AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1159360

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1159360 MtrunA17_Chr7g0254411 97.059 340 5 4 1 337 1 338 0.0 667
Msa1159360 MtrunA17_Chr3g0092401 46.221 344 132 8 1 334 2 302 5.97e-87 264
Msa1159360 MtrunA17_Chr4g0060721 60.268 224 58 3 1 194 2 224 1.01e-85 261
Msa1159360 MtrunA17_Chr7g0217221 60.648 216 50 5 1 184 1 213 1.77e-82 251
Msa1159360 MtrunA17_Chr6g0453211 40.682 381 114 11 1 336 1 314 7.36e-78 241
Msa1159360 MtrunA17_Chr7g0217741 68.800 125 37 1 1 125 1 123 8.72e-61 197
Msa1159360 MtrunA17_Chr6g0453471 68.000 125 38 1 1 125 1 123 3.07e-60 197
Msa1159360 MtrunA17_Chr2g0323411 60.000 145 54 2 1 145 1 141 5.81e-59 192
Msa1159360 MtrunA17_Chr1g0203411 61.333 150 49 2 1 141 1 150 4.87e-58 189
Msa1159360 MtrunA17_Chr4g0039971 68.000 125 38 1 1 125 2 124 6.11e-58 191
Msa1159360 MtrunA17_Chr4g0042671 66.667 126 40 1 1 126 1 124 8.94e-58 192
Msa1159360 MtrunA17_Chr4g0068061 63.281 128 47 0 1 128 1 128 2.28e-57 189
Msa1159360 MtrunA17_Chr2g0281071 66.154 130 41 2 1 129 1 128 7.97e-57 187
Msa1159360 MtrunA17_Chr3g0115821 65.600 125 41 1 1 125 1 123 9.50e-57 187
Msa1159360 MtrunA17_Chr1g0187761 68.644 118 37 0 1 118 1 118 7.39e-56 182
Msa1159360 MtrunA17_Chr1g0167661 50.857 175 80 1 1 175 1 169 2.24e-55 181
Msa1159360 MtrunA17_Chr4g0048511 65.079 126 41 2 1 125 1 124 2.83e-55 184
Msa1159360 MtrunA17_Chr7g0275911 64.655 116 41 0 1 116 1 116 1.37e-54 179
Msa1159360 MtrunA17_Chr5g0410961 63.200 125 44 1 1 125 1 123 1.22e-53 179
Msa1159360 MtrunA17_Chr8g0346561 60.484 124 49 0 1 124 1 124 1.46e-53 178
Msa1159360 MtrunA17_Chr8g0349261 63.780 127 42 3 1 125 1 125 1.76e-53 177
Msa1159360 MtrunA17_Chr7g0274581 61.864 118 45 0 1 118 1 118 3.98e-53 174
Msa1159360 MtrunA17_Chr4g0037141 48.837 172 85 2 1 171 1 170 4.76e-53 176
Msa1159360 MtrunA17_Chr7g0261281 64.655 116 41 0 1 116 1 116 6.54e-53 175
Msa1159360 MtrunA17_Chr1g0167691 51.429 175 76 2 1 175 1 166 8.44e-53 174
Msa1159360 MtrunA17_Chr5g0395281 63.200 125 44 1 1 125 1 123 8.93e-53 176
Msa1159360 MtrunA17_Chr5g0434571 49.444 180 84 2 1 173 37 216 9.55e-52 175
Msa1159360 MtrunA17_Chr3g0131121 52.795 161 65 3 1 154 1 157 2.18e-51 172
Msa1159360 MtrunA17_Chr3g0110351 62.400 125 45 1 1 125 1 123 3.17e-51 172
Msa1159360 MtrunA17_Chr6g0452271 58.400 125 50 1 1 125 1 123 6.07e-51 172
Msa1159360 MtrunA17_Chr3g0121241 60.331 121 46 1 5 125 35 153 2.78e-50 169
Msa1159360 MtrunA17_Chr4g0057031 61.600 125 46 1 1 125 1 123 3.70e-50 168
Msa1159360 MtrunA17_Chr7g0228891 57.857 140 57 2 1 140 1 138 4.63e-50 168
Msa1159360 MtrunA17_Chr3g0135311 64.957 117 40 1 1 116 1 117 1.45e-49 169
Msa1159360 MtrunA17_Chr3g0103281 60.000 125 48 1 1 125 1 123 1.92e-49 168
Msa1159360 MtrunA17_Chr8g0385321 58.730 126 50 1 1 126 1 124 7.09e-49 166
Msa1159360 MtrunA17_Chr4g0070611 62.069 116 44 0 1 116 1 116 8.72e-49 166
Msa1159360 MtrunA17_Chr1g0194951 59.664 119 48 0 1 119 1 119 1.86e-48 166
Msa1159360 MtrunA17_Chr4g0070641 60.000 120 48 0 1 120 1 120 2.08e-48 160
Msa1159360 MtrunA17_Chr5g0435101 58.400 125 50 1 3 127 2 124 6.29e-48 160
Msa1159360 MtrunA17_Chr2g0311221 61.818 110 42 0 2 111 4 113 7.05e-48 164
Msa1159360 MtrunA17_Chr1g0151941 54.412 136 61 1 1 135 1 136 7.96e-48 161
Msa1159360 MtrunA17_Chr7g0264641 60.684 117 45 1 1 116 1 117 1.70e-47 161
Msa1159360 MtrunA17_Chr5g0400821 44.737 190 78 2 1 163 1 190 1.90e-47 162
Msa1159360 MtrunA17_Chr1g0152011 60.684 117 45 1 1 116 1 117 9.04e-47 161
Msa1159360 MtrunA17_Chr8g0387421 59.322 118 48 0 1 118 1 118 1.93e-46 160
Msa1159360 MtrunA17_Chr7g0269831 59.836 122 49 0 1 122 1 122 4.33e-46 160
Msa1159360 MtrunA17_Chr4g0028311 59.829 117 46 1 1 116 1 117 9.99e-46 158
Msa1159360 MtrunA17_Chr1g0193371 43.415 205 100 4 1 202 1 192 2.42e-45 158
Msa1159360 MtrunA17_Chr4g0058631 47.561 164 81 2 1 164 1 159 4.79e-45 157
Msa1159360 MtrunA17_Chr4g0022931 58.120 117 48 1 1 116 1 117 8.60e-45 154
Msa1159360 MtrunA17_Chr2g0309911 57.500 120 49 1 6 125 5 122 1.13e-44 155
Msa1159360 MtrunA17_Chr2g0327351 60.360 111 43 1 1 110 1 111 3.45e-44 154
Msa1159360 MtrunA17_Chr4g0022911 57.759 116 48 1 1 115 1 116 3.75e-44 153
Msa1159360 MtrunA17_Chr2g0330041 56.897 116 50 0 1 116 1 116 6.66e-44 155
Msa1159360 MtrunA17_Chr1g0193801 54.400 125 55 1 1 125 1 123 8.34e-44 155
Msa1159360 MtrunA17_Chr4g0022901 57.759 116 48 1 1 115 1 116 1.07e-43 151
Msa1159360 MtrunA17_Chr7g0270891 55.200 125 54 1 1 125 1 123 1.21e-43 154
Msa1159360 MtrunA17_Chr2g0323351 57.627 118 50 0 1 118 1 118 1.54e-43 150
Msa1159360 MtrunA17_Chr4g0072751 60.360 111 43 1 1 110 1 111 2.17e-43 152
