039 | 3_2:-80376178 | None:intergenic |
| CGGTCTGCCTTGGTACCGGC+TGG | 0.433778 | 3_2:+80373688 | Msa0429170:CDS |
| ACAAGCACAAAATTTCTGTA+TGG | 0.446067 | 3_2:+80375511 | Msa0429170:CDS |
| ATAACTGGTTTCAAAGATGA+AGG | 0.457024 | 3_2:+80378403 | Msa0429170:CDS |
| TTCAGTGGAACGATAAAAGT+TGG | 0.457315 | 3_2:+80374794 | Msa0429170:intron |
| TTATAAGGTGAATTTGTGAA+TGG | 0.457800 | 3_2:-80378313 | None:intergenic |
| GACAAAACATAATCGATTAC+CGG | 0.463499 | 3_2:-80373429 | None:intergenic |
| TATAAGGTGAATTTGTGAAT+GGG | 0.464354 | 3_2:-80378312 | None:intergenic |
| TGTTGACAGAAACCTAATTC+CGG | 0.464569 | 3_2:+80373410 | Msa0429170:intron |
| AGATGAGCATTGATCTTATC+GGG | 0.466557 | 3_2:+80375812 | Msa0429170:intron |
| TTCACTCGTTCGAGAGCAAA+GGG | 0.468144 | 3_2:+80378277 | Msa0429170:CDS |
| CTTATCCTGGGACTTTACAC+TGG | 0.468864 | 3_2:-80378458 | None:intergenic |
| ACCATGCCGTGGATGATTGA+AGG | 0.469094 | 3_2:-80373453 | None:intergenic |
| TGAAGAGTATCTCCGTGTTA+AGG | 0.473513 | 3_2:+80377492 | Msa0429170:CDS |
| CTTGCGCATATCAGCTATGA+TGG | 0.477938 | 3_2:-80376640 | None:intergenic |
| GCACAGAAGTGGTTGGCTGC+TGG | 0.483881 | 3_2:+80375901 | Msa0429170:CDS |
| TGGTCACCAACAGTAGTTAG+AGG | 0.488933 | 3_2:+80376379 | Msa0429170:CDS |
| AAAACAGGAGGCCATTCTCT+TGG | 0.492432 | 3_2:+80378141 | Msa0429170:intron |
| GGTCTATGGAATGGTTCGGT+TGG | 0.498185 | 3_2:+80378744 | Msa0429170:three_prime_UTR |
| CTTAGAGTCATCAGTCATCA+TGG | 0.504609 | 3_2:+80378169 | Msa0429170:CDS |
| CCCTAGCTGATTAGCCATTG+AGG | 0.504678 | 3_2:+80378688 | Msa0429170:three_prime_UTR |
| CCCTCAATGGCTAATCAGCT+AGG | 0.508055 | 3_2:-80378689 | None:intergenic |
| CCTAGCTGATTAGCCATTGA+GGG | 0.510490 | 3_2:+80378689 | Msa0429170:three_prime_UTR |
| CTGAATTGTGCGGATGGGTG+TGG | 0.513236 | 3_2:-80378203 | None:intergenic |
| GCTGGGTCTATGGAATGGTT+CGG | 0.514432 | 3_2:+80378740 | Msa0429170:three_prime_UTR |
| GTGTCGGTCTGCCTTGGTAC+CGG | 0.515358 | 3_2:+80373684 | Msa0429170:CDS |
| TTTGTTGTGTCGGTCTGCCT+TGG | 0.519884 | 3_2:+80373678 | Msa0429170:CDS |
| CTTCAATTAATCCCCGCTCT+TGG | 0.524426 | 3_2:+80374618 | Msa0429170:CDS |
| ATAATATGGGTAATCAGTTA+GGG | 0.524874 | 3_2:-80378837 | None:intergenic |
| TTATCAAGCTTATGTCAAGC+TGG | 0.526521 | 3_2:+80378722 | Msa0429170:three_prime_UTR |
| TCATTGTTTATGGAGTTGTT+GGG | 0.529134 | 3_2:+80375871 | Msa0429170:CDS |
| AAGCCAATTATACCAAGAGC+GGG | 0.529821 | 3_2:-80374630 | None:intergenic |
| TGTTGACTTTAACTTATCCT+GGG | 0.529999 | 3_2:-80378470 | None:intergenic |
| CTGGGACTTTACACTGGATG+AGG | 0.533658 | 3_2:-80378452 | None:intergenic |
| TTTCACTCGTTCGAGAGCAA+AGG | 0.537364 | 3_2:+80378276 | Msa0429170:CDS |
| AAACATGCCTTAGATACTGT+TGG | 0.537438 | 3_2:-80373036 | None:intergenic |
| CATATTATGCACATAAATTG+TGG | 0.537790 | 3_2:+80378852 | Msa0429170:three_prime_UTR |
| CTCATCCAGTGTAAAGTCCC+AGG | 0.537833 | 3_2:+80378453 | Msa0429170:CDS |
| AATCTACCTTGAAGAACAGT+AGG | 0.538559 | 3_2:-80375077 | None:intergenic |
| CATGAATCATCACACTTGAA+AGG | 0.538831 | 3_2:-80376147 | None:intergenic |
| AGCTGTATATACTGCAGTAT+GGG | 0.539129 | 3_2:+80375837 | Msa0429170:CDS |
| TAATACTAGACTGCCCTCAA+TGG | 0.540488 | 3_2:-80378702 | None:intergenic |
| CCGTTGCTTTAAAATCGGAC+TGG | 0.548639 | 3_2:-80375011 | None:intergenic |
| ACCTCTCCTACGCCGTTGCA+GGG | 0.550012 | 3_2:+80374671 | Msa0429170:CDS |
| TCAACCATTTATATATGCAA+AGG | 0.550765 | 3_2:-80378781 | None:intergenic |
| TGAGGTTTCTGGTAGAGTTG+AGG | 0.552626 | 3_2:+80376222 | Msa0429170:CDS |
| ATCTTAGTAAGAAAACTCAT+TGG | 0.552673 | 3_2:+80376461 | Msa0429170:CDS |
| TTCTGATAATCCAGTTCAGA+AGG | 0.553518 | 3_2:+80378528 | Msa0429170:CDS |
| GCCTTCAATCATCCACGGCA+TGG | 0.556075 | 3_2:+80373452 | Msa0429170:CDS |
| TAGAAGGTACAGGCTTATGT+TGG | 0.558063 | 3_2:-80373645 | None:intergenic |
| TGGCTACTGTTTCGTTGTCA+AGG | 0.558304 | 3_2:+80373737 | Msa0429170:CDS |
| TTGTCGCCTTCAATCATCCA+CGG | 0.558946 | 3_2:+80373447 | Msa0429170:CDS |
| CATCTTCTGAATTGTGCGGA+TGG | 0.559810 | 3_2:-80378209 | None:intergenic |
| GTCAAGCTGGGTCTATGGAA+TGG | 0.560919 | 3_2:+80378735 | Msa0429170:three_prime_UTR |
| GGCCATTTGTTGTGAATGAG+CGG | 0.561264 | 3_2:+80376176 | Msa0429170:CDS |
| TCAGCACCTCTAACTACTGT+TGG | 0.561707 | 3_2:-80376385 | None:intergenic |
| ACCTTTGCTGCTGTGGACTG+GGG | 0.562252 | 3_2:+80374858 | Msa0429170:CDS |
| GGATGAGGGCGTCCATGTTG+CGG | 0.563662 | 3_2:-80378437 | None:intergenic |
| TCTAAGAAGATCCAAGAGAA+TGG | 0.567023 | 3_2:-80378152 | None:intergenic |
| TGGGTCTCTCCGCACAGAAG+TGG | 0.571017 | 3_2:+80375890 | Msa0429170:CDS |
| GGTACCGGCTGGAGCGTGTG+AGG | 0.573244 | 3_2:+80373699 | Msa0429170:CDS |
| TATCAAGCTTATGTCAAGCT+GGG | 0.575502 | 3_2:+80378723 | Msa0429170:three_prime_UTR |
| TCTCTCCGCACAGAAGTGGT+TGG | 0.580196 | 3_2:+80375894 | Msa0429170:CDS |
| TGAGGCTCCGCTGTTGAAAG+TGG | 0.580679 | 3_2:+80373717 | Msa0429170:CDS |
| ATCTTCTGAATTGTGCGGAT+GGG | 0.581018 | 3_2:-80378208 | None:intergenic |
| ATAGAGCCCTGCAACGGCGT+AGG | 0.581176 | 3_2:-80374677 | None:intergenic |
| CTCTCGAACGAGTGAAAATG+GGG | 0.581916 | 3_2:-80378270 | None:intergenic |
| GCCCTGCAACGGCGTAGGAG+AGG | 0.582945 | 3_2:-80374672 | None:intergenic |
| TCACCTTGCTATCAGTCACT+TGG | 0.584498 | 3_2:+80376495 | Msa0429170:CDS |
| ACATTACATCTAGAAGGTAC+AGG | 0.584956 | 3_2:-80373655 | None:intergenic |
| ACCCCAGTCCACAGCAGCAA+AGG | 0.591276 | 3_2:-80374859 | None:intergenic |
