Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0401330 | XP_003599439.1 | 80.556 | 288 | 23 | 4 | 12 | 267 | 83 | 369 | 1.26e-148 | 432 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0401330 | sp|Q9ZSL6|SIGD_ARATH | 52.273 | 264 | 103 | 4 | 27 | 268 | 121 | 383 | 1.35e-83 | 260 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0401330 | G7J0X0 | 80.556 | 288 | 23 | 4 | 12 | 267 | 83 | 369 | 6.02e-149 | 432 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008850 | Msa0401330 | 0.815294 | 9.953570e-52 | -8.615850e-47 |
| Msa0017120 | Msa0401330 | 0.803947 | 2.733024e-49 | -8.615850e-47 |
| Msa0020630 | Msa0401330 | 0.811602 | 6.447837e-51 | -8.615850e-47 |
| Msa0027540 | Msa0401330 | 0.808436 | 3.099422e-50 | -8.615850e-47 |
| Msa0044710 | Msa0401330 | 0.802874 | 4.560866e-49 | -8.615850e-47 |
| Msa0068410 | Msa0401330 | 0.814881 | 1.229338e-51 | -8.615850e-47 |
| Msa0075310 | Msa0401330 | 0.804194 | 2.427806e-49 | -8.615850e-47 |
| Msa0105340 | Msa0401330 | 0.801434 | 9.022128e-49 | -8.615850e-47 |
| Msa0114250 | Msa0401330 | 0.812755 | 3.614650e-51 | -8.615850e-47 |
| Msa0135980 | Msa0401330 | 0.816205 | 6.236206e-52 | -8.615850e-47 |
| Msa0159750 | Msa0401330 | 0.808314 | 3.292266e-50 | -8.615850e-47 |
| Msa0168100 | Msa0401330 | 0.811656 | 6.277283e-51 | -8.615850e-47 |
| Msa0182930 | Msa0401330 | 0.828246 | 1.000199e-54 | -8.615850e-47 |
| Msa0183610 | Msa0401330 | 0.809134 | 2.199108e-50 | -8.615850e-47 |
| Msa0183620 | Msa0401330 | 0.805439 | 1.334176e-49 | -8.615850e-47 |
| Msa0207000 | Msa0401330 | 0.811534 | 6.672018e-51 | -8.615850e-47 |
| Msa0208520 | Msa0401330 | 0.812154 | 4.889558e-51 | -8.615850e-47 |
| Msa0223100 | Msa0401330 | 0.815089 | 1.105191e-51 | -8.615850e-47 |
| Msa0223290 | Msa0401330 | 0.824311 | 8.647522e-54 | -8.615850e-47 |
| Msa0223380 | Msa0401330 | 0.810638 | 1.043629e-50 | -8.615850e-47 |
| Msa0401330 | Msa0411280 | 0.828527 | 8.556409e-55 | -8.615850e-47 |
| Msa0401330 | Msa0413740 | 0.810214 | 1.288297e-50 | -8.615850e-47 |
| Msa0401330 | Msa0431830 | 0.809181 | 2.147818e-50 | -8.615850e-47 |
| Msa0401330 | Msa0436460 | 0.802946 | 4.405986e-49 | -8.615850e-47 |
| Msa0401330 | Msa0448080 | 0.848548 | 5.713804e-60 | -8.615850e-47 |
| Msa0401330 | Msa0484690 | 0.820871 | 5.454614e-53 | -8.615850e-47 |
| Msa0401330 | Msa0490300 | 0.813048 | 3.117002e-51 | -8.615850e-47 |
| Msa0401330 | Msa0490350 | 0.807261 | 5.509995e-50 | -8.615850e-47 |
| Msa0401330 | Msa0505390 | 0.806544 | 7.812251e-50 | -8.615850e-47 |
| Msa0401330 | Msa0508200 | 0.812736 | 3.648449e-51 | -8.615850e-47 |
| Msa0401330 | Msa0508610 | 0.804174 | 2.451700e-49 | -8.615850e-47 |
| Msa0401330 | Msa0520220 | 0.802493 | 5.466225e-49 | -8.615850e-47 |
| Msa0401330 | Msa0535030 | 0.806796 | 6.911368e-50 | -8.615850e-47 |
| Msa0401330 | Msa0535060 | 0.808499 | 3.005853e-50 | -8.615850e-47 |
| Msa0401330 | Msa0546380 | 0.809340 | 1.985983e-50 | -8.615850e-47 |
| Msa0401330 | Msa0564930 | 0.805297 | 1.429163e-49 | -8.615850e-47 |
| Msa0401330 | Msa0598250 | 0.803090 | 4.115065e-49 | -8.615850e-47 |
| Msa0401330 | Msa0605620 | 0.802609 | 5.173170e-49 | -8.615850e-47 |
| Msa0401330 | Msa0606060 | 0.809633 | 1.718001e-50 | -8.615850e-47 |
| Msa0401330 | Msa0607200 | 0.825378 | 4.843965e-54 | -8.615850e-47 |
| Msa0401330 | Msa0619980 | 0.817309 | 3.524954e-52 | -8.615850e-47 |
| Msa0401330 | Msa0620640 | 0.809519 | 1.817962e-50 | -8.615850e-47 |
| Msa0401330 | Msa0638320 | 0.805152 | 1.532559e-49 | -8.615850e-47 |
| Msa0401330 | Msa0647000 | 0.831651 | 1.479116e-55 | -8.615850e-47 |
| Msa0401330 | Msa0654060 | 0.802323 | 5.925077e-49 | -8.615850e-47 |
| Msa0401330 | Msa0674220 | 0.804981 | 1.664026e-49 | -8.615850e-47 |
| Msa0401330 | Msa0677270 | 0.803574 | 3.267251e-49 | -8.615850e-47 |
| Msa0401330 | Msa0686610 | 0.808935 | 2.425278e-50 | -8.615850e-47 |
| Msa0401330 | Msa0706370 | 0.814535 | 1.466409e-51 | -8.615850e-47 |
| Msa0401330 | Msa0743640 | 0.838075 | 3.566888e-57 | -8.615850e-47 |
| Msa0401330 | Msa0787720 | 0.803101 | 4.093146e-49 | -8.615850e-47 |
| Msa0401330 | Msa0789270 | 0.803588 | 3.244476e-49 | -8.615850e-47 |
| Msa0401330 | Msa0789280 | 0.806031 | 1.002266e-49 | -8.615850e-47 |
| Msa0401330 | Msa0789290 | 0.802796 | 4.733416e-49 | -8.615850e-47 |
| Msa0401330 | Msa0851740 | 0.801644 | 8.169412e-49 | -8.615850e-47 |
| Msa0401330 | Msa0854570 | 0.809379 | 1.948033e-50 | -8.615850e-47 |
| Msa0401330 | Msa0863760 | 0.834976 | 2.194659e-56 | -8.615850e-47 |
| Msa0401330 | Msa0870620 | 0.811846 | 5.706469e-51 | -8.615850e-47 |
| Msa0401330 | Msa0907700 | 0.803865 | 2.842905e-49 | -8.615850e-47 |
