Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1272900 | G7LEC4 | 99.315 | 146 | 1 | 0 | 1 | 146 | 1 | 146 | 7.55e-106 | 307 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002490 | Msa1272900 | 0.812897 | 3.363767e-51 | -8.615850e-47 |
| Msa0003700 | Msa1272900 | 0.831334 | 1.770169e-55 | -8.615850e-47 |
| Msa0016670 | Msa1272900 | 0.820793 | 5.685597e-53 | -8.615850e-47 |
| Msa0017510 | Msa1272900 | 0.848670 | 5.285351e-60 | -8.615850e-47 |
| Msa0028420 | Msa1272900 | 0.806491 | 8.015290e-50 | -8.615850e-47 |
| Msa0028640 | Msa1272900 | 0.803033 | 4.227977e-49 | -8.615850e-47 |
| Msa0032920 | Msa1272900 | -0.803934 | 2.749713e-49 | -8.615850e-47 |
| Msa0034270 | Msa1272900 | 0.813600 | 2.358272e-51 | -8.615850e-47 |
| Msa0040450 | Msa1272900 | 0.800446 | 1.435518e-48 | -8.615850e-47 |
| Msa0053780 | Msa1272900 | 0.809943 | 1.473535e-50 | -8.615850e-47 |
| Msa0072370 | Msa1272900 | 0.803158 | 3.984748e-49 | -8.615850e-47 |
| Msa0078650 | Msa1272900 | 0.801170 | 1.021486e-48 | -8.615850e-47 |
| Msa0079080 | Msa1272900 | 0.813364 | 2.656852e-51 | -8.615850e-47 |
| Msa0081520 | Msa1272900 | 0.817857 | 2.653222e-52 | -8.615850e-47 |
| Msa0089630 | Msa1272900 | 0.816020 | 6.858951e-52 | -8.615850e-47 |
| Msa0093400 | Msa1272900 | 0.813253 | 2.811066e-51 | -8.615850e-47 |
| Msa0094120 | Msa1272900 | 0.835661 | 1.473535e-56 | -8.615850e-47 |
| Msa0094140 | Msa1272900 | 0.811407 | 7.111797e-51 | -8.615850e-47 |
| Msa0094850 | Msa1272900 | 0.808860 | 2.517003e-50 | -8.615850e-47 |
| Msa0110970 | Msa1272900 | 0.867984 | 9.143249e-66 | -8.615850e-47 |
| Msa0115160 | Msa1272900 | 0.801587 | 8.394424e-49 | -8.615850e-47 |
| Msa0118570 | Msa1272900 | 0.816056 | 6.732184e-52 | -8.615850e-47 |
| Msa0616220 | Msa1272900 | 0.818239 | 2.174423e-52 | -8.615850e-47 |
| Msa0626450 | Msa1272900 | 0.806035 | 1.000122e-49 | -8.615850e-47 |
| Msa0626490 | Msa1272900 | 0.812360 | 4.408700e-51 | -8.615850e-47 |
| Msa0626510 | Msa1272900 | 0.800947 | 1.134888e-48 | -8.615850e-47 |
| Msa0643300 | Msa1272900 | 0.803905 | 2.788756e-49 | -8.615850e-47 |
| Msa0650020 | Msa1272900 | 0.821156 | 4.689802e-53 | -8.615850e-47 |
| Msa0650090 | Msa1272900 | 0.809852 | 1.541974e-50 | -8.615850e-47 |
| Msa0655560 | Msa1272900 | 0.819751 | 9.850047e-53 | -8.615850e-47 |
| Msa0661790 | Msa1272900 | 0.838640 | 2.549752e-57 | -8.615850e-47 |
| Msa0664600 | Msa1272900 | 0.804715 | 1.890884e-49 | -8.615850e-47 |
| Msa0669320 | Msa1272900 | 0.815471 | 9.091772e-52 | -8.615850e-47 |
| Msa0683510 | Msa1272900 | 0.812568 | 3.970975e-51 | -8.615850e-47 |
| Msa0683570 | Msa1272900 | 0.836144 | 1.111189e-56 | -8.615850e-47 |
| Msa0692080 | Msa1272900 | 0.802100 | 6.584413e-49 | -8.615850e-47 |
| Msa0698770 | Msa1272900 | 0.821854 | 3.236368e-53 | -8.615850e-47 |
| Msa0699550 | Msa1272900 | 0.811078 | 8.379549e-51 | -8.615850e-47 |
| Msa0702340 | Msa1272900 | 0.811039 | 8.544660e-51 | -8.615850e-47 |
| Msa0702590 | Msa1272900 | 0.815091 | 1.103908e-51 | -8.615850e-47 |
| Msa0702660 | Msa1272900 | 0.809251 | 2.075375e-50 | -8.615850e-47 |
| Msa0703230 | Msa1272900 | 0.800137 | 1.659927e-48 | -8.615850e-47 |
| Msa0708520 | Msa1272900 | 0.824833 | 6.514109e-54 | -8.615850e-47 |
| Msa0718550 | Msa1272900 | 0.809581 | 1.762865e-50 | -8.615850e-47 |
| Msa0730430 | Msa1272900 | 0.824626 | 7.288989e-54 | -8.615850e-47 |
| Msa0738040 | Msa1272900 | 0.819317 | 1.237643e-52 | -8.615850e-47 |
| Msa0741240 | Msa1272900 | 0.846132 | 2.631317e-59 | -8.615850e-47 |
| Msa0742740 | Msa1272900 | 0.803104 | 4.088308e-49 | -8.615850e-47 |
| Msa0754520 | Msa1272900 | 0.803709 | 3.063516e-49 | -8.615850e-47 |
| Msa0760380 | Msa1272900 | 0.823270 | 1.516178e-53 | -8.615850e-47 |
| Msa0767300 | Msa1272900 | 0.806166 | 9.385569e-50 | -8.615850e-47 |
| Msa0770720 | Msa1272900 | 0.818053 | 2.395534e-52 | -8.615850e-47 |
| Msa0780250 | Msa1272900 | 0.824684 | 7.063291e-54 | -8.615850e-47 |
| Msa0785210 | Msa1272900 | 0.816931 | 4.287935e-52 | -8.615850e-47 |
| Msa0813740 | Msa1272900 | 0.800156 | 1.645081e-48 | -8.615850e-47 |
| Msa0823820 | Msa1272900 | 0.810030 | 1.411744e-50 | -8.615850e-47 |
| Msa0824660 | Msa1272900 | 0.803827 | 2.894242e-49 | -8.615850e-47 |
| Msa0828560 | Msa1272900 | 0.852597 | 4.158676e-61 | -8.615850e-47 |
| Msa0833220 | Msa1272900 | 0.804097 | 2.543361e-49 | -8.615850e-47 |