| AATTTGTGAATGGGAAAGAG+TGG | 0.592121 | 3_2:-80378303 | None:intergenic |
| CATCCAAGTGACTGATAGCA+AGG | 0.593216 | 3_2:-80376498 | None:intergenic |
| CCTCAATGGCTAATCAGCTA+GGG | 0.595650 | 3_2:-80378688 | None:intergenic |
| GGAGCCTCACACGCTCCAGC+CGG | 0.596349 | 3_2:-80373703 | None:intergenic |
| TCATCAGTCATCATGGAGCT+CGG | 0.597209 | 3_2:+80378176 | Msa0429170:CDS |
| GCTTTCACTTGCAGGTCGTG+AGG | 0.598539 | 3_2:+80375942 | Msa0429170:CDS |
| TTCTGTAGCATGTAGGATGG+TGG | 0.601690 | 3_2:+80376359 | Msa0429170:intron |
| GTGTGATGATTCATGCAACT+CGG | 0.610555 | 3_2:+80376155 | Msa0429170:CDS |
| TTAGATGATAACAAAATTTG+GGG | 0.623288 | 3_2:-80378571 | None:intergenic |
| TGGATTATCAGAAGATTCAG+AGG | 0.623721 | 3_2:-80378518 | None:intergenic |
| ACACGCTCCAGCCGGTACCA+AGG | 0.634927 | 3_2:-80373695 | None:intergenic |
| CATCATAGCTGATATGCGCA+AGG | 0.643564 | 3_2:+80376641 | Msa0429170:CDS |
| CAGAAGTGGTTGGCTGCTGG+TGG | 0.645748 | 3_2:+80375904 | Msa0429170:CDS |
| CAACTCCATAAACAATGACA+CGG | 0.645901 | 3_2:-80375866 | None:intergenic |
| AAAGCCAATTATACCAAGAG+CGG | 0.646228 | 3_2:-80374631 | None:intergenic |
| ACAGTAGGCAAATGTAAGCA+CGG | 0.647849 | 3_2:-80375062 | None:intergenic |
| GGAGAAATAGAGCCCTGCAA+CGG | 0.655517 | 3_2:-80374683 | None:intergenic |
| AGACATACCAAACCATGCCG+TGG | 0.659701 | 3_2:-80373464 | None:intergenic |
| TGGGACTTTACACTGGATGA+GGG | 0.659785 | 3_2:-80378451 | None:intergenic |
| AATCTAGTCTCACCTTAACA+CGG | 0.682332 | 3_2:-80377504 | None:intergenic |
| AGCAGCCAACCACTTCTGTG+CGG | 0.694661 | 3_2:-80375899 | None:intergenic |
| TGTACATCTTCTGAATTGTG+CGG | 0.699375 | 3_2:-80378213 | None:intergenic |
| AGCCAATTATACCAAGAGCG+GGG | 0.701628 | 3_2:-80374629 | None:intergenic |
| ACAGTAGCCACTTTCAACAG+CGG | 0.712676 | 3_2:-80373724 | None:intergenic |
| AGTTGAGTGTGAATGTTGTG+AGG | 0.723498 | 3_2:+80376437 | Msa0429170:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAGAATAATTTTCAAAAAAT+AGG | - | chr3_2:80374100-80374119 | None:intergenic | 10.0% |
| !! | ACACAAAAATAAATAAAAAA+GGG | + | chr3_2:80375221-80375240 | Msa0429170:intron | 10.0% |
| !!! | TACTATCATTATTTTTTATT+TGG | + | chr3_2:80375315-80375334 | Msa0429170:intron | 10.0% |
| !!! | TAACATTTTTCTAAAATAAT+GGG | + | chr3_2:80375612-80375631 | Msa0429170:intron | 10.0% |
| !!! | TATTTTTATATCACTTAAAA+TGG | - | chr3_2:80376313-80376332 | None:intergenic | 10.0% |
| !!! | TTTTTTGTAAACATAAAAAT+TGG | - | chr3_2:80377679-80377698 | None:intergenic | 10.0% |
| !!! | TATACAAATAATTTGATTTA+TGG | - | chr3_2:80378886-80378905 | None:intergenic | 10.0% |
| !! | GCAAAAAAAAAAAAAAAAAC+TGG | - | chr3_2:80373073-80373092 | None:intergenic | 15.0% |
| !! | ATATATATAGTTGTCAAAAA+TGG | - | chr3_2:80373120-80373139 | None:intergenic | 15.0% |
| !! | TGAATAAAATTAAAACAGAA+GGG | - | chr3_2:80373154-80373173 | None:intergenic | 15.0% |
| !! | ATGAATAAAATTAAAACAGA+AGG | - | chr3_2:80373155-80373174 | None:intergenic | 15.0% |
| !!! | ATTTACTTCTGAATATTTTA+TGG | + | chr3_2:80373557-80373576 | Msa0429170:intron | 15.0% |
| !! | TTGTTAGAATTAATGTAAAT+TGG | + | chr3_2:80373819-80373838 | Msa0429170:intron | 15.0% |
| !!! | CATAATTTAATTTAGAGTTT+CGG | - | chr3_2:80374406-80374425 | None:intergenic | 15.0% |
| !!! | TTATATTTTGAAATTGATGT+AGG | + | chr3_2:80374562-80374581 | Msa0429170:intron | 15.0% |
| !! | CACACAAAAATAAATAAAAA+AGG | + | chr3_2:80375220-80375239 | Msa0429170:intron | 15.0% |
| !!! | GTAACATTTTTCTAAAATAA+TGG | + | chr3_2:80375611-80375630 | Msa0429170:intron | 15.0% |
| !!! | AATAATCCTATATATTTTAC+AGG | - | chr3_2:80375713-80375732 | None:intergenic | 15.0% |
| !!! | TTTTGTCATTTACTTTTTTA+TGG | + | chr3_2:80376017-80376036 | Msa0429170:intron | 15.0% |
| !! | ATGGTATTTAAAAAATTTAC+TGG | + | chr3_2:80376553-80376572 | Msa0429170:intron | 15.0% |
| !! | TGGTATTTAAAAAATTTACT+GGG | + | chr3_2:80376554-80376573 | Msa0429170:intron | 15.0% |
| !!! | CATTTATTTCATTAACATTT+TGG | + | chr3_2:80377307-80377326 | Msa0429170:intron | 15.0% |
| !! | AAAAAGTAAAAAGTAAATCT+TGG | - | chr3_2:80377733-80377752 | None:intergenic | 15.0% |
| !! | AATTGTTTCATCATAAAATA+TGG | + | chr3_2:80378028-80378047 | Msa0429170:intron | 15.0% |
| !! | ATTAGATGATAACAAAATTT+GGG | - | chr3_2:80378575-80378594 | None:intergenic | 15.0% |
| !! | TAAAATTCAGTTGCAAAATT+TGG | + | chr3_2:80372901-80372920 | Msa0429170:five_prime_UTR | 20.0% |
| !! | TAATGTAAATTGGACAATTA+TGG | + | chr3_2:80373829-80373848 | Msa0429170:intron | 20.0% |
| !! | GTGTAATTATTATGGTAATT+AGG | + | chr3_2:80373861-80373880 | Msa0429170:intron | 20.0% |
| !! | AAAATTAGATACTAACTTCT+TGG | - | chr3_2:80374707-80374726 | None:intergenic | 20.0% |
| !! | AATAAGCTTATCTTACAATT+AGG | - | chr3_2:80375169-80375188 | None:intergenic | 20.0% |
| !! | CAAAAATAAATAAAAAAGGG+AGG | + | chr3_2:80375224-80375243 | Msa0429170:intron | 20.0% |
| !! | AATTATCTAACTTACTGAAA+AGG | + | chr3_2:80376253-80376272 | Msa0429170:intron | 20.0% |
| !!! | GTGATATAAAAATAGTTTTC+TGG | + | chr3_2:80376319-80376338 | Msa0429170:intron | 20.0% |
| !!! | AATTTTTTTTGTTCTACTAG+AGG | - | chr3_2:80376681-80376700 | None:intergenic | 20.0% |
| !! | ATAAACCAATTAACAGAAAA+AGG | - | chr3_2:80376763-80376782 | None:intergenic | 20.0% |
| !! | TTGTCAAATTATACTATGAT+AGG | + | chr3_2:80377200-80377219 | Msa0429170:intron | 20.0% |
