AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0379850


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0379850 MtrunA17_Chr3g0132961 95.581 611 19 2 1 611 1 603 0.0 1203
Msa0379850 MtrunA17_Chr3g0132931 62.010 587 199 9 11 589 10 580 0.0 698
Msa0379850 MtrunA17_Chr5g0412241 57.661 496 189 8 87 573 72 555 0.0 571
Msa0379850 MtrunA17_Chr3g0132941 35.149 202 75 9 331 521 143 299 6.15e-15 76.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0379850 AT1G58200.2 54.735 528 212 6 77 590 66 580 0.0 571
Msa0379850 AT1G58200.1 54.735 528 212 6 77 590 66 580 0.0 571
Msa0379850 AT5G10490.1 49.917 603 264 9 13 604 1 576 0.0 560
Msa0379850 AT5G10490.3 51.042 576 254 7 37 604 19 574 0.0 555
Msa0379850 AT5G10490.2 53.510 527 228 5 78 604 39 548 0.0 554
Msa0379850 AT4G00290.1 25.957 235 151 7 240 471 276 490 3.89e-11 66.2

Find 151 sgRNAs with CRISPR-Local

Find 698 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTAGATGATAACAAAATT+TGG 0.123396 3_1:-81258210 None:intergenic
CACAATTTATGTGCATAATA+TGG 0.134816 3_1:-81258488 None:intergenic
TAAAATTCAGTTGCAAAATT+TGG 0.150816 3_1:+81252548 Msa0379850:five_prime_UTR
TGCTGCCGTGTCATTGTTTA+TGG 0.178720 3_1:+81255498 Msa0379850:CDS
ATCCCCGCTCTTGGTATAAT+TGG 0.180696 3_1:+81254264 Msa0379850:CDS
TGCTCTCGAACGAGTGAAAA+TGG 0.182392 3_1:-81257909 None:intergenic
ATAATTGGCTTTGCTATCTT+TGG 0.188913 3_1:+81254279 Msa0379850:CDS
ATTAAAGGATATGAGGTTTC+TGG 0.198213 3_1:+81255848 Msa0379850:CDS
CATAATCGATTACCGGAATT+AGG 0.223045 3_1:-81253059 None:intergenic
GCAACCTTTGCATATATAAA+TGG 0.224580 3_1:+81258414 Msa0379850:three_prime_UTR
TGTGAGTGCTCTTGGTTTAA+TGG 0.244095 3_1:+81256171 Msa0379850:CDS
CAACCTTTGCTGCTGTGGAC+TGG 0.249892 3_1:+81254493 Msa0379850:CDS
AACCTCTCCTACGCCGTTGC+AGG 0.261064 3_1:+81254307 Msa0379850:CDS
ATTAGATGATAACAAAATTT+GGG 0.273692 3_1:-81258209 None:intergenic
GGGTGATGTTTCTGATTTAG+AGG 0.275710 3_1:-81258188 None:intergenic
AGATTCAGAGGCTAAATTTC+GGG 0.275982 3_1:-81258143 None:intergenic
GGGATTAATTGAAGCATAAT+TGG 0.279859 3_1:-81254246 None:intergenic
GTTGAAGGCTTAGCTTTATA+AGG 0.287270 3_1:-81257965 None:intergenic
AGCTGATATGCGCAAGGTTT+TGG 0.287823 3_1:+81256284 Msa0379850:CDS
CATAATATGGGTAATCAGTT+AGG 0.296725 3_1:-81258475 None:intergenic
ACAGTATTGCTTTCACTTGC+AGG 0.308252 3_1:+81255571 Msa0379850:CDS
TTCGATTGTCTCATGACTTT+AGG 0.319511 3_1:+81252906 Msa0379850:CDS
AGGCAATACATTAGTAATAC+TGG 0.324900 3_1:+81252926 Msa0379850:CDS
AACCTTTGCTGCTGTGGACT+GGG 0.325778 3_1:+81254494 Msa0379850:CDS
ATTCGTGAAACCTTGATAAC+TGG 0.330316 3_1:+81258025 Msa0379850:CDS
TATCAAGGTTTCACGAATCT+TGG 0.330485 3_1:-81258020 None:intergenic
CGGATTAAAACAAAGATTAA+AGG 0.332484 3_1:+81255833 Msa0379850:CDS
TCCAGAAAATCAAGCTCTTA+TGG 0.340918 3_1:+81256368 Msa0379850:CDS
AATTCTACAATGACATATTC+AGG 0.347346 3_1:+81252878 Msa0379850:CDS
ATAGTAGTTGATTGAGTTGA+AGG 0.349386 3_1:-81257980 None:intergenic
GATTTAGAGGCCTTCTGAAC+TGG 0.357096 3_1:-81258175 None:intergenic
AAGCTGTATATACTGCAGTA+TGG 0.361800 3_1:+81255473 Msa0379850:CDS
GTGGTTGGCTGCTGGTGGTA+TGG 0.365271 3_1:+81255546 Msa0379850:CDS
ACTAGAGTTAGAACTCAAAT+TGG 0.367139 3_1:+81258448 Msa0379850:three_prime_UTR
TCTCTCTCCAACAGTATCTA+AGG 0.371637 3_1:+81252676 Msa0379850:five_prime_UTR
GTCATTGTTTATGGAGTTGT+TGG 0.376702 3_1:+81255507 Msa0379850:CDS
CTTATGTCAAGCTGGGTCTA+TGG 0.377770 3_1:+81258367 Msa0379850:three_prime_UTR
AAGATTCAGAGGCTAAATTT+CGG 0.378425 3_1:-81258144 None:intergenic
AGCAGCCGTTGCTTTAAAAT+CGG 0.381438 3_1:-81254653 None:intergenic
ATGTTGACTTTAACTTATCC+TGG 0.383411 3_1:-81258108 None:intergenic
AACAAAGATTAAAGGATATG+AGG 0.385214 3_1:+81255841 Msa0379850:CDS
GTGAAAATGGGGTCGTCAAA+TGG 0.395728 3_1:-81257896 None:intergenic
ACAATTTATGTGCATAATAT+GGG 0.395988 3_1:-81258487 None:intergenic
TTCACACTCAACTTGTGATT+AGG 0.403461 3_1:-81256064 None:intergenic
CAATCATCCACGGCATGGTT+TGG 0.405653 3_1:+81253094 Msa0379850:CDS
TGGTTGGCTGCTGGTGGTAT+GGG 0.409781 3_1:+81255547 Msa0379850:CDS
CTGGGGTAATGCTGCTCTGC+AGG 0.412173 3_1:+81254512 Msa0379850:CDS
AGGTCATGTAATGCTATATC+AGG 0.416426 3_1:+81254219 Msa0379850:intron
ATCTTTGAAACCAGTTATCA+AGG 0.419330 3_1:-81258035 None:intergenic
GTTTAATGCGTGTAATAAAC+AGG 0.422934 3_1:-81258559 None:intergenic
GCTCTCGAACGAGTGAAAAT+GGG 0.423150 3_1:-81257908 None:intergenic
AACAAAACATTACATCTAGA+AGG 0.427497 3_1:-81253298 None:intergenic
CATTTGCCTACTGTTCTTCA+AGG 0.430153 3_1:+81254708 Msa0379850:CDS
CAGATGAGCATTGATCTTAT+CGG 0.431050 3_1:+81255448 Msa0379850:intron
ATCCGCTCATTCACAACAAA+TGG 0.433039 3_1:-81255815 None:intergenic
CGGTCTGCCTTGGTACCGGC+TGG 0.433778 3_1:+81253325 Msa0379850:CDS
ACAAGCACAAAATTTCTGTA+TGG 0.446067 3_1:+81255148 Msa0379850:CDS
ATAACTGGTTTCAAAGATGA+AGG 0.457024 3_1:+81258040 Msa0379850:CDS
TTCAGTGGAACGATAAAAGT+TGG 0.457315 3_1:+81254431 Msa0379850:intron
TTATAAGGTGAATTTGTGAA+TGG 0.457800 3_1:-81257950 None:intergenic
GACAAAACATAATCGATTAC+CGG 0.463499 3_1:-81253066 None:intergenic
TATAAGGTGAATTTGTGAAT+GGG 0.464354 3_1:-81257949 None:intergenic
TGTTGACAGAAACCTAATTC+CGG 0.464569 3_1:+81253047 Msa0379850:intron
AGATGAGCATTGATCTTATC+GGG 0.466557 3_1:+81255449 Msa0379850:intron
TTCACTCGTTCGAGAGCAAA+GGG 0.468144 3_1:+81257914 Msa0379850:CDS
CTTATCCTGGGACTTTACAC+TGG 0.468864 3_1:-81258095 None:intergenic
ACCATGCCGTGGATGATTGA+AGG 0.469094 3_1:-81253090 None:intergenic
AAGATTGATGTGAGTGCTCT+TGG 0.470797 3_1:+81256163 Msa0379850:CDS
TGAAGAGTATCTCCGTGTTA+AGG 0.473513 3_1:+81257129 Msa0379850:CDS
CTTGCGCATATCAGCTATGA+TGG 0.477938 3_1:-81256277 None:intergenic
GCACAGAAGTGGTTGGCTGC+TGG 0.483881 3_1:+81255538 Msa0379850:CDS
TGGTCACCAACAGTAGTTAG+AGG 0.488933 3_1:+81256016 Msa0379850:CDS
AAAACAGGAGGCCATTCTCT+TGG 0.492432 3_1:+81257778 Msa0379850:intron
GGTCTATGGAATGGTTCGGT+TGG 0.498185 3_1:+81258381 Msa0379850:three_prime_UTR
CTTAGAGTCATCAGTCATCA+TGG 0.504609 3_1:+81257806 Msa0379850:CDS
CCCTAGCTGATTAGCCATTG+AGG 0.504678 3_1:+81258325 Msa0379850:three_prime_UTR
CCCTCAATGGCTAATCAGCT+AGG 0.508055 3_1:-81258326 None:intergenic
CCTAGCTGATTAGCCATTGA+GGG 0.510490 3_1:+81258326 Msa0379850:three_prime_UTR
CTGAATTGTGCGGATGGGTG+TGG 0.513236 3_1:-81257840 None:intergenic
GCTGGGTCTATGGAATGGTT+CGG 0.514432 3_1:+81258377 Msa0379850:three_prime_UTR
GTGTCGGTCTGCCTTGGTAC+CGG 0.515358 3_1:+81253321 Msa0379850:CDS
TTTGTTGTGTCGGTCTGCCT+TGG 0.519884 3_1:+81253315 Msa0379850:CDS
CTTCAATTAATCCCCGCTCT+TGG 0.524426 3_1:+81254255 Msa0379850:CDS
ATAATATGGGTAATCAGTTA+GGG 0.524874 3_1:-81258474 None:intergenic
TTATCAAGCTTATGTCAAGC+TGG 0.526521 3_1:+81258359 Msa0379850:three_prime_UTR
TCATTGTTTATGGAGTTGTT+GGG 0.529134 3_1:+81255508 Msa0379850:CDS
AAGCCAATTATACCAAGAGC+GGG 0.529821 3_1:-81254267 None:intergenic
TGTTGACTTTAACTTATCCT+GGG 0.529999 3_1:-81258107 None:intergenic
CTGGGACTTTACACTGGATG+AGG 0.533658 3_1:-81258089 None:intergenic
TTTCACTCGTTCGAGAGCAA+AGG 0.537364 3_1:+81257913 Msa0379850:CDS
AAACATGCCTTAGATACTGT+TGG 0.537438 3_1:-81252683 None:intergenic
CATATTATGCACATAAATTG+TGG 0.537790 3_1:+81258489 Msa0379850:three_prime_UTR
CTCATCCAGTGTAAAGTCCC+AGG 0.537833 3_1:+81258090 Msa0379850:CDS
AATCTACCTTGAAGAACAGT+AGG 0.538559 3_1:-81254714 None:intergenic
CATGAATCATCACACTTGAA+AGG 0.538831 3_1:-81255784 None:intergenic
AGCTGTATATACTGCAGTAT+GGG 0.539129 3_1:+81255474 Msa0379850:CDS
TAATACTAGACTGCCCTCAA+TGG 0.540488 3_1:-81258339 None:intergenic
CCGTTGCTTTAAAATCGGAC+TGG 0.548639 3_1:-81254648 None:intergenic
ACCTCTCCTACGCCGTTGCA+GGG 0.550012 3_1:+81254308 Msa0379850:CDS
TCAACCATTTATATATGCAA+AGG 0.550765 3_1:-81258418 None:intergenic
TGAGGTTTCTGGTAGAGTTG+AGG 0.552626 3_1:+81255859 Msa0379850:CDS
ATCTTAGTAAGAAAACTCAT+TGG 0.552673 3_1:+81256098 Msa0379850:CDS
TTCTGATAATCCAGTTCAGA+AGG 0.553518 3_1:+81258165 Msa0379850:CDS
GCCTTCAATCATCCACGGCA+TGG 0.556075 3_1:+81253089 Msa0379850:CDS
TAGAAGGTACAGGCTTATGT+TGG 0.558063 3_1:-81253282 None:intergenic
TGGCTACTGTTTCGTTGTCA+AGG 0.558304 3_1:+81253374 Msa0379850:CDS
TTGTCGCCTTCAATCATCCA+CGG 0.558946 3_1:+81253084 Msa0379850:CDS
CATCTTCTGAATTGTGCGGA+TGG 0.559810 3_1:-81257846 None:intergenic
GTCAAGCTGGGTCTATGGAA+TGG 0.560919 3_1:+81258372 Msa0379850:three_prime_UTR
GGCCATTTGTTGTGAATGAG+CGG 0.561264 3_1:+81255813 Msa0379850:CDS
TCAGCACCTCTAACTACTGT+TGG 0.561707 3_1:-81256022 None:intergenic
ACCTTTGCTGCTGTGGACTG+GGG 0.562252 3_1:+81254495 Msa0379850:CDS
GGATGAGGGCGTCCATGTTG+CGG 0.563662 3_1:-81258074 None:intergenic
TCTAAGAAGATCCAAGAGAA+TGG 0.567023 3_1:-81257789 None:intergenic
TGGGTCTCTCCGCACAGAAG+TGG 0.571017 3_1:+81255527 Msa0379850:CDS
GGTACCGGCTGGAGCGTGTG+AGG 0.573244 3_1:+81253336 Msa0379850:CDS
TATCAAGCTTATGTCAAGCT+GGG 0.575502 3_1:+81258360 Msa0379850:three_prime_UTR
TCTCTCCGCACAGAAGTGGT+TGG 0.580196 3_1:+81255531 Msa0379850:CDS
TGAGGCTCCGCTGTTGAAAG+TGG 0.580679 3_1:+81253354 Msa0379850:CDS
ATCTTCTGAATTGTGCGGAT+GGG 0.581018 3_1:-81257845 None:intergenic