| Msa0124060 | Msa1272900 | 0.811506 | 6.766555e-51 | -8.615850e-47 |
| Msa0124340 | Msa1272900 | 0.809469 | 1.863129e-50 | -8.615850e-47 |
| Msa0146260 | Msa1272900 | 0.831561 | 1.556532e-55 | -8.615850e-47 |
| Msa0157290 | Msa1272900 | 0.848537 | 5.755835e-60 | -8.615850e-47 |
| Msa0168500 | Msa1272900 | 0.827992 | 1.151208e-54 | -8.615850e-47 |
| Msa0171290 | Msa1272900 | 0.803212 | 3.882872e-49 | -8.615850e-47 |
| Msa0173890 | Msa1272900 | 0.806678 | 7.319955e-50 | -8.615850e-47 |
| Msa0192510 | Msa1272900 | 0.806660 | 7.385745e-50 | -8.615850e-47 |
| Msa0200260 | Msa1272900 | 0.800213 | 1.601668e-48 | -8.615850e-47 |
| Msa0202950 | Msa1272900 | 0.800936 | 1.140408e-48 | -8.615850e-47 |
| Msa0211150 | Msa1272900 | 0.806072 | 9.825485e-50 | -8.615850e-47 |
| Msa0223690 | Msa1272900 | 0.823353 | 1.450021e-53 | -8.615850e-47 |
| Msa0225320 | Msa1272900 | 0.818216 | 2.200226e-52 | -8.615850e-47 |
| Msa0225680 | Msa1272900 | 0.802420 | 5.657605e-49 | -8.615850e-47 |
| Msa0225740 | Msa1272900 | 0.841151 | 5.655572e-58 | -8.615850e-47 |
| Msa0225760 | Msa1272900 | 0.812888 | 3.380371e-51 | -8.615850e-47 |
| Msa1224840 | Msa1272900 | 0.818081 | 2.361138e-52 | -8.615850e-47 |
| Msa1242240 | Msa1272900 | 0.819341 | 1.221894e-52 | -8.615850e-47 |
| Msa1252190 | Msa1272900 | 0.803665 | 3.128062e-49 | -8.615850e-47 |
| Msa1264020 | Msa1272900 | 0.801020 | 1.096423e-48 | -8.615850e-47 |
| Msa1270610 | Msa1272900 | 0.800050 | 1.728329e-48 | -8.615850e-47 |
| Msa1271990 | Msa1272900 | 0.815553 | 8.713304e-52 | -8.615850e-47 |
| Msa1272900 | Msa1283840 | 0.824073 | 9.833706e-54 | -8.615850e-47 |
| Msa1272900 | Msa1284260 | 0.811286 | 7.554288e-51 | -8.615850e-47 |
| Msa1272900 | Msa1292830 | 0.824648 | 7.204630e-54 | -8.615850e-47 |
| Msa1272900 | Msa1308380 | 0.800640 | 1.310711e-48 | -8.615850e-47 |
| Msa1272900 | Msa1346370 | 0.817186 | 3.757495e-52 | -8.615850e-47 |
| Msa1272900 | Msa1355800 | 0.810280 | 1.246682e-50 | -8.615850e-47 |
| Msa1272900 | Msa1373330 | 0.806631 | 7.490720e-50 | -8.615850e-47 |
| Msa1272900 | Msa1374040 | 0.828739 | 7.604830e-55 | -8.615850e-47 |
| Msa1272900 | Msa1374550 | 0.800474 | 1.417070e-48 | -8.615850e-47 |
| Msa1272900 | Msa1398340 | 0.803357 | 3.623564e-49 | -8.615850e-47 |
| Msa1272900 | Msa1417420 | 0.813798 | 2.132872e-51 | -8.615850e-47 |
| Msa1272900 | Msa1418090 | 0.827683 | 1.365997e-54 | -8.615850e-47 |
| Msa1272900 | Msa1430690 | 0.805028 | 1.626313e-49 | -8.615850e-47 |
| Msa1272900 | Msa1437940 | 0.809417 | 1.911962e-50 | -8.615850e-47 |
| Msa1272900 | Msa1445190 | 0.810328 | 1.217436e-50 | -8.615850e-47 |
| Msa1272900 | Msa1446830 | 0.805783 | 1.129893e-49 | -8.615850e-47 |
| Msa1272900 | Msa1459380 | 0.813840 | 2.087875e-51 | -8.615850e-47 |
| Msa1272900 | Msa1460020 | 0.802467 | 5.533775e-49 | -8.615850e-47 |
| Msa1272900 | Msa1461300 | 0.817554 | 3.104598e-52 | -8.615850e-47 |
| Msa1272900 | Msa1464810 | 0.815090 | 1.104619e-51 | -8.615850e-47 |
| Msa0369850 | Msa1272900 | 0.809943 | 1.473736e-50 | -8.615850e-47 |
| Msa0370380 | Msa1272900 | 0.803622 | 3.192467e-49 | -8.615850e-47 |
| Msa0376350 | Msa1272900 | 0.801430 | 9.037962e-49 | -8.615850e-47 |
| Msa0378720 | Msa1272900 | 0.811566 | 6.567439e-51 | -8.615850e-47 |
| Msa0386850 | Msa1272900 | 0.836341 | 9.905431e-57 | -8.615850e-47 |
| Msa0387510 | Msa1272900 | 0.804419 | 2.179647e-49 | -8.615850e-47 |
| Msa0392510 | Msa1272900 | 0.818521 | 1.876660e-52 | -8.615850e-47 |
| Msa0410500 | Msa1272900 | 0.801903 | 7.227082e-49 | -8.615850e-47 |
| Msa0410650 | Msa1272900 | 0.817247 | 3.640743e-52 | -8.615850e-47 |
| Msa0417270 | Msa1272900 | 0.813300 | 2.744670e-51 | -8.615850e-47 |
| Msa0417880 | Msa1272900 | 0.873234 | 1.721607e-67 | -8.615850e-47 |
| Msa0419820 | Msa1272900 | 0.804134 | 2.499148e-49 | -8.615850e-47 |
| Msa0422850 | Msa1272900 | 0.808442 | 3.090690e-50 | -8.615850e-47 |
| Msa0422930 | Msa1272900 | 0.807624 | 4.615308e-50 | -8.615850e-47 |
| Msa0423900 | Msa1272900 | 0.806238 | 9.064458e-50 | -8.615850e-47 |
| Msa0440750 | Msa1272900 | 0.801613 | 8.290912e-49 | -8.615850e-47 |
| Msa0450720 | Msa1272900 | 0.800530 | 1.380146e-48 | -8.615850e-47 |
| Msa0457470 | Msa1272900 | 0.810271 | 1.252550e-50 | -8.615850e-47 |
| Msa0461720 | Msa1272900 | 0.821975 | 3.032811e-53 | -8.615850e-47 |