| !! | TAAAAATTGGTGAAAAATTG+AGG | - | chr3_2:80377666-80377685 | None:intergenic | 20.0% |
| !! | CACATAATAGCTTATTATAT+AGG | + | chr3_2:80377816-80377835 | Msa0429170:intron | 20.0% |
| !! | AACAAATGCATAACAAATTT+AGG | - | chr3_2:80377926-80377945 | None:intergenic | 20.0% |
| !!! | TATATTCAAGTCATTTTGTT+CGG | + | chr3_2:80378067-80378086 | Msa0429170:intron | 20.0% |
| !! | TTAGATGATAACAAAATTTG+GGG | - | chr3_2:80378574-80378593 | None:intergenic | 20.0% |
| !! | CATTAGATGATAACAAAATT+TGG | - | chr3_2:80378576-80378595 | None:intergenic | 20.0% |
| !! | ACAATTTATGTGCATAATAT+GGG | - | chr3_2:80378853-80378872 | None:intergenic | 20.0% |
| ! | AATTCTACAATGACATATTC+AGG | + | chr3_2:80373241-80373260 | Msa0429170:CDS | 25.0% |
| ! | AACAAAACATTACATCTAGA+AGG | - | chr3_2:80373664-80373683 | None:intergenic | 25.0% |
| !!! | ATTTTATTGCATGATGGAAA+AGG | - | chr3_2:80373975-80373994 | None:intergenic | 25.0% |
| ! | TTTCCATCATGCAATAAAAT+TGG | + | chr3_2:80373975-80373994 | Msa0429170:intron | 25.0% |
| !! | AAACCAATTTTATTGCATGA+TGG | - | chr3_2:80373981-80374000 | None:intergenic | 25.0% |
| !!! | TGCAATAAAATTGGTTTGTT+TGG | + | chr3_2:80373984-80374003 | Msa0429170:intron | 25.0% |
| ! | GAAAATTATTCTACTTGCAA+TGG | + | chr3_2:80374107-80374126 | Msa0429170:intron | 25.0% |
| !! | TATTTTCTTGAGATTTGTGT+CGG | + | chr3_2:80374284-80374303 | Msa0429170:intron | 25.0% |
| ! | GCATCAAATGATATGATTTA+TGG | - | chr3_2:80374465-80374484 | None:intergenic | 25.0% |
| ! | CCTTCATAGATATTGTATTT+AGG | - | chr3_2:80374539-80374558 | None:intergenic | 25.0% |
| ! | CCTAAATACAATATCTATGA+AGG | + | chr3_2:80374536-80374555 | Msa0429170:intron | 25.0% |
| !!! | TTGATAACATATGTTTTCAG+TGG | + | chr3_2:80374779-80374798 | Msa0429170:intron | 25.0% |
| !! | GGAATAAAAAAGTATAGACA+CGG | + | chr3_2:80375245-80375264 | Msa0429170:intron | 25.0% |
| !!! | AACACATAATAGTAATGGAT+GGG | - | chr3_2:80375430-80375449 | None:intergenic | 25.0% |
| !! | AAACACATAATAGTAATGGA+TGG | - | chr3_2:80375431-80375450 | None:intergenic | 25.0% |
| ! | CTTCAAACACATAATAGTAA+TGG | - | chr3_2:80375435-80375454 | None:intergenic | 25.0% |
| !! | TACTTTTCTTTCATTGTTGT+CGG | - | chr3_2:80375546-80375565 | None:intergenic | 25.0% |
| ! | CTACTATTCTAATCTTCATT+TGG | - | chr3_2:80375686-80375705 | None:intergenic | 25.0% |
| ! | AGTCAACCTGTAAAATATAT+AGG | + | chr3_2:80375704-80375723 | Msa0429170:intron | 25.0% |
| ! | TTTCCACAATGTTAATTATG+AGG | + | chr3_2:80375732-80375751 | Msa0429170:intron | 25.0% |
| ! | TTCCACAATGTTAATTATGA+GGG | + | chr3_2:80375733-80375752 | Msa0429170:intron | 25.0% |
| !!! | AGAAAGTATCAACTATCAAA+GGG | - | chr3_2:80375978-80375997 | None:intergenic | 25.0% |
| !!! | TAGAAAGTATCAACTATCAA+AGG | - | chr3_2:80375979-80375998 | None:intergenic | 25.0% |
| ! | CGGATTAAAACAAAGATTAA+AGG | + | chr3_2:80376196-80376215 | Msa0429170:CDS | 25.0% |
| ! | AACAAAGATTAAAGGATATG+AGG | + | chr3_2:80376204-80376223 | Msa0429170:CDS | 25.0% |
| ! | ATCTTAGTAAGAAAACTCAT+TGG | + | chr3_2:80376461-80376480 | Msa0429170:CDS | 25.0% |
| ! | AACAAAAAAAATTGCACAGA+AGG | + | chr3_2:80376688-80376707 | Msa0429170:CDS | 25.0% |
| ! | ACAAAAAAAATTGCACAGAA+GGG | + | chr3_2:80376689-80376708 | Msa0429170:CDS | 25.0% |
| !! | TGATACCTTTTTCTGTTAAT+TGG | + | chr3_2:80376755-80376774 | Msa0429170:intron | 25.0% |
| ! | CCTAGTAAAAAATTCTACAA+AGG | - | chr3_2:80376987-80377006 | None:intergenic | 25.0% |
| !!! | CCTTTGTAGAATTTTTTACT+AGG | + | chr3_2:80376984-80377003 | Msa0429170:intron | 25.0% |
| !! | GTATAATTTGACAACCATTT+TGG | - | chr3_2:80377194-80377213 | None:intergenic | 25.0% |
| ! | CCAATGATTGATAAATTACT+AGG | - | chr3_2:80377249-80377268 | None:intergenic | 25.0% |
| ! | CCTAGTAATTTATCAATCAT+TGG | + | chr3_2:80377246-80377265 | Msa0429170:intron | 25.0% |
| ! | TAATATCTGCAACAGAAAAA+GGG | - | chr3_2:80377443-80377462 | None:intergenic | 25.0% |
| ! | TTTCTTCTTCAAATTACTCT+AGG | + | chr3_2:80377753-80377772 | Msa0429170:intron | 25.0% |
| ! | CTTATTATATAGGCTGATAT+CGG | + | chr3_2:80377826-80377845 | Msa0429170:intron | 25.0% |
| ! | GAAACAATAGTAATGTAATG+AGG | - | chr3_2:80377887-80377906 | None:intergenic | 25.0% |
| ! | TAATTTCCATGTGATAAAAC+AGG | + | chr3_2:80378126-80378145 | Msa0429170:intron | 25.0% |
| ! | TATAAGGTGAATTTGTGAAT+GGG | - | chr3_2:80378315-80378334 | None:intergenic | 25.0% |
| ! | TTATAAGGTGAATTTGTGAA+TGG | - | chr3_2:80378316-80378335 | None:intergenic | 25.0% |
| !!! | TTTTTTTCATCTTGCTTTGA+TGG | - | chr3_2:80378607-80378626 | None:intergenic | 25.0% |
| ! | TCAACCATTTATATATGCAA+AGG | - | chr3_2:80378784-80378803 | None:intergenic | 25.0% |
| ! | ATAATATGGGTAATCAGTTA+GGG | - | chr3_2:80378840-80378859 | None:intergenic | 25.0% |
| ! | CACAATTTATGTGCATAATA+TGG | - | chr3_2:80378854-80378873 | None:intergenic | 25.0% |
| ! | CATATTATGCACATAAATTG+TGG | + | chr3_2:80378852-80378871 | Msa0429170:three_prime_UTR | 25.0% |
| ! | TTTTCTTTCTCCAATATCCT+CGG | + | chr3_2:80372984-80373003 | Msa0429170:five_prime_UTR | 30.0% |
| TTCGATTGTTTCATGACTTT+AGG | + | chr3_2:80373269-80373288 | Msa0429170:CDS | 30.0% | |
| AGGCAATACATTAGTAATAC+TGG | + | chr3_2:80373289-80373308 | Msa0429170:CDS | 30.0% | |
| GACAAAACATAATCGATTAC+CGG | - | chr3_2:80373432-80373451 | None:intergenic | 30.0% | |
| CTTTGTGAATTGACAGAATA+TGG | + | chr3_2:80373588-80373607 | Msa0429170:intron | 30.0% | |