ATAGAGCCCTGCAACGGCGT+AGG 0.581176 3_1:-81254314 None:intergenic
CTCTCGAACGAGTGAAAATG+GGG 0.581916 3_1:-81257907 None:intergenic
GCCCTGCAACGGCGTAGGAG+AGG 0.582945 3_1:-81254309 None:intergenic
TCACCTTGCTATCAGTCACT+TGG 0.584498 3_1:+81256132 Msa0379850:CDS
ACATTACATCTAGAAGGTAC+AGG 0.584956 3_1:-81253292 None:intergenic
ACCCCAGTCCACAGCAGCAA+AGG 0.591276 3_1:-81254496 None:intergenic
AATTTGTGAATGGGAAAGAG+TGG 0.592121 3_1:-81257940 None:intergenic
CATCCAAGTGACTGATAGCA+AGG 0.593216 3_1:-81256135 None:intergenic
CCTCAATGGCTAATCAGCTA+GGG 0.595650 3_1:-81258325 None:intergenic
GGAGCCTCACACGCTCCAGC+CGG 0.596349 3_1:-81253340 None:intergenic
TCATCAGTCATCATGGAGCT+CGG 0.597209 3_1:+81257813 Msa0379850:CDS
GCTTTCACTTGCAGGTCGTG+AGG 0.598539 3_1:+81255579 Msa0379850:CDS
TTCTGTAGCATGTAGGATGG+TGG 0.601690 3_1:+81255996 Msa0379850:intron
GTGTGATGATTCATGCAACT+CGG 0.610555 3_1:+81255792 Msa0379850:CDS
TTAGATGATAACAAAATTTG+GGG 0.623288 3_1:-81258208 None:intergenic
TGGATTATCAGAAGATTCAG+AGG 0.623721 3_1:-81258155 None:intergenic
ACACGCTCCAGCCGGTACCA+AGG 0.634927 3_1:-81253332 None:intergenic
CATCATAGCTGATATGCGCA+AGG 0.643564 3_1:+81256278 Msa0379850:CDS
CAGAAGTGGTTGGCTGCTGG+TGG 0.645748 3_1:+81255541 Msa0379850:CDS
CAACTCCATAAACAATGACA+CGG 0.645901 3_1:-81255503 None:intergenic
AAAGCCAATTATACCAAGAG+CGG 0.646228 3_1:-81254268 None:intergenic
ACAGTAGGCAAATGTAAGCA+CGG 0.647849 3_1:-81254699 None:intergenic
GGAGAAATAGAGCCCTGCAA+CGG 0.655517 3_1:-81254320 None:intergenic
AGACATACCAAACCATGCCG+TGG 0.659701 3_1:-81253101 None:intergenic
TGGGACTTTACACTGGATGA+GGG 0.659785 3_1:-81258088 None:intergenic
AATCTAGTCTCACCTTAACA+CGG 0.682332 3_1:-81257141 None:intergenic
AGCAGCCAACCACTTCTGTG+CGG 0.694661 3_1:-81255536 None:intergenic
TGTACATCTTCTGAATTGTG+CGG 0.699375 3_1:-81257850 None:intergenic
AGCCAATTATACCAAGAGCG+GGG 0.701628 3_1:-81254266 None:intergenic
ACAGTAGCCACTTTCAACAG+CGG 0.712676 3_1:-81253361 None:intergenic
AGTTGAGTGTGAATGTTGTG+AGG 0.723498 3_1:+81256074 Msa0379850:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAGAATAATTTTCAAAAAAT+AGG - chr3_1:81253737-81253756 None:intergenic 10.0%
!! ACACAAAAATAAATAAAAAA+GGG + chr3_1:81254858-81254877 Msa0379850:intron 10.0%
!!! TACTATCATTATTTTTTATT+TGG + chr3_1:81254952-81254971 Msa0379850:intron 10.0%
!!! TAACATTTTTCTAAAATAAT+GGG + chr3_1:81255249-81255268 Msa0379850:intron 10.0%
!!! TATTTTTATATCACTTAAAA+TGG - chr3_1:81255950-81255969 None:intergenic 10.0%
!!! TTTTTTGTAAACATAAAAAT+TGG - chr3_1:81257316-81257335 None:intergenic 10.0%
!!! TAGAATAATTTTCAAAAAAT+AGG - chr3_1:81253737-81253756 None:intergenic 10.0%
!! ACACAAAAATAAATAAAAAA+GGG + chr3_1:81254858-81254877 Msa0379850:intron 10.0%
!!! TACTATCATTATTTTTTATT+TGG + chr3_1:81254952-81254971 Msa0379850:intron 10.0%
!!! TAACATTTTTCTAAAATAAT+GGG + chr3_1:81255249-81255268 Msa0379850:intron 10.0%
!!! TATTTTTATATCACTTAAAA+TGG - chr3_1:81255950-81255969 None:intergenic 10.0%
!!! TTTTTTGTAAACATAAAAAT+TGG - chr3_1:81257316-81257335 None:intergenic 10.0%
!! ATATATATAGTTGTCAAAAA+TGG - chr3_1:81252757-81252776 None:intergenic 15.0%
!! TGAATAAAATTAAAACAGAA+GGG - chr3_1:81252791-81252810 None:intergenic 15.0%
!! ATGAATAAAATTAAAACAGA+AGG - chr3_1:81252792-81252811 None:intergenic 15.0%
!!! ATTTACTTCTGAATATTTTA+TGG + chr3_1:81253194-81253213 Msa0379850:intron 15.0%
!! TTGTTAGAATTAATGTAAAT+TGG + chr3_1:81253456-81253475 Msa0379850:intron 15.0%
!!! CATAATTTAATTTAGAGTTT+CGG - chr3_1:81254043-81254062 None:intergenic 15.0%
!!! TTATATTTTGAAATTGATGT+AGG + chr3_1:81254199-81254218 Msa0379850:intron 15.0%
!! CACACAAAAATAAATAAAAA+AGG + chr3_1:81254857-81254876 Msa0379850:intron 15.0%
!!! GTAACATTTTTCTAAAATAA+TGG + chr3_1:81255248-81255267 Msa0379850:intron 15.0%
!!! AATAATCCTATATATTTTAC+AGG - chr3_1:81255350-81255369 None:intergenic 15.0%
!!! TTTTGTCATTTACTTTTTTA+TGG + chr3_1:81255654-81255673 Msa0379850:intron 15.0%
!! ATGGTATTTAAAAAATTTAC+TGG + chr3_1:81256190-81256209 Msa0379850:intron 15.0%
!! TGGTATTTAAAAAATTTACT+GGG + chr3_1:81256191-81256210 Msa0379850:intron 15.0%
!!! CATTTATTTCATTAACATTT+TGG + chr3_1:81256944-81256963 Msa0379850:intron 15.0%
!! AAAAAGTAAAAAGTAAATCT+TGG - chr3_1:81257370-81257389 None:intergenic 15.0%
!! AATTGTTTCATCATAAAATA+TGG + chr3_1:81257665-81257684 Msa0379850:intron 15.0%
!! ATTAGATGATAACAAAATTT+GGG - chr3_1:81258212-81258231 None:intergenic 15.0%
!! ATATATATAGTTGTCAAAAA+TGG - chr3_1:81252757-81252776 None:intergenic 15.0%
!! TGAATAAAATTAAAACAGAA+GGG - chr3_1:81252791-81252810 None:intergenic 15.0%
!! ATGAATAAAATTAAAACAGA+AGG - chr3_1:81252792-81252811 None:intergenic 15.0%
!!! ATTTACTTCTGAATATTTTA+TGG + chr3_1:81253194-81253213 Msa0379850:intron 15.0%
!! TTGTTAGAATTAATGTAAAT+TGG + chr3_1:81253456-81253475 Msa0379850:intron 15.0%
!!! CATAATTTAATTTAGAGTTT+CGG - chr3_1:81254043-81254062 None:intergenic 15.0%
!!! TTATATTTTGAAATTGATGT+AGG + chr3_1:81254199-81254218 Msa0379850:intron 15.0%
!! CACACAAAAATAAATAAAAA+AGG + chr3_1:81254857-81254876 Msa0379850:intron 15.0%
!!! GTAACATTTTTCTAAAATAA+TGG + chr3_1:81255248-81255267 Msa0379850:intron 15.0%
!!! AATAATCCTATATATTTTAC+AGG - chr3_1:81255350-81255369 None:intergenic 15.0%
!!! TTTTGTCATTTACTTTTTTA+TGG + chr3_1:81255654-81255673 Msa0379850:intron 15.0%
!! ATGGTATTTAAAAAATTTAC+TGG + chr3_1:81256190-81256209 Msa0379850:intron 15.0%
!! TGGTATTTAAAAAATTTACT+GGG + chr3_1:81256191-81256210 Msa0379850:intron 15.0%
!!! CATTTATTTCATTAACATTT+TGG + chr3_1:81256944-81256963 Msa0379850:intron 15.0%
!! AAAAAGTAAAAAGTAAATCT+TGG - chr3_1:81257370-81257389 None:intergenic 15.0%
!! AATTGTTTCATCATAAAATA+TGG + chr3_1:81257665-81257684 Msa0379850:intron 15.0%
!! ATTAGATGATAACAAAATTT+GGG - chr3_1:81258212-81258231 None:intergenic 15.0%
!! TAAAATTCAGTTGCAAAATT+TGG + chr3_1:81252548-81252567 Msa0379850:five_prime_UTR 20.0%
!! TAATGTAAATTGGACAATTA+TGG + chr3_1:81253466-81253485 Msa0379850:intron 20.0%
!! GTGTAATTATTATGGTAATT+AGG + chr3_1:81253498-81253517 Msa0379850:intron 20.0%
!! TATTGTATTTAGGAATTAGT+AGG - chr3_1:81254166-81254185 None:intergenic 20.0%
!! AAAATTAGATACTAACTTCT+TGG - chr3_1:81254344-81254363 None:intergenic 20.0%
!! AATAAGCTTATCTTACAATT+AGG - chr3_1:81254806-81254825 None:intergenic 20.0%
!! CAAAAATAAATAAAAAAGGG+AGG + chr3_1:81254861-81254880 Msa0379850:intron 20.0%
!! AATTATCTAACTTACTGAAA+AGG + chr3_1:81255890-81255909 Msa0379850:intron 20.0%
!!! GTGATATAAAAATAGTTTTC+TGG + chr3_1:81255956-81255975 Msa0379850:intron 20.0%
!!! AATTTTTTTTGTTCTACTAG+AGG - chr3_1:81256318-81256337 None:intergenic 20.0%
!! ATAAACCAATTAACAGAAAA+AGG - chr3_1:81256400-81256419 None:intergenic 20.0%
!! TTGTCAAATTATACTATGAT+AGG + chr3_1:81256837-81256856 Msa0379850:intron 20.0%
!! TAAAAATTGGTGAAAAATTG+AGG - chr3_1:81257303-81257322 None:intergenic 20.0%
!! CACATAATAGCTTATTATAT+AGG + chr3_1:81257453-81257472 Msa0379850:intron 20.0%
!!! TATATTCAAGTCATTTTGTT+CGG + chr3_1:81257704-81257723 Msa0379850:intron 20.0%
!! TTAGATGATAACAAAATTTG+GGG - chr3_1:81258211-81258230 None:intergenic 20.0%
!! CATTAGATGATAACAAAATT+TGG - chr3_1:81258213-81258232 None:intergenic 20.0%
!! ACAATTTATGTGCATAATAT+GGG - chr3_1:81258490-81258509 None:intergenic 20.0%
!! TAAAATTCAGTTGCAAAATT+TGG + chr3_1:81252548-81252567 Msa0379850:five_prime_UTR 20.0%
!! TAATGTAAATTGGACAATTA+TGG + chr3_1:81253466-81253485 Msa0379850:intron 20.0%
!! GTGTAATTATTATGGTAATT+AGG + chr3_1:81253498-81253517 Msa0379850:intron 20.0%
!! TATTGTATTTAGGAATTAGT+AGG - chr3_1:81254166-81254185 None:intergenic 20.0%
!! AAAATTAGATACTAACTTCT+TGG - chr3_1:81254344-81254363 None:intergenic 20.0%
!! AATAAGCTTATCTTACAATT+AGG - chr3_1:81254806-81254825 None:intergenic 20.0%
!! CAAAAATAAATAAAAAAGGG+AGG + chr3_1:81254861-81254880 Msa0379850:intron 20.0%
!! AATTATCTAACTTACTGAAA+AGG + chr3_1:81255890-81255909 Msa0379850:intron 20.0%
!!! GTGATATAAAAATAGTTTTC+TGG + chr3_1:81255956-81255975 Msa0379850:intron 20.0%
!!! AATTTTTTTTGTTCTACTAG+AGG - chr3_1:81256318-81256337 None:intergenic 20.0%
!! ATAAACCAATTAACAGAAAA+AGG - chr3_1:81256400-81256419 None:intergenic 20.0%
!! TTGTCAAATTATACTATGAT+AGG + chr3_1:81256837-81256856 Msa0379850:intron 20.0%
!! TAAAAATTGGTGAAAAATTG+AGG - chr3_1:81257303-81257322 None:intergenic 20.0%
!! CACATAATAGCTTATTATAT+AGG + chr3_1:81257453-81257472 Msa0379850:intron 20.0%
!!! TATATTCAAGTCATTTTGTT+CGG + chr3_1:81257704-81257723 Msa0379850:intron 20.0%
!! TTAGATGATAACAAAATTTG+GGG - chr3_1:81258211-81258230 None:intergenic 20.0%
!! CATTAGATGATAACAAAATT+TGG - chr3_1:81258213-81258232 None:intergenic 20.0%
!! ACAATTTATGTGCATAATAT+GGG - chr3_1:81258490-81258509 None:intergenic 20.0%
! ATTCAAAACTGCAAAAAAAC+TGG - chr3_1:81252720-81252739 None:intergenic 25.0%
! AATTCTACAATGACATATTC+AGG + chr3_1:81252878-81252897 Msa0379850:CDS 25.0%
! AACAAAACATTACATCTAGA+AGG - chr3_1:81253301-81253320 None:intergenic 25.0%