Msa1159360 MtrunA17_Chr3g0117091 56.349 126 53 1 1 126 1 124 3.38e-43 152
Msa1159360 MtrunA17_Chr5g0417821 55.556 117 50 1 10 126 5 119 3.99e-43 150
Msa1159360 MtrunA17_Chr5g0397231 60.000 110 44 0 1 110 1 110 4.23e-43 152
Msa1159360 MtrunA17_Chr4g0044421 54.331 127 56 1 1 127 1 125 9.81e-43 146
Msa1159360 MtrunA17_Chr1g0211161 56.452 124 52 1 3 126 4 125 1.20e-42 147
Msa1159360 MtrunA17_Chr4g0054391 58.182 110 45 1 1 109 1 110 2.05e-42 149
Msa1159360 MtrunA17_Chr6g0487491 55.645 124 46 2 1 115 1 124 2.88e-42 147
Msa1159360 MtrunA17_Chr7g0240821 55.372 121 54 0 16 136 5 125 4.67e-42 145
Msa1159360 MtrunA17_Chr4g0032401 53.279 122 57 0 12 133 17 138 1.21e-41 147
Msa1159360 MtrunA17_Chr8g0342541 54.310 116 53 0 1 116 1 116 1.42e-41 148
Msa1159360 MtrunA17_Chr7g0271241 60.550 109 43 0 1 109 1 109 2.83e-41 148
Msa1159360 MtrunA17_Chr4g0022881 57.018 114 49 0 1 114 1 114 3.04e-41 144
Msa1159360 MtrunA17_Chr8g0342521 54.310 116 53 0 1 116 1 116 4.74e-41 146
Msa1159360 MtrunA17_Chr1g0168661 57.759 116 48 1 13 127 22 137 5.30e-41 144
Msa1159360 MtrunA17_Chr8g0343831 60.748 107 42 0 12 118 8 114 6.70e-41 143
Msa1159360 MtrunA17_Chr4g0055981 53.906 128 57 1 9 136 52 177 7.23e-41 142
Msa1159360 MtrunA17_Chr2g0328771 51.240 121 59 0 12 132 20 140 1.74e-40 144
Msa1159360 MtrunA17_Chr3g0099131 59.615 104 42 0 12 115 41 144 2.20e-40 148
Msa1159360 MtrunA17_Chr3g0088461 57.407 108 46 0 9 116 19 126 4.93e-40 144
Msa1159360 MtrunA17_Chr7g0228231 55.140 107 48 0 12 118 14 120 6.27e-40 139
Msa1159360 MtrunA17_Chr4g0022891 56.637 113 49 0 1 113 1 113 7.11e-40 140
Msa1159360 MtrunA17_Chr4g0042611 67.045 88 29 0 1 88 1 88 8.41e-40 135
Msa1159360 MtrunA17_Chr8g0354661 60.377 106 42 0 10 115 35 140 8.50e-40 147
Msa1159360 MtrunA17_Chr3g0080861 58.491 106 44 0 10 115 35 140 9.67e-40 146
Msa1159360 MtrunA17_Chr2g0322521 59.813 107 43 0 9 115 26 132 1.26e-39 144
Msa1159360 MtrunA17_Chr1g0203441 45.509 167 83 2 13 179 14 172 3.38e-39 139
Msa1159360 MtrunA17_Chr6g0450101 49.587 121 59 1 1 119 1 121 7.91e-39 137
Msa1159360 MtrunA17_Chr6g0470971 56.881 109 47 0 7 115 9 117 9.47e-39 139
Msa1159360 MtrunA17_Chr8g0342481 52.991 117 54 1 1 116 1 117 1.79e-38 141
Msa1159360 MtrunA17_Chr5g0434911 54.545 110 50 0 7 116 16 125 2.12e-38 137
Msa1159360 MtrunA17_Chr2g0327821 54.808 104 47 0 12 115 6 109 2.15e-38 136
Msa1159360 MtrunA17_Chr2g0294811 61.957 92 35 0 1 92 1 92 2.74e-38 132
Msa1159360 MtrunA17_Chr5g0434931 56.604 106 46 0 11 116 34 139 2.82e-38 137
Msa1159360 MtrunA17_Chr1g0194291 53.153 111 52 0 9 119 18 128 3.14e-38 137
Msa1159360 MtrunA17_Chr1g0186061 57.282 103 44 0 13 115 21 123 6.29e-38 135
Msa1159360 MtrunA17_Chr1g0154031 47.101 138 72 1 12 149 76 212 8.76e-38 139
Msa1159360 MtrunA17_Chr1g0194301 51.327 113 55 0 12 124 33 145 1.53e-37 135
Msa1159360 MtrunA17_Chr1g0209661 50.442 113 56 0 8 120 23 135 1.76e-37 136
Msa1159360 MtrunA17_Chr1g0180391 38.614 202 118 3 12 213 19 214 4.49e-37 133
Msa1159360 MtrunA17_Chr5g0434831 55.660 106 47 0 11 116 6 111 1.04e-36 130
Msa1159360 MtrunA17_Chr7g0220341 55.046 109 47 1 10 116 23 131 1.15e-36 133
Msa1159360 MtrunA17_Chr5g0434841 56.604 106 46 0 11 116 19 124 3.28e-36 133
Msa1159360 MtrunA17_Chr7g0228991 47.101 138 58 1 11 133 28 165 6.37e-36 131
Msa1159360 MtrunA17_Chr7g0247131 69.512 82 23 1 44 125 10 89 3.65e-35 129
Msa1159360 MtrunA17_Chr8g0360111 54.902 102 46 0 11 112 24 125 1.76e-34 127
Msa1159360 MtrunA17_Chr4g0068921 51.402 107 52 0 8 114 20 126 5.62e-34 124
Msa1159360 MtrunA17_Chr5g0441131 43.421 152 78 3 10 153 7 158 1.16e-33 122
Msa1159360 MtrunA17_Chr2g0293911 51.402 107 52 0 8 114 20 126 3.38e-33 125
Msa1159360 MtrunA17_Chr8g0334881 50.962 104 50 1 12 114 10 113 2.14e-32 123
Msa1159360 MtrunA17_Chr5g0395221 61.905 84 32 0 5 88 5 88 5.95e-32 115
Msa1159360 MtrunA17_Chr4g0013361 49.074 108 54 1 8 114 6 113 1.24e-31 120
Msa1159360 MtrunA17_Chr5g0440781 47.414 116 59 2 13 127 13 127 7.35e-31 115
Msa1159360 MtrunA17_Chr4g0030881 48.182 110 50 1 13 115 8 117 9.08e-31 117
Msa1159360 MtrunA17_Chr3g0099141 52.809 89 42 0 8 96 36 124 1.30e-30 113
Msa1159360 MtrunA17_Chr1g0192411 47.222 108 57 0 8 115 8 115 2.79e-30 119
Msa1159360 MtrunA17_Chr5g0440761 47.414 116 59 2 13 127 13 127 4.22e-30 115
Msa1159360 MtrunA17_Chr5g0441141 47.414 116 59 2 13 127 13 127 4.67e-30 115
Msa1159360 MtrunA17_Chr2g0323321 48.571 105 53 1 1 105 1 104 4.42e-29 108
Msa1159360 MtrunA17_Chr8g0342511 52.874 87 41 0 1 87 1 87 9.78e-29 107
Msa1159360 MtrunA17_Chr4g0008551 39.157 166 88 3 14 175 38 194 3.46e-28 112
Msa1159360 MtrunA17_Chr4g0053431 46.957 115 52 2 14 124 5 114 3.52e-28 110