| !! | GATGTAATGTTTTGTTGTGT+CGG | + | chr3_2:80373668-80373687 | Msa0429170:CDS | 30.0% |
| TAAATTGGACAATTATGGAC+TGG | + | chr3_2:80373834-80373853 | Msa0429170:intron | 30.0% | |
| GGTTATGACTTATGATTGAA+AGG | + | chr3_2:80374128-80374147 | Msa0429170:intron | 30.0% | |
| AGATAGCTAATTGTGTACAA+TGG | - | chr3_2:80374197-80374216 | None:intergenic | 30.0% | |
| ! | ATTTTCTTGAGATTTGTGTC+GGG | + | chr3_2:80374285-80374304 | Msa0429170:intron | 30.0% |
| CTAAAAGGAAAACCAAAGTT+TGG | - | chr3_2:80374329-80374348 | None:intergenic | 30.0% | |
| !!! | CAAACTTTGGTTTTCCTTTT+AGG | + | chr3_2:80374327-80374346 | Msa0429170:intron | 30.0% |
| ! | TTTAATTTAGAGTTTCGGTG+CGG | - | chr3_2:80374401-80374420 | None:intergenic | 30.0% |
| AGGAATTAGTATGCTGAAAA+AGG | - | chr3_2:80374519-80374538 | None:intergenic | 30.0% | |
| GGGATTAATTGAAGCATAAT+TGG | - | chr3_2:80374612-80374631 | None:intergenic | 30.0% | |
| !! | ATAATTGGCTTTGCTATCTT+TGG | + | chr3_2:80374642-80374661 | Msa0429170:CDS | 30.0% |
| ACAAGCACAAAATTTCTGTA+TGG | + | chr3_2:80375511-80375530 | Msa0429170:CDS | 30.0% | |
| ACATGGCAAAGATATGTAAA+AGG | - | chr3_2:80375573-80375592 | None:intergenic | 30.0% | |
| !! | AACTCATCTAAAGCTTTAAG+TGG | - | chr3_2:80375655-80375674 | None:intergenic | 30.0% |
| TCATTGTTTATGGAGTTGTT+GGG | + | chr3_2:80375871-80375890 | Msa0429170:CDS | 30.0% | |
| ATTAAAGGATATGAGGTTTC+TGG | + | chr3_2:80376211-80376230 | Msa0429170:CDS | 30.0% | |
| ! | TCATATTTTCTGTAGCATGT+AGG | + | chr3_2:80376352-80376371 | Msa0429170:intron | 30.0% |
| ! | AATTTACTGGGATTTTCTGA+TGG | + | chr3_2:80376566-80376585 | Msa0429170:intron | 30.0% |
| ! | TTGTTCTACTAGAGGATTTT+TGG | - | chr3_2:80376673-80376692 | None:intergenic | 30.0% |
| AAGGGAAGAAAATAAGATAC+TGG | - | chr3_2:80376811-80376830 | None:intergenic | 30.0% | |
| TTAGAAACCTGATTCAACTA+CGG | - | chr3_2:80377051-80377070 | None:intergenic | 30.0% | |
| ATAACTCTGACTAAAGTCAA+AGG | + | chr3_2:80377070-80377089 | Msa0429170:intron | 30.0% | |
| TCATCTGTTTCATTCCAAAA+TGG | + | chr3_2:80377177-80377196 | Msa0429170:intron | 30.0% | |
| ATCAATCATTGGAATCTGAT+TGG | + | chr3_2:80377257-80377276 | Msa0429170:intron | 30.0% | |
| AGTAGAGCAGAAAGATAATA+GGG | - | chr3_2:80377356-80377375 | None:intergenic | 30.0% | |
| AAGTAGAGCAGAAAGATAAT+AGG | - | chr3_2:80377357-80377376 | None:intergenic | 30.0% | |
| CTAATATCTGCAACAGAAAA+AGG | - | chr3_2:80377444-80377463 | None:intergenic | 30.0% | |
| TTTAGGCTACACAATATTTC+TGG | - | chr3_2:80377909-80377928 | None:intergenic | 30.0% | |
| ! | TTTTGTTCGGTTAACTGTTA+AGG | + | chr3_2:80378080-80378099 | Msa0429170:intron | 30.0% |
| TTTGTTCGGTTAACTGTTAA+GGG | + | chr3_2:80378081-80378100 | Msa0429170:intron | 30.0% | |
| !! | ATAGTAGTTGATTGAGTTGA+AGG | - | chr3_2:80378346-80378365 | None:intergenic | 30.0% |
| !! | ATCTTTGAAACCAGTTATCA+AGG | - | chr3_2:80378401-80378420 | None:intergenic | 30.0% |
| ! | ATAACTGGTTTCAAAGATGA+AGG | + | chr3_2:80378403-80378422 | Msa0429170:CDS | 30.0% |
| !! | TGTTGACTTTAACTTATCCT+GGG | - | chr3_2:80378473-80378492 | None:intergenic | 30.0% |
| !! | ATGTTGACTTTAACTTATCC+TGG | - | chr3_2:80378474-80378493 | None:intergenic | 30.0% |
| AAGATTCAGAGGCTAAATTT+CGG | - | chr3_2:80378510-80378529 | None:intergenic | 30.0% | |
| GCAACCTTTGCATATATAAA+TGG | + | chr3_2:80378777-80378796 | Msa0429170:three_prime_UTR | 30.0% | |
| ACTAGAGTTAGAACTCAAAT+TGG | + | chr3_2:80378811-80378830 | Msa0429170:three_prime_UTR | 30.0% | |
| CATAATATGGGTAATCAGTT+AGG | - | chr3_2:80378841-80378860 | None:intergenic | 30.0% | |
| GTTTAATGCGTGTAATAAAC+AGG | - | chr3_2:80378925-80378944 | None:intergenic | 30.0% | |
| ! | GTTTTGCGCTGTTTGTAAAT+TGG | + | chr3_2:80372923-80372942 | Msa0429170:five_prime_UTR | 35.0% |
| ! | GATTCTTTTTCCGAGGATAT+TGG | - | chr3_2:80372997-80373016 | None:intergenic | 35.0% |
| ! | GATGTTTGATTCTTTTTCCG+AGG | - | chr3_2:80373004-80373023 | None:intergenic | 35.0% |
| AAACATGCCTTAGATACTGT+TGG | - | chr3_2:80373039-80373058 | None:intergenic | 35.0% | |
| ! | ATCTAAGGCATGTTTAAGCA+AGG | + | chr3_2:80373044-80373063 | Msa0429170:intron | 35.0% |
| TTTGTCATGTATGTTGTGTC+TGG | + | chr3_2:80373323-80373342 | Msa0429170:intron | 35.0% | |
| TGTTGACAGAAACCTAATTC+CGG | + | chr3_2:80373410-80373429 | Msa0429170:intron | 35.0% | |
| CATAATCGATTACCGGAATT+AGG | - | chr3_2:80373425-80373444 | None:intergenic | 35.0% | |
| TTCTTGTGCAGTGATTGTAT+TGG | + | chr3_2:80373508-80373527 | Msa0429170:intron | 35.0% | |
| ! | ACATTACATCTAGAAGGTAC+AGG | - | chr3_2:80373658-80373677 | None:intergenic | 35.0% |
| AAACTTCTGTCAACTACGAA+AGG | - | chr3_2:80373778-80373797 | None:intergenic | 35.0% | |
| ACAGAAGTTTCGTCATTCAT+TGG | + | chr3_2:80373788-80373807 | Msa0429170:intron | 35.0% | |
| CTGGACTCGTGTAATTATTA+TGG | + | chr3_2:80373853-80373872 | Msa0429170:intron | 35.0% | |
| !!! | GCACTGTTGTTTTTACATGT+AGG | - | chr3_2:80374072-80374091 | None:intergenic | 35.0% |
| GCTAATTGTGTACAATGGTT+GGG | - | chr3_2:80374192-80374211 | None:intergenic | 35.0% | |
| AGCTAATTGTGTACAATGGT+TGG | - | chr3_2:80374193-80374212 | None:intergenic | 35.0% | |
| TTACCATACGAAAGGATGAT+GGG | - | chr3_2:80374256-80374275 | None:intergenic | 35.0% | |
| AGGTCATGTAATGCTATATC+AGG | + | chr3_2:80374582-80374601 | Msa0429170:intron | 35.0% | |