| Msa0461730 | Msa1272900 | 0.816895 | 4.368456e-52 | -8.615850e-47 |
| Msa0464380 | Msa1272900 | 0.802879 | 4.549541e-49 | -8.615850e-47 |
| Msa0467430 | Msa1272900 | 0.811146 | 8.100613e-51 | -8.615850e-47 |
| Msa0467490 | Msa1272900 | 0.804443 | 2.154936e-49 | -8.615850e-47 |
| Msa0475790 | Msa1272900 | 0.831359 | 1.745903e-55 | -8.615850e-47 |
| Msa0479170 | Msa1272900 | 0.809132 | 2.200352e-50 | -8.615850e-47 |
| Msa1004550 | Msa1272900 | 0.818949 | 1.500394e-52 | -8.615850e-47 |
| Msa1004600 | Msa1272900 | 0.810319 | 1.222878e-50 | -8.615850e-47 |
| Msa1012810 | Msa1272900 | 0.820135 | 8.046604e-53 | -8.615850e-47 |
| Msa1019470 | Msa1272900 | 0.805477 | 1.310258e-49 | -8.615850e-47 |
| Msa1020510 | Msa1272900 | 0.807803 | 4.229149e-50 | -8.615850e-47 |
| Msa1020670 | Msa1272900 | 0.815186 | 1.051743e-51 | -8.615850e-47 |
| Msa1023400 | Msa1272900 | 0.808173 | 3.527139e-50 | -8.615850e-47 |
| Msa1031930 | Msa1272900 | 0.819098 | 1.387987e-52 | -8.615850e-47 |
| Msa1045140 | Msa1272900 | 0.819870 | 9.252139e-53 | -8.615850e-47 |
| Msa1051830 | Msa1272900 | 0.813154 | 2.955322e-51 | -8.615850e-47 |
| Msa1063950 | Msa1272900 | 0.814084 | 1.844478e-51 | -8.615850e-47 |
| Msa1085200 | Msa1272900 | 0.812590 | 3.926744e-51 | -8.615850e-47 |
| Msa1096970 | Msa1272900 | 0.811194 | 7.909406e-51 | -8.615850e-47 |
| Msa1097640 | Msa1272900 | 0.818211 | 2.206589e-52 | -8.615850e-47 |
| Msa0243100 | Msa1272900 | 0.822174 | 2.728024e-53 | -8.615850e-47 |
| Msa0255090 | Msa1272900 | 0.802414 | 5.674376e-49 | -8.615850e-47 |
| Msa0260610 | Msa1272900 | 0.803985 | 2.683979e-49 | -8.615850e-47 |
| Msa0260670 | Msa1272900 | 0.804489 | 2.108275e-49 | -8.615850e-47 |
| Msa0261340 | Msa1272900 | 0.817702 | 2.875428e-52 | -8.615850e-47 |
| Msa0272690 | Msa1272900 | 0.816217 | 6.195508e-52 | -8.615850e-47 |
| Msa0277180 | Msa1272900 | 0.800182 | 1.624602e-48 | -8.615850e-47 |
| Msa0283520 | Msa1272900 | 0.800896 | 1.162012e-48 | -8.615850e-47 |
| Msa0284410 | Msa1272900 | 0.800380 | 1.480657e-48 | -8.615850e-47 |
| Msa0287650 | Msa1272900 | 0.814620 | 1.404502e-51 | -8.615850e-47 |
| Msa0292400 | Msa1272900 | 0.852880 | 3.453541e-61 | -8.615850e-47 |
| Msa0300690 | Msa1272900 | 0.819115 | 1.375995e-52 | -8.615850e-47 |
| Msa0306300 | Msa1272900 | 0.807838 | 4.156671e-50 | -8.615850e-47 |
| Msa0311280 | Msa1272900 | 0.803024 | 4.245392e-49 | -8.615850e-47 |
| Msa0316810 | Msa1272900 | 0.804205 | 2.415235e-49 | -8.615850e-47 |
| Msa0334220 | Msa1272900 | 0.801124 | 1.043864e-48 | -8.615850e-47 |
| Msa0337540 | Msa1272900 | 0.805226 | 1.478703e-49 | -8.615850e-47 |
| Msa0341910 | Msa1272900 | 0.813679 | 2.264951e-51 | -8.615850e-47 |
| Msa0357990 | Msa1272900 | 0.810004 | 1.430162e-50 | -8.615850e-47 |
| Msa0363070 | Msa1272900 | 0.836648 | 8.272853e-57 | -8.615850e-47 |
| Msa0363200 | Msa1272900 | 0.820039 | 8.464508e-53 | -8.615850e-47 |
| Msa1108160 | Msa1272900 | 0.804418 | 2.181338e-49 | -8.615850e-47 |
| Msa1124110 | Msa1272900 | 0.806842 | 6.757426e-50 | -8.615850e-47 |
| Msa1125940 | Msa1272900 | 0.805338 | 1.400931e-49 | -8.615850e-47 |
| Msa1127890 | Msa1272900 | 0.807822 | 4.189378e-50 | -8.615850e-47 |
| Msa1128710 | Msa1272900 | 0.807520 | 4.855688e-50 | -8.615850e-47 |
| Msa1133000 | Msa1272900 | 0.800134 | 1.661780e-48 | -8.615850e-47 |
| Msa1139810 | Msa1272900 | 0.825800 | 3.846620e-54 | -8.615850e-47 |
| Msa1140210 | Msa1272900 | 0.822331 | 2.508590e-53 | -8.615850e-47 |
| Msa1151910 | Msa1272900 | 0.831722 | 1.420831e-55 | -8.615850e-47 |
| Msa1154710 | Msa1272900 | 0.814236 | 1.707311e-51 | -8.615850e-47 |
| Msa1168950 | Msa1272900 | 0.802585 | 5.230882e-49 | -8.615850e-47 |
| Msa1182860 | Msa1272900 | 0.853554 | 2.212775e-61 | -8.615850e-47 |
| Msa1183120 | Msa1272900 | 0.814574 | 1.437530e-51 | -8.615850e-47 |
| Msa1209460 | Msa1272900 | 0.857911 | 1.181826e-62 | -8.615850e-47 |
| Msa0495320 | Msa1272900 | 0.802697 | 4.961682e-49 | -8.615850e-47 |
| Msa0498060 | Msa1272900 | 0.850907 | 1.253254e-60 | -8.615850e-47 |
| Msa0507680 | Msa1272900 | 0.827023 | 1.966680e-54 | -8.615850e-47 |
| Msa0509610 | Msa1272900 | 0.808687 | 2.739695e-50 | -8.615850e-47 |
| Msa0510980 | Msa1272900 | 0.806683 | 7.300862e-50 | -8.615850e-47 |
| Msa0513160 | Msa1272900 | 0.811944 | 5.434181e-51 | -8.615850e-47 |