| Msa0401330 | Msa0925160 | 0.801291 | 9.650147e-49 | -8.615850e-47 |
| Msa0401330 | Msa0946320 | 0.810236 | 1.274535e-50 | -8.615850e-47 |
| Msa0401330 | Msa0973230 | 0.800395 | 1.470304e-48 | -8.615850e-47 |
| Msa0401330 | Msa0980440 | 0.802513 | 5.414846e-49 | -8.615850e-47 |
| Msa0401330 | Msa1018790 | 0.808766 | 2.635285e-50 | -8.615850e-47 |
| Msa0401330 | Msa1038320 | 0.805186 | 1.507786e-49 | -8.615850e-47 |
| Msa0401330 | Msa1097380 | 0.824821 | 6.557050e-54 | -8.615850e-47 |
| Msa0401330 | Msa1118140 | 0.801106 | 1.052968e-48 | -8.615850e-47 |
| Msa0401330 | Msa1159360 | 0.803575 | 3.264754e-49 | -8.615850e-47 |
| Msa0401330 | Msa1172590 | 0.808207 | 3.468674e-50 | -8.615850e-47 |
| Msa0401330 | Msa1184580 | 0.814864 | 1.239890e-51 | -8.615850e-47 |
| Msa0401330 | Msa1226600 | 0.817346 | 3.458882e-52 | -8.615850e-47 |
| Msa0401330 | Msa1265960 | 0.805671 | 1.192999e-49 | -8.615850e-47 |
| Msa0401330 | Msa1280130 | 0.820324 | 7.283648e-53 | -8.615850e-47 |
| Msa0401330 | Msa1358870 | -0.806198 | 9.242748e-50 | -8.615850e-47 |
| Msa0401330 | Msa1374440 | 0.823504 | 1.337018e-53 | -8.615850e-47 |
| Msa0401330 | Msa1379990 | 0.813650 | 2.299168e-51 | -8.615850e-47 |
| Msa0401330 | Msa1397970 | 0.811067 | 8.427628e-51 | -8.615850e-47 |
| Msa0401330 | Msa1418200 | 0.815553 | 8.717285e-52 | -8.615850e-47 |
| Msa0401330 | Msa1422270 | 0.813578 | 2.384207e-51 | -8.615850e-47 |
| Msa0401330 | Msa1431000 | 0.805726 | 1.161404e-49 | -8.615850e-47 |
| Msa0401330 | Msa1456810 | 0.806153 | 9.446587e-50 | -8.615850e-47 |
| Msa0252180 | Msa0401330 | 0.813273 | 2.782307e-51 | -8.615850e-47 |
| Msa0257310 | Msa0401330 | 0.813630 | 2.322745e-51 | -8.615850e-47 |
| Msa0265820 | Msa0401330 | 0.800017 | 1.755240e-48 | -8.615850e-47 |
| Msa0280490 | Msa0401330 | 0.835577 | 1.547741e-56 | -8.615850e-47 |
| Msa0284780 | Msa0401330 | 0.815609 | 8.467950e-52 | -8.615850e-47 |
| Msa0288240 | Msa0401330 | 0.815095 | 1.101821e-51 | -8.615850e-47 |
| Msa0296760 | Msa0401330 | 0.805395 | 1.363027e-49 | -8.615850e-47 |
| Msa0298970 | Msa0401330 | 0.802503 | 5.440601e-49 | -8.615850e-47 |
| Msa0326670 | Msa0401330 | 0.811462 | 6.919092e-51 | -8.615850e-47 |
| Msa0357380 | Msa0401330 | 0.815632 | 8.371414e-52 | -8.615850e-47 |
| Msa0357390 | Msa0401330 | 0.815391 | 9.469522e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0401330 | MtrunA17_Chr3g0090001 | 80.556 | 288 | 23 | 4 | 12 | 267 | 83 | 369 | 1.16e-152 | 432 |
| Msa0401330 | MtrunA17_Chr3g0089951 | 92.079 | 101 | 7 | 1 | 147 | 247 | 1 | 100 | 8.89e-52 | 165 |
| Msa0401330 | MtrunA17_Chr7g0264491 | 38.049 | 205 | 122 | 3 | 67 | 267 | 317 | 520 | 4.27e-35 | 132 |
| Msa0401330 | MtrunA17_Chr3g0145921 | 33.962 | 212 | 133 | 3 | 60 | 267 | 329 | 537 | 5.46e-32 | 124 |
| Msa0401330 | MtrunA17_Chr1g0180881 | 34.146 | 205 | 130 | 3 | 67 | 267 | 321 | 524 | 1.31e-28 | 114 |
| Msa0401330 | MtrunA17_Chr4g0021031 | 37.264 | 212 | 118 | 6 | 67 | 267 | 261 | 468 | 2.71e-28 | 113 |
| Msa0401330 | MtrunA17_Chr1g0146481 | 32.381 | 210 | 124 | 5 | 66 | 267 | 315 | 514 | 2.35e-26 | 108 |
| Msa0401330 | MtrunA17_Chr3g0126401 | 26.697 | 221 | 152 | 4 | 55 | 268 | 264 | 481 | 1.64e-12 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0401330 | AT5G13730.1 | 52.273 | 264 | 103 | 4 | 27 | 268 | 121 | 383 | 1.37e-84 | 260 |
| Msa0401330 | AT2G36990.1 | 35.096 | 208 | 128 | 4 | 65 | 267 | 305 | 510 | 1.38e-31 | 123 |
| Msa0401330 | AT1G08540.1 | 34.804 | 204 | 128 | 3 | 68 | 267 | 333 | 535 | 2.04e-31 | 123 |
| Msa0401330 | AT1G64860.1 | 37.156 | 218 | 110 | 7 | 67 | 267 | 259 | 466 | 6.60e-28 | 112 |
| Msa0401330 | AT1G64860.2 | 37.156 | 218 | 110 | 7 | 67 | 267 | 259 | 466 | 7.02e-28 | 112 |
| Msa0401330 | AT3G53920.1 | 28.241 | 216 | 145 | 3 | 59 | 267 | 324 | 536 | 3.55e-20 | 90.5 |
| Msa0401330 | AT3G53920.2 | 39.024 | 82 | 50 | 0 | 59 | 140 | 324 | 405 | 5.25e-14 | 72.0 |
Find 41 sgRNAs with CRISPR-Local
Find 260 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACAGTTTACATCCTCTATT+TGG | 0.181620 | 3_2:+26870801 | None:intergenic |
| ATAGCTCTGTCCAATGAAAT+TGG | 0.288432 | 3_2:+26869889 | None:intergenic |
| ACAAGGCATTATTAAAGCTT+TGG | 0.340294 | 3_2:-26870754 | Msa0401330:CDS |
| TATTTATAGGGAGAAAAGTA+TGG | 0.343959 | 3_2:-26870048 | Msa0401330:intron |
| AACTGTCTACATATGTTTAC+TGG | 0.372719 | 3_2:-26870785 | Msa0401330:CDS |
| GGAACCATTGGACTTCTTCA+TGG | 0.384588 | 3_2:-26870840 | Msa0401330:CDS |
| ATATTATACTTTGGACTCAA+TGG | 0.405310 | 3_2:-26869627 | Msa0401330:CDS |
| TTCTCCGGAATCATTTCAAC+TGG | 0.416683 | 3_2:+26869729 | None:intergenic |