| AAAGCCAATTATACCAAGAG+CGG | - | chr3_2:80374634-80374653 | None:intergenic | 35.0% | |
| ! | CAATTGCTTTAGACAACACA+TGG | - | chr3_2:80374733-80374752 | None:intergenic | 35.0% |
| TTCAGTGGAACGATAAAAGT+TGG | + | chr3_2:80374794-80374813 | Msa0429170:intron | 35.0% | |
| AGGACTTGACAAACTTTCAA+CGG | - | chr3_2:80374927-80374946 | None:intergenic | 35.0% | |
| AATCTACCTTGAAGAACAGT+AGG | - | chr3_2:80375080-80375099 | None:intergenic | 35.0% | |
| ATTATGTCCACAGTTGTTGT+CGG | + | chr3_2:80375114-80375133 | Msa0429170:intron | 35.0% | |
| GGCGCAAGATATTAATAGTA+TGG | - | chr3_2:80375148-80375167 | None:intergenic | 35.0% | |
| ATGTTACACACACACATGAA+TGG | - | chr3_2:80375598-80375617 | None:intergenic | 35.0% | |
| CACCCTCATAATTAACATTG+TGG | - | chr3_2:80375738-80375757 | None:intergenic | 35.0% | |
| !! | CAGATGAGCATTGATCTTAT+CGG | + | chr3_2:80375811-80375830 | Msa0429170:intron | 35.0% |
| !! | AGATGAGCATTGATCTTATC+GGG | + | chr3_2:80375812-80375831 | Msa0429170:intron | 35.0% |
| AAGCTGTATATACTGCAGTA+TGG | + | chr3_2:80375836-80375855 | Msa0429170:CDS | 35.0% | |
| AGCTGTATATACTGCAGTAT+GGG | + | chr3_2:80375837-80375856 | Msa0429170:CDS | 35.0% | |
| CAACTCCATAAACAATGACA+CGG | - | chr3_2:80375869-80375888 | None:intergenic | 35.0% | |
| GTCATTGTTTATGGAGTTGT+TGG | + | chr3_2:80375870-80375889 | Msa0429170:CDS | 35.0% | |
| CATGAATCATCACACTTGAA+AGG | - | chr3_2:80376150-80376169 | None:intergenic | 35.0% | |
| ! | ATTTTCTGTAGCATGTAGGA+TGG | + | chr3_2:80376356-80376375 | Msa0429170:intron | 35.0% |
| TTCACACTCAACTTGTGATT+AGG | - | chr3_2:80376430-80376449 | None:intergenic | 35.0% | |
| TCCAGAAAATCAAGCTCTTA+TGG | + | chr3_2:80376731-80376750 | Msa0429170:CDS | 35.0% | |
| ! | ACCATAAGAGCTTGATTTTC+TGG | - | chr3_2:80376735-80376754 | None:intergenic | 35.0% |
| GAACCAAGACTGAAGATAAA+GGG | - | chr3_2:80376829-80376848 | None:intergenic | 35.0% | |
| AGAACCAAGACTGAAGATAA+AGG | - | chr3_2:80376830-80376849 | None:intergenic | 35.0% | |
| !! | GGTTCTGAAAGGAAGTTATA+AGG | + | chr3_2:80376844-80376863 | Msa0429170:intron | 35.0% |
| ! | AAAGTACCAATTAGGCTTGT+AGG | + | chr3_2:80376903-80376922 | Msa0429170:intron | 35.0% |
| CTAGAAATGTAAACAAGCAG+AGG | - | chr3_2:80376958-80376977 | None:intergenic | 35.0% | |
| AGCAAAACCATAGGGTTAAA+TGG | - | chr3_2:80377010-80377029 | None:intergenic | 35.0% | |
| TGAATAGCAGCAAAACCATA+GGG | - | chr3_2:80377018-80377037 | None:intergenic | 35.0% | |
| ! | AAAAGCTTTTGTAAGCACTC+TGG | - | chr3_2:80377147-80377166 | None:intergenic | 35.0% |
| AGGCAATACATAAATGACAC+AGG | - | chr3_2:80377229-80377248 | None:intergenic | 35.0% | |
| AATCTAGTCTCACCTTAACA+CGG | - | chr3_2:80377507-80377526 | None:intergenic | 35.0% | |
| AGCAACTCAATTGTATTAGC+TGG | + | chr3_2:80377638-80377657 | Msa0429170:intron | 35.0% | |
| TTTCCATGTGATAAAACAGG+AGG | + | chr3_2:80378129-80378148 | Msa0429170:intron | 35.0% | |
| TCTAAGAAGATCCAAGAGAA+TGG | - | chr3_2:80378155-80378174 | None:intergenic | 35.0% | |
| TGTACATCTTCTGAATTGTG+CGG | - | chr3_2:80378216-80378235 | None:intergenic | 35.0% | |
| AATTTGTGAATGGGAAAGAG+TGG | - | chr3_2:80378306-80378325 | None:intergenic | 35.0% | |
| !! | GTTGAAGGCTTAGCTTTATA+AGG | - | chr3_2:80378331-80378350 | None:intergenic | 35.0% |
| TATCAAGGTTTCACGAATCT+TGG | - | chr3_2:80378386-80378405 | None:intergenic | 35.0% | |
| ! | ATTCGTGAAACCTTGATAAC+TGG | + | chr3_2:80378388-80378407 | Msa0429170:CDS | 35.0% |
| AGATTCAGAGGCTAAATTTC+GGG | - | chr3_2:80378509-80378528 | None:intergenic | 35.0% | |
| TGGATTATCAGAAGATTCAG+AGG | - | chr3_2:80378521-80378540 | None:intergenic | 35.0% | |
| TTCTGATAATCCAGTTCAGA+AGG | + | chr3_2:80378528-80378547 | Msa0429170:CDS | 35.0% | |
| TTATCAAGCTTATGTCAAGC+TGG | + | chr3_2:80378722-80378741 | Msa0429170:three_prime_UTR | 35.0% | |
| TATCAAGCTTATGTCAAGCT+GGG | + | chr3_2:80378723-80378742 | Msa0429170:three_prime_UTR | 35.0% | |
| TCTCTCTCCAACAGTATCTA+AGG | + | chr3_2:80373029-80373048 | Msa0429170:five_prime_UTR | 40.0% | |
| ! | TAGAAGGTACAGGCTTATGT+TGG | - | chr3_2:80373648-80373667 | None:intergenic | 40.0% |
| TGACAGAGTTATCAGTGCAT+AGG | - | chr3_2:80374038-80374057 | None:intergenic | 40.0% | |
| AAAGGCTTTCTTTGACATGC+TGG | + | chr3_2:80374146-80374165 | Msa0429170:intron | 40.0% | |
| AAGGCTTTCTTTGACATGCT+GGG | + | chr3_2:80374147-80374166 | Msa0429170:intron | 40.0% | |
| !! | GATGATGGGAAATAACCATG+CGG | - | chr3_2:80374242-80374261 | None:intergenic | 40.0% |
| TTTCCCATCATCCTTTCGTA+TGG | + | chr3_2:80374250-80374269 | Msa0429170:intron | 40.0% | |
| GTTACCATACGAAAGGATGA+TGG | - | chr3_2:80374257-80374276 | None:intergenic | 40.0% | |
| TGAGAGAGTTACCATACGAA+AGG | - | chr3_2:80374264-80374283 | None:intergenic | 40.0% | |
| !! | GGTTTTCCTTTTAGGAGAAG+CGG | + | chr3_2:80374335-80374354 | Msa0429170:intron | 40.0% |
| TGGAGGAGTGAGTAGTTATT+GGG | + | chr3_2:80374364-80374383 | Msa0429170:intron | 40.0% | |
| AAGCCAATTATACCAAGAGC+GGG | - | chr3_2:80374633-80374652 | None:intergenic | 40.0% | |
| ! | ATTTTCAACCTTTGCTGCTG+TGG | + | chr3_2:80374851-80374870 | Msa0429170:CDS | 40.0% |
| AGGTATCTTTCTGGATCAGA+AGG | + | chr3_2:80374895-80374914 | Msa0429170:intron | 40.0% | |
| ACGTCAAGGTGCATACAAAT+AGG | - | chr3_2:80374947-80374966 | None:intergenic | 40.0% | |
| ACCTTGACGTAAACTGTTTC+AGG | + | chr3_2:80374957-80374976 | Msa0429170:intron | 40.0% | |