!!! ATTTTATTGCATGATGGAAA+AGG - chr3_1:81253612-81253631 None:intergenic 25.0%
! TTTCCATCATGCAATAAAAT+TGG + chr3_1:81253612-81253631 Msa0379850:intron 25.0%
!! AAACCAATTTTATTGCATGA+TGG - chr3_1:81253618-81253637 None:intergenic 25.0%
!!! TGCAATAAAATTGGTTTGTT+TGG + chr3_1:81253621-81253640 Msa0379850:intron 25.0%
! GAAAATTATTCTACTTGCAA+TGG + chr3_1:81253744-81253763 Msa0379850:intron 25.0%
!! TATTTTCTTGAGATTTGTGT+CGG + chr3_1:81253921-81253940 Msa0379850:intron 25.0%
! GCATCAAATGATATGATTTA+TGG - chr3_1:81254102-81254121 None:intergenic 25.0%
! CCTTCATAGATATTGTATTT+AGG - chr3_1:81254176-81254195 None:intergenic 25.0%
! CCTAAATACAATATCTATGA+AGG + chr3_1:81254173-81254192 Msa0379850:intron 25.0%
!!! TTGATAACATATGTTTTCAG+TGG + chr3_1:81254416-81254435 Msa0379850:intron 25.0%
!! GGAATAAAAAAGTATAGACA+CGG + chr3_1:81254882-81254901 Msa0379850:intron 25.0%
!!! AACACATAATAGTAATGGAT+GGG - chr3_1:81255067-81255086 None:intergenic 25.0%
!! AAACACATAATAGTAATGGA+TGG - chr3_1:81255068-81255087 None:intergenic 25.0%
! CTTCAAACACATAATAGTAA+TGG - chr3_1:81255072-81255091 None:intergenic 25.0%
!! TACTTTTCTTTCATTGTTGT+CGG - chr3_1:81255183-81255202 None:intergenic 25.0%
! CTACTATTCTAATCTTCATT+TGG - chr3_1:81255323-81255342 None:intergenic 25.0%
! AGTCAACCTGTAAAATATAT+AGG + chr3_1:81255341-81255360 Msa0379850:intron 25.0%
! TTTCCACAATGTTAATTATG+AGG + chr3_1:81255369-81255388 Msa0379850:intron 25.0%
! TTCCACAATGTTAATTATGA+GGG + chr3_1:81255370-81255389 Msa0379850:intron 25.0%
!!! AGAAAGTATCAACTATCAAA+GGG - chr3_1:81255615-81255634 None:intergenic 25.0%
!!! TAGAAAGTATCAACTATCAA+AGG - chr3_1:81255616-81255635 None:intergenic 25.0%
! CGGATTAAAACAAAGATTAA+AGG + chr3_1:81255833-81255852 Msa0379850:CDS 25.0%
! AACAAAGATTAAAGGATATG+AGG + chr3_1:81255841-81255860 Msa0379850:CDS 25.0%
! ATCTTAGTAAGAAAACTCAT+TGG + chr3_1:81256098-81256117 Msa0379850:CDS 25.0%
! AACAAAAAAAATTGCACAGA+AGG + chr3_1:81256325-81256344 Msa0379850:CDS 25.0%
! ACAAAAAAAATTGCACAGAA+GGG + chr3_1:81256326-81256345 Msa0379850:CDS 25.0%
!! TGATACCTTTTTCTGTTAAT+TGG + chr3_1:81256392-81256411 Msa0379850:intron 25.0%
! CCTAGTAAAAAATTCTACAA+AGG - chr3_1:81256624-81256643 None:intergenic 25.0%
!!! CCTTTGTAGAATTTTTTACT+AGG + chr3_1:81256621-81256640 Msa0379850:intron 25.0%
!! GTATAATTTGACAACCATTT+TGG - chr3_1:81256831-81256850 None:intergenic 25.0%
! CCAATGATTGATAAATTACT+AGG - chr3_1:81256886-81256905 None:intergenic 25.0%
! CCTAGTAATTTATCAATCAT+TGG + chr3_1:81256883-81256902 Msa0379850:intron 25.0%
! TAATATCTGCAACAGAAAAA+GGG - chr3_1:81257080-81257099 None:intergenic 25.0%
! TTTCTTCTTCAAATTACTCT+CGG + chr3_1:81257390-81257409 Msa0379850:intron 25.0%
! CTTATTATATAGGCTGATAT+CGG + chr3_1:81257463-81257482 Msa0379850:intron 25.0%
! TTTAAGCTACACAATATTTC+TGG - chr3_1:81257546-81257565 None:intergenic 25.0%
! TAATTTCCATGTGATAAAAC+AGG + chr3_1:81257763-81257782 Msa0379850:intron 25.0%
! TATAAGGTGAATTTGTGAAT+GGG - chr3_1:81257952-81257971 None:intergenic 25.0%
! TTATAAGGTGAATTTGTGAA+TGG - chr3_1:81257953-81257972 None:intergenic 25.0%
!!! TTTTTTTCATCTTGCTTTGA+TGG - chr3_1:81258244-81258263 None:intergenic 25.0%
! TCAACCATTTATATATGCAA+AGG - chr3_1:81258421-81258440 None:intergenic 25.0%
! ATAATATGGGTAATCAGTTA+GGG - chr3_1:81258477-81258496 None:intergenic 25.0%
! CACAATTTATGTGCATAATA+TGG - chr3_1:81258491-81258510 None:intergenic 25.0%
! CATATTATGCACATAAATTG+TGG + chr3_1:81258489-81258508 Msa0379850:three_prime_UTR 25.0%
! ATTCAAAACTGCAAAAAAAC+TGG - chr3_1:81252720-81252739 None:intergenic 25.0%
! AATTCTACAATGACATATTC+AGG + chr3_1:81252878-81252897 Msa0379850:CDS 25.0%
! AACAAAACATTACATCTAGA+AGG - chr3_1:81253301-81253320 None:intergenic 25.0%
!!! ATTTTATTGCATGATGGAAA+AGG - chr3_1:81253612-81253631 None:intergenic 25.0%
! TTTCCATCATGCAATAAAAT+TGG + chr3_1:81253612-81253631 Msa0379850:intron 25.0%
!! AAACCAATTTTATTGCATGA+TGG - chr3_1:81253618-81253637 None:intergenic 25.0%
!!! TGCAATAAAATTGGTTTGTT+TGG + chr3_1:81253621-81253640 Msa0379850:intron 25.0%
! GAAAATTATTCTACTTGCAA+TGG + chr3_1:81253744-81253763 Msa0379850:intron 25.0%
!! TATTTTCTTGAGATTTGTGT+CGG + chr3_1:81253921-81253940 Msa0379850:intron 25.0%
! GCATCAAATGATATGATTTA+TGG - chr3_1:81254102-81254121 None:intergenic 25.0%
! CCTTCATAGATATTGTATTT+AGG - chr3_1:81254176-81254195 None:intergenic 25.0%
! CCTAAATACAATATCTATGA+AGG + chr3_1:81254173-81254192 Msa0379850:intron 25.0%
!!! TTGATAACATATGTTTTCAG+TGG + chr3_1:81254416-81254435 Msa0379850:intron 25.0%
!! GGAATAAAAAAGTATAGACA+CGG + chr3_1:81254882-81254901 Msa0379850:intron 25.0%
!!! AACACATAATAGTAATGGAT+GGG - chr3_1:81255067-81255086 None:intergenic 25.0%
!! AAACACATAATAGTAATGGA+TGG - chr3_1:81255068-81255087 None:intergenic 25.0%
! CTTCAAACACATAATAGTAA+TGG - chr3_1:81255072-81255091 None:intergenic 25.0%
!! TACTTTTCTTTCATTGTTGT+CGG - chr3_1:81255183-81255202 None:intergenic 25.0%
! CTACTATTCTAATCTTCATT+TGG - chr3_1:81255323-81255342 None:intergenic 25.0%
! AGTCAACCTGTAAAATATAT+AGG + chr3_1:81255341-81255360 Msa0379850:intron 25.0%
! TTTCCACAATGTTAATTATG+AGG + chr3_1:81255369-81255388 Msa0379850:intron 25.0%
! TTCCACAATGTTAATTATGA+GGG + chr3_1:81255370-81255389 Msa0379850:intron 25.0%
!!! AGAAAGTATCAACTATCAAA+GGG - chr3_1:81255615-81255634 None:intergenic 25.0%
!!! TAGAAAGTATCAACTATCAA+AGG - chr3_1:81255616-81255635 None:intergenic 25.0%
! CGGATTAAAACAAAGATTAA+AGG + chr3_1:81255833-81255852 Msa0379850:CDS 25.0%
! AACAAAGATTAAAGGATATG+AGG + chr3_1:81255841-81255860 Msa0379850:CDS 25.0%
! ATCTTAGTAAGAAAACTCAT+TGG + chr3_1:81256098-81256117 Msa0379850:CDS 25.0%
! AACAAAAAAAATTGCACAGA+AGG + chr3_1:81256325-81256344 Msa0379850:CDS 25.0%
! ACAAAAAAAATTGCACAGAA+GGG + chr3_1:81256326-81256345 Msa0379850:CDS 25.0%
!! TGATACCTTTTTCTGTTAAT+TGG + chr3_1:81256392-81256411 Msa0379850:intron 25.0%
! CCTAGTAAAAAATTCTACAA+AGG - chr3_1:81256624-81256643 None:intergenic 25.0%
!!! CCTTTGTAGAATTTTTTACT+AGG + chr3_1:81256621-81256640 Msa0379850:intron 25.0%
!! GTATAATTTGACAACCATTT+TGG - chr3_1:81256831-81256850 None:intergenic 25.0%
! CCAATGATTGATAAATTACT+AGG - chr3_1:81256886-81256905 None:intergenic 25.0%
! CCTAGTAATTTATCAATCAT+TGG + chr3_1:81256883-81256902 Msa0379850:intron 25.0%
! TAATATCTGCAACAGAAAAA+GGG - chr3_1:81257080-81257099 None:intergenic 25.0%
! TTTCTTCTTCAAATTACTCT+CGG + chr3_1:81257390-81257409 Msa0379850:intron 25.0%
! CTTATTATATAGGCTGATAT+CGG + chr3_1:81257463-81257482 Msa0379850:intron 25.0%
! TTTAAGCTACACAATATTTC+TGG - chr3_1:81257546-81257565 None:intergenic 25.0%
! TAATTTCCATGTGATAAAAC+AGG + chr3_1:81257763-81257782 Msa0379850:intron 25.0%
! TATAAGGTGAATTTGTGAAT+GGG - chr3_1:81257952-81257971 None:intergenic 25.0%
! TTATAAGGTGAATTTGTGAA+TGG - chr3_1:81257953-81257972 None:intergenic 25.0%
!!! TTTTTTTCATCTTGCTTTGA+TGG - chr3_1:81258244-81258263 None:intergenic 25.0%
! TCAACCATTTATATATGCAA+AGG - chr3_1:81258421-81258440 None:intergenic 25.0%
! ATAATATGGGTAATCAGTTA+GGG - chr3_1:81258477-81258496 None:intergenic 25.0%
! CACAATTTATGTGCATAATA+TGG - chr3_1:81258491-81258510 None:intergenic 25.0%
! CATATTATGCACATAAATTG+TGG + chr3_1:81258489-81258508 Msa0379850:three_prime_UTR 25.0%
! TTTTCTTTCTCCAATATCCT+CGG + chr3_1:81252631-81252650 Msa0379850:five_prime_UTR 30.0%
AGGCAATACATTAGTAATAC+TGG + chr3_1:81252926-81252945 Msa0379850:CDS 30.0%
GACAAAACATAATCGATTAC+CGG - chr3_1:81253069-81253088 None:intergenic 30.0%
CTTTGTGAATTGACAGAATA+TGG + chr3_1:81253225-81253244 Msa0379850:intron 30.0%
!! GATGTAATGTTTTGTTGTGT+CGG + chr3_1:81253305-81253324 Msa0379850:CDS 30.0%
TAAATTGGACAATTATGGAC+TGG + chr3_1:81253471-81253490 Msa0379850:intron 30.0%
GGTTATGACTTATGATTGAA+AGG + chr3_1:81253765-81253784 Msa0379850:intron 30.0%
AGATAGCTAATTGTGTACAA+TGG - chr3_1:81253834-81253853 None:intergenic 30.0%
! ATTTTCTTGAGATTTGTGTC+GGG + chr3_1:81253922-81253941 Msa0379850:intron 30.0%
CTAAAAGGAAAACCAAAGTT+TGG - chr3_1:81253966-81253985 None:intergenic 30.0%
!!! CAAACTTTGGTTTTCCTTTT+AGG + chr3_1:81253964-81253983 Msa0379850:intron 30.0%
! TTTAATTTAGAGTTTCGGTG+CGG - chr3_1:81254038-81254057 None:intergenic 30.0%
GGGATTAATTGAAGCATAAT+TGG - chr3_1:81254249-81254268 None:intergenic 30.0%
!! ATAATTGGCTTTGCTATCTT+TGG + chr3_1:81254279-81254298 Msa0379850:CDS 30.0%
ACAAGCACAAAATTTCTGTA+TGG + chr3_1:81255148-81255167 Msa0379850:CDS 30.0%
ACATGGCAAAGATATGTAAA+AGG - chr3_1:81255210-81255229 None:intergenic 30.0%
!! AACTCATCTAAAGCTTTAAG+TGG - chr3_1:81255292-81255311 None:intergenic 30.0%
TCATTGTTTATGGAGTTGTT+GGG + chr3_1:81255508-81255527 Msa0379850:CDS 30.0%
ATTAAAGGATATGAGGTTTC+TGG + chr3_1:81255848-81255867 Msa0379850:CDS 30.0%
! TCATATTTTCTGTAGCATGT+AGG + chr3_1:81255989-81256008 Msa0379850:intron 30.0%
! AATTTACTGGGATTTTCTGA+TGG + chr3_1:81256203-81256222 Msa0379850:intron 30.0%