| GAGCAGACAACCAATTTCAT+TGG | 0.418328 | 3_2:-26869899 | Msa0401330:CDS |
| CACCGGTAATCTGACTAATC+TGG | 0.431896 | 3_2:+26870722 | None:intergenic |
| GAGATTGTAATATTATACTT+TGG | 0.445378 | 3_2:-26869636 | Msa0401330:CDS |
| TGAAATGATTCCGGAGAAGA+TGG | 0.476752 | 3_2:-26869724 | Msa0401330:CDS |
| GAAAGAATAAGACAGATTCA+TGG | 0.490155 | 3_2:-26869575 | Msa0401330:CDS |
| TTTAACCAGGAAGGAACCAT+TGG | 0.503437 | 3_2:-26870852 | Msa0401330:intron |
| TGAGCTTTGTTTATGTCTCA+AGG | 0.505679 | 3_2:-26871655 | Msa0401330:intron |
| TGCCTCTCAACCATCTTCTC+CGG | 0.508577 | 3_2:+26869714 | None:intergenic |
| AGGACCAGTTGAAATGATTC+CGG | 0.510261 | 3_2:-26869733 | Msa0401330:CDS |
| AGAGGCAGCTAGTGAAGCAA+GGG | 0.515818 | 3_2:-26869698 | Msa0401330:CDS |
| CAGTATTAAGTTGCTCTGAT+CGG | 0.520178 | 3_2:+26869864 | None:intergenic |
| TATTAGTCTGAGATTATAGC+AGG | 0.520645 | 3_2:-26869753 | Msa0401330:intron |
| CTGTAAAACTTGTTTCTGAA+AGG | 0.534187 | 3_2:-26869921 | Msa0401330:CDS |
| TCAATCGCAACACGATATCA+AGG | 0.537772 | 3_2:-26870971 | Msa0401330:CDS |
| TGTCTACATATGTTTACTGG+TGG | 0.558995 | 3_2:-26870782 | Msa0401330:CDS |
| AAAGAATGACAGAACATGAA+AGG | 0.564645 | 3_2:-26871057 | Msa0401330:CDS |
| TCTTAAGACATTGTTAGCCT+CGG | 0.567970 | 3_2:+26870008 | None:intergenic |
| ATAGGGAGAAAAGTATGGAA+TGG | 0.569556 | 3_2:-26870043 | Msa0401330:intron |
| ATGTCTTAAGACGAAGACTA+AGG | 0.570194 | 3_2:-26869996 | Msa0401330:CDS |
| GAGAGGCAGCTAGTGAAGCA+AGG | 0.574300 | 3_2:-26869699 | Msa0401330:CDS |
| ATGACATGAGGAGGAAGAGA+AGG | 0.574625 | 3_2:-26871778 | None:intergenic |
| AACATATAATAAAATTTCTG+AGG | 0.579615 | 3_2:-26869965 | Msa0401330:CDS |
| TGCTCCATGAAGAAGTCCAA+TGG | 0.592473 | 3_2:+26870836 | None:intergenic |
| AAGCTTTCAAGATCTCATCC+AGG | 0.604181 | 3_2:-26870939 | Msa0401330:intron |
| TCAGAGCAACTTAATACTGA+AGG | 0.606839 | 3_2:-26869860 | Msa0401330:intron |
| ATCGAATCGATGACATGAGG+AGG | 0.613782 | 3_2:-26871787 | None:intergenic |
| GTTTACTGGTGGATTAAACA+AGG | 0.614224 | 3_2:-26870771 | Msa0401330:CDS |
| TTCCGGAGAAGATGGTTGAG+AGG | 0.622689 | 3_2:-26869716 | Msa0401330:CDS |
| GCAACACGATATCAAGGCAA+AGG | 0.626796 | 3_2:-26870965 | Msa0401330:CDS |
| CCTATCTCCTCAAAAGACAG+AGG | 0.660124 | 3_2:+26869597 | None:intergenic |
| TCTTAAGACGAAGACTAAGG+CGG | 0.687494 | 3_2:-26869993 | Msa0401330:CDS |
| GAGGCAGCTAGTGAAGCAAG+GGG | 0.693291 | 3_2:-26869697 | Msa0401330:CDS |
| AGATTAGCTCGTGATTATCG+CGG | 0.696504 | 3_2:-26871004 | Msa0401330:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTTACATTATACAAAA+TGG | + | chr3_2:26870130-26870149 | None:intergenic | 10.0% |
| !! | AAAATTTACATTATACAAAA+TGG | + | chr3_2:26870130-26870149 | None:intergenic | 10.0% |
| !! | CTTAAAAATAATATGAAAAG+TGG | - | chr3_2:26869927-26869946 | Msa0401330:CDS | 15.0% |
| !! | AAATTCGAAATCAATTTAAA+TGG | + | chr3_2:26870059-26870078 | None:intergenic | 15.0% |
| !! | TTTAACAAATATCAAAATAC+TGG | + | chr3_2:26870409-26870428 | None:intergenic | 15.0% |
| !!! | TATAAATTTTTTTTTGTGGT+AGG | - | chr3_2:26870618-26870637 | Msa0401330:intron | 15.0% |
| !!! | ATAAATTTTTTTTTGTGGTA+GGG | - | chr3_2:26870619-26870638 | Msa0401330:intron | 15.0% |
| !!! | TCAGAAATTTTATTATATGT+TGG | + | chr3_2:26871342-26871361 | None:intergenic | 15.0% |
| !! | AACATATAATAAAATTTCTG+AGG | - | chr3_2:26871341-26871360 | Msa0401330:intron | 15.0% |
| !! | CTTAAAAATAATATGAAAAG+TGG | - | chr3_2:26869927-26869946 | Msa0401330:CDS | 15.0% |
| !! | AAATTCGAAATCAATTTAAA+TGG | + | chr3_2:26870059-26870078 | None:intergenic | 15.0% |
| !! | TTTAACAAATATCAAAATAC+TGG | + | chr3_2:26870409-26870428 | None:intergenic | 15.0% |
| !!! | TATAAATTTTTTTTTGTGGT+AGG | - | chr3_2:26870618-26870637 | Msa0401330:intron | 15.0% |
| !!! | ATAAATTTTTTTTTGTGGTA+GGG | - | chr3_2:26870619-26870638 | Msa0401330:intron | 15.0% |
| !!! | TCAGAAATTTTATTATATGT+TGG | + | chr3_2:26871342-26871361 | None:intergenic | 15.0% |
| !! | AACATATAATAAAATTTCTG+AGG | - | chr3_2:26871341-26871360 | Msa0401330:intron | 15.0% |
| !! | AGAAAAAGAAGGAAAAATTT+GGG | - | chr3_2:26869551-26869570 | Msa0401330:CDS | 20.0% |
| !! | TCTCTTTCATAATATAAGAT+AGG | + | chr3_2:26869708-26869727 | None:intergenic | 20.0% |
| !!! | TTCTGAAATTATGACTAAAA+TGG | + | chr3_2:26869772-26869791 | None:intergenic | 20.0% |
| !! | CATAATTTATTTATCAACCA+CGG | + | chr3_2:26869986-26870005 | None:intergenic | 20.0% |
| !! | TTGAGCATAATTAACATATA+TGG | - | chr3_2:26870022-26870041 | Msa0401330:CDS | 20.0% |
| !! | TTATACAAAATGGATGAATT+TGG | + | chr3_2:26870120-26870139 | None:intergenic | 20.0% |
| !!! | TATAATGTAAATTTTCTTGC+TGG | - | chr3_2:26870135-26870154 | Msa0401330:intron | 20.0% |