| CCTTGACGTAAACTGTTTCA+GGG | + | chr3_2:80374958-80374977 | Msa0429170:intron | 40.0% | |
| CTTGACGTAAACTGTTTCAG+GGG | + | chr3_2:80374959-80374978 | Msa0429170:intron | 40.0% | |
| !! | GTTTTTGATTGCACGACTAG+TGG | - | chr3_2:80374992-80375011 | None:intergenic | 40.0% |
| !!! | CCAGTCCGATTTTAAAGCAA+CGG | + | chr3_2:80375011-80375030 | Msa0429170:CDS | 40.0% |
| !! | AGCAGCCGTTGCTTTAAAAT+CGG | - | chr3_2:80375019-80375038 | None:intergenic | 40.0% |
| ACAGTAGGCAAATGTAAGCA+CGG | - | chr3_2:80375065-80375084 | None:intergenic | 40.0% | |
| CATTTGCCTACTGTTCTTCA+AGG | + | chr3_2:80375071-80375090 | Msa0429170:CDS | 40.0% | |
| CACACACATGAATGGAAACA+TGG | - | chr3_2:80375590-80375609 | None:intergenic | 40.0% | |
| GAGCTTTGCATTTACATTCC+AGG | - | chr3_2:80375763-80375782 | None:intergenic | 40.0% | |
| ACAGTATTGCTTTCACTTGC+AGG | + | chr3_2:80375934-80375953 | Msa0429170:CDS | 40.0% | |
| TCCTTAAGAGCAACTCTTCA+CGG | + | chr3_2:80376069-80376088 | Msa0429170:intron | 40.0% | |
| GTGTGATGATTCATGCAACT+CGG | + | chr3_2:80376155-80376174 | Msa0429170:CDS | 40.0% | |
| ATCCGCTCATTCACAACAAA+TGG | - | chr3_2:80376181-80376200 | None:intergenic | 40.0% | |
| AAAATGGAAACCACTCACGT+TGG | - | chr3_2:80376297-80376316 | None:intergenic | 40.0% | |
| AGTTGAGTGTGAATGTTGTG+AGG | + | chr3_2:80376437-80376456 | Msa0429170:CDS | 40.0% | |
| AAGATTGATGTGAGTGCTCT+TGG | + | chr3_2:80376526-80376545 | Msa0429170:intron | 40.0% | |
| TGTGAGTGCTCTTGGTTTAA+TGG | + | chr3_2:80376534-80376553 | Msa0429170:intron | 40.0% | |
| GCTATCGCATCTTAAAACTG+AGG | + | chr3_2:80376588-80376607 | Msa0429170:intron | 40.0% | |
| ! | ATTGCACAGAAGGGTTTTTC+TGG | + | chr3_2:80376698-80376717 | Msa0429170:CDS | 40.0% |
| CTTCCCTTTATCTTCAGTCT+TGG | + | chr3_2:80376823-80376842 | Msa0429170:intron | 40.0% | |
| !! | TCTTCAGTCTTGGTTCTGAA+AGG | + | chr3_2:80376833-80376852 | Msa0429170:intron | 40.0% |
| ATGCTATGAGATGCATCTCA+AGG | - | chr3_2:80376874-80376893 | None:intergenic | 40.0% | |
| TACTAGGCCATTTAACCCTA+TGG | + | chr3_2:80377000-80377019 | Msa0429170:intron | 40.0% | |
| GTGAATAGCAGCAAAACCAT+AGG | - | chr3_2:80377019-80377038 | None:intergenic | 40.0% | |
| !! | TGAAGAGTATCTCCGTGTTA+AGG | + | chr3_2:80377492-80377511 | Msa0429170:CDS | 40.0% |
| CTAGATTGACGATAGCAACT+TGG | + | chr3_2:80377520-80377539 | Msa0429170:intron | 40.0% | |
| CTTAGAGTCATCAGTCATCA+TGG | + | chr3_2:80378169-80378188 | Msa0429170:CDS | 40.0% | |
| ATCTTCTGAATTGTGCGGAT+GGG | - | chr3_2:80378211-80378230 | None:intergenic | 40.0% | |
| GTGAAAAAATTGCCGCAACA+TGG | + | chr3_2:80378425-80378444 | Msa0429170:CDS | 40.0% | |
| ! | GGGTGATGTTTCTGATTTAG+AGG | - | chr3_2:80378554-80378573 | None:intergenic | 40.0% |
| !!! | ACACAGCTGTCTTTTTTAGC+TGG | + | chr3_2:80378630-80378649 | Msa0429170:exon | 40.0% |
| !!! | CACAGCTGTCTTTTTTAGCT+GGG | + | chr3_2:80378631-80378650 | Msa0429170:three_prime_UTR | 40.0% |
| TAATACTAGACTGCCCTCAA+TGG | - | chr3_2:80378705-80378724 | None:intergenic | 40.0% | |
| TTGTCGCCTTCAATCATCCA+CGG | + | chr3_2:80373447-80373466 | Msa0429170:CDS | 45.0% | |
| ! | ACAGTAGCCACTTTCAACAG+CGG | - | chr3_2:80373727-80373746 | None:intergenic | 45.0% |
| TGGCTACTGTTTCGTTGTCA+AGG | + | chr3_2:80373737-80373756 | Msa0429170:CDS | 45.0% | |
| ! | GACTTTGTGGTGCCAAACTT+TGG | + | chr3_2:80374314-80374333 | Msa0429170:intron | 45.0% |
| !! | TTTCCTTTTAGGAGAAGCGG+TGG | + | chr3_2:80374338-80374357 | Msa0429170:intron | 45.0% |
| GTGGAGGAGTGAGTAGTTAT+TGG | + | chr3_2:80374363-80374382 | Msa0429170:intron | 45.0% | |
| ! | TTTAGAGTTTCGGTGCGGTT+CGG | - | chr3_2:80374396-80374415 | None:intergenic | 45.0% |
| CTTCAATTAATCCCCGCTCT+TGG | + | chr3_2:80374618-80374637 | Msa0429170:CDS | 45.0% | |
| ATCCCCGCTCTTGGTATAAT+TGG | + | chr3_2:80374627-80374646 | Msa0429170:CDS | 45.0% | |
| AGCCAATTATACCAAGAGCG+GGG | - | chr3_2:80374632-80374651 | None:intergenic | 45.0% | |
| CCCTGAAACAGTTTACGTCA+AGG | - | chr3_2:80374961-80374980 | None:intergenic | 45.0% | |
| !! | CCGTTGCTTTAAAATCGGAC+TGG | - | chr3_2:80375014-80375033 | None:intergenic | 45.0% |
| !! | GTTAATTATGAGGGTGCTCC+TGG | + | chr3_2:80375742-80375761 | Msa0429170:intron | 45.0% |
| ! | TGCTGCCGTGTCATTGTTTA+TGG | + | chr3_2:80375861-80375880 | Msa0429170:CDS | 45.0% |
| !! | GGCCATTTGTTGTGAATGAG+CGG | + | chr3_2:80376176-80376195 | Msa0429170:CDS | 45.0% |
| !! | TGAGGTTTCTGGTAGAGTTG+AGG | + | chr3_2:80376222-80376241 | Msa0429170:CDS | 45.0% |
| TTCTGTAGCATGTAGGATGG+TGG | + | chr3_2:80376359-80376378 | Msa0429170:intron | 45.0% | |
| TGGTCACCAACAGTAGTTAG+AGG | + | chr3_2:80376379-80376398 | Msa0429170:CDS | 45.0% | |
| TCAGCACCTCTAACTACTGT+TGG | - | chr3_2:80376388-80376407 | None:intergenic | 45.0% | |
| ! | TCACCTTGCTATCAGTCACT+TGG | + | chr3_2:80376495-80376514 | Msa0429170:CDS | 45.0% |
| CATCCAAGTGACTGATAGCA+AGG | - | chr3_2:80376501-80376520 | None:intergenic | 45.0% | |
| CTTGCGCATATCAGCTATGA+TGG | - | chr3_2:80376643-80376662 | None:intergenic | 45.0% | |
| CATCATAGCTGATATGCGCA+AGG | + | chr3_2:80376641-80376660 | Msa0429170:CDS | 45.0% | |
| ! | AGCTGATATGCGCAAGGTTT+TGG | + | chr3_2:80376647-80376666 | Msa0429170:CDS | 45.0% |
| ATGCATCTCATAGCATAGCC+AGG | + | chr3_2:80376878-80376897 | Msa0429170:intron | 45.0% | |
| TGCATCTCATAGCATAGCCA+GGG | + | chr3_2:80376879-80376898 | Msa0429170:intron | 45.0% | |