! TTGTTCTACTAGAGGATTTT+TGG - chr3_1:81256310-81256329 None:intergenic 30.0%
AAGGGAAGAAAATAAGATAC+TGG - chr3_1:81256448-81256467 None:intergenic 30.0%
TTAGAAACCTGATTCAACTA+CGG - chr3_1:81256688-81256707 None:intergenic 30.0%
ATAACTCTGACTAAAGTCAA+AGG + chr3_1:81256707-81256726 Msa0379850:intron 30.0%
! AAAAGCTTTTGTAAGCATTC+TGG - chr3_1:81256784-81256803 None:intergenic 30.0%
TCATCTGTTTCATTCCAAAA+TGG + chr3_1:81256814-81256833 Msa0379850:intron 30.0%
ATCAATCATTGGAATCTGAT+TGG + chr3_1:81256894-81256913 Msa0379850:intron 30.0%
AGTAGAGCAGAAAGATAATA+GGG - chr3_1:81256993-81257012 None:intergenic 30.0%
AAGTAGAGCAGAAAGATAAT+AGG - chr3_1:81256994-81257013 None:intergenic 30.0%
CTAATATCTGCAACAGAAAA+AGG - chr3_1:81257081-81257100 None:intergenic 30.0%
!!! CTTGTTGCTTTTGTACATTT+TGG + chr3_1:81257498-81257517 Msa0379850:intron 30.0%
! TTTTGTTCGGTTAACTGTTA+AGG + chr3_1:81257717-81257736 Msa0379850:intron 30.0%
TTTGTTCGGTTAACTGTTAA+GGG + chr3_1:81257718-81257737 Msa0379850:intron 30.0%
!! ATAGTAGTTGATTGAGTTGA+AGG - chr3_1:81257983-81258002 None:intergenic 30.0%
!! ATCTTTGAAACCAGTTATCA+AGG - chr3_1:81258038-81258057 None:intergenic 30.0%
! ATAACTGGTTTCAAAGATGA+AGG + chr3_1:81258040-81258059 Msa0379850:CDS 30.0%
!! TGTTGACTTTAACTTATCCT+GGG - chr3_1:81258110-81258129 None:intergenic 30.0%
!! ATGTTGACTTTAACTTATCC+TGG - chr3_1:81258111-81258130 None:intergenic 30.0%
AAGATTCAGAGGCTAAATTT+CGG - chr3_1:81258147-81258166 None:intergenic 30.0%
GCAACCTTTGCATATATAAA+TGG + chr3_1:81258414-81258433 Msa0379850:three_prime_UTR 30.0%
ACTAGAGTTAGAACTCAAAT+TGG + chr3_1:81258448-81258467 Msa0379850:three_prime_UTR 30.0%
CATAATATGGGTAATCAGTT+AGG - chr3_1:81258478-81258497 None:intergenic 30.0%
GTTTAATGCGTGTAATAAAC+AGG - chr3_1:81258562-81258581 None:intergenic 30.0%
! TTTTCTTTCTCCAATATCCT+CGG + chr3_1:81252631-81252650 Msa0379850:five_prime_UTR 30.0%
AGGCAATACATTAGTAATAC+TGG + chr3_1:81252926-81252945 Msa0379850:CDS 30.0%
GACAAAACATAATCGATTAC+CGG - chr3_1:81253069-81253088 None:intergenic 30.0%
CTTTGTGAATTGACAGAATA+TGG + chr3_1:81253225-81253244 Msa0379850:intron 30.0%
!! GATGTAATGTTTTGTTGTGT+CGG + chr3_1:81253305-81253324 Msa0379850:CDS 30.0%
TAAATTGGACAATTATGGAC+TGG + chr3_1:81253471-81253490 Msa0379850:intron 30.0%
GGTTATGACTTATGATTGAA+AGG + chr3_1:81253765-81253784 Msa0379850:intron 30.0%
AGATAGCTAATTGTGTACAA+TGG - chr3_1:81253834-81253853 None:intergenic 30.0%
! ATTTTCTTGAGATTTGTGTC+GGG + chr3_1:81253922-81253941 Msa0379850:intron 30.0%
CTAAAAGGAAAACCAAAGTT+TGG - chr3_1:81253966-81253985 None:intergenic 30.0%
!!! CAAACTTTGGTTTTCCTTTT+AGG + chr3_1:81253964-81253983 Msa0379850:intron 30.0%
! TTTAATTTAGAGTTTCGGTG+CGG - chr3_1:81254038-81254057 None:intergenic 30.0%
GGGATTAATTGAAGCATAAT+TGG - chr3_1:81254249-81254268 None:intergenic 30.0%
!! ATAATTGGCTTTGCTATCTT+TGG + chr3_1:81254279-81254298 Msa0379850:CDS 30.0%
ACAAGCACAAAATTTCTGTA+TGG + chr3_1:81255148-81255167 Msa0379850:CDS 30.0%
ACATGGCAAAGATATGTAAA+AGG - chr3_1:81255210-81255229 None:intergenic 30.0%
!! AACTCATCTAAAGCTTTAAG+TGG - chr3_1:81255292-81255311 None:intergenic 30.0%
TCATTGTTTATGGAGTTGTT+GGG + chr3_1:81255508-81255527 Msa0379850:CDS 30.0%
ATTAAAGGATATGAGGTTTC+TGG + chr3_1:81255848-81255867 Msa0379850:CDS 30.0%
! TCATATTTTCTGTAGCATGT+AGG + chr3_1:81255989-81256008 Msa0379850:intron 30.0%
! AATTTACTGGGATTTTCTGA+TGG + chr3_1:81256203-81256222 Msa0379850:intron 30.0%
! TTGTTCTACTAGAGGATTTT+TGG - chr3_1:81256310-81256329 None:intergenic 30.0%
AAGGGAAGAAAATAAGATAC+TGG - chr3_1:81256448-81256467 None:intergenic 30.0%
TTAGAAACCTGATTCAACTA+CGG - chr3_1:81256688-81256707 None:intergenic 30.0%
ATAACTCTGACTAAAGTCAA+AGG + chr3_1:81256707-81256726 Msa0379850:intron 30.0%
! AAAAGCTTTTGTAAGCATTC+TGG - chr3_1:81256784-81256803 None:intergenic 30.0%
TCATCTGTTTCATTCCAAAA+TGG + chr3_1:81256814-81256833 Msa0379850:intron 30.0%
ATCAATCATTGGAATCTGAT+TGG + chr3_1:81256894-81256913 Msa0379850:intron 30.0%
AGTAGAGCAGAAAGATAATA+GGG - chr3_1:81256993-81257012 None:intergenic 30.0%
AAGTAGAGCAGAAAGATAAT+AGG - chr3_1:81256994-81257013 None:intergenic 30.0%
CTAATATCTGCAACAGAAAA+AGG - chr3_1:81257081-81257100 None:intergenic 30.0%
!!! CTTGTTGCTTTTGTACATTT+TGG + chr3_1:81257498-81257517 Msa0379850:intron 30.0%
! TTTTGTTCGGTTAACTGTTA+AGG + chr3_1:81257717-81257736 Msa0379850:intron 30.0%
TTTGTTCGGTTAACTGTTAA+GGG + chr3_1:81257718-81257737 Msa0379850:intron 30.0%
!! ATAGTAGTTGATTGAGTTGA+AGG - chr3_1:81257983-81258002 None:intergenic 30.0%
!! ATCTTTGAAACCAGTTATCA+AGG - chr3_1:81258038-81258057 None:intergenic 30.0%
! ATAACTGGTTTCAAAGATGA+AGG + chr3_1:81258040-81258059 Msa0379850:CDS 30.0%
!! TGTTGACTTTAACTTATCCT+GGG - chr3_1:81258110-81258129 None:intergenic 30.0%
!! ATGTTGACTTTAACTTATCC+TGG - chr3_1:81258111-81258130 None:intergenic 30.0%
AAGATTCAGAGGCTAAATTT+CGG - chr3_1:81258147-81258166 None:intergenic 30.0%
GCAACCTTTGCATATATAAA+TGG + chr3_1:81258414-81258433 Msa0379850:three_prime_UTR 30.0%
ACTAGAGTTAGAACTCAAAT+TGG + chr3_1:81258448-81258467 Msa0379850:three_prime_UTR 30.0%
CATAATATGGGTAATCAGTT+AGG - chr3_1:81258478-81258497 None:intergenic 30.0%
GTTTAATGCGTGTAATAAAC+AGG - chr3_1:81258562-81258581 None:intergenic 30.0%
! GTTTTGCGCTGTTTGTAAAT+TGG + chr3_1:81252570-81252589 Msa0379850:five_prime_UTR 35.0%
! GATTCTTTTTCCGAGGATAT+TGG - chr3_1:81252644-81252663 None:intergenic 35.0%
! GATGTTTGATTCTTTTTCCG+AGG - chr3_1:81252651-81252670 None:intergenic 35.0%
AAACATGCCTTAGATACTGT+TGG - chr3_1:81252686-81252705 None:intergenic 35.0%
! ATCTAAGGCATGTTTAAGCA+AGG + chr3_1:81252691-81252710 Msa0379850:intron 35.0%
TTCGATTGTCTCATGACTTT+AGG + chr3_1:81252906-81252925 Msa0379850:CDS 35.0%
TTTGTCATGTATGTTGTGTC+TGG + chr3_1:81252960-81252979 Msa0379850:intron 35.0%
TGTTGACAGAAACCTAATTC+CGG + chr3_1:81253047-81253066 Msa0379850:intron 35.0%
CATAATCGATTACCGGAATT+AGG - chr3_1:81253062-81253081 None:intergenic 35.0%
TTCTTGTGCAGTGATTGTAT+TGG + chr3_1:81253145-81253164 Msa0379850:intron 35.0%
! ACATTACATCTAGAAGGTAC+AGG - chr3_1:81253295-81253314 None:intergenic 35.0%
ACAGAAGTTTCGTCATTCAT+TGG + chr3_1:81253425-81253444 Msa0379850:intron 35.0%
CTGGACTCGTGTAATTATTA+TGG + chr3_1:81253490-81253509 Msa0379850:intron 35.0%
! GCACTGTAGTTTTTACATGT+AGG - chr3_1:81253709-81253728 None:intergenic 35.0%
GCTAATTGTGTACAATGGTT+GGG - chr3_1:81253829-81253848 None:intergenic 35.0%
AGCTAATTGTGTACAATGGT+TGG - chr3_1:81253830-81253849 None:intergenic 35.0%
TTACCATACGAAAGGATGAT+GGG - chr3_1:81253893-81253912 None:intergenic 35.0%
!!! TTTGGTTTTCCTTTTAGGAG+AGG + chr3_1:81253969-81253988 Msa0379850:intron 35.0%
AGGAATTAGTAGGCTGAAAA+AGG - chr3_1:81254156-81254175 None:intergenic 35.0%
AGGTCATGTAATGCTATATC+AGG + chr3_1:81254219-81254238 Msa0379850:intron 35.0%
AAAGCCAATTATACCAAGAG+CGG - chr3_1:81254271-81254290 None:intergenic 35.0%
! CAATTGCTTTAGACAACACA+TGG - chr3_1:81254370-81254389 None:intergenic 35.0%
TTCAGTGGAACGATAAAAGT+TGG + chr3_1:81254431-81254450 Msa0379850:intron 35.0%
AGGACTTGACAAACTTTCAA+CGG - chr3_1:81254564-81254583 None:intergenic 35.0%
AATCTACCTTGAAGAACAGT+AGG - chr3_1:81254717-81254736 None:intergenic 35.0%
ATTATGTCCACAGTTGTTGT+CGG + chr3_1:81254751-81254770 Msa0379850:intron 35.0%
GGCGCAAGATATTAATAGTA+TGG - chr3_1:81254785-81254804 None:intergenic 35.0%
ATGTTACACACACACATGAA+TGG - chr3_1:81255235-81255254 None:intergenic 35.0%
CACCCTCATAATTAACATTG+TGG - chr3_1:81255375-81255394 None:intergenic 35.0%
!! CAGATGAGCATTGATCTTAT+CGG + chr3_1:81255448-81255467 Msa0379850:intron 35.0%
!! AGATGAGCATTGATCTTATC+GGG + chr3_1:81255449-81255468 Msa0379850:intron 35.0%
AAGCTGTATATACTGCAGTA+TGG + chr3_1:81255473-81255492 Msa0379850:CDS 35.0%
AGCTGTATATACTGCAGTAT+GGG + chr3_1:81255474-81255493 Msa0379850:CDS 35.0%
CAACTCCATAAACAATGACA+CGG - chr3_1:81255506-81255525 None:intergenic 35.0%
GTCATTGTTTATGGAGTTGT+TGG + chr3_1:81255507-81255526 Msa0379850:CDS 35.0%
CATGAATCATCACACTTGAA+AGG - chr3_1:81255787-81255806 None:intergenic 35.0%
! ATTTTCTGTAGCATGTAGGA+TGG + chr3_1:81255993-81256012 Msa0379850:intron 35.0%
TTCACACTCAACTTGTGATT+AGG - chr3_1:81256067-81256086 None:intergenic 35.0%
TCCAGAAAATCAAGCTCTTA+TGG + chr3_1:81256368-81256387 Msa0379850:CDS 35.0%
! ACCATAAGAGCTTGATTTTC+TGG - chr3_1:81256372-81256391 None:intergenic 35.0%
GAACCAAGACTGAAGATAAA+GGG - chr3_1:81256466-81256485 None:intergenic 35.0%
AGAACCAAGACTGAAGATAA+AGG - chr3_1:81256467-81256486 None:intergenic 35.0%
!! GGTTCTGAAAGGAAGTTATA+AGG + chr3_1:81256481-81256500 Msa0379850:intron 35.0%
! AAAGTACCAATTAGGCTTGT+AGG + chr3_1:81256540-81256559 Msa0379850:intron 35.0%
CTAGAAATGTAAACAAGCAG+AGG - chr3_1:81256595-81256614 None:intergenic 35.0%
AGCAAAACCATAGGGTTAAA+TGG - chr3_1:81256647-81256666 None:intergenic 35.0%
TGAATAGCAGCAAAACCATA+GGG - chr3_1:81256655-81256674 None:intergenic 35.0%
AGGCAATACATAAATGACAC+AGG - chr3_1:81256866-81256885 None:intergenic 35.0%