| Msa0516320 | Msa1272900 | 0.802106 | 6.565177e-49 | -8.615850e-47 |
| Msa0546680 | Msa1272900 | 0.805589 | 1.240873e-49 | -8.615850e-47 |
| Msa0562220 | Msa1272900 | 0.807017 | 6.206714e-50 | -8.615850e-47 |
| Msa0569200 | Msa1272900 | 0.804256 | 2.357221e-49 | -8.615850e-47 |
| Msa0574890 | Msa1272900 | 0.806727 | 7.148882e-50 | -8.615850e-47 |
| Msa0593650 | Msa1272900 | 0.810638 | 1.043468e-50 | -8.615850e-47 |
| Msa0601750 | Msa1272900 | 0.807836 | 4.161169e-50 | -8.615850e-47 |
| Msa0844240 | Msa1272900 | 0.835771 | 1.381717e-56 | -8.615850e-47 |
| Msa0861870 | Msa1272900 | 0.843340 | 1.487846e-58 | -8.615850e-47 |
| Msa0863010 | Msa1272900 | 0.808852 | 2.526349e-50 | -8.615850e-47 |
| Msa0869780 | Msa1272900 | 0.802141 | 6.458208e-49 | -8.615850e-47 |
| Msa0878290 | Msa1272900 | 0.806642 | 7.449264e-50 | -8.615850e-47 |
| Msa0880140 | Msa1272900 | 0.845540 | 3.811640e-59 | -8.615850e-47 |
| Msa0896970 | Msa1272900 | 0.804701 | 1.903871e-49 | -8.615850e-47 |
| Msa0909230 | Msa1272900 | 0.822625 | 2.142695e-53 | -8.615850e-47 |
| Msa0925180 | Msa1272900 | 0.800247 | 1.576231e-48 | -8.615850e-47 |
| Msa0930780 | Msa1272900 | 0.801647 | 8.158728e-49 | -8.615850e-47 |
| Msa0944190 | Msa1272900 | 0.806559 | 7.757969e-50 | -8.615850e-47 |
| Msa0945110 | Msa1272900 | 0.803235 | 3.839953e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1272900 | MtrunA17_Chr8g0338561 | 99.315 | 146 | 1 | 0 | 1 | 146 | 1 | 146 | 1.45e-109 | 307 |
| Msa1272900 | MtrunA17_Chr7g0234391 | 56.376 | 149 | 59 | 4 | 4 | 146 | 3 | 151 | 1.03e-56 | 174 |
| Msa1272900 | MtrunA17_Chr7g0275091 | 34.731 | 167 | 86 | 7 | 1 | 146 | 1 | 165 | 3.09e-19 | 79.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1272900 | AT5G48500.1 | 52.980 | 151 | 51 | 9 | 1 | 133 | 1 | 149 | 1.67e-41 | 136 |
Find 47 sgRNAs with CRISPR-Local
Find 163 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTGAAAATATAATATTTA+AGG | 0.085777 | 8_3:+6575320 | Msa1272900:three_prime_UTR |
| TTCAAAGAAACAAAACTTCT+TGG | 0.245792 | 8_3:+6572826 | Msa1272900:five_prime_UTR |
| AGAGAGTAAATGAATGATAA+AGG | 0.246101 | 8_3:-6572665 | None:intergenic |
| AGCTATGTTACCGGAAATTA+AGG | 0.264208 | 8_3:+6575500 | Msa1272900:three_prime_UTR |
| CTATAATATGATAATCTTCT+TGG | 0.285873 | 8_3:-6575344 | None:intergenic |
| TGATTGTTGTTCCACGTAGA+AGG | 0.326423 | 8_3:+6573235 | Msa1272900:CDS |
| GTTTGTAAAAGCTATGTTAC+CGG | 0.348816 | 8_3:+6575491 | Msa1272900:three_prime_UTR |
| CAGCATTTGGTAGCTGGGAT+TGG | 0.398463 | 8_3:+6573070 | Msa1272900:CDS |
| TTGTACAAGTCTTCATCAAC+AGG | 0.401129 | 8_3:-6574906 | None:intergenic |
| GATCAAGATCTTTATGTTGC+TGG | 0.401416 | 8_3:+6573177 | Msa1272900:CDS |
| TGATTATTGTGCTAAGCTCT+TGG | 0.402533 | 8_3:+6575372 | Msa1272900:three_prime_UTR |
| CTTTGAGGTGTATCATTGAT+TGG | 0.403387 | 8_3:+6575457 | Msa1272900:three_prime_UTR |
| ATGTACCAGCATTTGGTAGC+TGG | 0.414664 | 8_3:+6573064 | Msa1272900:CDS |
| TTAGTCTTTGATGTACTTTG+AGG | 0.416023 | 8_3:+6575442 | Msa1272900:three_prime_UTR |
| GTTGAGTGAGAGAATGTAGA+AGG | 0.420719 | 8_3:-6572856 | None:intergenic |
| GACATTGGAGTAGGACTTGG+TGG | 0.436895 | 8_3:-6574867 | None:intergenic |
| AGGAACCATGTACCAGCATT+TGG | 0.438003 | 8_3:+6573057 | Msa1272900:CDS |
| GTGGTTGGTAGCAATATAAA+AGG | 0.439309 | 8_3:-6572790 | None:intergenic |
| GATTCAAAGCATTGAGTGAA+TGG | 0.443836 | 8_3:-6573105 | None:intergenic |
| TCATCAACAGGCTTTGGTGT+TGG | 0.446438 | 8_3:-6574894 | None:intergenic |
| GAGAGTAAATGAATGATAAA+GGG | 0.457565 | 8_3:-6572664 | None:intergenic |
| CGTGGAACAACAATCATTGC+AGG | 0.459147 | 8_3:-6573228 | None:intergenic |
| AAGTCTTCATCAACAGGCTT+TGG | 0.463769 | 8_3:-6574900 | None:intergenic |
| CTTGACATTGGAGTAGGACT+TGG | 0.489165 | 8_3:-6574870 | None:intergenic |
| GGTACGTTCTCAACATGAAA+AGG | 0.489964 | 8_3:+6574803 | Msa1272900:CDS |
| ATAGTAGATAGATACTCTCT+TGG | 0.491827 | 8_3:+6575287 | Msa1272900:three_prime_UTR |
| TGTACCAGCATTTGGTAGCT+GGG | 0.509582 | 8_3:+6573065 | Msa1272900:CDS |
| AGCTACCAAATGCTGGTACA+TGG | 0.523568 | 8_3:-6573062 | None:intergenic |
| GATTGTTGTTCCACGTAGAA+GGG | 0.539249 | 8_3:+6573236 | Msa1272900:CDS |
| TTAATGTGAGGTGGAAAGAA+AGG | 0.539311 | 8_3:-6572744 | None:intergenic |
| TTGGTGGTTCTTTCACAACA+TGG | 0.545398 | 8_3:-6574851 | None:intergenic |