| CTACAGCCTACAAGCCTAAT+TGG | - | chr3_2:80376912-80376931 | None:intergenic | 45.0% | |
| ATTGCCACCGTAGTTGAATC+AGG | + | chr3_2:80377041-80377060 | Msa0429170:intron | 45.0% | |
| GAAACCTGATTCAACTACGG+TGG | - | chr3_2:80377048-80377067 | None:intergenic | 45.0% | |
| ! | TGATTGGCTATCTTCACCCA+TGG | + | chr3_2:80377273-80377292 | Msa0429170:intron | 45.0% |
| AAATGCTTCATTGCCGCCAT+GGG | - | chr3_2:80377292-80377311 | None:intergenic | 45.0% | |
| TAAATGCTTCATTGCCGCCA+TGG | - | chr3_2:80377293-80377312 | None:intergenic | 45.0% | |
| ! | TGGCCTCCTGTTTTATCACA+TGG | - | chr3_2:80378135-80378154 | None:intergenic | 45.0% |
| AAAACAGGAGGCCATTCTCT+TGG | + | chr3_2:80378141-80378160 | Msa0429170:intron | 45.0% | |
| TCATCAGTCATCATGGAGCT+CGG | + | chr3_2:80378176-80378195 | Msa0429170:CDS | 45.0% | |
| CATCTTCTGAATTGTGCGGA+TGG | - | chr3_2:80378212-80378231 | None:intergenic | 45.0% | |
| GTGAAAATGGGGTCGTCAAA+TGG | - | chr3_2:80378262-80378281 | None:intergenic | 45.0% | |
| CTCTCGAACGAGTGAAAATG+GGG | - | chr3_2:80378273-80378292 | None:intergenic | 45.0% | |
| GCTCTCGAACGAGTGAAAAT+GGG | - | chr3_2:80378274-80378293 | None:intergenic | 45.0% | |
| TGCTCTCGAACGAGTGAAAA+TGG | - | chr3_2:80378275-80378294 | None:intergenic | 45.0% | |
| TTTCACTCGTTCGAGAGCAA+AGG | + | chr3_2:80378276-80378295 | Msa0429170:CDS | 45.0% | |
| TTCACTCGTTCGAGAGCAAA+GGG | + | chr3_2:80378277-80378296 | Msa0429170:CDS | 45.0% | |
| TGGGACTTTACACTGGATGA+GGG | - | chr3_2:80378454-80378473 | None:intergenic | 45.0% | |
| CTTATCCTGGGACTTTACAC+TGG | - | chr3_2:80378461-80378480 | None:intergenic | 45.0% | |
| GATTTAGAGGCCTTCTGAAC+TGG | - | chr3_2:80378541-80378560 | None:intergenic | 45.0% | |
| CCTCAATGGCTAATCAGCTA+GGG | - | chr3_2:80378691-80378710 | None:intergenic | 45.0% | |
| ! | CCTAGCTGATTAGCCATTGA+GGG | + | chr3_2:80378689-80378708 | Msa0429170:three_prime_UTR | 45.0% |
| CTTATGTCAAGCTGGGTCTA+TGG | + | chr3_2:80378730-80378749 | Msa0429170:three_prime_UTR | 45.0% | |
| ACCATGCCGTGGATGATTGA+AGG | - | chr3_2:80373456-80373475 | None:intergenic | 50.0% | |
| CAATCATCCACGGCATGGTT+TGG | + | chr3_2:80373457-80373476 | Msa0429170:CDS | 50.0% | |
| AGACATACCAAACCATGCCG+TGG | - | chr3_2:80373467-80373486 | None:intergenic | 50.0% | |
| ! | TTTGTTGTGTCGGTCTGCCT+TGG | + | chr3_2:80373678-80373697 | Msa0429170:CDS | 50.0% |
| CACAAAAGCTTCAGACCGCA+TGG | + | chr3_2:80374224-80374243 | Msa0429170:intron | 50.0% | |
| GGAGAAATAGAGCCCTGCAA+CGG | - | chr3_2:80374686-80374705 | None:intergenic | 50.0% | |
| AACCTTTGCTGCTGTGGACT+GGG | + | chr3_2:80374857-80374876 | Msa0429170:CDS | 50.0% | |
| CTGCTCTGCAGGTATCTTTC+TGG | + | chr3_2:80374886-80374905 | Msa0429170:intron | 50.0% | |
| TAGAACGCCGACAACAACTG+TGG | - | chr3_2:80375124-80375143 | None:intergenic | 50.0% | |
| GCAGGTCGTGAGGTACAATA+AGG | + | chr3_2:80375952-80375971 | Msa0429170:intron | 50.0% | |
| GCCGTGAAGAGTTGCTCTTA+AGG | - | chr3_2:80376073-80376092 | None:intergenic | 50.0% | |
| ! | GCACAGAAGGGTTTTTCTGG+AGG | + | chr3_2:80376701-80376720 | Msa0429170:CDS | 50.0% |
| ! | GCCAGGGCAAAGTACCAATT+AGG | + | chr3_2:80376895-80376914 | Msa0429170:intron | 50.0% |
| GCCTAATTGGTACTTTGCCC+TGG | - | chr3_2:80376899-80376918 | None:intergenic | 50.0% | |
| AGGCTTGTAGGCTGTAGCTA+TGG | + | chr3_2:80376915-80376934 | Msa0429170:intron | 50.0% | |
| TTGGCTATCTTCACCCATGG+CGG | + | chr3_2:80377276-80377295 | Msa0429170:intron | 50.0% | |
| GCTGATATCGGAGATTGTCC+AGG | + | chr3_2:80377838-80377857 | Msa0429170:intron | 50.0% | |
| CTGGGACTTTACACTGGATG+AGG | - | chr3_2:80378455-80378474 | None:intergenic | 50.0% | |
| CTCATCCAGTGTAAAGTCCC+AGG | + | chr3_2:80378453-80378472 | Msa0429170:CDS | 50.0% | |
| ! | CCCTAGCTGATTAGCCATTG+AGG | + | chr3_2:80378688-80378707 | Msa0429170:three_prime_UTR | 50.0% |
| CCCTCAATGGCTAATCAGCT+AGG | - | chr3_2:80378692-80378711 | None:intergenic | 50.0% | |
| GTCAAGCTGGGTCTATGGAA+TGG | + | chr3_2:80378735-80378754 | Msa0429170:three_prime_UTR | 50.0% | |
| GCTGGGTCTATGGAATGGTT+CGG | + | chr3_2:80378740-80378759 | Msa0429170:three_prime_UTR | 50.0% | |
| !! | GGTCTATGGAATGGTTCGGT+TGG | + | chr3_2:80378744-80378763 | Msa0429170:three_prime_UTR | 50.0% |
| GCCTTCAATCATCCACGGCA+TGG | + | chr3_2:80373452-80373471 | Msa0429170:CDS | 55.0% | |
| TGAGGCTCCGCTGTTGAAAG+TGG | + | chr3_2:80373717-80373736 | Msa0429170:CDS | 55.0% | |
| TGAGATTTGTGTCGGGCGTG+TGG | + | chr3_2:80374292-80374311 | Msa0429170:intron | 55.0% | |
| !! | CCTTTTAGGAGAAGCGGTGG+CGG | + | chr3_2:80374341-80374360 | Msa0429170:intron | 55.0% |
| CAACCTTTGCTGCTGTGGAC+TGG | + | chr3_2:80374856-80374875 | Msa0429170:CDS | 55.0% | |
| ! | ACCTTTGCTGCTGTGGACTG+GGG | + | chr3_2:80374858-80374877 | Msa0429170:CDS | 55.0% |
| TCTCTCCGCACAGAAGTGGT+TGG | + | chr3_2:80375894-80375913 | Msa0429170:CDS | 55.0% | |
| AGCAGCCAACCACTTCTGTG+CGG | - | chr3_2:80375902-80375921 | None:intergenic | 55.0% | |
| ! | TGGTTGGCTGCTGGTGGTAT+GGG | + | chr3_2:80375910-80375929 | Msa0429170:CDS | 55.0% |
| GCTTTCACTTGCAGGTCGTG+AGG | + | chr3_2:80375942-80375961 | Msa0429170:CDS | 55.0% | |
| GCGAACTGATCCAACGTGAG+TGG | + | chr3_2:80376284-80376303 | Msa0429170:intron | 55.0% | |
| CTGAATTGTGCGGATGGGTG+TGG | - | chr3_2:80378206-80378225 | None:intergenic | 55.0% | |
| ! | GTGTCGGTCTGCCTTGGTAC+CGG | + | chr3_2:80373684-80373703 | Msa0429170:CDS | 60.0% |