| !!! | ATTTGTTAAAGTTTCTCATT+AGG | - | chr3_2:26870419-26870438 | Msa0401330:intron | 20.0% |
| !!! | TAAATTTTTTTTTGTGGTAG+GGG | - | chr3_2:26870620-26870639 | Msa0401330:intron | 20.0% |
| !! | AATAAATCTTATGCTAAGTT+TGG | - | chr3_2:26870934-26870953 | Msa0401330:intron | 20.0% |
| !! | TATTATGCAATACTTCTATA+TGG | - | chr3_2:26871177-26871196 | Msa0401330:intron | 20.0% |
| !!! | TTGGTTAGTTTGTTATTTAT+AGG | - | chr3_2:26871245-26871264 | Msa0401330:intron | 20.0% |
| !!! | TGGTTAGTTTGTTATTTATA+GGG | - | chr3_2:26871246-26871265 | Msa0401330:intron | 20.0% |
| !!! | TACAATTTCATTCGTATTTT+AGG | - | chr3_2:26871472-26871491 | Msa0401330:intron | 20.0% |
| !! | GAGATTGTAATATTATACTT+TGG | - | chr3_2:26871670-26871689 | Msa0401330:CDS | 20.0% |
| !! | AGAAAAAGAAGGAAAAATTT+GGG | - | chr3_2:26869551-26869570 | Msa0401330:CDS | 20.0% |
| !! | TCTCTTTCATAATATAAGAT+AGG | + | chr3_2:26869708-26869727 | None:intergenic | 20.0% |
| !!! | TTCTGAAATTATGACTAAAA+TGG | + | chr3_2:26869772-26869791 | None:intergenic | 20.0% |
| !! | CATAATTTATTTATCAACCA+CGG | + | chr3_2:26869986-26870005 | None:intergenic | 20.0% |
| !! | TTGAGCATAATTAACATATA+TGG | - | chr3_2:26870022-26870041 | Msa0401330:CDS | 20.0% |
| !! | TTATACAAAATGGATGAATT+TGG | + | chr3_2:26870120-26870139 | None:intergenic | 20.0% |
| !!! | TATAATGTAAATTTTCTTGC+TGG | - | chr3_2:26870135-26870154 | Msa0401330:intron | 20.0% |
| !!! | ATTTGTTAAAGTTTCTCATT+AGG | - | chr3_2:26870419-26870438 | Msa0401330:intron | 20.0% |
| !!! | TAAATTTTTTTTTGTGGTAG+GGG | - | chr3_2:26870620-26870639 | Msa0401330:intron | 20.0% |
| !! | AATAAATCTTATGCTAAGTT+TGG | - | chr3_2:26870934-26870953 | Msa0401330:intron | 20.0% |
| !! | TATTATGCAATACTTCTATA+TGG | - | chr3_2:26871177-26871196 | Msa0401330:intron | 20.0% |
| !!! | TTGGTTAGTTTGTTATTTAT+AGG | - | chr3_2:26871245-26871264 | Msa0401330:intron | 20.0% |
| !!! | TGGTTAGTTTGTTATTTATA+GGG | - | chr3_2:26871246-26871265 | Msa0401330:intron | 20.0% |
| !!! | TACAATTTCATTCGTATTTT+AGG | - | chr3_2:26871472-26871491 | Msa0401330:intron | 20.0% |
| !! | GAGATTGTAATATTATACTT+TGG | - | chr3_2:26871670-26871689 | Msa0401330:CDS | 20.0% |
| ! | GAGAAAAAGAAGGAAAAATT+TGG | - | chr3_2:26869550-26869569 | Msa0401330:CDS | 25.0% |
| ! | AGAGAATGTTGAGAAAAATT+TGG | - | chr3_2:26869589-26869608 | Msa0401330:CDS | 25.0% |
| ! | GAGAATGTTGAGAAAAATTT+GGG | - | chr3_2:26869590-26869609 | Msa0401330:CDS | 25.0% |
| ! | GAAATTATGACTAAAATGGT+GGG | + | chr3_2:26869768-26869787 | None:intergenic | 25.0% |
| ! | TGAAATTATGACTAAAATGG+TGG | + | chr3_2:26869769-26869788 | None:intergenic | 25.0% |
| !! | GTCCTAGAATTGTAATTTTA+AGG | - | chr3_2:26869889-26869908 | Msa0401330:CDS | 25.0% |
| ! | GTCCTTAAAATTACAATTCT+AGG | + | chr3_2:26869894-26869913 | None:intergenic | 25.0% |
| ! | ATTCATATTCCATTACTAAC+AGG | - | chr3_2:26870169-26870188 | Msa0401330:intron | 25.0% |
| !!! | GCATTTTAATTCATTTAACC+AGG | - | chr3_2:26870441-26870460 | Msa0401330:intron | 25.0% |
| ! | TTTAATTCATTTAACCAGGA+AGG | - | chr3_2:26870445-26870464 | Msa0401330:intron | 25.0% |
| ! | GAAAAATTTGATCCAAATAG+AGG | - | chr3_2:26870493-26870512 | Msa0401330:intron | 25.0% |
| !!! | TTTATAAAAAAGTGTCTCAC+CGG | + | chr3_2:26870604-26870623 | None:intergenic | 25.0% |
| !!! | AAATTTTTTTTTGTGGTAGG+GGG | - | chr3_2:26870621-26870640 | Msa0401330:intron | 25.0% |
| !! | ACTTTACAACTATTCTAAGA+AGG | - | chr3_2:26870665-26870684 | Msa0401330:intron | 25.0% |
| !!! | CTCTTTTTAATTGCGATAAA+GGG | + | chr3_2:26870975-26870994 | None:intergenic | 25.0% |
| !!! | TCTCTTTTTAATTGCGATAA+AGG | + | chr3_2:26870976-26870995 | None:intergenic | 25.0% |
| !! | CTCTATTTTCATATTCTCTT+TGG | - | chr3_2:26871115-26871134 | Msa0401330:intron | 25.0% |
| ! | GACTGTTTATTATGAATGTT+TGG | - | chr3_2:26871226-26871245 | Msa0401330:intron | 25.0% |
| ! | TATTTATAGGGAGAAAAGTA+TGG | - | chr3_2:26871258-26871277 | Msa0401330:intron | 25.0% |
| ! | ATATTATACTTTGGACTCAA+TGG | - | chr3_2:26871679-26871698 | Msa0401330:CDS | 25.0% |
| ! | GAGAAAAAGAAGGAAAAATT+TGG | - | chr3_2:26869550-26869569 | Msa0401330:CDS | 25.0% |
| ! | AGAGAATGTTGAGAAAAATT+TGG | - | chr3_2:26869589-26869608 | Msa0401330:CDS | 25.0% |
| ! | GAGAATGTTGAGAAAAATTT+GGG | - | chr3_2:26869590-26869609 | Msa0401330:CDS | 25.0% |
| ! | GAAATTATGACTAAAATGGT+GGG | + | chr3_2:26869768-26869787 | None:intergenic | 25.0% |
| ! | TGAAATTATGACTAAAATGG+TGG | + | chr3_2:26869769-26869788 | None:intergenic | 25.0% |
| !! | GTCCTAGAATTGTAATTTTA+AGG | - | chr3_2:26869889-26869908 | Msa0401330:CDS | 25.0% |
| ! | GTCCTTAAAATTACAATTCT+AGG | + | chr3_2:26869894-26869913 | None:intergenic | 25.0% |