| TTTGGTGTTGGTCTTGACAT+TGG | 0.546421 | 8_3:-6574882 | None:intergenic |
| CAATCCCAGCTACCAAATGC+TGG | 0.549172 | 8_3:-6573069 | None:intergenic |
| ATCTTCTTTATGTCAAAACT+AGG | 0.563542 | 8_3:+6574940 | Msa1272900:CDS |
| CACTTGTTTCATCAAAACAA+TGG | 0.567991 | 8_3:+6572878 | Msa1272900:exon |
| GTACATGGTTCCTCTTGAAG+TGG | 0.570983 | 8_3:-6573047 | None:intergenic |
| GTTGGTCTTGACATTGGAGT+AGG | 0.574096 | 8_3:-6574876 | None:intergenic |
| TCTTTATGTCAAAACTAGGA+AGG | 0.584419 | 8_3:+6574944 | Msa1272900:CDS |
| GTTGGTAGCAATATAAAAGG+AGG | 0.585934 | 8_3:-6572787 | None:intergenic |
| TGCTTTGAATCTGCAAGACA+AGG | 0.600221 | 8_3:+6573117 | Msa1272900:CDS |
| AATAGGAATACCACTTCAAG+AGG | 0.609300 | 8_3:+6573037 | Msa1272900:intron |
| TAATGTGAGGTGGAAAGAAA+GGG | 0.631792 | 8_3:-6572743 | None:intergenic |
| GAGCGTGTGTTAATGTGAGG+TGG | 0.636602 | 8_3:-6572753 | None:intergenic |
| ATGAGTCAAGAAAATTTGAG+AGG | 0.637897 | 8_3:+6575223 | Msa1272900:three_prime_UTR |
| TTTGAATCTGCAAGACAAGG+TGG | 0.656042 | 8_3:+6573120 | Msa1272900:CDS |
| TGTGAGCGTGTGTTAATGTG+AGG | 0.723893 | 8_3:-6572756 | None:intergenic |
| AGGTGACATACCCTTCTACG+TGG | 0.761356 | 8_3:-6573246 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTACTATTTTTTTTTTTTG+AGG | + | chr8_3:6573552-6573571 | Msa1272900:intron | 10.0% |
| !!! | TTACTATTTTTTTTTTTTGA+GGG | + | chr8_3:6573553-6573572 | Msa1272900:intron | 10.0% |
| !!! | TAATTATTTTTCATTAACAA+AGG | - | chr8_3:6573708-6573727 | None:intergenic | 10.0% |
| !! | AAAAATAATTAATTTCTCTA+TGG | + | chr8_3:6573717-6573736 | Msa1272900:intron | 10.0% |
| !! | TAAGAAAAATGTATAAATAA+AGG | + | chr8_3:6573959-6573978 | Msa1272900:intron | 10.0% |
| !! | AAGAAAAATGTATAAATAAA+GGG | + | chr8_3:6573960-6573979 | Msa1272900:intron | 10.0% |
| !!! | AACAAAAAAAATTTCTTTTT+TGG | + | chr8_3:6574452-6574471 | Msa1272900:intron | 10.0% |
| !!! | AAATGAAAATTTAATTTTAG+TGG | - | chr8_3:6575007-6575026 | None:intergenic | 10.0% |
| !!! | ATCATTTTTATTTACAATAT+TGG | - | chr8_3:6575249-6575268 | None:intergenic | 10.0% |
| !! | AAATAAAAATGATTAAATGA+AGG | + | chr8_3:6575256-6575275 | Msa1272900:three_prime_UTR | 10.0% |
| !!! | TATGAAAACTAAATGTTTTA+TGG | + | chr8_3:6572987-6573006 | Msa1272900:intron | 15.0% |
| !!! | ATGAAAACTAAATGTTTTAT+GGG | + | chr8_3:6572988-6573007 | Msa1272900:intron | 15.0% |
| !! | TGGATTTAAATCATTAATTA+TGG | + | chr8_3:6573508-6573527 | Msa1272900:intron | 15.0% |
| !!! | ATTAATTATGGATTTTTGTT+TGG | + | chr8_3:6573520-6573539 | Msa1272900:intron | 15.0% |
| !! | AGAAAAATGTATAAATAAAG+GGG | + | chr8_3:6573961-6573980 | Msa1272900:intron | 15.0% |
| !! | AGTATTAATTAGAGTTATAA+AGG | + | chr8_3:6574019-6574038 | Msa1272900:intron | 15.0% |
| !! | GTATTAATTAGAGTTATAAA+GGG | + | chr8_3:6574020-6574039 | Msa1272900:intron | 15.0% |
| !!! | TTTTAATGAGAAATGTTAAT+CGG | + | chr8_3:6574165-6574184 | Msa1272900:intron | 15.0% |
| !! | TTAAGGATACTAAAAAAAAT+TGG | + | chr8_3:6574205-6574224 | Msa1272900:intron | 15.0% |
| !! | TAAGGATACTAAAAAAAATT+GGG | + | chr8_3:6574206-6574225 | Msa1272900:intron | 15.0% |
| !! | ACTTTATCACAATTAAAATT+GGG | - | chr8_3:6574515-6574534 | None:intergenic | 15.0% |
| !! | TACTTTATCACAATTAAAAT+TGG | - | chr8_3:6574516-6574535 | None:intergenic | 15.0% |
| !!! | AATTTTAATTGTGATAAAGT+AGG | + | chr8_3:6574515-6574534 | Msa1272900:intron | 15.0% |
| !! | AAAAAAAGTGATATTAGAAA+AGG | - | chr8_3:6575142-6575161 | None:intergenic | 15.0% |
| !! | TAAGTGTATATAACAAACAA+AGG | - | chr8_3:6572922-6572941 | None:intergenic | 20.0% |
| !!! | TGAAAACTAAATGTTTTATG+GGG | + | chr8_3:6572989-6573008 | Msa1272900:intron | 20.0% |
| !! | AATAAGAAACAAAACTAACA+AGG | - | chr8_3:6573284-6573303 | None:intergenic | 20.0% |
| !!! | TGTTTCTTATTTTCTAAAAG+AGG | + | chr8_3:6573293-6573312 | Msa1272900:intron | 20.0% |
| !! | ATGCAAAACAATAAAATACT+AGG | - | chr8_3:6573474-6573493 | None:intergenic | 20.0% |
| !! | ATAATTAATTTCTCTATGGT+AGG | + | chr8_3:6573721-6573740 | Msa1272900:intron | 20.0% |
| !! | ATCATTAATGTCAATACAAT+AGG | - | chr8_3:6573771-6573790 | None:intergenic | 20.0% |
| !! | TTATATTTGTTTCATTAACC+AGG | + | chr8_3:6574356-6574375 | Msa1272900:intron | 20.0% |
| !! | TATATTTGTTTCATTAACCA+GGG | + | chr8_3:6574357-6574376 | Msa1272900:intron | 20.0% |
| !! | TTAATAATGCATCTAACTTT+AGG | + | chr8_3:6574555-6574574 | Msa1272900:intron | 20.0% |