Msa1159360 MtrunA17_Chr5g0401731 49.057 106 53 1 14 119 15 119 6.16e-28 111
Msa1159360 MtrunA17_Chr6g0454921 50.000 102 50 1 14 115 15 115 8.48e-28 107
Msa1159360 MtrunA17_Chr8g0342531 41.379 116 63 1 1 111 1 116 9.73e-28 106
Msa1159360 MtrunA17_Chr8g0342461 48.889 90 45 1 1 89 1 90 3.02e-25 99.0
Msa1159360 MtrunA17_Chr7g0229101 62.857 70 26 0 44 113 4 73 4.59e-25 100
Msa1159360 MtrunA17_Chr3g0139671 43.119 109 61 1 14 122 85 192 8.64e-25 105
Msa1159360 MtrunA17_Chr8g0342471 48.889 90 45 1 1 89 1 90 8.79e-25 97.8
Msa1159360 MtrunA17_Chr7g0238651 37.405 131 76 2 17 141 10 140 1.10e-24 102
Msa1159360 MtrunA17_Chr1g0157731 41.441 111 64 1 12 122 89 198 1.78e-24 104
Msa1159360 MtrunA17_Chr3g0133601 46.078 102 54 1 14 115 37 137 2.42e-24 99.0
Msa1159360 MtrunA17_Chr7g0229131 57.534 73 31 0 44 116 4 76 4.94e-24 96.7
Msa1159360 MtrunA17_Chr7g0238631 46.296 108 57 1 14 121 113 219 1.79e-23 101
Msa1159360 MtrunA17_Chr5g0437321 49.495 99 49 1 14 112 19 116 1.96e-23 98.2
Msa1159360 MtrunA17_Chr5g0434901 58.824 68 28 0 46 113 7 74 5.71e-22 89.7
Msa1159360 MtrunA17_Chr3g0117511 41.441 111 64 1 8 118 177 286 8.53e-22 95.5
Msa1159360 MtrunA17_Chr6g0480581 42.574 101 57 1 14 114 4 103 9.47e-22 92.4
Msa1159360 MtrunA17_Chr5g0425591 47.059 85 44 1 10 93 7 91 9.83e-22 88.2
Msa1159360 MtrunA17_Chr4g0058991 40.541 111 65 1 8 118 203 312 1.09e-20 92.4
Msa1159360 MtrunA17_Chr6g0460671 33.766 154 89 3 14 158 99 248 2.41e-20 90.5
Msa1159360 MtrunA17_Chr5g0417621 42.157 102 58 1 14 115 134 234 5.82e-20 90.1
Msa1159360 MtrunA17_Chr7g0228531 34.731 167 98 4 10 170 216 377 6.57e-20 90.1
Msa1159360 MtrunA17_Chr5g0429661 39.216 102 61 1 14 115 122 222 6.76e-20 89.4
Msa1159360 MtrunA17_Chr6g0460661 42.268 97 55 1 14 110 16 111 1.26e-19 84.7
Msa1159360 MtrunA17_Chr3g0093811 50.000 82 39 1 44 125 14 93 1.40e-19 87.0
Msa1159360 MtrunA17_Chr4g0042501 39.450 109 65 1 14 122 105 212 3.55e-19 87.8
Msa1159360 MtrunA17_Chr6g0453751 43.478 92 43 2 11 93 19 110 4.93e-19 82.0
Msa1159360 MtrunA17_Chr7g0254261 33.714 175 108 3 9 179 80 250 6.38e-19 86.7
Msa1159360 MtrunA17_Chr3g0125801 41.176 102 59 1 14 115 16 116 5.42e-18 82.8
Msa1159360 MtrunA17_Chr5g0397841 40.816 98 57 1 12 109 108 204 6.93e-18 84.3
Msa1159360 MtrunA17_Chr5g0416341 36.207 116 71 2 17 132 29 141 3.18e-17 82.4
Msa1159360 MtrunA17_Chr8g0362231 32.117 137 92 1 17 153 25 160 3.26e-17 82.0
Msa1159360 MtrunA17_Chr7g0228481 31.579 171 98 5 10 170 216 377 4.74e-16 78.6
Msa1159360 MtrunA17_Chr1g0193901 53.448 58 26 1 12 68 11 68 5.62e-16 73.2
Msa1159360 MtrunA17_Chr1g0193891 53.448 58 26 1 12 68 11 68 5.62e-16 73.2
Msa1159360 MtrunA17_Chr1g0193871 53.448 58 26 1 12 68 11 68 5.62e-16 73.2
Msa1159360 MtrunA17_Chr1g0193881 53.448 58 26 1 12 68 11 68 5.62e-16 73.2
Msa1159360 MtrunA17_Chr7g0228401 41.935 93 52 2 25 117 290 380 1.34e-15 77.4
Msa1159360 MtrunA17_Chr1g0177901 33.766 154 94 5 23 171 3 153 4.43e-15 73.2
Msa1159360 MtrunA17_Chr7g0247141 59.574 47 18 1 1 46 1 47 1.14e-14 67.8
Msa1159360 MtrunA17_Chr7g0233061 37.000 100 54 3 14 110 180 273 1.58e-12 67.8
Msa1159360 MtrunA17_Chr5g0434871 58.140 43 18 0 74 116 2 44 1.88e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1159360 AT1G08810.1 67.773 211 45 3 1 211 1 188 2.26e-95 285
Msa1159360 AT3G28910.1 56.410 234 58 3 1 190 1 234 6.12e-83 254
Msa1159360 AT3G47600.1 69.461 167 36 2 1 167 1 152 3.98e-81 250
Msa1159360 AT1G74650.1 59.174 218 53 4 1 182 1 218 7.62e-80 247
Msa1159360 AT5G62470.2 84.252 127 20 0 1 127 1 127 2.41e-79 246
Msa1159360 AT5G62470.1 84.252 127 19 1 1 127 1 126 1.12e-77 242
Msa1159360 AT3G01140.2 68.800 125 37 1 1 125 1 123 4.71e-60 196
Msa1159360 AT5G15310.4 68.000 125 38 1 1 125 1 123 1.04e-59 192
Msa1159360 AT5G15310.1 68.000 125 38 1 1 125 1 123 2.22e-59 194
Msa1159360 AT5G15310.2 68.000 125 38 1 1 125 1 123 2.56e-59 193
Msa1159360 AT4G21440.1 67.200 125 39 1 1 125 1 123 1.11e-57 190
Msa1159360 AT3G61250.1 66.400 125 40 1 1 125 1 123 1.45e-57 188
Msa1159360 AT3G01140.1 68.595 121 36 1 5 125 48 166 4.45e-57 190
Msa1159360 AT3G23250.1 52.514 179 85 0 1 179 1 179 4.66e-57 187
Msa1159360 AT4G28110.1 64.800 125 42 1 1 125 1 123 6.17e-57 186
Msa1159360 AT1G35515.1 44.762 210 101 4 1 209 1 196 6.49e-57 184
Msa1159360 AT2G31180.1 67.797 118 38 0 1 118 1 118 9.49e-57 185
Msa1159360 AT1G06180.1 63.636 132 48 0 1 132 1 132 9.88e-57 184
Msa1159360 AT3G02940.2 64.800 125 42 1 1 125 1 123 1.21e-56 186
Msa1159360 AT3G02940.1 64.800 125 42 1 1 125 1 123 2.88e-56 186
Msa1159360 AT3G02940.3 64.800 125 42 1 1 125 1 123 2.88e-56 186
Msa1159360 AT4G05100.1 65.385 130 42 2 1 129 1 128 5.44e-56 185