| ! | ATTCATATTCCATTACTAAC+AGG | - | chr3_2:26870169-26870188 | Msa0401330:intron | 25.0% |
| !!! | GCATTTTAATTCATTTAACC+AGG | - | chr3_2:26870441-26870460 | Msa0401330:intron | 25.0% |
| ! | TTTAATTCATTTAACCAGGA+AGG | - | chr3_2:26870445-26870464 | Msa0401330:intron | 25.0% |
| ! | GAAAAATTTGATCCAAATAG+AGG | - | chr3_2:26870493-26870512 | Msa0401330:intron | 25.0% |
| !!! | TTTATAAAAAAGTGTCTCAC+CGG | + | chr3_2:26870604-26870623 | None:intergenic | 25.0% |
| !!! | AAATTTTTTTTTGTGGTAGG+GGG | - | chr3_2:26870621-26870640 | Msa0401330:intron | 25.0% |
| !! | ACTTTACAACTATTCTAAGA+AGG | - | chr3_2:26870665-26870684 | Msa0401330:intron | 25.0% |
| !!! | CTCTTTTTAATTGCGATAAA+GGG | + | chr3_2:26870975-26870994 | None:intergenic | 25.0% |
| !!! | TCTCTTTTTAATTGCGATAA+AGG | + | chr3_2:26870976-26870995 | None:intergenic | 25.0% |
| !! | CTCTATTTTCATATTCTCTT+TGG | - | chr3_2:26871115-26871134 | Msa0401330:intron | 25.0% |
| ! | GACTGTTTATTATGAATGTT+TGG | - | chr3_2:26871226-26871245 | Msa0401330:intron | 25.0% |
| ! | TATTTATAGGGAGAAAAGTA+TGG | - | chr3_2:26871258-26871277 | Msa0401330:intron | 25.0% |
| ! | ATATTATACTTTGGACTCAA+TGG | - | chr3_2:26871679-26871698 | Msa0401330:CDS | 25.0% |
| ! | GAAAAATTTGGGATGTATGA+TGG | - | chr3_2:26869562-26869581 | Msa0401330:CDS | 30.0% |
| !!! | GTTTTTGAGTTCAATAGAAG+AGG | - | chr3_2:26869627-26869646 | Msa0401330:CDS | 30.0% |
| ! | GTTAACGATGTTTAAAATCG+TGG | - | chr3_2:26869949-26869968 | Msa0401330:CDS | 30.0% |
| ATGGATAATCCTGTTAGTAA+TGG | + | chr3_2:26870181-26870200 | None:intergenic | 30.0% | |
| TGTTGTTAATCAACACACAA+TGG | + | chr3_2:26870200-26870219 | None:intergenic | 30.0% | |
| !! | ATTGTGTGTTGATTAACAAC+AGG | - | chr3_2:26870199-26870218 | Msa0401330:intron | 30.0% |
| AAAGAATGACAGAACATGAA+AGG | - | chr3_2:26870249-26870268 | Msa0401330:intron | 30.0% | |
| AACTGTCTACATATGTTTAC+TGG | - | chr3_2:26870521-26870540 | Msa0401330:intron | 30.0% | |
| ! | ACAAGGCATTATTAAAGCTT+TGG | - | chr3_2:26870552-26870571 | Msa0401330:intron | 30.0% |
| !! | CTGTAAAACTTGTTTCTGAA+AGG | - | chr3_2:26871385-26871404 | Msa0401330:intron | 30.0% |
| ! | TATTAGTCTGAGATTATAGC+AGG | - | chr3_2:26871553-26871572 | Msa0401330:intron | 30.0% |
| GAAAGAATAAGACAGATTCA+TGG | - | chr3_2:26871731-26871750 | Msa0401330:CDS | 30.0% | |
| ! | GAAAAATTTGGGATGTATGA+TGG | - | chr3_2:26869562-26869581 | Msa0401330:CDS | 30.0% |
| !!! | GTTTTTGAGTTCAATAGAAG+AGG | - | chr3_2:26869627-26869646 | Msa0401330:CDS | 30.0% |
| ! | GTTAACGATGTTTAAAATCG+TGG | - | chr3_2:26869949-26869968 | Msa0401330:CDS | 30.0% |
| ATGGATAATCCTGTTAGTAA+TGG | + | chr3_2:26870181-26870200 | None:intergenic | 30.0% | |
| TGTTGTTAATCAACACACAA+TGG | + | chr3_2:26870200-26870219 | None:intergenic | 30.0% | |
| !! | ATTGTGTGTTGATTAACAAC+AGG | - | chr3_2:26870199-26870218 | Msa0401330:intron | 30.0% |
| AAAGAATGACAGAACATGAA+AGG | - | chr3_2:26870249-26870268 | Msa0401330:intron | 30.0% | |
| AACTGTCTACATATGTTTAC+TGG | - | chr3_2:26870521-26870540 | Msa0401330:intron | 30.0% | |
| ! | ACAAGGCATTATTAAAGCTT+TGG | - | chr3_2:26870552-26870571 | Msa0401330:intron | 30.0% |
| !! | CTGTAAAACTTGTTTCTGAA+AGG | - | chr3_2:26871385-26871404 | Msa0401330:intron | 30.0% |
| ! | TATTAGTCTGAGATTATAGC+AGG | - | chr3_2:26871553-26871572 | Msa0401330:intron | 30.0% |
| GAAAGAATAAGACAGATTCA+TGG | - | chr3_2:26871731-26871750 | Msa0401330:CDS | 30.0% | |
| !! | TGAGCTTTGTTTATGTCTCA+AGG | - | chr3_2:26869651-26869670 | Msa0401330:CDS | 35.0% |
| !! | TGTGTTGATTAACAACAGGA+GGG | - | chr3_2:26870203-26870222 | Msa0401330:intron | 35.0% |
| GACAGTTTACATCCTCTATT+TGG | + | chr3_2:26870508-26870527 | None:intergenic | 35.0% | |
| TGTCTACATATGTTTACTGG+TGG | - | chr3_2:26870524-26870543 | Msa0401330:intron | 35.0% | |
| !! | GTTTACTGGTGGATTAAACA+AGG | - | chr3_2:26870535-26870554 | Msa0401330:intron | 35.0% |
| ! | AAAAACAACCATGTCGCTTA+AGG | + | chr3_2:26870786-26870805 | None:intergenic | 35.0% |
| ! | GTTAGCTTCGATTCAATCAT+TGG | - | chr3_2:26870807-26870826 | Msa0401330:CDS | 35.0% |
| ! | ATAGGGAGAAAAGTATGGAA+TGG | - | chr3_2:26871263-26871282 | Msa0401330:intron | 35.0% |
| ! | TCTTAAGACATTGTTAGCCT+CGG | + | chr3_2:26871301-26871320 | None:intergenic | 35.0% |
| ATGTCTTAAGACGAAGACTA+AGG | - | chr3_2:26871310-26871329 | Msa0401330:intron | 35.0% | |
| ! | ATAGCTCTGTCCAATGAAAT+TGG | + | chr3_2:26871420-26871439 | None:intergenic | 35.0% |
| ! | CAGTATTAAGTTGCTCTGAT+CGG | + | chr3_2:26871445-26871464 | None:intergenic | 35.0% |
| TCAGAGCAACTTAATACTGA+AGG | - | chr3_2:26871446-26871465 | Msa0401330:intron | 35.0% | |
| !! | TGAGCTTTGTTTATGTCTCA+AGG | - | chr3_2:26869651-26869670 | Msa0401330:CDS | 35.0% |