AATCTAGTCTCACCTTAACA+CGG - chr3_1:81257144-81257163 None:intergenic 35.0%
AGCAACTCAATTGTATTAGC+TGG + chr3_1:81257275-81257294 Msa0379850:intron 35.0%
TTTCCATGTGATAAAACAGG+AGG + chr3_1:81257766-81257785 Msa0379850:intron 35.0%
TCTAAGAAGATCCAAGAGAA+TGG - chr3_1:81257792-81257811 None:intergenic 35.0%
TGTACATCTTCTGAATTGTG+CGG - chr3_1:81257853-81257872 None:intergenic 35.0%
AATTTGTGAATGGGAAAGAG+TGG - chr3_1:81257943-81257962 None:intergenic 35.0%
!! GTTGAAGGCTTAGCTTTATA+AGG - chr3_1:81257968-81257987 None:intergenic 35.0%
TATCAAGGTTTCACGAATCT+TGG - chr3_1:81258023-81258042 None:intergenic 35.0%
! ATTCGTGAAACCTTGATAAC+TGG + chr3_1:81258025-81258044 Msa0379850:CDS 35.0%
AGATTCAGAGGCTAAATTTC+GGG - chr3_1:81258146-81258165 None:intergenic 35.0%
TGGATTATCAGAAGATTCAG+AGG - chr3_1:81258158-81258177 None:intergenic 35.0%
TTCTGATAATCCAGTTCAGA+AGG + chr3_1:81258165-81258184 Msa0379850:CDS 35.0%
TTATCAAGCTTATGTCAAGC+TGG + chr3_1:81258359-81258378 Msa0379850:three_prime_UTR 35.0%
TATCAAGCTTATGTCAAGCT+GGG + chr3_1:81258360-81258379 Msa0379850:three_prime_UTR 35.0%
! GTTTTGCGCTGTTTGTAAAT+TGG + chr3_1:81252570-81252589 Msa0379850:five_prime_UTR 35.0%
! GATTCTTTTTCCGAGGATAT+TGG - chr3_1:81252644-81252663 None:intergenic 35.0%
! GATGTTTGATTCTTTTTCCG+AGG - chr3_1:81252651-81252670 None:intergenic 35.0%
AAACATGCCTTAGATACTGT+TGG - chr3_1:81252686-81252705 None:intergenic 35.0%
! ATCTAAGGCATGTTTAAGCA+AGG + chr3_1:81252691-81252710 Msa0379850:intron 35.0%
TTCGATTGTCTCATGACTTT+AGG + chr3_1:81252906-81252925 Msa0379850:CDS 35.0%
TTTGTCATGTATGTTGTGTC+TGG + chr3_1:81252960-81252979 Msa0379850:intron 35.0%
TGTTGACAGAAACCTAATTC+CGG + chr3_1:81253047-81253066 Msa0379850:intron 35.0%
CATAATCGATTACCGGAATT+AGG - chr3_1:81253062-81253081 None:intergenic 35.0%
TTCTTGTGCAGTGATTGTAT+TGG + chr3_1:81253145-81253164 Msa0379850:intron 35.0%
! ACATTACATCTAGAAGGTAC+AGG - chr3_1:81253295-81253314 None:intergenic 35.0%
ACAGAAGTTTCGTCATTCAT+TGG + chr3_1:81253425-81253444 Msa0379850:intron 35.0%
CTGGACTCGTGTAATTATTA+TGG + chr3_1:81253490-81253509 Msa0379850:intron 35.0%
! GCACTGTAGTTTTTACATGT+AGG - chr3_1:81253709-81253728 None:intergenic 35.0%
GCTAATTGTGTACAATGGTT+GGG - chr3_1:81253829-81253848 None:intergenic 35.0%
AGCTAATTGTGTACAATGGT+TGG - chr3_1:81253830-81253849 None:intergenic 35.0%
TTACCATACGAAAGGATGAT+GGG - chr3_1:81253893-81253912 None:intergenic 35.0%
!!! TTTGGTTTTCCTTTTAGGAG+AGG + chr3_1:81253969-81253988 Msa0379850:intron 35.0%
AGGAATTAGTAGGCTGAAAA+AGG - chr3_1:81254156-81254175 None:intergenic 35.0%
AGGTCATGTAATGCTATATC+AGG + chr3_1:81254219-81254238 Msa0379850:intron 35.0%
AAAGCCAATTATACCAAGAG+CGG - chr3_1:81254271-81254290 None:intergenic 35.0%
! CAATTGCTTTAGACAACACA+TGG - chr3_1:81254370-81254389 None:intergenic 35.0%
TTCAGTGGAACGATAAAAGT+TGG + chr3_1:81254431-81254450 Msa0379850:intron 35.0%
AGGACTTGACAAACTTTCAA+CGG - chr3_1:81254564-81254583 None:intergenic 35.0%
AATCTACCTTGAAGAACAGT+AGG - chr3_1:81254717-81254736 None:intergenic 35.0%
ATTATGTCCACAGTTGTTGT+CGG + chr3_1:81254751-81254770 Msa0379850:intron 35.0%
GGCGCAAGATATTAATAGTA+TGG - chr3_1:81254785-81254804 None:intergenic 35.0%
ATGTTACACACACACATGAA+TGG - chr3_1:81255235-81255254 None:intergenic 35.0%
CACCCTCATAATTAACATTG+TGG - chr3_1:81255375-81255394 None:intergenic 35.0%
!! CAGATGAGCATTGATCTTAT+CGG + chr3_1:81255448-81255467 Msa0379850:intron 35.0%
!! AGATGAGCATTGATCTTATC+GGG + chr3_1:81255449-81255468 Msa0379850:intron 35.0%
AAGCTGTATATACTGCAGTA+TGG + chr3_1:81255473-81255492 Msa0379850:CDS 35.0%
AGCTGTATATACTGCAGTAT+GGG + chr3_1:81255474-81255493 Msa0379850:CDS 35.0%
CAACTCCATAAACAATGACA+CGG - chr3_1:81255506-81255525 None:intergenic 35.0%
GTCATTGTTTATGGAGTTGT+TGG + chr3_1:81255507-81255526 Msa0379850:CDS 35.0%
CATGAATCATCACACTTGAA+AGG - chr3_1:81255787-81255806 None:intergenic 35.0%
! ATTTTCTGTAGCATGTAGGA+TGG + chr3_1:81255993-81256012 Msa0379850:intron 35.0%
TTCACACTCAACTTGTGATT+AGG - chr3_1:81256067-81256086 None:intergenic 35.0%
TCCAGAAAATCAAGCTCTTA+TGG + chr3_1:81256368-81256387 Msa0379850:CDS 35.0%
! ACCATAAGAGCTTGATTTTC+TGG - chr3_1:81256372-81256391 None:intergenic 35.0%
GAACCAAGACTGAAGATAAA+GGG - chr3_1:81256466-81256485 None:intergenic 35.0%
AGAACCAAGACTGAAGATAA+AGG - chr3_1:81256467-81256486 None:intergenic 35.0%
!! GGTTCTGAAAGGAAGTTATA+AGG + chr3_1:81256481-81256500 Msa0379850:intron 35.0%
! AAAGTACCAATTAGGCTTGT+AGG + chr3_1:81256540-81256559 Msa0379850:intron 35.0%
CTAGAAATGTAAACAAGCAG+AGG - chr3_1:81256595-81256614 None:intergenic 35.0%
AGCAAAACCATAGGGTTAAA+TGG - chr3_1:81256647-81256666 None:intergenic 35.0%
TGAATAGCAGCAAAACCATA+GGG - chr3_1:81256655-81256674 None:intergenic 35.0%
AGGCAATACATAAATGACAC+AGG - chr3_1:81256866-81256885 None:intergenic 35.0%
AATCTAGTCTCACCTTAACA+CGG - chr3_1:81257144-81257163 None:intergenic 35.0%
AGCAACTCAATTGTATTAGC+TGG + chr3_1:81257275-81257294 Msa0379850:intron 35.0%
TTTCCATGTGATAAAACAGG+AGG + chr3_1:81257766-81257785 Msa0379850:intron 35.0%
TCTAAGAAGATCCAAGAGAA+TGG - chr3_1:81257792-81257811 None:intergenic 35.0%
TGTACATCTTCTGAATTGTG+CGG - chr3_1:81257853-81257872 None:intergenic 35.0%
AATTTGTGAATGGGAAAGAG+TGG - chr3_1:81257943-81257962 None:intergenic 35.0%
!! GTTGAAGGCTTAGCTTTATA+AGG - chr3_1:81257968-81257987 None:intergenic 35.0%
TATCAAGGTTTCACGAATCT+TGG - chr3_1:81258023-81258042 None:intergenic 35.0%
! ATTCGTGAAACCTTGATAAC+TGG + chr3_1:81258025-81258044 Msa0379850:CDS 35.0%
AGATTCAGAGGCTAAATTTC+GGG - chr3_1:81258146-81258165 None:intergenic 35.0%
TGGATTATCAGAAGATTCAG+AGG - chr3_1:81258158-81258177 None:intergenic 35.0%
TTCTGATAATCCAGTTCAGA+AGG + chr3_1:81258165-81258184 Msa0379850:CDS 35.0%
TTATCAAGCTTATGTCAAGC+TGG + chr3_1:81258359-81258378 Msa0379850:three_prime_UTR 35.0%
TATCAAGCTTATGTCAAGCT+GGG + chr3_1:81258360-81258379 Msa0379850:three_prime_UTR 35.0%
TCTCTCTCCAACAGTATCTA+AGG + chr3_1:81252676-81252695 Msa0379850:five_prime_UTR 40.0%
! TAGAAGGTACAGGCTTATGT+TGG - chr3_1:81253285-81253304 None:intergenic 40.0%
AAACTTCTGTCAGCTACGAA+AGG - chr3_1:81253415-81253434 None:intergenic 40.0%
TGACAGAGTTATCAGTGCAT+AGG - chr3_1:81253675-81253694 None:intergenic 40.0%
AAAGGCTTTCTTTGACATGC+TGG + chr3_1:81253783-81253802 Msa0379850:intron 40.0%
AAGGCTTTCTTTGACATGCT+GGG + chr3_1:81253784-81253803 Msa0379850:intron 40.0%
!! GATGATGGGAAATAACCATG+CGG - chr3_1:81253879-81253898 None:intergenic 40.0%
TTTCCCATCATCCTTTCGTA+TGG + chr3_1:81253887-81253906 Msa0379850:intron 40.0%
GTTACCATACGAAAGGATGA+TGG - chr3_1:81253894-81253913 None:intergenic 40.0%
TGAGAGAGTTACCATACGAA+AGG - chr3_1:81253901-81253920 None:intergenic 40.0%
TGGAGGAGTGAGTAGTTATT+GGG + chr3_1:81254001-81254020 Msa0379850:intron 40.0%
AAGCCAATTATACCAAGAGC+GGG - chr3_1:81254270-81254289 None:intergenic 40.0%
! ATTTTCAACCTTTGCTGCTG+TGG + chr3_1:81254488-81254507 Msa0379850:CDS 40.0%
AGGTATCTTTCTGGATCAGA+AGG + chr3_1:81254532-81254551 Msa0379850:intron 40.0%
ACGTCAAGGTGCATACAAAT+AGG - chr3_1:81254584-81254603 None:intergenic 40.0%
ACCTTGACGTAAACTGTTTC+AGG + chr3_1:81254594-81254613 Msa0379850:intron 40.0%
CCTTGACGTAAACTGTTTCA+GGG + chr3_1:81254595-81254614 Msa0379850:intron 40.0%
CTTGACGTAAACTGTTTCAG+GGG + chr3_1:81254596-81254615 Msa0379850:intron 40.0%
!! GTTTTTGATTGCACGACTAG+TGG - chr3_1:81254629-81254648 None:intergenic 40.0%
!!! CCAGTCCGATTTTAAAGCAA+CGG + chr3_1:81254648-81254667 Msa0379850:CDS 40.0%
!! AGCAGCCGTTGCTTTAAAAT+CGG - chr3_1:81254656-81254675 None:intergenic 40.0%
ACAGTAGGCAAATGTAAGCA+CGG - chr3_1:81254702-81254721 None:intergenic 40.0%
CATTTGCCTACTGTTCTTCA+AGG + chr3_1:81254708-81254727 Msa0379850:CDS 40.0%
CACACACATGAATGGAAACA+TGG - chr3_1:81255227-81255246 None:intergenic 40.0%
GAGCTTTGCATTTACATTCC+AGG - chr3_1:81255400-81255419 None:intergenic 40.0%
ACAGTATTGCTTTCACTTGC+AGG + chr3_1:81255571-81255590 Msa0379850:CDS 40.0%
TCCTTAAGAGCAACTCTTCA+CGG + chr3_1:81255706-81255725 Msa0379850:intron 40.0%
GTGTGATGATTCATGCAACT+CGG + chr3_1:81255792-81255811 Msa0379850:CDS 40.0%
ATCCGCTCATTCACAACAAA+TGG - chr3_1:81255818-81255837 None:intergenic 40.0%
AAAATGGAAACCACTCACGT+TGG - chr3_1:81255934-81255953 None:intergenic 40.0%
AGTTGAGTGTGAATGTTGTG+AGG + chr3_1:81256074-81256093 Msa0379850:CDS 40.0%
AAGATTGATGTGAGTGCTCT+TGG + chr3_1:81256163-81256182 Msa0379850:CDS 40.0%
TGTGAGTGCTCTTGGTTTAA+TGG + chr3_1:81256171-81256190 Msa0379850:CDS 40.0%
GCTATCGCATCTTAAAACTG+AGG + chr3_1:81256225-81256244 Msa0379850:intron 40.0%
! ATTGCACAGAAGGGTTTTTC+TGG + chr3_1:81256335-81256354 Msa0379850:CDS 40.0%
CTTCCCTTTATCTTCAGTCT+TGG + chr3_1:81256460-81256479 Msa0379850:intron 40.0%
!! TCTTCAGTCTTGGTTCTGAA+AGG + chr3_1:81256470-81256489 Msa0379850:intron 40.0%
ATGCTATGAGATGCATCTCA+AGG - chr3_1:81256511-81256530 None:intergenic 40.0%
TACTAGGCCATTTAACCCTA+TGG + chr3_1:81256637-81256656 Msa0379850:intron 40.0%