Msa1159360 AT5G16770.4 65.600 125 41 1 1 125 1 123 5.78e-56 185
Msa1159360 AT5G16770.3 65.600 125 41 1 1 125 1 123 5.78e-56 185
Msa1159360 AT5G16770.1 56.688 157 65 2 1 156 1 155 1.86e-55 184
Msa1159360 AT5G16770.2 56.688 157 65 2 1 156 1 155 1.86e-55 184
Msa1159360 AT1G34670.1 59.420 138 54 1 1 138 1 136 6.98e-54 181
Msa1159360 AT1G79180.1 50.877 171 77 2 2 171 4 168 9.91e-54 178
Msa1159360 AT5G54230.1 44.177 249 119 5 1 249 1 229 4.08e-53 177
Msa1159360 AT1G22640.1 62.400 125 45 1 1 125 1 123 5.01e-53 175
Msa1159360 AT1G66230.1 43.602 211 106 3 1 211 1 198 5.85e-53 176
Msa1159360 AT5G60890.1 65.254 118 41 0 1 118 1 118 7.95e-53 176
Msa1159360 AT2G47460.1 56.835 139 60 0 1 139 1 139 9.04e-53 178
Msa1159360 AT4G09460.1 48.603 179 84 2 1 173 1 177 1.37e-52 174
Msa1159360 AT1G56160.1 63.478 115 42 0 2 116 4 118 1.76e-52 175
Msa1159360 AT2G16720.1 56.291 151 59 2 1 146 1 149 2.53e-52 174
Msa1159360 AT5G49330.1 60.656 122 48 0 1 122 1 122 2.64e-52 176
Msa1159360 AT3G62610.1 64.706 119 42 0 1 119 1 119 2.80e-52 176
Msa1159360 AT5G10280.1 61.600 125 46 1 1 125 1 123 5.33e-52 175
Msa1159360 AT4G34990.1 61.905 126 46 1 1 126 1 124 5.37e-52 173
Msa1159360 AT5G61420.2 61.600 125 46 1 1 125 1 123 5.47e-52 176
Msa1159360 AT4G38620.1 60.630 127 48 1 1 127 1 125 2.25e-51 172
Msa1159360 AT4G17785.2 38.989 277 137 8 1 274 1 248 2.28e-51 174
Msa1159360 AT4G17785.1 38.989 277 137 8 1 274 1 248 2.47e-51 174
Msa1159360 AT5G56110.1 55.396 139 60 1 1 139 1 137 3.26e-51 172
Msa1159360 AT5G07690.1 61.600 125 46 1 1 125 1 123 3.57e-51 173
Msa1159360 AT1G18570.1 64.286 126 42 2 1 125 1 124 6.75e-51 173
Msa1159360 AT4G12350.1 47.594 187 88 3 1 179 1 185 1.56e-50 170
Msa1159360 AT3G13540.1 60.331 121 46 1 5 125 16 134 1.81e-50 169
Msa1159360 AT1G74080.1 60.800 125 47 1 1 125 1 123 2.42e-50 171
Msa1159360 AT5G65230.1 60.800 125 47 1 1 125 1 123 6.00e-50 169
Msa1159360 AT5G16600.1 60.000 125 48 1 1 125 1 123 8.68e-49 166
Msa1159360 AT1G74430.1 59.259 135 53 1 1 135 1 133 1.17e-48 164
Msa1159360 AT1G16490.1 60.000 115 46 0 2 116 4 118 1.18e-48 164
Msa1159360 AT4G22680.1 50.920 163 72 2 1 155 1 163 1.62e-48 164
Msa1159360 AT5G07700.1 59.200 125 49 1 1 125 1 123 1.78e-48 166
Msa1159360 AT5G07700.2 59.200 125 49 1 1 125 1 123 1.78e-48 166
Msa1159360 AT4G37780.1 56.923 130 50 2 1 124 1 130 3.93e-48 164
Msa1159360 AT1G79180.2 42.647 204 77 3 2 171 4 201 2.31e-47 163
Msa1159360 AT1G09540.1 47.977 173 82 3 1 173 1 165 3.11e-47 164
Msa1159360 AT3G49690.1 61.538 117 44 1 1 116 1 117 6.44e-47 161
Msa1159360 AT5G57620.1 59.829 117 46 1 1 116 1 117 1.47e-46 161
Msa1159360 AT5G14340.1 57.143 126 52 1 1 126 13 136 2.54e-46 159
Msa1159360 AT3G12820.1 62.069 116 44 0 3 118 5 120 2.59e-46 157
Msa1159360 AT1G18710.1 57.600 125 51 1 1 125 1 123 3.55e-46 158
Msa1159360 AT5G62320.1 56.061 132 49 2 2 126 3 132 3.75e-46 157
Msa1159360 AT1G63910.1 58.333 120 50 0 1 120 1 120 6.75e-46 160
Msa1159360 AT4G01680.3 49.020 153 76 1 1 153 1 151 1.14e-45 156
Msa1159360 AT5G23000.1 58.974 117 47 1 1 116 1 117 1.20e-45 158
Msa1159360 AT5G26660.1 57.143 126 52 1 1 126 1 124 1.50e-45 159
Msa1159360 AT5G65790.1 59.829 117 46 1 1 116 1 117 1.90e-45 159
Msa1159360 AT3G30210.1 47.953 171 67 3 11 168 26 187 5.34e-45 155
Msa1159360 AT2G36890.1 58.974 117 47 1 1 116 1 117 6.12e-45 155
Msa1159360 AT3G47600.2 62.602 123 31 2 45 167 39 146 6.66e-45 156
Msa1159360 AT3G13890.2 56.897 116 50 0 1 116 1 116 8.22e-45 157
Msa1159360 AT2G36890.2 58.974 117 47 1 1 116 42 158 9.66e-45 156
Msa1159360 AT4G01680.1 49.020 153 76 1 1 153 1 151 1.16e-44 156
Msa1159360 AT1G57560.1 55.200 125 54 1 1 125 1 123 6.69e-44 153
Msa1159360 AT5G14750.1 62.500 104 39 0 13 116 17 120 9.42e-44 149
Msa1159360 AT1G57560.2 55.200 125 54 1 1 125 1 123 9.98e-44 152
Msa1159360 AT2G32460.1 41.818 220 115 3 8 216 14 231 1.02e-43 157
Msa1159360 AT2G32460.2 41.935 217 113 3 11 216 5 219 1.78e-43 156
Msa1159360 AT3G28470.1 56.364 110 48 0 1 110 1 110 7.43e-43 150
Msa1159360 AT5G52600.1 47.945 146 76 0 12 157 12 157 1.82e-42 146
Msa1159360 AT5G40330.1 61.538 104 40 0 13 116 13 116 2.60e-42 146
Msa1159360 AT5G55020.1 62.385 109 41 0 10 118 24 132 6.18e-42 153
Msa1159360 AT3G13890.1 52.800 125 50 1 1 116 1 125 8.58e-42 149
Msa1159360 AT3G12720.1 55.372 121 52 1 6 126 16 134 8.62e-42 147
Msa1159360 AT4G01680.2 45.455 165 76 2 1 153 1 163 3.35e-41 147
Msa1159360 AT3G27920.1 60.577 104 41 0 13 116 15 118 3.55e-41 144
Msa1159360 AT5G35550.1 45.055 182 84 4 12 178 14 194 4.99e-41 144
Msa1159360 AT4G26930.1 60.000 105 42 0 10 114 17 121 1.02e-40 147
Msa1159360 AT3G24310.1 55.738 122 48 1 11 132 17 132 1.24e-40 144