| !! | TGTGTTGATTAACAACAGGA+GGG | - | chr3_2:26870203-26870222 | Msa0401330:intron | 35.0% |
| GACAGTTTACATCCTCTATT+TGG | + | chr3_2:26870508-26870527 | None:intergenic | 35.0% | |
| TGTCTACATATGTTTACTGG+TGG | - | chr3_2:26870524-26870543 | Msa0401330:intron | 35.0% | |
| !! | GTTTACTGGTGGATTAAACA+AGG | - | chr3_2:26870535-26870554 | Msa0401330:intron | 35.0% |
| ! | AAAAACAACCATGTCGCTTA+AGG | + | chr3_2:26870786-26870805 | None:intergenic | 35.0% |
| ! | GTTAGCTTCGATTCAATCAT+TGG | - | chr3_2:26870807-26870826 | Msa0401330:CDS | 35.0% |
| ! | ATAGGGAGAAAAGTATGGAA+TGG | - | chr3_2:26871263-26871282 | Msa0401330:intron | 35.0% |
| ! | TCTTAAGACATTGTTAGCCT+CGG | + | chr3_2:26871301-26871320 | None:intergenic | 35.0% |
| ATGTCTTAAGACGAAGACTA+AGG | - | chr3_2:26871310-26871329 | Msa0401330:intron | 35.0% | |
| ! | ATAGCTCTGTCCAATGAAAT+TGG | + | chr3_2:26871420-26871439 | None:intergenic | 35.0% |
| ! | CAGTATTAAGTTGCTCTGAT+CGG | + | chr3_2:26871445-26871464 | None:intergenic | 35.0% |
| TCAGAGCAACTTAATACTGA+AGG | - | chr3_2:26871446-26871465 | Msa0401330:intron | 35.0% | |
| GGAAGAGAAGGAGAAAAAGA+AGG | - | chr3_2:26869540-26869559 | Msa0401330:CDS | 40.0% | |
| AAATTTGGGTCTGTGACATC+AGG | - | chr3_2:26869604-26869623 | Msa0401330:CDS | 40.0% | |
| AATTTGGGTCTGTGACATCA+GGG | - | chr3_2:26869605-26869624 | Msa0401330:CDS | 40.0% | |
| !! | GTGTGTTGATTAACAACAGG+AGG | - | chr3_2:26870202-26870221 | Msa0401330:intron | 40.0% |
| !! | GTGTTGATTAACAACAGGAG+GGG | - | chr3_2:26870204-26870223 | Msa0401330:intron | 40.0% |
| ! | TGTTGATTAACAACAGGAGG+GGG | - | chr3_2:26870205-26870224 | Msa0401330:intron | 40.0% |
| ! | AGATTAGCTCGTGATTATCG+CGG | - | chr3_2:26870302-26870321 | Msa0401330:intron | 40.0% |
| TCAATCGCAACACGATATCA+AGG | - | chr3_2:26870335-26870354 | Msa0401330:intron | 40.0% | |
| AAGCTTTCAAGATCTCATCC+AGG | - | chr3_2:26870367-26870386 | Msa0401330:intron | 40.0% | |
| TTTAACCAGGAAGGAACCAT+TGG | - | chr3_2:26870454-26870473 | Msa0401330:intron | 40.0% | |
| ! | GTCCAGATTAGTCAGATTAC+CGG | - | chr3_2:26870582-26870601 | Msa0401330:intron | 40.0% |
| ! | TGTTTGAACCACGTCTTTTG+AGG | - | chr3_2:26870689-26870708 | Msa0401330:intron | 40.0% |
| ! | GATTTTCACCTTAAGCGACA+TGG | - | chr3_2:26870775-26870794 | Msa0401330:CDS | 40.0% |
| ! | CTTCGATTCAATCATTGGCT+GGG | - | chr3_2:26870812-26870831 | Msa0401330:CDS | 40.0% |
| GAATCAAAGTTGAGACCTTG+AGG | + | chr3_2:26870871-26870890 | None:intergenic | 40.0% | |
| CTAAATTAGCCCACCCAAAT+TGG | + | chr3_2:26870902-26870921 | None:intergenic | 40.0% | |
| ! | TGGTTGGTTGGAATGACATT+TGG | + | chr3_2:26871008-26871027 | None:intergenic | 40.0% |
| TTCCAACCAACCACATACAA+AGG | - | chr3_2:26871015-26871034 | Msa0401330:CDS | 40.0% | |
| ATAGAGCCTTTGTATGTGGT+TGG | + | chr3_2:26871024-26871043 | None:intergenic | 40.0% | |
| CCAAATAGAGCCTTTGTATG+TGG | + | chr3_2:26871028-26871047 | None:intergenic | 40.0% | |
| CCACATACAAAGGCTCTATT+TGG | - | chr3_2:26871025-26871044 | Msa0401330:CDS | 40.0% | |
| TCTTAAGACGAAGACTAAGG+CGG | - | chr3_2:26871313-26871332 | Msa0401330:intron | 40.0% | |
| GAGCAGACAACCAATTTCAT+TGG | - | chr3_2:26871407-26871426 | Msa0401330:intron | 40.0% | |
| AGGACCAGTTGAAATGATTC+CGG | - | chr3_2:26871573-26871592 | Msa0401330:intron | 40.0% | |
| TTCTCCGGAATCATTTCAAC+TGG | + | chr3_2:26871580-26871599 | None:intergenic | 40.0% | |
| TGAAATGATTCCGGAGAAGA+TGG | - | chr3_2:26871582-26871601 | Msa0401330:intron | 40.0% | |
| ! | AGATACACCTCTGTCTTTTG+AGG | - | chr3_2:26871702-26871721 | Msa0401330:intron | 40.0% |
| GGAAGAGAAGGAGAAAAAGA+AGG | - | chr3_2:26869540-26869559 | Msa0401330:CDS | 40.0% | |
| AAATTTGGGTCTGTGACATC+AGG | - | chr3_2:26869604-26869623 | Msa0401330:CDS | 40.0% | |
| AATTTGGGTCTGTGACATCA+GGG | - | chr3_2:26869605-26869624 | Msa0401330:CDS | 40.0% | |
| !! | GTGTGTTGATTAACAACAGG+AGG | - | chr3_2:26870202-26870221 | Msa0401330:intron | 40.0% |
| !! | GTGTTGATTAACAACAGGAG+GGG | - | chr3_2:26870204-26870223 | Msa0401330:intron | 40.0% |
| ! | TGTTGATTAACAACAGGAGG+GGG | - | chr3_2:26870205-26870224 | Msa0401330:intron | 40.0% |
| ! | AGATTAGCTCGTGATTATCG+CGG | - | chr3_2:26870302-26870321 | Msa0401330:intron | 40.0% |
| TCAATCGCAACACGATATCA+AGG | - | chr3_2:26870335-26870354 | Msa0401330:intron | 40.0% | |
| AAGCTTTCAAGATCTCATCC+AGG | - | chr3_2:26870367-26870386 | Msa0401330:intron | 40.0% | |
| TTTAACCAGGAAGGAACCAT+TGG | - | chr3_2:26870454-26870473 | Msa0401330:intron | 40.0% | |
| ! | GTCCAGATTAGTCAGATTAC+CGG | - | chr3_2:26870582-26870601 | Msa0401330:intron | 40.0% |
| ! | TGTTTGAACCACGTCTTTTG+AGG | - | chr3_2:26870689-26870708 | Msa0401330:intron | 40.0% |