| !! | TTTATAAAAAGTGACATTTG+TGG | - | chr8_3:6574741-6574760 | None:intergenic | 20.0% |
| !!! | TAATTTGTTGTTAACATTGT+AGG | + | chr8_3:6574776-6574795 | Msa1272900:intron | 20.0% |
| !! | AATTGAATATGCACTAATAT+AGG | - | chr8_3:6575063-6575082 | None:intergenic | 20.0% |
| !! | CTATAATATGATAATCTTCT+TGG | - | chr8_3:6575347-6575366 | None:intergenic | 20.0% |
| !!! | TTTCTTCTTTTTCTCTTAAA+CGG | + | chr8_3:6575401-6575420 | Msa1272900:three_prime_UTR | 20.0% |
| ! | TTCAAAGAAACAAAACTTCT+TGG | + | chr8_3:6572826-6572845 | Msa1272900:five_prime_UTR | 25.0% |
| !! | GAAAACTAAATGTTTTATGG+GGG | + | chr8_3:6572990-6573009 | Msa1272900:intron | 25.0% |
| !! | AAAACTAAATGTTTTATGGG+GGG | + | chr8_3:6572991-6573010 | Msa1272900:intron | 25.0% |
| ! | TCACATATATTGTCAAAGTT+AGG | + | chr8_3:6573331-6573350 | Msa1272900:intron | 25.0% |
| ! | CACATATATTGTCAAAGTTA+GGG | + | chr8_3:6573332-6573351 | Msa1272900:intron | 25.0% |
| !!! | TTGTTTTGCATGTCTTTAAT+TGG | + | chr8_3:6573483-6573502 | Msa1272900:intron | 25.0% |
| ! | TAAATTGTATTGCATCAAAG+TGG | + | chr8_3:6573637-6573656 | Msa1272900:intron | 25.0% |
| ! | ATTAATGTCAATACAATAGG+AGG | - | chr8_3:6573768-6573787 | None:intergenic | 25.0% |
| !! | TTGAAATGACTCAGTTATTT+TGG | + | chr8_3:6574091-6574110 | Msa1272900:intron | 25.0% |
| !!! | TGAAATGACTCAGTTATTTT+GGG | + | chr8_3:6574092-6574111 | Msa1272900:intron | 25.0% |
| !! | TGACTAACAATTTCTTCTTT+TGG | - | chr8_3:6574271-6574290 | None:intergenic | 25.0% |
| ! | ATATTTGTTTCATTAACCAG+GGG | + | chr8_3:6574358-6574377 | Msa1272900:intron | 25.0% |
| ! | TGCATTATTAAACAAAGTCA+TGG | - | chr8_3:6574546-6574565 | None:intergenic | 25.0% |
| !! | GCTTTATTGTCTATGTTAAT+GGG | + | chr8_3:6574577-6574596 | Msa1272900:intron | 25.0% |
| ! | TCACCAAAATTATAGACAAT+GGG | + | chr8_3:6574600-6574619 | Msa1272900:intron | 25.0% |
| !! | ATCTTGTTATGATATACACA+TGG | - | chr8_3:6574628-6574647 | None:intergenic | 25.0% |
| ! | ATCTTCTTTATGTCAAAACT+AGG | + | chr8_3:6574940-6574959 | Msa1272900:CDS | 25.0% |
| ! | TTATGAAAGCAAAGTAGTAA+AGG | - | chr8_3:6575031-6575050 | None:intergenic | 25.0% |
| !!! | CCTTTTTTTTCCTTAATTTC+CGG | - | chr8_3:6575513-6575532 | None:intergenic | 25.0% |
| !!! | TTCTTTGAAGTGTGTTTTTC+AGG | - | chr8_3:6572815-6572834 | None:intergenic | 30.0% |
| CACTTGTTTCATCAAAACAA+TGG | + | chr8_3:6572878-6572897 | Msa1272900:exon | 30.0% | |
| !! | TTTTTATTTGGGGGTGTAAT+AGG | + | chr8_3:6573020-6573039 | Msa1272900:intron | 30.0% |
| TAACAAGGATAAGAGAGTTA+AGG | - | chr8_3:6573269-6573288 | None:intergenic | 30.0% | |
| TTGCATGTCTTTAATTGGAT+TGG | + | chr8_3:6573488-6573507 | Msa1272900:intron | 30.0% | |
| TATTGCATCAAAGTGGTTAT+AGG | + | chr8_3:6573644-6573663 | Msa1272900:intron | 30.0% | |
| ! | TCTTTCTTTTTCTACTCTCA+CGG | - | chr8_3:6573678-6573697 | None:intergenic | 30.0% |
| ATAAGTGTGAAATGAGTCAA+GGG | - | chr8_3:6573939-6573958 | None:intergenic | 30.0% | |
| AATAAGTGTGAAATGAGTCA+AGG | - | chr8_3:6573940-6573959 | None:intergenic | 30.0% | |
| AGAGTTATAAAGGGAAAAAG+TGG | + | chr8_3:6574029-6574048 | Msa1272900:intron | 30.0% | |
| !!! | GGACACTCTTTTTTAGTAAA+TGG | + | chr8_3:6574113-6574132 | Msa1272900:intron | 30.0% |
| !! | GGCTTTATTGTCTATGTTAA+TGG | + | chr8_3:6574576-6574595 | Msa1272900:intron | 30.0% |
| GTCACCAAAATTATAGACAA+TGG | + | chr8_3:6574599-6574618 | Msa1272900:intron | 30.0% | |
| ! | GATCCCATTGTCTATAATTT+TGG | - | chr8_3:6574606-6574625 | None:intergenic | 30.0% |
| GTTGTTAACATTGTAGGAAA+AGG | + | chr8_3:6574782-6574801 | Msa1272900:intron | 30.0% | |
| AGGATGTGAAAAAGCAAAAT+TGG | + | chr8_3:6574823-6574842 | Msa1272900:CDS | 30.0% | |
| GGATGTGAAAAAGCAAAATT+GGG | + | chr8_3:6574824-6574843 | Msa1272900:CDS | 30.0% | |
| !! | GTTTTGACATAAAGAAGATC+TGG | - | chr8_3:6574939-6574958 | None:intergenic | 30.0% |
| TCTTTATGTCAAAACTAGGA+AGG | + | chr8_3:6574944-6574963 | Msa1272900:CDS | 30.0% | |
| ATGAGTCAAGAAAATTTGAG+AGG | + | chr8_3:6575223-6575242 | Msa1272900:three_prime_UTR | 30.0% | |
| ATAGTAGATAGATACTCTCT+TGG | + | chr8_3:6575287-6575306 | Msa1272900:three_prime_UTR | 30.0% | |
| ! | TTAGTCTTTGATGTACTTTG+AGG | + | chr8_3:6575442-6575461 | Msa1272900:three_prime_UTR | 30.0% |
| GTTTGTAAAAGCTATGTTAC+CGG | + | chr8_3:6575491-6575510 | Msa1272900:three_prime_UTR | 30.0% | |
| CCGGAAATTAAGGAAAAAAA+AGG | + | chr8_3:6575510-6575529 | Msa1272900:three_prime_UTR | 30.0% | |