GTGAATAGCAGCAAAACCAT+AGG - chr3_1:81256656-81256675 None:intergenic 40.0%
!! TGAAGAGTATCTCCGTGTTA+AGG + chr3_1:81257129-81257148 Msa0379850:CDS 40.0%
CTAGATTGACGATAGCAACT+TGG + chr3_1:81257157-81257176 Msa0379850:intron 40.0%
ATGTACAAAAGCAACAAGCC+TGG - chr3_1:81257496-81257515 None:intergenic 40.0%
CTTAGAGTCATCAGTCATCA+TGG + chr3_1:81257806-81257825 Msa0379850:CDS 40.0%
ATCTTCTGAATTGTGCGGAT+GGG - chr3_1:81257848-81257867 None:intergenic 40.0%
GTGAAAAAATTGCCGCAACA+TGG + chr3_1:81258062-81258081 Msa0379850:CDS 40.0%
! GGGTGATGTTTCTGATTTAG+AGG - chr3_1:81258191-81258210 None:intergenic 40.0%
!!! ACACAGCTGTCTTTTTTAGC+TGG + chr3_1:81258267-81258286 Msa0379850:exon 40.0%
!!! CACAGCTGTCTTTTTTAGCT+GGG + chr3_1:81258268-81258287 Msa0379850:three_prime_UTR 40.0%
TAATACTAGACTGCCCTCAA+TGG - chr3_1:81258342-81258361 None:intergenic 40.0%
TCTCTCTCCAACAGTATCTA+AGG + chr3_1:81252676-81252695 Msa0379850:five_prime_UTR 40.0%
! TAGAAGGTACAGGCTTATGT+TGG - chr3_1:81253285-81253304 None:intergenic 40.0%
AAACTTCTGTCAGCTACGAA+AGG - chr3_1:81253415-81253434 None:intergenic 40.0%
TGACAGAGTTATCAGTGCAT+AGG - chr3_1:81253675-81253694 None:intergenic 40.0%
AAAGGCTTTCTTTGACATGC+TGG + chr3_1:81253783-81253802 Msa0379850:intron 40.0%
AAGGCTTTCTTTGACATGCT+GGG + chr3_1:81253784-81253803 Msa0379850:intron 40.0%
!! GATGATGGGAAATAACCATG+CGG - chr3_1:81253879-81253898 None:intergenic 40.0%
TTTCCCATCATCCTTTCGTA+TGG + chr3_1:81253887-81253906 Msa0379850:intron 40.0%
GTTACCATACGAAAGGATGA+TGG - chr3_1:81253894-81253913 None:intergenic 40.0%
TGAGAGAGTTACCATACGAA+AGG - chr3_1:81253901-81253920 None:intergenic 40.0%
TGGAGGAGTGAGTAGTTATT+GGG + chr3_1:81254001-81254020 Msa0379850:intron 40.0%
AAGCCAATTATACCAAGAGC+GGG - chr3_1:81254270-81254289 None:intergenic 40.0%
! ATTTTCAACCTTTGCTGCTG+TGG + chr3_1:81254488-81254507 Msa0379850:CDS 40.0%
AGGTATCTTTCTGGATCAGA+AGG + chr3_1:81254532-81254551 Msa0379850:intron 40.0%
ACGTCAAGGTGCATACAAAT+AGG - chr3_1:81254584-81254603 None:intergenic 40.0%
ACCTTGACGTAAACTGTTTC+AGG + chr3_1:81254594-81254613 Msa0379850:intron 40.0%
CCTTGACGTAAACTGTTTCA+GGG + chr3_1:81254595-81254614 Msa0379850:intron 40.0%
CTTGACGTAAACTGTTTCAG+GGG + chr3_1:81254596-81254615 Msa0379850:intron 40.0%
!! GTTTTTGATTGCACGACTAG+TGG - chr3_1:81254629-81254648 None:intergenic 40.0%
!!! CCAGTCCGATTTTAAAGCAA+CGG + chr3_1:81254648-81254667 Msa0379850:CDS 40.0%
!! AGCAGCCGTTGCTTTAAAAT+CGG - chr3_1:81254656-81254675 None:intergenic 40.0%
ACAGTAGGCAAATGTAAGCA+CGG - chr3_1:81254702-81254721 None:intergenic 40.0%
CATTTGCCTACTGTTCTTCA+AGG + chr3_1:81254708-81254727 Msa0379850:CDS 40.0%
CACACACATGAATGGAAACA+TGG - chr3_1:81255227-81255246 None:intergenic 40.0%
GAGCTTTGCATTTACATTCC+AGG - chr3_1:81255400-81255419 None:intergenic 40.0%
ACAGTATTGCTTTCACTTGC+AGG + chr3_1:81255571-81255590 Msa0379850:CDS 40.0%
TCCTTAAGAGCAACTCTTCA+CGG + chr3_1:81255706-81255725 Msa0379850:intron 40.0%
GTGTGATGATTCATGCAACT+CGG + chr3_1:81255792-81255811 Msa0379850:CDS 40.0%
ATCCGCTCATTCACAACAAA+TGG - chr3_1:81255818-81255837 None:intergenic 40.0%
AAAATGGAAACCACTCACGT+TGG - chr3_1:81255934-81255953 None:intergenic 40.0%
AGTTGAGTGTGAATGTTGTG+AGG + chr3_1:81256074-81256093 Msa0379850:CDS 40.0%
AAGATTGATGTGAGTGCTCT+TGG + chr3_1:81256163-81256182 Msa0379850:CDS 40.0%
TGTGAGTGCTCTTGGTTTAA+TGG + chr3_1:81256171-81256190 Msa0379850:CDS 40.0%
GCTATCGCATCTTAAAACTG+AGG + chr3_1:81256225-81256244 Msa0379850:intron 40.0%
! ATTGCACAGAAGGGTTTTTC+TGG + chr3_1:81256335-81256354 Msa0379850:CDS 40.0%
CTTCCCTTTATCTTCAGTCT+TGG + chr3_1:81256460-81256479 Msa0379850:intron 40.0%
!! TCTTCAGTCTTGGTTCTGAA+AGG + chr3_1:81256470-81256489 Msa0379850:intron 40.0%
ATGCTATGAGATGCATCTCA+AGG - chr3_1:81256511-81256530 None:intergenic 40.0%
TACTAGGCCATTTAACCCTA+TGG + chr3_1:81256637-81256656 Msa0379850:intron 40.0%
GTGAATAGCAGCAAAACCAT+AGG - chr3_1:81256656-81256675 None:intergenic 40.0%
!! TGAAGAGTATCTCCGTGTTA+AGG + chr3_1:81257129-81257148 Msa0379850:CDS 40.0%
CTAGATTGACGATAGCAACT+TGG + chr3_1:81257157-81257176 Msa0379850:intron 40.0%
ATGTACAAAAGCAACAAGCC+TGG - chr3_1:81257496-81257515 None:intergenic 40.0%
CTTAGAGTCATCAGTCATCA+TGG + chr3_1:81257806-81257825 Msa0379850:CDS 40.0%
ATCTTCTGAATTGTGCGGAT+GGG - chr3_1:81257848-81257867 None:intergenic 40.0%
GTGAAAAAATTGCCGCAACA+TGG + chr3_1:81258062-81258081 Msa0379850:CDS 40.0%
! GGGTGATGTTTCTGATTTAG+AGG - chr3_1:81258191-81258210 None:intergenic 40.0%
!!! ACACAGCTGTCTTTTTTAGC+TGG + chr3_1:81258267-81258286 Msa0379850:exon 40.0%
!!! CACAGCTGTCTTTTTTAGCT+GGG + chr3_1:81258268-81258287 Msa0379850:three_prime_UTR 40.0%
TAATACTAGACTGCCCTCAA+TGG - chr3_1:81258342-81258361 None:intergenic 40.0%
TTGTCGCCTTCAATCATCCA+CGG + chr3_1:81253084-81253103 Msa0379850:CDS 45.0%
! ACAGTAGCCACTTTCAACAG+CGG - chr3_1:81253364-81253383 None:intergenic 45.0%
TGGCTACTGTTTCGTTGTCA+AGG + chr3_1:81253374-81253393 Msa0379850:CDS 45.0%
! GACTTTGTGGTGCCAAACTT+TGG + chr3_1:81253951-81253970 Msa0379850:intron 45.0%
!! GGTTTTCCTTTTAGGAGAGG+CGG + chr3_1:81253972-81253991 Msa0379850:intron 45.0%
GTGGAGGAGTGAGTAGTTAT+TGG + chr3_1:81254000-81254019 Msa0379850:intron 45.0%
! TTTAGAGTTTCGGTGCGGTT+CGG - chr3_1:81254033-81254052 None:intergenic 45.0%
CTTCAATTAATCCCCGCTCT+TGG + chr3_1:81254255-81254274 Msa0379850:CDS 45.0%
ATCCCCGCTCTTGGTATAAT+TGG + chr3_1:81254264-81254283 Msa0379850:CDS 45.0%
AGCCAATTATACCAAGAGCG+GGG - chr3_1:81254269-81254288 None:intergenic 45.0%
CCCTGAAACAGTTTACGTCA+AGG - chr3_1:81254598-81254617 None:intergenic 45.0%
!! CCGTTGCTTTAAAATCGGAC+TGG - chr3_1:81254651-81254670 None:intergenic 45.0%
!! GTTAATTATGAGGGTGCTCC+TGG + chr3_1:81255379-81255398 Msa0379850:intron 45.0%
! TGCTGCCGTGTCATTGTTTA+TGG + chr3_1:81255498-81255517 Msa0379850:CDS 45.0%
!! GGCCATTTGTTGTGAATGAG+CGG + chr3_1:81255813-81255832 Msa0379850:CDS 45.0%
!! TGAGGTTTCTGGTAGAGTTG+AGG + chr3_1:81255859-81255878 Msa0379850:CDS 45.0%
TTCTGTAGCATGTAGGATGG+TGG + chr3_1:81255996-81256015 Msa0379850:intron 45.0%
TGGTCACCAACAGTAGTTAG+AGG + chr3_1:81256016-81256035 Msa0379850:CDS 45.0%
TCAGCACCTCTAACTACTGT+TGG - chr3_1:81256025-81256044 None:intergenic 45.0%
! TCACCTTGCTATCAGTCACT+TGG + chr3_1:81256132-81256151 Msa0379850:CDS 45.0%
CATCCAAGTGACTGATAGCA+AGG - chr3_1:81256138-81256157 None:intergenic 45.0%
CTTGCGCATATCAGCTATGA+TGG - chr3_1:81256280-81256299 None:intergenic 45.0%
CATCATAGCTGATATGCGCA+AGG + chr3_1:81256278-81256297 Msa0379850:CDS 45.0%
! AGCTGATATGCGCAAGGTTT+TGG + chr3_1:81256284-81256303 Msa0379850:CDS 45.0%
ATGCATCTCATAGCATAGCC+AGG + chr3_1:81256515-81256534 Msa0379850:intron 45.0%
TGCATCTCATAGCATAGCCA+GGG + chr3_1:81256516-81256535 Msa0379850:intron 45.0%
CTACAGCCTACAAGCCTAAT+TGG - chr3_1:81256549-81256568 None:intergenic 45.0%
ATTGCCACCGTAGTTGAATC+AGG + chr3_1:81256678-81256697 Msa0379850:intron 45.0%
GAAACCTGATTCAACTACGG+TGG - chr3_1:81256685-81256704 None:intergenic 45.0%
! TGATTGGCTATCTTCACCCA+TGG + chr3_1:81256910-81256929 Msa0379850:intron 45.0%
AAATGCTTCATTGCCGCCAT+GGG - chr3_1:81256929-81256948 None:intergenic 45.0%
TAAATGCTTCATTGCCGCCA+TGG - chr3_1:81256930-81256949 None:intergenic 45.0%
! TGGCCTCCTGTTTTATCACA+TGG - chr3_1:81257772-81257791 None:intergenic 45.0%
AAAACAGGAGGCCATTCTCT+TGG + chr3_1:81257778-81257797 Msa0379850:intron 45.0%
TCATCAGTCATCATGGAGCT+CGG + chr3_1:81257813-81257832 Msa0379850:CDS 45.0%
CATCTTCTGAATTGTGCGGA+TGG - chr3_1:81257849-81257868 None:intergenic 45.0%
GTGAAAATGGGGTCGTCAAA+TGG - chr3_1:81257899-81257918 None:intergenic 45.0%
CTCTCGAACGAGTGAAAATG+GGG - chr3_1:81257910-81257929 None:intergenic 45.0%
GCTCTCGAACGAGTGAAAAT+GGG - chr3_1:81257911-81257930 None:intergenic 45.0%
TGCTCTCGAACGAGTGAAAA+TGG - chr3_1:81257912-81257931 None:intergenic 45.0%
TTTCACTCGTTCGAGAGCAA+AGG + chr3_1:81257913-81257932 Msa0379850:CDS 45.0%
TTCACTCGTTCGAGAGCAAA+GGG + chr3_1:81257914-81257933 Msa0379850:CDS 45.0%
TGGGACTTTACACTGGATGA+GGG - chr3_1:81258091-81258110 None:intergenic 45.0%
CTTATCCTGGGACTTTACAC+TGG - chr3_1:81258098-81258117 None:intergenic 45.0%
GATTTAGAGGCCTTCTGAAC+TGG - chr3_1:81258178-81258197 None:intergenic 45.0%
CCTCAATGGCTAATCAGCTA+GGG - chr3_1:81258328-81258347 None:intergenic 45.0%
! CCTAGCTGATTAGCCATTGA+GGG + chr3_1:81258326-81258345 Msa0379850:three_prime_UTR 45.0%
CTTATGTCAAGCTGGGTCTA+TGG + chr3_1:81258367-81258386 Msa0379850:three_prime_UTR 45.0%
TTGTCGCCTTCAATCATCCA+CGG + chr3_1:81253084-81253103 Msa0379850:CDS 45.0%
! ACAGTAGCCACTTTCAACAG+CGG - chr3_1:81253364-81253383 None:intergenic 45.0%
TGGCTACTGTTTCGTTGTCA+AGG + chr3_1:81253374-81253393 Msa0379850:CDS 45.0%
! GACTTTGTGGTGCCAAACTT+TGG + chr3_1:81253951-81253970 Msa0379850:intron 45.0%
!! GGTTTTCCTTTTAGGAGAGG+CGG + chr3_1:81253972-81253991 Msa0379850:intron 45.0%
GTGGAGGAGTGAGTAGTTAT+TGG + chr3_1:81254000-81254019 Msa0379850:intron 45.0%