Msa1159360 AT5G12870.1 56.481 108 47 0 12 119 18 125 8.25e-40 142
Msa1159360 AT2G26960.1 60.377 106 42 0 9 114 17 122 9.93e-40 145
Msa1159360 AT4G13480.1 60.194 103 41 0 13 115 7 109 1.19e-39 140
Msa1159360 AT1G66370.1 55.652 115 47 1 1 115 1 111 2.71e-39 139
Msa1159360 AT3G11440.2 56.731 104 45 0 12 115 41 144 2.86e-39 144
Msa1159360 AT3G27810.1 53.271 107 50 0 12 118 20 126 3.87e-39 138
Msa1159360 AT3G01530.1 54.128 109 50 0 8 116 21 129 4.58e-39 137
Msa1159360 AT3G08500.1 55.556 108 48 0 9 116 27 134 6.19e-39 141
Msa1159360 AT5G40350.1 54.206 107 49 0 12 118 17 123 8.65e-39 137
Msa1159360 AT3G11440.3 56.731 104 45 0 12 115 41 144 1.22e-38 144
Msa1159360 AT3G11440.4 56.731 104 45 0 12 115 41 144 1.22e-38 144
Msa1159360 AT3G11440.1 56.731 104 45 0 12 115 41 144 1.22e-38 144
Msa1159360 AT5G06100.1 55.238 105 47 0 11 115 31 135 3.30e-38 141
Msa1159360 AT1G25340.1 49.206 126 61 1 13 138 19 141 6.20e-38 137
Msa1159360 AT5G06100.5 55.238 105 47 0 11 115 31 135 1.01e-37 141
Msa1159360 AT5G06100.2 55.238 105 47 0 11 115 31 135 1.01e-37 141
Msa1159360 AT5G06100.3 55.238 105 47 0 11 115 31 135 1.01e-37 141
Msa1159360 AT5G06100.4 55.238 105 47 0 11 115 31 135 1.01e-37 141
Msa1159360 AT2G47190.1 53.704 108 50 0 8 115 16 123 1.04e-37 136
Msa1159360 AT5G59780.3 50.877 114 56 0 13 126 9 122 1.62e-37 134
Msa1159360 AT3G46130.1 50.000 116 58 0 11 126 8 123 1.84e-37 135
Msa1159360 AT1G68320.1 40.506 158 80 1 12 169 19 162 2.77e-36 132
Msa1159360 AT1G48000.1 48.387 124 59 1 10 133 30 148 4.82e-36 130
Msa1159360 AT3G48920.1 54.902 102 46 0 13 114 19 120 7.73e-36 130
Msa1159360 AT4G25560.1 54.464 112 51 0 13 124 11 122 1.91e-35 130
Msa1159360 AT5G52260.1 56.757 111 48 0 13 123 13 123 2.73e-35 129
Msa1159360 AT1G66380.1 57.143 105 45 0 11 115 7 111 1.52e-34 124
Msa1159360 AT1G25340.2 47.619 126 58 2 13 138 19 136 2.84e-34 127
Msa1159360 AT1G25340.3 47.619 126 58 2 13 138 19 136 3.72e-34 127
Msa1159360 AT1G56650.1 56.190 105 46 0 11 115 7 111 3.49e-33 123
Msa1159360 AT3G60460.1 47.826 115 59 1 7 120 6 120 5.64e-33 124
Msa1159360 AT1G66390.1 56.190 105 46 0 11 115 7 111 6.63e-33 122
Msa1159360 AT5G49620.1 51.402 107 52 0 8 114 22 128 4.01e-32 122
Msa1159360 AT3G53200.1 52.885 104 49 0 12 115 9 112 8.63e-32 119
Msa1159360 AT3G06490.1 51.402 107 52 0 8 114 15 121 1.16e-31 121
Msa1159360 AT3G12820.2 71.831 71 20 0 48 118 2 72 1.02e-29 112
Msa1159360 AT5G14750.3 68.116 69 22 0 48 116 18 86 6.60e-29 110
Msa1159360 AT5G49620.2 45.455 121 52 1 8 114 22 142 1.22e-28 113
Msa1159360 AT5G35550.2 44.966 149 66 4 45 178 50 197 1.79e-28 111
Msa1159360 AT5G26660.2 60.976 82 30 1 45 126 14 93 1.83e-28 112
Msa1159360 AT2G26950.1 47.573 103 54 0 9 111 13 115 1.07e-27 112
Msa1159360 AT2G39880.1 50.943 106 43 2 14 115 50 150 1.21e-27 111
Msa1159360 AT3G46130.3 52.809 89 42 0 38 126 3 91 2.77e-27 107
Msa1159360 AT2G23290.1 50.943 106 43 2 14 115 13 113 3.18e-27 109
Msa1159360 AT5G59780.2 54.878 82 37 0 45 126 20 101 7.44e-27 105
Msa1159360 AT3G46130.4 54.878 82 37 0 45 126 20 101 1.62e-26 105
Msa1159360 AT4G32730.1 29.682 283 168 9 12 275 85 355 5.12e-26 109
Msa1159360 AT4G32730.5 29.682 283 168 9 12 275 85 355 7.86e-26 108
Msa1159360 AT4G32730.4 29.682 283 168 9 12 275 85 355 7.86e-26 108
Msa1159360 AT4G32730.3 29.682 283 168 9 12 275 85 355 7.86e-26 108
Msa1159360 AT4G32730.2 29.682 283 168 9 12 275 85 355 7.86e-26 108
Msa1159360 AT3G09230.1 40.714 140 72 3 14 149 55 187 8.19e-26 107
Msa1159360 AT5G02320.3 38.158 152 93 1 14 165 67 217 1.85e-25 107
Msa1159360 AT3G55730.1 49.057 106 45 2 14 115 56 156 2.18e-25 105
Msa1159360 AT4G37260.1 48.113 106 46 2 14 115 13 113 2.29e-25 104
Msa1159360 AT5G02320.1 38.158 152 93 1 14 165 127 277 2.76e-25 106
Msa1159360 AT5G02320.2 38.158 152 93 1 14 165 127 277 2.76e-25 106
Msa1159360 AT5G40350.2 56.579 76 33 0 43 118 3 78 4.91e-25 99.8
Msa1159360 AT3G27810.2 55.405 74 33 0 45 118 4 77 5.97e-25 99.8
Msa1159360 AT3G53200.2 58.442 77 32 0 39 115 3 79 2.44e-24 99.0
Msa1159360 AT3G50060.1 46.078 102 54 1 14 115 6 106 5.06e-24 100
Msa1159360 AT5G67300.1 45.614 114 60 2 14 126 6 118 1.14e-23 99.4
Msa1159360 AT5G11510.2 40.541 111 65 1 12 122 79 188 1.17e-23 102
Msa1159360 AT5G11510.2 33.019 106 69 2 14 118 29 133 2.12e-11 65.5
Msa1159360 AT5G11510.5 40.541 111 65 1 12 122 79 188 1.21e-23 102
Msa1159360 AT5G11510.5 33.019 106 69 2 14 118 29 133 2.04e-11 65.5
Msa1159360 AT5G11510.3 40.541 111 65 1 12 122 79 188 1.24e-23 102
Msa1159360 AT5G11510.3 33.019 106 69 2 14 118 29 133 2.67e-11 65.5
Msa1159360 AT5G11510.1 40.541 111 65 1 12 122 79 188 1.24e-23 102