| TAATGTGAGGTGGAAAGAAA+GGG | - | chr8_3:6572746-6572765 | None:intergenic | 35.0% | |
| TTAATGTGAGGTGGAAAGAA+AGG | - | chr8_3:6572747-6572766 | None:intergenic | 35.0% | |
| !! | GTTGGTAGCAATATAAAAGG+AGG | - | chr8_3:6572790-6572809 | None:intergenic | 35.0% |
| !! | GTGGTTGGTAGCAATATAAA+AGG | - | chr8_3:6572793-6572812 | None:intergenic | 35.0% |
| !!! | TTTGAAGTGTGTTTTTCAGG+TGG | - | chr8_3:6572812-6572831 | None:intergenic | 35.0% |
| AATAGGAATACCACTTCAAG+AGG | + | chr8_3:6573037-6573056 | Msa1272900:intron | 35.0% | |
| !! | GATTCAAAGCATTGAGTGAA+TGG | - | chr8_3:6573108-6573127 | None:intergenic | 35.0% |
| GATCAAGATCTTTATGTTGC+TGG | + | chr8_3:6573177-6573196 | Msa1272900:CDS | 35.0% | |
| GGGAATCTATCATTCTATGT+TGG | + | chr8_3:6573352-6573371 | Msa1272900:intron | 35.0% | |
| TACTACTGTGTATCCTCAAT+TGG | + | chr8_3:6573582-6573601 | Msa1272900:intron | 35.0% | |
| ! | TTTTCACACTCTTCCAATTG+AGG | - | chr8_3:6573598-6573617 | None:intergenic | 35.0% |
| AGTCAAGGGCTCAATTAATT+CGG | - | chr8_3:6573925-6573944 | None:intergenic | 35.0% | |
| AGTAAATGGCTCAGTTAATC+CGG | + | chr8_3:6574127-6574146 | Msa1272900:intron | 35.0% | |
| GAAATGTTAATCGGTATCCT+CGG | + | chr8_3:6574174-6574193 | Msa1272900:intron | 35.0% | |
| ! | TATCCTCGGAACATTGATTA+AGG | + | chr8_3:6574188-6574207 | Msa1272900:intron | 35.0% |
| TATCCTTAATCAATGTTCCG+AGG | - | chr8_3:6574194-6574213 | None:intergenic | 35.0% | |
| TAAAATTGGGTCATGCTAAC+CGG | - | chr8_3:6574502-6574521 | None:intergenic | 35.0% | |
| TTGTACAAGTCTTCATCAAC+AGG | - | chr8_3:6574909-6574928 | None:intergenic | 35.0% | |
| AGTGGAGAAAAAGCAAAAGA+GGG | - | chr8_3:6574989-6575008 | None:intergenic | 35.0% | |
| TAGTGGAGAAAAAGCAAAAG+AGG | - | chr8_3:6574990-6575009 | None:intergenic | 35.0% | |
| TGATTATTGTGCTAAGCTCT+TGG | + | chr8_3:6575372-6575391 | Msa1272900:three_prime_UTR | 35.0% | |
| !! | CTTTGAGGTGTATCATTGAT+TGG | + | chr8_3:6575457-6575476 | Msa1272900:three_prime_UTR | 35.0% |
| AGCTATGTTACCGGAAATTA+AGG | + | chr8_3:6575500-6575519 | Msa1272900:three_prime_UTR | 35.0% | |
| !!! | AAGTGTGTTTTTCAGGTGGT+TGG | - | chr8_3:6572808-6572827 | None:intergenic | 40.0% |
| GTTGAGTGAGAGAATGTAGA+AGG | - | chr8_3:6572859-6572878 | None:intergenic | 40.0% | |
| ! | TAAATGTTTTATGGGGGGTG+TGG | + | chr8_3:6572996-6573015 | Msa1272900:intron | 40.0% |
| !!! | GGGGGTGTGGTTTTTTATTT+GGG | + | chr8_3:6573009-6573028 | Msa1272900:intron | 40.0% |
| !!! | GGGGTGTGGTTTTTTATTTG+GGG | + | chr8_3:6573010-6573029 | Msa1272900:intron | 40.0% |
| !!! | GGGTGTGGTTTTTTATTTGG+GGG | + | chr8_3:6573011-6573030 | Msa1272900:intron | 40.0% |
| ! | TGCTTTGAATCTGCAAGACA+AGG | + | chr8_3:6573117-6573136 | Msa1272900:CDS | 40.0% |
| TTTGAATCTGCAAGACAAGG+TGG | + | chr8_3:6573120-6573139 | Msa1272900:CDS | 40.0% | |
| ! | TGATTGTTGTTCCACGTAGA+AGG | + | chr8_3:6573235-6573254 | Msa1272900:CDS | 40.0% |
| ! | GATTGTTGTTCCACGTAGAA+GGG | + | chr8_3:6573236-6573255 | Msa1272900:CDS | 40.0% |
| GTCAAGGGCTCAATTAATTC+GGG | - | chr8_3:6573924-6573943 | None:intergenic | 40.0% | |
| GTAAATGGCTCAGTTAATCC+GGG | + | chr8_3:6574128-6574147 | Msa1272900:intron | 40.0% | |
| ! | TTAACAAGTGTCTGAGACAC+CGG | + | chr8_3:6574480-6574499 | Msa1272900:intron | 40.0% |
| GGTACGTTCTCAACATGAAA+AGG | + | chr8_3:6574803-6574822 | Msa1272900:CDS | 40.0% | |
| ! | TTGGTGGTTCTTTCACAACA+TGG | - | chr8_3:6574854-6574873 | None:intergenic | 40.0% |
| !! | TTTGGTGTTGGTCTTGACAT+TGG | - | chr8_3:6574885-6574904 | None:intergenic | 40.0% |
| AAGTCTTCATCAACAGGCTT+TGG | - | chr8_3:6574903-6574922 | None:intergenic | 40.0% | |
| ! | AAAAGCAAAAGAGGGTGTGT+GGG | - | chr8_3:6574981-6575000 | None:intergenic | 40.0% |
| ! | AAAAAGCAAAAGAGGGTGTG+TGG | - | chr8_3:6574982-6575001 | None:intergenic | 40.0% |
| ! | TTTTTGCCAATGCAGAAGAG+AGG | + | chr8_3:6575158-6575177 | Msa1272900:intron | 40.0% |
| ! | TTTTGCCAATGCAGAAGAGA+GGG | + | chr8_3:6575159-6575178 | Msa1272900:intron | 40.0% |
| TGTGAGCGTGTGTTAATGTG+AGG | - | chr8_3:6572759-6572778 | None:intergenic | 45.0% | |
| !!! | GGGGGGTGTGGTTTTTTATT+TGG | + | chr8_3:6573008-6573027 | Msa1272900:intron | 45.0% |
| GTACATGGTTCCTCTTGAAG+TGG | - | chr8_3:6573050-6573069 | None:intergenic | 45.0% | |
| AGGAACCATGTACCAGCATT+TGG | + | chr8_3:6573057-6573076 | Msa1272900:CDS | 45.0% | |