! TTTAGAGTTTCGGTGCGGTT+CGG - chr3_1:81254033-81254052 None:intergenic 45.0%
CTTCAATTAATCCCCGCTCT+TGG + chr3_1:81254255-81254274 Msa0379850:CDS 45.0%
ATCCCCGCTCTTGGTATAAT+TGG + chr3_1:81254264-81254283 Msa0379850:CDS 45.0%
AGCCAATTATACCAAGAGCG+GGG - chr3_1:81254269-81254288 None:intergenic 45.0%
CCCTGAAACAGTTTACGTCA+AGG - chr3_1:81254598-81254617 None:intergenic 45.0%
!! CCGTTGCTTTAAAATCGGAC+TGG - chr3_1:81254651-81254670 None:intergenic 45.0%
!! GTTAATTATGAGGGTGCTCC+TGG + chr3_1:81255379-81255398 Msa0379850:intron 45.0%
! TGCTGCCGTGTCATTGTTTA+TGG + chr3_1:81255498-81255517 Msa0379850:CDS 45.0%
!! GGCCATTTGTTGTGAATGAG+CGG + chr3_1:81255813-81255832 Msa0379850:CDS 45.0%
!! TGAGGTTTCTGGTAGAGTTG+AGG + chr3_1:81255859-81255878 Msa0379850:CDS 45.0%
TTCTGTAGCATGTAGGATGG+TGG + chr3_1:81255996-81256015 Msa0379850:intron 45.0%
TGGTCACCAACAGTAGTTAG+AGG + chr3_1:81256016-81256035 Msa0379850:CDS 45.0%
TCAGCACCTCTAACTACTGT+TGG - chr3_1:81256025-81256044 None:intergenic 45.0%
! TCACCTTGCTATCAGTCACT+TGG + chr3_1:81256132-81256151 Msa0379850:CDS 45.0%
CATCCAAGTGACTGATAGCA+AGG - chr3_1:81256138-81256157 None:intergenic 45.0%
CTTGCGCATATCAGCTATGA+TGG - chr3_1:81256280-81256299 None:intergenic 45.0%
CATCATAGCTGATATGCGCA+AGG + chr3_1:81256278-81256297 Msa0379850:CDS 45.0%
! AGCTGATATGCGCAAGGTTT+TGG + chr3_1:81256284-81256303 Msa0379850:CDS 45.0%
ATGCATCTCATAGCATAGCC+AGG + chr3_1:81256515-81256534 Msa0379850:intron 45.0%
TGCATCTCATAGCATAGCCA+GGG + chr3_1:81256516-81256535 Msa0379850:intron 45.0%
CTACAGCCTACAAGCCTAAT+TGG - chr3_1:81256549-81256568 None:intergenic 45.0%
ATTGCCACCGTAGTTGAATC+AGG + chr3_1:81256678-81256697 Msa0379850:intron 45.0%
GAAACCTGATTCAACTACGG+TGG - chr3_1:81256685-81256704 None:intergenic 45.0%
! TGATTGGCTATCTTCACCCA+TGG + chr3_1:81256910-81256929 Msa0379850:intron 45.0%
AAATGCTTCATTGCCGCCAT+GGG - chr3_1:81256929-81256948 None:intergenic 45.0%
TAAATGCTTCATTGCCGCCA+TGG - chr3_1:81256930-81256949 None:intergenic 45.0%
! TGGCCTCCTGTTTTATCACA+TGG - chr3_1:81257772-81257791 None:intergenic 45.0%
AAAACAGGAGGCCATTCTCT+TGG + chr3_1:81257778-81257797 Msa0379850:intron 45.0%
TCATCAGTCATCATGGAGCT+CGG + chr3_1:81257813-81257832 Msa0379850:CDS 45.0%
CATCTTCTGAATTGTGCGGA+TGG - chr3_1:81257849-81257868 None:intergenic 45.0%
GTGAAAATGGGGTCGTCAAA+TGG - chr3_1:81257899-81257918 None:intergenic 45.0%
CTCTCGAACGAGTGAAAATG+GGG - chr3_1:81257910-81257929 None:intergenic 45.0%
GCTCTCGAACGAGTGAAAAT+GGG - chr3_1:81257911-81257930 None:intergenic 45.0%
TGCTCTCGAACGAGTGAAAA+TGG - chr3_1:81257912-81257931 None:intergenic 45.0%
TTTCACTCGTTCGAGAGCAA+AGG + chr3_1:81257913-81257932 Msa0379850:CDS 45.0%
TTCACTCGTTCGAGAGCAAA+GGG + chr3_1:81257914-81257933 Msa0379850:CDS 45.0%
TGGGACTTTACACTGGATGA+GGG - chr3_1:81258091-81258110 None:intergenic 45.0%
CTTATCCTGGGACTTTACAC+TGG - chr3_1:81258098-81258117 None:intergenic 45.0%
GATTTAGAGGCCTTCTGAAC+TGG - chr3_1:81258178-81258197 None:intergenic 45.0%
CCTCAATGGCTAATCAGCTA+GGG - chr3_1:81258328-81258347 None:intergenic 45.0%
! CCTAGCTGATTAGCCATTGA+GGG + chr3_1:81258326-81258345 Msa0379850:three_prime_UTR 45.0%
CTTATGTCAAGCTGGGTCTA+TGG + chr3_1:81258367-81258386 Msa0379850:three_prime_UTR 45.0%
ACCATGCCGTGGATGATTGA+AGG - chr3_1:81253093-81253112 None:intergenic 50.0%
CAATCATCCACGGCATGGTT+TGG + chr3_1:81253094-81253113 Msa0379850:CDS 50.0%
AGACATACCAAACCATGCCG+TGG - chr3_1:81253104-81253123 None:intergenic 50.0%
! TTTGTTGTGTCGGTCTGCCT+TGG + chr3_1:81253315-81253334 Msa0379850:CDS 50.0%
CACAAAAGCTTCAGACCGCA+TGG + chr3_1:81253861-81253880 Msa0379850:intron 50.0%
!! TTTCCTTTTAGGAGAGGCGG+TGG + chr3_1:81253975-81253994 Msa0379850:intron 50.0%
GGAGAAATAGAGCCCTGCAA+CGG - chr3_1:81254323-81254342 None:intergenic 50.0%
AACCTTTGCTGCTGTGGACT+GGG + chr3_1:81254494-81254513 Msa0379850:CDS 50.0%
CTGCTCTGCAGGTATCTTTC+TGG + chr3_1:81254523-81254542 Msa0379850:intron 50.0%
TAGAACGCCGACAACAACTG+TGG - chr3_1:81254761-81254780 None:intergenic 50.0%
GCAGGTCGTGAGGTACAATA+AGG + chr3_1:81255589-81255608 Msa0379850:intron 50.0%
GCCGTGAAGAGTTGCTCTTA+AGG - chr3_1:81255710-81255729 None:intergenic 50.0%
! GCACAGAAGGGTTTTTCTGG+AGG + chr3_1:81256338-81256357 Msa0379850:CDS 50.0%
! GCCAGGGCAAAGTACCAATT+AGG + chr3_1:81256532-81256551 Msa0379850:intron 50.0%
GCCTAATTGGTACTTTGCCC+TGG - chr3_1:81256536-81256555 None:intergenic 50.0%
AGGCTTGTAGGCTGTAGCTA+TGG + chr3_1:81256552-81256571 Msa0379850:intron 50.0%
TTGGCTATCTTCACCCATGG+CGG + chr3_1:81256913-81256932 Msa0379850:intron 50.0%
GCTGATATCGGAGATTGTCC+AGG + chr3_1:81257475-81257494 Msa0379850:intron 50.0%
CTGGGACTTTACACTGGATG+AGG - chr3_1:81258092-81258111 None:intergenic 50.0%
CTCATCCAGTGTAAAGTCCC+AGG + chr3_1:81258090-81258109 Msa0379850:CDS 50.0%
! CCCTAGCTGATTAGCCATTG+AGG + chr3_1:81258325-81258344 Msa0379850:three_prime_UTR 50.0%
CCCTCAATGGCTAATCAGCT+AGG - chr3_1:81258329-81258348 None:intergenic 50.0%
GTCAAGCTGGGTCTATGGAA+TGG + chr3_1:81258372-81258391 Msa0379850:three_prime_UTR 50.0%
GCTGGGTCTATGGAATGGTT+CGG + chr3_1:81258377-81258396 Msa0379850:three_prime_UTR 50.0%
!! GGTCTATGGAATGGTTCGGT+TGG + chr3_1:81258381-81258400 Msa0379850:three_prime_UTR 50.0%
ACCATGCCGTGGATGATTGA+AGG - chr3_1:81253093-81253112 None:intergenic 50.0%
CAATCATCCACGGCATGGTT+TGG + chr3_1:81253094-81253113 Msa0379850:CDS 50.0%
AGACATACCAAACCATGCCG+TGG - chr3_1:81253104-81253123 None:intergenic 50.0%
! TTTGTTGTGTCGGTCTGCCT+TGG + chr3_1:81253315-81253334 Msa0379850:CDS 50.0%
CACAAAAGCTTCAGACCGCA+TGG + chr3_1:81253861-81253880 Msa0379850:intron 50.0%
!! TTTCCTTTTAGGAGAGGCGG+TGG + chr3_1:81253975-81253994 Msa0379850:intron 50.0%
GGAGAAATAGAGCCCTGCAA+CGG - chr3_1:81254323-81254342 None:intergenic 50.0%
AACCTTTGCTGCTGTGGACT+GGG + chr3_1:81254494-81254513 Msa0379850:CDS 50.0%
CTGCTCTGCAGGTATCTTTC+TGG + chr3_1:81254523-81254542 Msa0379850:intron 50.0%
TAGAACGCCGACAACAACTG+TGG - chr3_1:81254761-81254780 None:intergenic 50.0%
GCAGGTCGTGAGGTACAATA+AGG + chr3_1:81255589-81255608 Msa0379850:intron 50.0%
GCCGTGAAGAGTTGCTCTTA+AGG - chr3_1:81255710-81255729 None:intergenic 50.0%
! GCACAGAAGGGTTTTTCTGG+AGG + chr3_1:81256338-81256357 Msa0379850:CDS 50.0%
! GCCAGGGCAAAGTACCAATT+AGG + chr3_1:81256532-81256551 Msa0379850:intron 50.0%
GCCTAATTGGTACTTTGCCC+TGG - chr3_1:81256536-81256555 None:intergenic 50.0%
AGGCTTGTAGGCTGTAGCTA+TGG + chr3_1:81256552-81256571 Msa0379850:intron 50.0%
TTGGCTATCTTCACCCATGG+CGG + chr3_1:81256913-81256932 Msa0379850:intron 50.0%
GCTGATATCGGAGATTGTCC+AGG + chr3_1:81257475-81257494 Msa0379850:intron 50.0%
CTGGGACTTTACACTGGATG+AGG - chr3_1:81258092-81258111 None:intergenic 50.0%
CTCATCCAGTGTAAAGTCCC+AGG + chr3_1:81258090-81258109 Msa0379850:CDS 50.0%
! CCCTAGCTGATTAGCCATTG+AGG + chr3_1:81258325-81258344 Msa0379850:three_prime_UTR 50.0%
CCCTCAATGGCTAATCAGCT+AGG - chr3_1:81258329-81258348 None:intergenic 50.0%
GTCAAGCTGGGTCTATGGAA+TGG + chr3_1:81258372-81258391 Msa0379850:three_prime_UTR 50.0%
GCTGGGTCTATGGAATGGTT+CGG + chr3_1:81258377-81258396 Msa0379850:three_prime_UTR 50.0%
!! GGTCTATGGAATGGTTCGGT+TGG + chr3_1:81258381-81258400 Msa0379850:three_prime_UTR 50.0%
GCCTTCAATCATCCACGGCA+TGG + chr3_1:81253089-81253108 Msa0379850:CDS 55.0%
TGAGGCTCCGCTGTTGAAAG+TGG + chr3_1:81253354-81253373 Msa0379850:CDS 55.0%
TGAGATTTGTGTCGGGCGTG+TGG + chr3_1:81253929-81253948 Msa0379850:intron 55.0%
CAACCTTTGCTGCTGTGGAC+TGG + chr3_1:81254493-81254512 Msa0379850:CDS 55.0%
! ACCTTTGCTGCTGTGGACTG+GGG + chr3_1:81254495-81254514 Msa0379850:CDS 55.0%
TCTCTCCGCACAGAAGTGGT+TGG + chr3_1:81255531-81255550 Msa0379850:CDS 55.0%
AGCAGCCAACCACTTCTGTG+CGG - chr3_1:81255539-81255558 None:intergenic 55.0%
! TGGTTGGCTGCTGGTGGTAT+GGG + chr3_1:81255547-81255566 Msa0379850:CDS 55.0%
GCTTTCACTTGCAGGTCGTG+AGG + chr3_1:81255579-81255598 Msa0379850:CDS 55.0%
GCGAACTGATCCAACGTGAG+TGG + chr3_1:81255921-81255940 Msa0379850:intron 55.0%
CTGAATTGTGCGGATGGGTG+TGG - chr3_1:81257843-81257862 None:intergenic 55.0%
GCCTTCAATCATCCACGGCA+TGG + chr3_1:81253089-81253108 Msa0379850:CDS 55.0%
TGAGGCTCCGCTGTTGAAAG+TGG + chr3_1:81253354-81253373 Msa0379850:CDS 55.0%
TGAGATTTGTGTCGGGCGTG+TGG + chr3_1:81253929-81253948 Msa0379850:intron 55.0%
CAACCTTTGCTGCTGTGGAC+TGG + chr3_1:81254493-81254512 Msa0379850:CDS 55.0%
! ACCTTTGCTGCTGTGGACTG+GGG + chr3_1:81254495-81254514 Msa0379850:CDS 55.0%
TCTCTCCGCACAGAAGTGGT+TGG + chr3_1:81255531-81255550 Msa0379850:CDS 55.0%
AGCAGCCAACCACTTCTGTG+CGG - chr3_1:81255539-81255558 None:intergenic 55.0%
! TGGTTGGCTGCTGGTGGTAT+GGG + chr3_1:81255547-81255566 Msa0379850:CDS 55.0%
GCTTTCACTTGCAGGTCGTG+AGG + chr3_1:81255579-81255598 Msa0379850:CDS 55.0%
GCGAACTGATCCAACGTGAG+TGG + chr3_1:81255921-81255940 Msa0379850:intron 55.0%
CTGAATTGTGCGGATGGGTG+TGG - chr3_1:81257843-81257862 None:intergenic 55.0%
! GTGTCGGTCTGCCTTGGTAC+CGG + chr3_1:81253321-81253340 Msa0379850:CDS 60.0%