| ! | GATTTTCACCTTAAGCGACA+TGG | - | chr3_2:26870775-26870794 | Msa0401330:CDS | 40.0% |
| ! | CTTCGATTCAATCATTGGCT+GGG | - | chr3_2:26870812-26870831 | Msa0401330:CDS | 40.0% |
| GAATCAAAGTTGAGACCTTG+AGG | + | chr3_2:26870871-26870890 | None:intergenic | 40.0% | |
| CTAAATTAGCCCACCCAAAT+TGG | + | chr3_2:26870902-26870921 | None:intergenic | 40.0% | |
| ! | TGGTTGGTTGGAATGACATT+TGG | + | chr3_2:26871008-26871027 | None:intergenic | 40.0% |
| TTCCAACCAACCACATACAA+AGG | - | chr3_2:26871015-26871034 | Msa0401330:CDS | 40.0% | |
| ATAGAGCCTTTGTATGTGGT+TGG | + | chr3_2:26871024-26871043 | None:intergenic | 40.0% | |
| CCAAATAGAGCCTTTGTATG+TGG | + | chr3_2:26871028-26871047 | None:intergenic | 40.0% | |
| CCACATACAAAGGCTCTATT+TGG | - | chr3_2:26871025-26871044 | Msa0401330:CDS | 40.0% | |
| TCTTAAGACGAAGACTAAGG+CGG | - | chr3_2:26871313-26871332 | Msa0401330:intron | 40.0% | |
| GAGCAGACAACCAATTTCAT+TGG | - | chr3_2:26871407-26871426 | Msa0401330:intron | 40.0% | |
| AGGACCAGTTGAAATGATTC+CGG | - | chr3_2:26871573-26871592 | Msa0401330:intron | 40.0% | |
| TTCTCCGGAATCATTTCAAC+TGG | + | chr3_2:26871580-26871599 | None:intergenic | 40.0% | |
| TGAAATGATTCCGGAGAAGA+TGG | - | chr3_2:26871582-26871601 | Msa0401330:intron | 40.0% | |
| ! | AGATACACCTCTGTCTTTTG+AGG | - | chr3_2:26871702-26871721 | Msa0401330:intron | 40.0% |
| TCGTGGTTAATTGTGTTCCG+TGG | - | chr3_2:26869966-26869985 | Msa0401330:CDS | 45.0% | |
| GCAACACGATATCAAGGCAA+AGG | - | chr3_2:26870341-26870360 | Msa0401330:intron | 45.0% | |
| GGAACCATTGGACTTCTTCA+TGG | - | chr3_2:26870466-26870485 | Msa0401330:intron | 45.0% | |
| TGCTCCATGAAGAAGTCCAA+TGG | + | chr3_2:26870473-26870492 | None:intergenic | 45.0% | |
| CACCGGTAATCTGACTAATC+TGG | + | chr3_2:26870587-26870606 | None:intergenic | 45.0% | |
| CCTTGTAACCTCAAAAGACG+TGG | + | chr3_2:26870700-26870719 | None:intergenic | 45.0% | |
| !!! | CCACGTCTTTTGAGGTTACA+AGG | - | chr3_2:26870697-26870716 | Msa0401330:intron | 45.0% |
| GCTTCGATTCAATCATTGGC+TGG | - | chr3_2:26870811-26870830 | Msa0401330:CDS | 45.0% | |
| TCAAAGTTGAGACCTTGAGG+AGG | + | chr3_2:26870868-26870887 | None:intergenic | 45.0% | |
| AGCCTTTGTATGTGGTTGGT+TGG | + | chr3_2:26871020-26871039 | None:intergenic | 45.0% | |
| AATGGTTGCAAAAATCGCCG+AGG | - | chr3_2:26871281-26871300 | Msa0401330:intron | 45.0% | |
| CCTATCTCCTCAAAAGACAG+AGG | + | chr3_2:26871712-26871731 | None:intergenic | 45.0% | |
| !! | CCTCTGTCTTTTGAGGAGAT+AGG | - | chr3_2:26871709-26871728 | Msa0401330:intron | 45.0% |
| TCGTGGTTAATTGTGTTCCG+TGG | - | chr3_2:26869966-26869985 | Msa0401330:CDS | 45.0% | |
| GCAACACGATATCAAGGCAA+AGG | - | chr3_2:26870341-26870360 | Msa0401330:intron | 45.0% | |
| GGAACCATTGGACTTCTTCA+TGG | - | chr3_2:26870466-26870485 | Msa0401330:intron | 45.0% | |
| TGCTCCATGAAGAAGTCCAA+TGG | + | chr3_2:26870473-26870492 | None:intergenic | 45.0% | |
| CACCGGTAATCTGACTAATC+TGG | + | chr3_2:26870587-26870606 | None:intergenic | 45.0% | |
| CCTTGTAACCTCAAAAGACG+TGG | + | chr3_2:26870700-26870719 | None:intergenic | 45.0% | |
| !!! | CCACGTCTTTTGAGGTTACA+AGG | - | chr3_2:26870697-26870716 | Msa0401330:intron | 45.0% |
| GCTTCGATTCAATCATTGGC+TGG | - | chr3_2:26870811-26870830 | Msa0401330:CDS | 45.0% | |
| TCAAAGTTGAGACCTTGAGG+AGG | + | chr3_2:26870868-26870887 | None:intergenic | 45.0% | |
| AGCCTTTGTATGTGGTTGGT+TGG | + | chr3_2:26871020-26871039 | None:intergenic | 45.0% | |
| AATGGTTGCAAAAATCGCCG+AGG | - | chr3_2:26871281-26871300 | Msa0401330:intron | 45.0% | |
| CCTATCTCCTCAAAAGACAG+AGG | + | chr3_2:26871712-26871731 | None:intergenic | 45.0% | |
| !! | CCTCTGTCTTTTGAGGAGAT+AGG | - | chr3_2:26871709-26871728 | Msa0401330:intron | 45.0% |
| !!! | TTTTTATAAATTTTTTTTTG+TGG | - | chr3_2:26870614-26870633 | Msa0401330:intron | 5.0% |
| !!! | TTTTTATAAATTTTTTTTTG+TGG | - | chr3_2:26870614-26870633 | Msa0401330:intron | 5.0% |
| GGAATGTGTTCGTATGCACC+TGG | + | chr3_2:26870388-26870407 | None:intergenic | 50.0% | |
| GAAGTCCAATGGTTCCTTCC+TGG | + | chr3_2:26870462-26870481 | None:intergenic | 50.0% | |
| ! | CGATTCAATCATTGGCTGGG+TGG | - | chr3_2:26870815-26870834 | Msa0401330:CDS | 50.0% |
| ! | AATCATTGGCTGGGTGGTGT+TGG | - | chr3_2:26870821-26870840 | Msa0401330:CDS | 50.0% |
| TGATTCTCCCCGTGCCAATT+TGG | - | chr3_2:26870885-26870904 | Msa0401330:intron | 50.0% | |
| GATTCTCCCCGTGCCAATTT+GGG | - | chr3_2:26870886-26870905 | Msa0401330:intron | 50.0% | |
| TTAGCCCACCCAAATTGGCA+CGG | + | chr3_2:26870897-26870916 | None:intergenic | 50.0% | |
| TTCCGGAGAAGATGGTTGAG+AGG | - | chr3_2:26871590-26871609 | Msa0401330:intron | 50.0% | |