| AGCTACCAAATGCTGGTACA+TGG | - | chr8_3:6573065-6573084 | None:intergenic | 45.0% | |
| ! | ATGTACCAGCATTTGGTAGC+TGG | + | chr8_3:6573064-6573083 | Msa1272900:CDS | 45.0% |
| ! | TGTACCAGCATTTGGTAGCT+GGG | + | chr8_3:6573065-6573084 | Msa1272900:CDS | 45.0% |
| CGTGGAACAACAATCATTGC+AGG | - | chr8_3:6573231-6573250 | None:intergenic | 45.0% | |
| AGGGCTCAATTAATTCGGGA+CGG | - | chr8_3:6573920-6573939 | None:intergenic | 45.0% | |
| AAAATTTACTCCCTCCGTCC+CGG | - | chr8_3:6574149-6574168 | None:intergenic | 45.0% | |
| AAAATGTTAACCAGTGCCCC+TGG | - | chr8_3:6574377-6574396 | None:intergenic | 45.0% | |
| ! | GGTGTCTCAGACACTTGTTA+AGG | - | chr8_3:6574481-6574500 | None:intergenic | 45.0% |
| CTTGACATTGGAGTAGGACT+TGG | - | chr8_3:6574873-6574892 | None:intergenic | 45.0% | |
| !! | GTTGGTCTTGACATTGGAGT+AGG | - | chr8_3:6574879-6574898 | None:intergenic | 45.0% |
| ! | TCATCAACAGGCTTTGGTGT+TGG | - | chr8_3:6574897-6574916 | None:intergenic | 45.0% |
| ! | AAAGCAAAAGAGGGTGTGTG+GGG | - | chr8_3:6574980-6574999 | None:intergenic | 45.0% |
| !!! | AATTTTATTTTTTTATTACA+TGG | + | chr8_3:6573431-6573450 | Msa1272900:intron | 5.0% |
| !!! | ATTTTATTTTTTTATTACAT+GGG | + | chr8_3:6573432-6573451 | Msa1272900:intron | 5.0% |
| !!! | TATAAAATTAATAAAACTTT+TGG | - | chr8_3:6575114-6575133 | None:intergenic | 5.0% |
| !! | ATTTGAAAATATAATATTTA+AGG | + | chr8_3:6575320-6575339 | Msa1272900:three_prime_UTR | 5.0% |
| GAGCGTGTGTTAATGTGAGG+TGG | - | chr8_3:6572756-6572775 | None:intergenic | 50.0% | |
| CAATCCCAGCTACCAAATGC+TGG | - | chr8_3:6573072-6573091 | None:intergenic | 50.0% | |
| ! | CAGCATTTGGTAGCTGGGAT+TGG | + | chr8_3:6573070-6573089 | Msa1272900:CDS | 50.0% |
| AGGTGACATACCCTTCTACG+TGG | - | chr8_3:6573249-6573268 | None:intergenic | 50.0% | |
| ATGGCTCAGTTAATCCGGGA+CGG | + | chr8_3:6574132-6574151 | Msa1272900:intron | 50.0% | |
| GTCATGTTAACCAGTGCCCT+CGG | + | chr8_3:6574228-6574247 | Msa1272900:intron | 50.0% | |
| TCATGTTAACCAGTGCCCTC+GGG | + | chr8_3:6574229-6574248 | Msa1272900:intron | 50.0% | |
| TTCCTTAACCAGTGACCCGA+GGG | - | chr8_3:6574247-6574266 | None:intergenic | 50.0% | |
| ! | GTTTCATTAACCAGGGGCAC+TGG | + | chr8_3:6574364-6574383 | Msa1272900:intron | 50.0% |
| GACATTGGAGTAGGACTTGG+TGG | - | chr8_3:6574870-6574889 | None:intergenic | 50.0% | |
| CACAACCCTCTCTTCTGCAT+TGG | - | chr8_3:6575167-6575186 | None:intergenic | 50.0% | |
| CTCAGTTAATCCGGGACGGA+GGG | + | chr8_3:6574136-6574155 | Msa1272900:intron | 55.0% | |
| CTTCCTTAACCAGTGACCCG+AGG | - | chr8_3:6574248-6574267 | None:intergenic | 55.0% | |
| GCTCAGTTAATCCGGGACGG+AGG | + | chr8_3:6574135-6574154 | Msa1272900:intron | 60.0% | |
| ! | TGCCCTCGGGTCACTGGTTA+AGG | + | chr8_3:6574242-6574261 | Msa1272900:intron | 60.0% |
| AACCAGTGCCCTCGGGTCAC+TGG | + | chr8_3:6574236-6574255 | Msa1272900:intron | 65.0% | |
| ! | AACCAGTGACCCGAGGGCAC+TGG | - | chr8_3:6574241-6574260 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 6572666 | 6575544 | 6572666 | ID=Msa1272900;Name=Msa1272900 |
| chr8_3 | mRNA | 6572666 | 6575544 | 6572666 | ID=Msa1272900-mRNA-1;Parent=Msa1272900;Name=Msa1272900-mRNA-1;_AED=0.28;_eAED=0.28;_QI=231|1|1|1|0.66|0.75|4|324|146 |
| chr8_3 | exon | 6572666 | 6572905 | 6572666 | ID=Msa1272900-mRNA-1:exon:2456;Parent=Msa1272900-mRNA-1 |
| chr8_3 | exon | 6573042 | 6573257 | 6573042 | ID=Msa1272900-mRNA-1:exon:2457;Parent=Msa1272900-mRNA-1 |
| chr8_3 | exon | 6574798 | 6574965 | 6574798 | ID=Msa1272900-mRNA-1:exon:2458;Parent=Msa1272900-mRNA-1 |
| chr8_3 | exon | 6575173 | 6575544 | 6575173 | ID=Msa1272900-mRNA-1:exon:2459;Parent=Msa1272900-mRNA-1 |
| chr8_3 | five_prime_UTR | 6572666 | 6572896 | 6572666 | ID=Msa1272900-mRNA-1:five_prime_utr;Parent=Msa1272900-mRNA-1 |
| chr8_3 | CDS | 6572897 | 6572905 | 6572897 | ID=Msa1272900-mRNA-1:cds;Parent=Msa1272900-mRNA-1 |
| chr8_3 | CDS | 6573042 | 6573257 | 6573042 | ID=Msa1272900-mRNA-1:cds;Parent=Msa1272900-mRNA-1 |
| chr8_3 | CDS | 6574798 | 6574965 | 6574798 | ID=Msa1272900-mRNA-1:cds;Parent=Msa1272900-mRNA-1 |
| chr8_3 | CDS | 6575173 | 6575220 | 6575173 | ID=Msa1272900-mRNA-1:cds;Parent=Msa1272900-mRNA-1 |
| chr8_3 | three_prime_UTR | 6575221 | 6575544 | 6575221 | ID=Msa1272900-mRNA-1:three_prime_utr;Parent=Msa1272900-mRNA-1 |
| Gene Sequence |
| Protein sequence |