TGTCGGGCGTGTGGACTTTG+TGG + chr3_1:81253938-81253957 Msa0379850:intron 60.0%
!! CCTTTTAGGAGAGGCGGTGG+CGG + chr3_1:81253978-81253997 Msa0379850:intron 60.0%
AACCTCTCCTACGCCGTTGC+AGG + chr3_1:81254307-81254326 Msa0379850:CDS 60.0%
ACCTCTCCTACGCCGTTGCA+GGG + chr3_1:81254308-81254327 Msa0379850:CDS 60.0%
ATAGAGCCCTGCAACGGCGT+AGG - chr3_1:81254317-81254336 None:intergenic 60.0%
ACCCCAGTCCACAGCAGCAA+AGG - chr3_1:81254499-81254518 None:intergenic 60.0%
CTGGGGTAATGCTGCTCTGC+AGG + chr3_1:81254512-81254531 Msa0379850:CDS 60.0%
TGGGTCTCTCCGCACAGAAG+TGG + chr3_1:81255527-81255546 Msa0379850:CDS 60.0%
! GCACAGAAGTGGTTGGCTGC+TGG + chr3_1:81255538-81255557 Msa0379850:CDS 60.0%
! CAGAAGTGGTTGGCTGCTGG+TGG + chr3_1:81255541-81255560 Msa0379850:CDS 60.0%
! GTGGTTGGCTGCTGGTGGTA+TGG + chr3_1:81255546-81255565 Msa0379850:CDS 60.0%
!! GGATGAGGGCGTCCATGTTG+CGG - chr3_1:81258077-81258096 None:intergenic 60.0%
! GTGTCGGTCTGCCTTGGTAC+CGG + chr3_1:81253321-81253340 Msa0379850:CDS 60.0%
TGTCGGGCGTGTGGACTTTG+TGG + chr3_1:81253938-81253957 Msa0379850:intron 60.0%
!! CCTTTTAGGAGAGGCGGTGG+CGG + chr3_1:81253978-81253997 Msa0379850:intron 60.0%
AACCTCTCCTACGCCGTTGC+AGG + chr3_1:81254307-81254326 Msa0379850:CDS 60.0%
ACCTCTCCTACGCCGTTGCA+GGG + chr3_1:81254308-81254327 Msa0379850:CDS 60.0%
ATAGAGCCCTGCAACGGCGT+AGG - chr3_1:81254317-81254336 None:intergenic 60.0%
ACCCCAGTCCACAGCAGCAA+AGG - chr3_1:81254499-81254518 None:intergenic 60.0%
CTGGGGTAATGCTGCTCTGC+AGG + chr3_1:81254512-81254531 Msa0379850:CDS 60.0%
TGGGTCTCTCCGCACAGAAG+TGG + chr3_1:81255527-81255546 Msa0379850:CDS 60.0%
! GCACAGAAGTGGTTGGCTGC+TGG + chr3_1:81255538-81255557 Msa0379850:CDS 60.0%
! CAGAAGTGGTTGGCTGCTGG+TGG + chr3_1:81255541-81255560 Msa0379850:CDS 60.0%
! GTGGTTGGCTGCTGGTGGTA+TGG + chr3_1:81255546-81255565 Msa0379850:CDS 60.0%
!! GGATGAGGGCGTCCATGTTG+CGG - chr3_1:81258077-81258096 None:intergenic 60.0%
ACACGCTCCAGCCGGTACCA+AGG - chr3_1:81253335-81253354 None:intergenic 65.0%
CCGCCACCGCCTCTCCTAAA+AGG - chr3_1:81253981-81254000 None:intergenic 65.0%
! TTTAGGAGAGGCGGTGGCGG+TGG + chr3_1:81253981-81254000 Msa0379850:intron 65.0%
ACACGCTCCAGCCGGTACCA+AGG - chr3_1:81253335-81253354 None:intergenic 65.0%
CCGCCACCGCCTCTCCTAAA+AGG - chr3_1:81253981-81254000 None:intergenic 65.0%
! TTTAGGAGAGGCGGTGGCGG+TGG + chr3_1:81253981-81254000 Msa0379850:intron 65.0%
!! CGGTCTGCCTTGGTACCGGC+TGG + chr3_1:81253325-81253344 Msa0379850:CDS 70.0%
!! GGTACCGGCTGGAGCGTGTG+AGG + chr3_1:81253336-81253355 Msa0379850:CDS 70.0%
GGAGCCTCACACGCTCCAGC+CGG - chr3_1:81253343-81253362 None:intergenic 70.0%
GCCCTGCAACGGCGTAGGAG+AGG - chr3_1:81254312-81254331 None:intergenic 70.0%
!! CGGTCTGCCTTGGTACCGGC+TGG + chr3_1:81253325-81253344 Msa0379850:CDS 70.0%
!! GGTACCGGCTGGAGCGTGTG+AGG + chr3_1:81253336-81253355 Msa0379850:CDS 70.0%
GGAGCCTCACACGCTCCAGC+CGG - chr3_1:81253343-81253362 None:intergenic 70.0%
GCCCTGCAACGGCGTAGGAG+AGG - chr3_1:81254312-81254331 None:intergenic 70.0%
! AGGAGAGGCGGTGGCGGTGG+AGG + chr3_1:81253984-81254003 Msa0379850:intron 75.0%
! AGGAGAGGCGGTGGCGGTGG+AGG + chr3_1:81253984-81254003 Msa0379850:intron 75.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 81252525 81258586 81252525 ID=Msa0379850;Name=Msa0379850
chr3_1 mRNA 81252525 81258586 81252525 ID=Msa0379850-mRNA-1;Parent=Msa0379850;Name=Msa0379850-mRNA-1;_AED=0.25;_eAED=0.25;_QI=183|0.92|0.92|1|0.92|0.85|14|319|611
chr3_1 exon 81252525 81252697 81252525 ID=Msa0379850-mRNA-1:exon:20508;Parent=Msa0379850-mRNA-1
chr3_1 exon 81252841 81252967 81252841 ID=Msa0379850-mRNA-1:exon:20509;Parent=Msa0379850-mRNA-1
chr3_1 exon 81253056 81253115 81253056 ID=Msa0379850-mRNA-1:exon:20510;Parent=Msa0379850-mRNA-1
chr3_1 exon 81253241 81253395 81253241 ID=Msa0379850-mRNA-1:exon:20511;Parent=Msa0379850-mRNA-1
chr3_1 exon 81254221 81254347 81254221 ID=Msa0379850-mRNA-1:exon:20512;Parent=Msa0379850-mRNA-1
chr3_1 exon 81254436 81254533 81254436 ID=Msa0379850-mRNA-1:exon:20513;Parent=Msa0379850-mRNA-1
chr3_1 exon 81254616 81254729 81254616 ID=Msa0379850-mRNA-1:exon:20514;Parent=Msa0379850-mRNA-1
chr3_1 exon 81255139 81255199 81255139 ID=Msa0379850-mRNA-1:exon:20515;Parent=Msa0379850-mRNA-1
chr3_1 exon 81255451 81255600 81255451 ID=Msa0379850-mRNA-1:exon:20516;Parent=Msa0379850-mRNA-1
chr3_1 exon 81255770 81255880 81255770 ID=Msa0379850-mRNA-1:exon:20517;Parent=Msa0379850-mRNA-1
chr3_1 exon 81256004 81256192 81256004 ID=Msa0379850-mRNA-1:exon:20518;Parent=Msa0379850-mRNA-1
chr3_1 exon 81256276 81256389 81256276 ID=Msa0379850-mRNA-1:exon:20519;Parent=Msa0379850-mRNA-1
chr3_1 exon 81257094 81257150 81257094 ID=Msa0379850-mRNA-1:exon:20520;Parent=Msa0379850-mRNA-1
chr3_1 exon 81257785 81258586 81257785 ID=Msa0379850-mRNA-1:exon:20521;Parent=Msa0379850-mRNA-1
chr3_1 five_prime_UTR 81252525 81252697 81252525 ID=Msa0379850-mRNA-1:five_prime_utr;Parent=Msa0379850-mRNA-1
chr3_1 five_prime_UTR 81252841 81252850 81252841 ID=Msa0379850-mRNA-1:five_prime_utr;Parent=Msa0379850-mRNA-1
chr3_1 CDS 81252851 81252967 81252851 ID=Msa0379850-mRNA-1:cds;Parent=Msa0379850-mRNA-1
chr3_1 CDS 81253056 81253115 81253056 ID=Msa0379850-mRNA-1:cds;Parent=Msa0379850-mRNA-1
chr3_1 CDS 81253241 81253395 81253241 ID=Msa0379850-mRNA-1:cds;Parent=Msa0379850-mRNA-1
chr3_1 CDS 81254221 81254347 81254221 ID=Msa0379850-mRNA-1:cds;Parent=Msa0379850-mRNA-1
chr3_1 CDS 81254436 81254533 81254436 ID=Msa0379850-mRNA-1:cds;Parent=Msa0379850-mRNA-1
chr3_1 CDS 81254616 81254729 81254616 ID=Msa0379850-mRNA-1:cds;Parent=Msa0379850-mRNA-1
chr3_1 CDS 81255139 81255199 81255139 ID=Msa0379850-mRNA-1:cds;Parent=Msa0379850-mRNA-1
chr3_1 CDS 81255451 81255600 81255451 ID=Msa0379850-mRNA-1:cds;Parent=Msa0379850-mRNA-1
chr3_1 CDS 81255770 81255880 81255770 ID=Msa0379850-mRNA-1:cds;Parent=Msa0379850-mRNA-1
chr3_1 CDS 81256004 81256192 81256004 ID=Msa0379850-mRNA-1:cds;Parent=Msa0379850-mRNA-1
chr3_1 CDS 81256276 81256389 81256276 ID=Msa0379850-mRNA-1:cds;Parent=Msa0379850-mRNA-1
chr3_1 CDS 81257094 81257150 81257094 ID=Msa0379850-mRNA-1:cds;Parent=Msa0379850-mRNA-1
chr3_1 CDS 81257785 81258267 81257785 ID=Msa0379850-mRNA-1:cds;Parent=Msa0379850-mRNA-1
chr3_1 three_prime_UTR 81258268 81258586 81258268 ID=Msa0379850-mRNA-1:three_prime_utr;Parent=Msa0379850-mRNA-1
Gene Sequence

>Msa0379850

ATGCTGCATGATCTTATACTTCACTTCAATTCTACAATGACATATTCAGGATCAATTCGATTGTCTCATGACTTTAGGCAATACATTAGTAATACTGGAAGCTGTAGTTTTTGTCATAAACCTAATTCCGGTAATCGATTATGTTTTGTCGCCTTCAATCATCCACGGCATGGTTTGAATATGGATTCTTCAGCACTCATGTTTTCAAGATTACATGTCCAACATAAGCCTGTACCTTCTAGATGTAATGTTTTGTTGTGTCGGTCTGCCTTGGTACCGGCTGGAGCGTGTGAGGCTCCGCTGTTGAAAGTGGCTACTGTTTCGTTGTCAAGGTCATGTAATGCTATATCAGGAAGACCAATTATGCTTCAATTAATCCCCGCTCTTGGTATAATTGGCTTTGCTATCTTTGGTCTTGAACCTCTCCTACGCCGTTGCAGGGCTCTATTTCTCCAAGAATGGAACGATAAAAGTTGGAAGAAAAGTATTTCACGTTATATAATGACATCTTATTTTCAACCTTTGCTGCTGTGGACTGGGGTAATGCTGCTCTGCAGGGGCTTAGATCCACTAGTCGTGCAATCAAAAACCAGTCCGATTTTAAAGCAACGGCTGCTGAATTTTGTCAGATCTTTTTCAACCGTGCTTACATTTGCCTACTGTTCTTCAAGCTTTGTTCGACAAGCACAAAATTTCTGTATGGAGACAAATGCCGACAACAATGAAAGAAAAATGAGCATTGATCTTATCGGGAAAGCTGTATATACTGCAGTATGGGTTGCTGCCGTGTCATTGTTTATGGAGTTGTTGGGTCTCTCCGCACAGAAGTGGTTGGCTGCTGGTGGTATGGGTACAGTATTGCTTTCACTTGCAGGTCGTGAGATATTCACGAACTTCCTTTCAAGTGTGATGATTCATGCAACTCGGCCATTTGTTGTGAATGAGCGGATTAAAACAAAGATTAAAGGATATGAGGTTTCTGGTAGAGTTGAGCATGTAGGATGGTGGTCACCAACAGTAGTTAGAGGTGCTGATTGTGAAGCAGTTCACATTCCTAATCACAAGTTGAGTGTGAATGTTGTGAGGAATCTTAGTAAGAAAACTCATTGGCGCATCAAAACTCACCTTGCTATCAGTCACTTGGATGTCAACAAGATTGATGTGAGTGCTCTTGGTTTAATGACCATCATAGCTGATATGCGCAAGGTTTTGGCCAAAAATCCTCTAGTAGAACAAAAAAAATTGCACAGAAGGGTTTTTCTGGAGGATGTCAATCCAGAAAATCAAGCTCTTATGATATTAGTATCTTGCTTTGTCAAAACTTCACATTCTGAAGAGTATCTCCGTGTTAAGGAGGCCATTCTCTTGGATCTTCTTAGAGTCATCAGTCATCATGGAGCTCGGCTAGCCACACCCATCCGCACAATTCAGAAGATGTACAGTGATTCTGATTTAGAAATTGATCCATTTGACGACCCCATTTTCACTCGTTCGAGAGCAAAGGGAAACCACTCTTTCCCATTCACAAATTCACCTTATAAAGCTAAGCCTTCAACTCAATCAACTACTATAAATGATGAGAAAGATGCCAAGATTCGTGAAACCTTGATAACTGGTTTCAAAGATGAAGGTGAAAAAATTGCCGCAACATGGACGCCCTCATCCAGTGTAAAGTCCCAGGATAAGTTAAAGTCAACATCTAAAGCTAAGACCCGAAATTTAGCCTCTGAATCTTCTGATAATCCAGTTCAGAAGGCCTCTAAATCAGAAACATCACCCCAAATTTTGTTATCATCTAATGAGTCTTCACCATCAAAGCAAGATGAAAAAAAATGA

Protein sequence

>Msa0379850

MLHDLILHFNSTMTYSGSIRLSHDFRQYISNTGSCSFCHKPNSGNRLCFVAFNHPRHGLNMDSSALMFSRLHVQHKPVPSRCNVLLCRSALVPAGACEAPLLKVATVSLSRSCNAISGRPIMLQLIPALGIIGFAIFGLEPLLRRCRALFLQEWNDKSWKKSISRYIMTSYFQPLLLWTGVMLLCRGLDPLVVQSKTSPILKQRLLNFVRSFSTVLTFAYCSSSFVRQAQNFCMETNADNNERKMSIDLIGKAVYTAVWVAAVSLFMELLGLSAQKWLAAGGMGTVLLSLAGREIFTNFLSSVMIHATRPFVVNERIKTKIKGYEVSGRVEHVGWWSPTVVRGADCEAVHIPNHKLSVNVVRNLSKKTHWRIKTHLAISHLDVNKIDVSALGLMTIIADMRKVLAKNPLVEQKKLHRRVFLEDVNPENQALMILVSCFVKTSHSEEYLRVKEAILLDLLRVISHHGARLATPIRTIQKMYSDSDLEIDPFDDPIFTRSRAKGNHSFPFTNSPYKAKPSTQSTTINDEKDAKIRETLITGFKDEGEKIAATWTPSSSVKSQDKLKSTSKAKTRNLASESSDNPVQKASKSETSPQILLSSNESSPSKQDEKK*