Msa1159360 AT5G11510.1 33.019 106 69 2 14 118 29 133 2.67e-11 65.5
Msa1159360 AT5G11510.4 40.541 111 65 1 12 122 79 188 1.24e-23 102
Msa1159360 AT5G11510.4 33.019 106 69 2 14 118 29 133 2.67e-11 65.5
Msa1159360 AT1G08810.3 54.902 102 25 3 88 189 5 85 1.82e-23 96.3
Msa1159360 AT1G08810.2 54.902 102 25 3 88 189 5 85 1.82e-23 96.3
Msa1159360 AT1G66380.3 62.500 72 27 0 44 115 7 78 5.60e-23 92.4
Msa1159360 AT5G40360.1 33.125 160 95 4 12 167 156 307 7.60e-23 98.2
Msa1159360 AT1G74650.3 44.366 142 43 4 77 182 1 142 2.34e-22 94.7
Msa1159360 AT1G22640.3 62.687 67 23 1 59 125 2 66 2.66e-22 93.2
Msa1159360 AT1G69560.1 40.909 110 64 1 9 118 102 210 3.21e-22 95.9
Msa1159360 AT1G69560.2 40.909 110 64 1 9 118 118 226 5.00e-22 95.5
Msa1159360 AT3G27785.1 36.986 146 85 3 8 147 183 327 5.96e-22 96.3
Msa1159360 AT3G09370.2 46.078 102 54 1 14 115 135 235 1.23e-21 95.9
Msa1159360 AT3G09370.1 46.078 102 54 1 14 115 130 230 1.25e-21 95.9
Msa1159360 AT3G09370.3 46.078 102 54 1 14 115 143 243 1.47e-21 95.9
Msa1159360 AT3G23250.2 62.500 64 24 0 59 122 2 65 1.62e-21 92.0
Msa1159360 AT2G37630.1 29.268 164 111 2 17 175 7 170 2.04e-21 94.0
Msa1159360 AT1G26780.1 40.541 111 65 1 12 122 96 205 2.32e-21 92.4
Msa1159360 AT3G28910.2 82.692 52 5 1 77 124 1 52 2.56e-21 91.7
Msa1159360 AT1G26780.2 40.541 111 65 1 12 122 96 205 4.31e-21 93.2
Msa1159360 AT1G66380.2 46.939 98 51 1 11 107 7 104 6.02e-21 87.0
Msa1159360 AT4G18770.1 38.739 111 67 1 8 118 211 320 6.83e-21 93.2
Msa1159360 AT5G14750.4 65.517 58 20 0 59 116 2 59 8.31e-21 87.4
Msa1159360 AT5G14750.2 65.517 58 20 0 59 116 2 59 8.31e-21 87.4
Msa1159360 AT1G71030.2 47.191 89 42 2 51 136 5 91 1.12e-20 88.2
Msa1159360 AT5G58850.1 40.000 105 62 1 14 118 105 208 1.51e-20 92.4
Msa1159360 AT1G71030.1 47.191 89 42 2 51 136 19 105 1.73e-20 88.2
Msa1159360 AT1G18960.1 40.952 105 59 2 14 118 10 111 2.96e-20 90.1
Msa1159360 AT1G17950.1 39.216 102 61 1 14 115 5 105 5.90e-20 88.2
Msa1159360 AT5G11050.1 38.462 104 63 1 12 115 103 205 9.65e-20 89.7
Msa1159360 AT4G33450.1 36.879 141 86 2 8 146 13 152 1.01e-19 87.4
Msa1159360 AT5G17800.1 41.176 102 59 1 14 115 93 193 1.26e-19 88.6
Msa1159360 AT2G25230.1 39.831 118 70 1 8 125 20 136 7.02e-19 84.7
Msa1159360 AT2G02820.3 36.937 111 67 2 17 127 33 140 2.88e-18 84.7
Msa1159360 AT1G73410.1 39.216 102 61 1 14 115 6 106 3.39e-18 83.2
Msa1159360 AT1G14350.2 36.441 118 73 2 17 134 28 143 6.36e-18 84.7
Msa1159360 AT1G14350.1 36.441 118 73 2 17 134 28 143 6.36e-18 84.7
Msa1159360 AT1G73410.2 39.216 102 61 1 14 115 6 106 6.73e-18 81.3
Msa1159360 AT3G29020.1 37.143 105 65 1 14 118 65 168 7.31e-18 82.0
Msa1159360 AT4G00540.2 38.261 115 67 2 12 123 101 214 9.40e-18 84.0
Msa1159360 AT5G39700.1 35.484 124 79 1 15 138 57 179 9.85e-18 80.5
Msa1159360 AT2G02820.1 36.937 111 67 2 17 127 33 140 9.98e-18 84.3
Msa1159360 AT4G00540.1 38.261 115 67 2 12 123 99 212 1.43e-17 83.6
Msa1159360 AT3G29020.2 37.143 105 65 1 14 118 67 170 1.61e-17 82.0
Msa1159360 AT2G02820.2 36.937 111 67 2 17 127 33 140 1.77e-17 83.6
Msa1159360 AT5G40430.1 34.821 112 71 2 7 118 47 156 1.10e-14 73.2
Msa1159360 AT1G74650.2 39.552 134 45 4 85 182 4 137 1.99e-14 72.4
Msa1159360 AT5G59780.1 47.368 57 30 0 70 126 1 57 1.18e-12 65.9
Msa1159360 AT3G46130.2 47.368 57 30 0 70 126 1 57 2.01e-12 65.5
Msa1159360 AT5G61420.1 62.222 45 15 1 81 125 2 44 4.18e-11 63.2
Msa1159360 AT4G25560.2 54.902 51 23 0 74 124 6 56 7.40e-11 61.6

Find 72 sgRNAs with CRISPR-Local

Find 198 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCCTTTGATTTGTGAATT+TGG 0.199005 7_4:+48977827 None:intergenic
ATCAAATAAACCCTTAAGTT+TGG 0.212983 7_4:-48977352 Msa1159360:three_prime_UTR
AATAATGAGTTTGAAAATAA+TGG 0.215629 7_4:-48977749 Msa1159360:CDS
ATTTCTTGAGAAATGGTTAT+TGG 0.262736 7_4:-48977447 Msa1159360:CDS
AATTTCCTGGACCATGTTCT+TGG 0.271323 7_4:+48978843 None:intergenic
ATTCATTTGCAAGCTCTTCT+TGG 0.274251 7_4:-48978401 Msa1159360:CDS
ATAATGATATAAAGAATTAT+TGG 0.287254 7_4:-48978084 Msa1159360:CDS
AAGAACATGGTCCAGGAAAT+TGG 0.293284 7_4:-48978841 Msa1159360:CDS
TATTGTATTCATTACTATAT+AGG 0.299916 7_4:+48977069 None:intergenic
AAGTTTCCTCTCTTGATTCC+TGG 0.303513 7_4:+48978449 None:intergenic
GTTGTTGATGTTGAGTTTGA+TGG 0.311785 7_4:+48978013 None:intergenic
TCCATGACATCCCAAACTTA+AGG 0.327303 7_4:+48977341 None:intergenic
GCAAAAGTTGCAGGCTTAGA+TGG 0.333849 7_4:-48978487 Msa1159360:CDS
TCAAATAAACCCTTAAGTTT+GGG 0.336396 7_4:-48977351 Msa1159360:three_prime_UTR
CCATGACATCCCAAACTTAA+GGG 0.344710 7_4:+48977342 None:intergenic
CTTTGTCATTTCTTGAGAAA+TGG 0.355094 7_4:-48977454 Msa1159360:CDS
GTTGAGGAATCTTAGAAGTT+AGG 0.359158 7_4:-48977218 Msa1159360:three_prime_UTR