| TGCCTCTCAACCATCTTCTC+CGG | + | chr3_2:26871595-26871614 | None:intergenic | 50.0% | |
| AGAGGCAGCTAGTGAAGCAA+GGG | - | chr3_2:26871608-26871627 | Msa0401330:intron | 50.0% | |
| GGAATGTGTTCGTATGCACC+TGG | + | chr3_2:26870388-26870407 | None:intergenic | 50.0% | |
| GAAGTCCAATGGTTCCTTCC+TGG | + | chr3_2:26870462-26870481 | None:intergenic | 50.0% | |
| ! | CGATTCAATCATTGGCTGGG+TGG | - | chr3_2:26870815-26870834 | Msa0401330:CDS | 50.0% |
| ! | AATCATTGGCTGGGTGGTGT+TGG | - | chr3_2:26870821-26870840 | Msa0401330:CDS | 50.0% |
| TGATTCTCCCCGTGCCAATT+TGG | - | chr3_2:26870885-26870904 | Msa0401330:intron | 50.0% | |
| GATTCTCCCCGTGCCAATTT+GGG | - | chr3_2:26870886-26870905 | Msa0401330:intron | 50.0% | |
| TTAGCCCACCCAAATTGGCA+CGG | + | chr3_2:26870897-26870916 | None:intergenic | 50.0% | |
| TTCCGGAGAAGATGGTTGAG+AGG | - | chr3_2:26871590-26871609 | Msa0401330:intron | 50.0% | |
| TGCCTCTCAACCATCTTCTC+CGG | + | chr3_2:26871595-26871614 | None:intergenic | 50.0% | |
| AGAGGCAGCTAGTGAAGCAA+GGG | - | chr3_2:26871608-26871627 | Msa0401330:intron | 50.0% | |
| !! | GTGGTGTTGGCTTGGGATCT+GGG | - | chr3_2:26870834-26870853 | Msa0401330:CDS | 55.0% |
| TAGCCCACCCAAATTGGCAC+GGG | + | chr3_2:26870896-26870915 | None:intergenic | 55.0% | |
| GAGAGGCAGCTAGTGAAGCA+AGG | - | chr3_2:26871607-26871626 | Msa0401330:intron | 55.0% | |
| GAGGCAGCTAGTGAAGCAAG+GGG | - | chr3_2:26871609-26871628 | Msa0401330:intron | 55.0% | |
| !! | GTGGTGTTGGCTTGGGATCT+GGG | - | chr3_2:26870834-26870853 | Msa0401330:CDS | 55.0% |
| TAGCCCACCCAAATTGGCAC+GGG | + | chr3_2:26870896-26870915 | None:intergenic | 55.0% | |
| GAGAGGCAGCTAGTGAAGCA+AGG | - | chr3_2:26871607-26871626 | Msa0401330:intron | 55.0% | |
| GAGGCAGCTAGTGAAGCAAG+GGG | - | chr3_2:26871609-26871628 | Msa0401330:intron | 55.0% | |
| !! | TTGGCTGGGTGGTGTTGGCT+TGG | - | chr3_2:26870826-26870845 | Msa0401330:CDS | 60.0% |
| !! | TGGCTGGGTGGTGTTGGCTT+GGG | - | chr3_2:26870827-26870846 | Msa0401330:CDS | 60.0% |
| !! | GGTGGTGTTGGCTTGGGATC+TGG | - | chr3_2:26870833-26870852 | Msa0401330:CDS | 60.0% |
| ! | TGGGAGTGTGCTCCTCCTCA+AGG | - | chr3_2:26870853-26870872 | Msa0401330:intron | 60.0% |
| TCTCCCCGTGCCAATTTGGG+TGG | - | chr3_2:26870889-26870908 | Msa0401330:intron | 60.0% | |
| CTCCCCGTGCCAATTTGGGT+GGG | - | chr3_2:26870890-26870909 | Msa0401330:intron | 60.0% | |
| AGCCCACCCAAATTGGCACG+GGG | + | chr3_2:26870895-26870914 | None:intergenic | 60.0% | |
| !! | TTGGCTGGGTGGTGTTGGCT+TGG | - | chr3_2:26870826-26870845 | Msa0401330:CDS | 60.0% |
| !! | TGGCTGGGTGGTGTTGGCTT+GGG | - | chr3_2:26870827-26870846 | Msa0401330:CDS | 60.0% |
| !! | GGTGGTGTTGGCTTGGGATC+TGG | - | chr3_2:26870833-26870852 | Msa0401330:CDS | 60.0% |
| ! | TGGGAGTGTGCTCCTCCTCA+AGG | - | chr3_2:26870853-26870872 | Msa0401330:intron | 60.0% |
| TCTCCCCGTGCCAATTTGGG+TGG | - | chr3_2:26870889-26870908 | Msa0401330:intron | 60.0% | |
| CTCCCCGTGCCAATTTGGGT+GGG | - | chr3_2:26870890-26870909 | Msa0401330:intron | 60.0% | |
| AGCCCACCCAAATTGGCACG+GGG | + | chr3_2:26870895-26870914 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 26869533 | 26871795 | 26869533 | ID=Msa0401330;Name=Msa0401330 |
| chr3_2 | mRNA | 26869533 | 26871795 | 26869533 | ID=Msa0401330-mRNA-1;Parent=Msa0401330;Name=Msa0401330-mRNA-1;_AED=0.04;_eAED=0.11;_QI=0|0|0|1|0.4|0.5|6|0|286 |
| chr3_2 | exon | 26871717 | 26871795 | 26871717 | ID=Msa0401330-mRNA-1:exon:5594;Parent=Msa0401330-mRNA-1 |
| chr3_2 | exon | 26871656 | 26871702 | 26871656 | ID=Msa0401330-mRNA-1:exon:5593;Parent=Msa0401330-mRNA-1 |
| chr3_2 | exon | 26870940 | 26871107 | 26870940 | ID=Msa0401330-mRNA-1:exon:5592;Parent=Msa0401330-mRNA-1 |
| chr3_2 | exon | 26870737 | 26870865 | 26870737 | ID=Msa0401330-mRNA-1:exon:5591;Parent=Msa0401330-mRNA-1 |
| chr3_2 | exon | 26869861 | 26870061 | 26869861 | ID=Msa0401330-mRNA-1:exon:5590;Parent=Msa0401330-mRNA-1 |
| chr3_2 | exon | 26869533 | 26869769 | 26869533 | ID=Msa0401330-mRNA-1:exon:5589;Parent=Msa0401330-mRNA-1 |
| chr3_2 | CDS | 26871717 | 26871795 | 26871717 | ID=Msa0401330-mRNA-1:cds;Parent=Msa0401330-mRNA-1 |
| chr3_2 | CDS | 26871656 | 26871702 | 26871656 | ID=Msa0401330-mRNA-1:cds;Parent=Msa0401330-mRNA-1 |
| chr3_2 | CDS | 26870940 | 26871107 | 26870940 | ID=Msa0401330-mRNA-1:cds;Parent=Msa0401330-mRNA-1 |
| chr3_2 | CDS | 26870737 | 26870865 | 26870737 | ID=Msa0401330-mRNA-1:cds;Parent=Msa0401330-mRNA-1 |
| chr3_2 | CDS | 26869861 | 26870061 | 26869861 | ID=Msa0401330-mRNA-1:cds;Parent=Msa0401330-mRNA-1 |
| chr3_2 | CDS | 26869533 | 26869769 | 26869533 | ID=Msa0401330-mRNA-1:cds;Parent=Msa0401330-mRNA-1 |
| Gene Sequence |
| Protein sequence |