| TGTCGGGCGTGTGGACTTTG+TGG | + | chr3_2:80374301-80374320 | Msa0429170:intron | 60.0% | |
| CCGCCACCGCTTCTCCTAAA+AGG | - | chr3_2:80374344-80374363 | None:intergenic | 60.0% | |
| ! | TTTAGGAGAAGCGGTGGCGG+TGG | + | chr3_2:80374344-80374363 | Msa0429170:intron | 60.0% |
| AACCTCTCCTACGCCGTTGC+AGG | + | chr3_2:80374670-80374689 | Msa0429170:CDS | 60.0% | |
| ACCTCTCCTACGCCGTTGCA+GGG | + | chr3_2:80374671-80374690 | Msa0429170:CDS | 60.0% | |
| ATAGAGCCCTGCAACGGCGT+AGG | - | chr3_2:80374680-80374699 | None:intergenic | 60.0% | |
| ACCCCAGTCCACAGCAGCAA+AGG | - | chr3_2:80374862-80374881 | None:intergenic | 60.0% | |
| CTGGGGTAATGCTGCTCTGC+AGG | + | chr3_2:80374875-80374894 | Msa0429170:CDS | 60.0% | |
| TGGGTCTCTCCGCACAGAAG+TGG | + | chr3_2:80375890-80375909 | Msa0429170:CDS | 60.0% | |
| ! | GCACAGAAGTGGTTGGCTGC+TGG | + | chr3_2:80375901-80375920 | Msa0429170:CDS | 60.0% |
| ! | CAGAAGTGGTTGGCTGCTGG+TGG | + | chr3_2:80375904-80375923 | Msa0429170:CDS | 60.0% |
| ! | GTGGTTGGCTGCTGGTGGTA+TGG | + | chr3_2:80375909-80375928 | Msa0429170:CDS | 60.0% |
| !! | GGATGAGGGCGTCCATGTTG+CGG | - | chr3_2:80378440-80378459 | None:intergenic | 60.0% |
| ACACGCTCCAGCCGGTACCA+AGG | - | chr3_2:80373698-80373717 | None:intergenic | 65.0% | |
| !! | CGGTCTGCCTTGGTACCGGC+TGG | + | chr3_2:80373688-80373707 | Msa0429170:CDS | 70.0% |
| !! | GGTACCGGCTGGAGCGTGTG+AGG | + | chr3_2:80373699-80373718 | Msa0429170:CDS | 70.0% |
| GGAGCCTCACACGCTCCAGC+CGG | - | chr3_2:80373706-80373725 | None:intergenic | 70.0% | |
| ! | AGGAGAAGCGGTGGCGGTGG+AGG | + | chr3_2:80374347-80374366 | Msa0429170:intron | 70.0% |
| GCCCTGCAACGGCGTAGGAG+AGG | - | chr3_2:80374675-80374694 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 80372878 | 80378949 | 80372878 | ID=Msa0429170;Name=Msa0429170 |
| chr3_2 | mRNA | 80372878 | 80378949 | 80372878 | ID=Msa0429170-mRNA-1;Parent=Msa0429170;Name=Msa0429170-mRNA-1;_AED=0.07;_eAED=0.07;_QI=183|1|1|1|0.84|0.85|14|319|604 |
| chr3_2 | exon | 80372878 | 80373050 | 80372878 | ID=Msa0429170-mRNA-1:exon:21929;Parent=Msa0429170-mRNA-1 |
| chr3_2 | exon | 80373204 | 80373330 | 80373204 | ID=Msa0429170-mRNA-1:exon:21930;Parent=Msa0429170-mRNA-1 |
| chr3_2 | exon | 80373419 | 80373478 | 80373419 | ID=Msa0429170-mRNA-1:exon:21931;Parent=Msa0429170-mRNA-1 |
| chr3_2 | exon | 80373604 | 80373758 | 80373604 | ID=Msa0429170-mRNA-1:exon:21932;Parent=Msa0429170-mRNA-1 |
| chr3_2 | exon | 80374584 | 80374710 | 80374584 | ID=Msa0429170-mRNA-1:exon:21933;Parent=Msa0429170-mRNA-1 |
| chr3_2 | exon | 80374799 | 80374896 | 80374799 | ID=Msa0429170-mRNA-1:exon:21934;Parent=Msa0429170-mRNA-1 |
| chr3_2 | exon | 80374979 | 80375092 | 80374979 | ID=Msa0429170-mRNA-1:exon:21935;Parent=Msa0429170-mRNA-1 |
| chr3_2 | exon | 80375502 | 80375562 | 80375502 | ID=Msa0429170-mRNA-1:exon:21936;Parent=Msa0429170-mRNA-1 |
| chr3_2 | exon | 80375814 | 80375963 | 80375814 | ID=Msa0429170-mRNA-1:exon:21937;Parent=Msa0429170-mRNA-1 |
| chr3_2 | exon | 80376133 | 80376243 | 80376133 | ID=Msa0429170-mRNA-1:exon:21938;Parent=Msa0429170-mRNA-1 |
| chr3_2 | exon | 80376367 | 80376534 | 80376367 | ID=Msa0429170-mRNA-1:exon:21939;Parent=Msa0429170-mRNA-1 |
| chr3_2 | exon | 80376639 | 80376752 | 80376639 | ID=Msa0429170-mRNA-1:exon:21940;Parent=Msa0429170-mRNA-1 |
| chr3_2 | exon | 80377457 | 80377513 | 80377457 | ID=Msa0429170-mRNA-1:exon:21941;Parent=Msa0429170-mRNA-1 |
| chr3_2 | exon | 80378148 | 80378949 | 80378148 | ID=Msa0429170-mRNA-1:exon:21942;Parent=Msa0429170-mRNA-1 |
| chr3_2 | five_prime_UTR | 80372878 | 80373050 | 80372878 | ID=Msa0429170-mRNA-1:five_prime_utr;Parent=Msa0429170-mRNA-1 |
| chr3_2 | five_prime_UTR | 80373204 | 80373213 | 80373204 | ID=Msa0429170-mRNA-1:five_prime_utr;Parent=Msa0429170-mRNA-1 |
| chr3_2 | CDS | 80373214 | 80373330 | 80373214 | ID=Msa0429170-mRNA-1:cds;Parent=Msa0429170-mRNA-1 |
| chr3_2 | CDS | 80373419 | 80373478 | 80373419 | ID=Msa0429170-mRNA-1:cds;Parent=Msa0429170-mRNA-1 |
| chr3_2 | CDS | 80373604 | 80373758 | 80373604 | ID=Msa0429170-mRNA-1:cds;Parent=Msa0429170-mRNA-1 |
| chr3_2 | CDS | 80374584 | 80374710 | 80374584 | ID=Msa0429170-mRNA-1:cds;Parent=Msa0429170-mRNA-1 |
| chr3_2 | CDS | 80374799 | 80374896 | 80374799 | ID=Msa0429170-mRNA-1:cds;Parent=Msa0429170-mRNA-1 |
| chr3_2 | CDS | 80374979 | 80375092 | 80374979 | ID=Msa0429170-mRNA-1:cds;Parent=Msa0429170-mRNA-1 |
| chr3_2 | CDS | 80375502 | 80375562 | 80375502 | ID=Msa0429170-mRNA-1:cds;Parent=Msa0429170-mRNA-1 |
| chr3_2 | CDS | 80375814 | 80375963 | 80375814 | ID=Msa0429170-mRNA-1:cds;Parent=Msa0429170-mRNA-1 |
| chr3_2 | CDS | 80376133 | 80376243 | 80376133 | ID=Msa0429170-mRNA-1:cds;Parent=Msa0429170-mRNA-1 |
| chr3_2 | CDS | 80376367 | 80376534 | 80376367 | ID=Msa0429170-mRNA-1:cds;Parent=Msa0429170-mRNA-1 |
| chr3_2 | CDS | 80376639 | 80376752 | 80376639 | ID=Msa0429170-mRNA-1:cds;Parent=Msa0429170-mRNA-1 |
| chr3_2 | CDS | 80377457 | 80377513 | 80377457 | ID=Msa0429170-mRNA-1:cds;Parent=Msa0429170-mRNA-1 |
| chr3_2 | CDS | 80378148 | 80378630 | 80378148 | ID=Msa0429170-mRNA-1:cds;Parent=Msa0429170-mRNA-1 |
| chr3_2 | three_prime_UTR | 80378631 | 80378949 | 80378631 | ID=Msa0429170-mRNA-1:three_prime_utr;Parent=Msa0429170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