CTCTCTTGATTCCTGGCCTC+AGG 0.360817 7_4:+48978456 None:intergenic
CAAGGTGCAGCAAAAGTTGC+AGG 0.373160 7_4:-48978496 Msa1159360:CDS
ATCAAAGGAAATTATCAATA+TGG 0.380001 7_4:-48977815 Msa1159360:CDS
GGAACTGTTCTCCAATTTCC+TGG 0.384426 7_4:+48978830 None:intergenic
TGGAAATTATTCAAATGATA+TGG 0.389775 7_4:-48977322 Msa1159360:three_prime_UTR
ATAATGAGTTTGAAAATAAT+GGG 0.390834 7_4:-48977748 Msa1159360:CDS
ATCTTGTAATAATTCACCTT+TGG 0.395893 7_4:+48977649 None:intergenic
TGAGAATATTTCAAGGCTCT+TGG 0.400491 7_4:-48977870 Msa1159360:CDS
AGGCAAAGATTGAGAGAGAA+AGG 0.407557 7_4:+48979024 None:intergenic
ATTTCAAGGTTTAAATCAGC+TGG 0.419722 7_4:+48977698 None:intergenic
TTGTAATAATTCACCTTTGG+TGG 0.425153 7_4:+48977652 None:intergenic
TCTTAACAATGGTGCTGCTT+GGG 0.425880 7_4:-48977576 Msa1159360:CDS
GATGATGATGATGGATTTCA+AGG 0.431161 7_4:+48977684 None:intergenic
TTTCAAGGCTCTTGGAAGGT+TGG 0.431717 7_4:-48977862 Msa1159360:CDS
ACAAGGATGATATCTTCTTC+AGG 0.437099 7_4:+48978875 None:intergenic
ATATCATTATCTGTTCTTTG+AGG 0.437222 7_4:+48978097 None:intergenic
TGATTCTATACCTCATGAAA+AGG 0.440644 7_4:-48977540 Msa1159360:CDS
ATCTTAACAATGGTGCTGCT+TGG 0.440647 7_4:-48977577 Msa1159360:CDS
CCCTTAAGTTTGGGATGTCA+TGG 0.446799 7_4:-48977342 Msa1159360:three_prime_UTR
ACTTCTGTCACTAAAACTCT+TGG 0.456896 7_4:+48977982 None:intergenic
ATATATTTACCTGTATTAGT+AGG 0.465767 7_4:+48978809 None:intergenic
CAAGCACTGAGAATATTTCA+AGG 0.465798 7_4:-48977877 Msa1159360:CDS
ATTCTCTGATTATAAGACTA+GGG 0.474205 7_4:-48977262 Msa1159360:three_prime_UTR
ATTCTCAGTGCTTGAAGCAT+AGG 0.476717 7_4:+48977886 None:intergenic
TTGAGGAAGGTATGAAGCTA+TGG 0.483264 7_4:+48978114 None:intergenic
TACATCCAAGAACATGGTCC+AGG 0.493294 7_4:-48978848 Msa1159360:CDS
GATTCTATACCTCATGAAAA+GGG 0.499514 7_4:-48977539 Msa1159360:CDS
CATTATCTGTTCTTTGAGGA+AGG 0.507113 7_4:+48978101 None:intergenic
AGAACAGTTCCTACTAATAC+AGG 0.508425 7_4:-48978818 Msa1159360:intron
AACTTCACTCCTCACGAAGA+AGG 0.515742 7_4:-48978431 Msa1159360:CDS
TGGTCATGTGGAGGAAATGA+TGG 0.517500 7_4:-48977414 Msa1159360:CDS
ATATCTTCTTCAGGTGTCCA+TGG 0.519218 7_4:+48978884 None:intergenic
TTTCTTGCAAGTTAGAACAT+TGG 0.532669 7_4:+48977383 None:intergenic
AATTCTCTGATTATAAGACT+AGG 0.534470 7_4:-48977263 Msa1159360:three_prime_UTR
TGGACAAATTACCTGAGGCC+AGG 0.537219 7_4:-48978467 Msa1159360:CDS
TGGTTATTGGATGAAAATGT+TGG 0.542744 7_4:-48977434 Msa1159360:CDS
AATATTTCAAGGCTCTTGGA+AGG 0.554523 7_4:-48977866 Msa1159360:CDS
GTTTCTTACATCCAAGAACA+TGG 0.560878 7_4:-48978854 Msa1159360:CDS
TCAAGAAATGACAAAGGAGG+AGG 0.572364 7_4:+48977461 None:intergenic
TCACCAAATTCACAAATCAA+AGG 0.573898 7_4:-48977830 Msa1159360:CDS
AAAGGTGAATTATTACAAGA+TGG 0.575052 7_4:-48977647 Msa1159360:CDS
ATAAGCTAAATTAGTGCATG+TGG 0.577636 7_4:-48977135 Msa1159360:three_prime_UTR
CATCACAAAATTACCACCAA+AGG 0.585996 7_4:-48977665 Msa1159360:CDS
GGTGAATTATTACAAGATGG+TGG 0.593963 7_4:-48977644 Msa1159360:CDS
TCATTTGAGAATCTTAACAA+TGG 0.601738 7_4:-48977587 Msa1159360:CDS
ACAACAAGGAGGTCTTCCCA+TGG 0.602083 7_4:+48978931 None:intergenic
TAGGCATCAAGAAAGGTCCA+TGG 0.613785 7_4:-48978901 Msa1159360:CDS
ATAATCATTCCTTCTTCGTG+AGG 0.620319 7_4:+48978422 None:intergenic
TTCTCAAGAAATGACAAAGG+AGG 0.634582 7_4:+48977458 None:intergenic
GGATGAAAATGTTGGTCATG+TGG 0.647965 7_4:-48977426 Msa1159360:CDS
CTGAGGCCAGGAATCAAGAG+AGG 0.658257 7_4:-48978455 Msa1159360:CDS
GTTCTTGGATGTAAGAAACA+AGG 0.658522 7_4:+48978858 None:intergenic
TGAAAATGTTGGTCATGTGG+AGG 0.708741 7_4:-48977423 Msa1159360:CDS
CATTTCTCAAGAAATGACAA+AGG 0.708797 7_4:+48977455 None:intergenic
TTAGATGGACAAATTACCTG+AGG 0.711666 7_4:-48978472 Msa1159360:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTGATATATAATTAAATTGT+TGG - chr7_4:48977560-48977579 Msa1159360:CDS 10.0%
!! ATCAAAATTAATATAAAACA+AGG + chr7_4:48977863-48977882 None:intergenic 10.0%
!! ATAATGATATAAAGAATTAT+TGG - chr7_4:48978010-48978029 Msa1159360:CDS 10.0%
!!! GTTTAATTTTTATATTACAT+GGG - chr7_4:48978854-48978873 Msa1159360:CDS 10.0%
!! TTGATATATAATTAAATTGT+TGG - chr7_4:48977560-48977579 Msa1159360:CDS 10.0%
!! ATCAAAATTAATATAAAACA+AGG + chr7_4:48977863-48977882 None:intergenic 10.0%
!! ATAATGATATAAAGAATTAT+TGG - chr7_4:48978010-48978029 Msa1159360:CDS 10.0%
!!! GTTTAATTTTTATATTACAT+GGG - chr7_4:48978854-48978873 Msa1159360:CDS 10.0%
!! ATTAAATTGTTGGATAAAAA+AGG - chr7_4:48977570-48977589 Msa1159360:CDS 15.0%
!! TTAAATTGTTGGATAAAAAA+GGG - chr7_4:48977571-48977590 Msa1159360:CDS 15.0%
!! AATAATGAGTTTGAAAATAA+TGG - chr7_4:48978345-48978364 Msa1159360:intron 15.0%
!! ATAATGAGTTTGAAAATAAT+GGG - chr7_4:48978346-48978365 Msa1159360:intron 15.0%
!!! GGTTTAATTTTTATATTACA+TGG - chr7_4:48978853-48978872 Msa1159360:CDS 15.0%
!! TATTGTATTCATTACTATAT+AGG + chr7_4:48979028-48979047 None:intergenic 15.0%
!! ATTAAATTGTTGGATAAAAA+AGG - chr7_4:48977570-48977589 Msa1159360:CDS 15.0%
!! TTAAATTGTTGGATAAAAAA+GGG - chr7_4:48977571-48977590 Msa1159360:CDS 15.0%
!! AATAATGAGTTTGAAAATAA+TGG - chr7_4:48978345-48978364 Msa1159360:intron 15.0%
!! ATAATGAGTTTGAAAATAAT+GGG - chr7_4:48978346-48978365 Msa1159360:intron 15.0%
!!! GGTTTAATTTTTATATTACA+TGG - chr7_4:48978853-48978872 Msa1159360:CDS 15.0%
!! TATTGTATTCATTACTATAT+AGG + chr7_4:48979028-48979047 None:intergenic 15.0%
!!! TCACTCTTTTATTTTTCTTT+AGG + chr7_4:48977093-48977112 None:intergenic 20.0%
!! ATATATTTACCTGTATTAGT+AGG + chr7_4:48977288-48977307 None:intergenic 20.0%
!! ATCTAGTGCTTAATATATTT+AGG - chr7_4:48977444-48977463 Msa1159360:CDS 20.0%
!! CACTCAAAAACAAAATAAAA+TGG - chr7_4:48977755-48977774 Msa1159360:CDS 20.0%
!!! GTTTAATTTCATCATTATCA+TGG + chr7_4:48977804-48977823 None:intergenic 20.0%
!! ATCAAAGGAAATTATCAATA+TGG - chr7_4:48978279-48978298 Msa1159360:intron 20.0%
!! TGGAAATTATTCAAATGATA+TGG - chr7_4:48978772-48978791 Msa1159360:intron 20.0%
!!! TCACTCTTTTATTTTTCTTT+AGG + chr7_4:48977093-48977112 None:intergenic 20.0%
!! ATATATTTACCTGTATTAGT+AGG + chr7_4:48977288-48977307 None:intergenic 20.0%
!! ATCTAGTGCTTAATATATTT+AGG - chr7_4:48977444-48977463 Msa1159360:CDS 20.0%
!! CACTCAAAAACAAAATAAAA+TGG - chr7_4:48977755-48977774 Msa1159360:CDS 20.0%
!!! GTTTAATTTCATCATTATCA+TGG + chr7_4:48977804-48977823 None:intergenic 20.0%
!! ATCAAAGGAAATTATCAATA+TGG - chr7_4:48978279-48978298 Msa1159360:intron 20.0%
!! TGGAAATTATTCAAATGATA+TGG - chr7_4:48978772-48978791 Msa1159360:intron 20.0%
!!! AATTAAATTTGTTGAGCAGA+TGG - chr7_4:48977953-48977972 Msa1159360:CDS 25.0%
!!! ATTAAATTTGTTGAGCAGAT+GGG - chr7_4:48977954-48977973 Msa1159360:CDS 25.0%
! ATATCATTATCTGTTCTTTG+AGG + chr7_4:48978000-48978019 None:intergenic 25.0%
!!! TTTCCTTTGATTTGTGAATT+TGG + chr7_4:48978270-48978289 None:intergenic 25.0%
!!! TAATTTTGTGATGATGATGA+TGG + chr7_4:48978422-48978441 None:intergenic 25.0%
! ATCTTGTAATAATTCACCTT+TGG + chr7_4:48978448-48978467 None:intergenic 25.0%
! AAAGGTGAATTATTACAAGA+TGG - chr7_4:48978447-48978466 Msa1159360:CDS 25.0%
! TCATTTGAGAATCTTAACAA+TGG - chr7_4:48978507-48978526 Msa1159360:intron 25.0%
! ATTTCTTGAGAAATGGTTAT+TGG - chr7_4:48978647-48978666 Msa1159360:intron 25.0%
! ATCAAATAAACCCTTAAGTT+TGG - chr7_4:48978742-48978761 Msa1159360:intron 25.0%
! TCAAATAAACCCTTAAGTTT+GGG - chr7_4:48978743-48978762 Msa1159360:intron 25.0%
! AATTCTCTGATTATAAGACT+AGG - chr7_4:48978831-48978850 Msa1159360:CDS 25.0%
! ATTCTCTGATTATAAGACTA+GGG - chr7_4:48978832-48978851 Msa1159360:CDS 25.0%
!!! TTTTTATATTACATGGGTTG+AGG - chr7_4:48978860-48978879 Msa1159360:CDS 25.0%
!! ACATTTGTAGTTTTTCTACA+AGG + chr7_4:48978995-48979014 None:intergenic 25.0%
!!! AATTAAATTTGTTGAGCAGA+TGG - chr7_4:48977953-48977972 Msa1159360:CDS 25.0%
!!! ATTAAATTTGTTGAGCAGAT+GGG - chr7_4:48977954-48977973 Msa1159360:CDS 25.0%
! ATATCATTATCTGTTCTTTG+AGG + chr7_4:48978000-48978019 None:intergenic 25.0%
!!! TTTCCTTTGATTTGTGAATT+TGG + chr7_4:48978270-48978289 None:intergenic 25.0%
!!! TAATTTTGTGATGATGATGA+TGG + chr7_4:48978422-48978441 None:intergenic 25.0%
! ATCTTGTAATAATTCACCTT+TGG + chr7_4:48978448-48978467 None:intergenic 25.0%
! AAAGGTGAATTATTACAAGA+TGG - chr7_4:48978447-48978466 Msa1159360:CDS 25.0%
! TCATTTGAGAATCTTAACAA+TGG - chr7_4:48978507-48978526 Msa1159360:intron 25.0%
! ATTTCTTGAGAAATGGTTAT+TGG - chr7_4:48978647-48978666 Msa1159360:intron 25.0%
! ATCAAATAAACCCTTAAGTT+TGG - chr7_4:48978742-48978761 Msa1159360:intron 25.0%
! TCAAATAAACCCTTAAGTTT+GGG - chr7_4:48978743-48978762 Msa1159360:intron 25.0%
! AATTCTCTGATTATAAGACT+AGG - chr7_4:48978831-48978850 Msa1159360:CDS 25.0%
! ATTCTCTGATTATAAGACTA+GGG - chr7_4:48978832-48978851 Msa1159360:CDS 25.0%
!!! TTTTTATATTACATGGGTTG+AGG - chr7_4:48978860-48978879 Msa1159360:CDS 25.0%
!! ACATTTGTAGTTTTTCTACA+AGG + chr7_4:48978995-48979014 None:intergenic 25.0%
!!! AGAGTTTTGAGGTTGAAATT+TGG - chr7_4:48977126-48977145 Msa1159360:three_prime_UTR 30.0%
TAGTATTAAGCTTCTCTCAA+AGG - chr7_4:48977412-48977431 Msa1159360:CDS 30.0%
ATTTCATCATTATCATGGCA+AGG + chr7_4:48977799-48977818 None:intergenic 30.0%
TCACCAAATTCACAAATCAA+AGG - chr7_4:48978264-48978283 Msa1159360:intron 30.0%
ATTTCAAGGTTTAAATCAGC+TGG + chr7_4:48978399-48978418 None:intergenic 30.0%
TTGTAATAATTCACCTTTGG+TGG + chr7_4:48978445-48978464 None:intergenic 30.0%
TGATTCTATACCTCATGAAA+AGG - chr7_4:48978554-48978573 Msa1159360:intron 30.0%
GATTCTATACCTCATGAAAA+GGG - chr7_4:48978555-48978574 Msa1159360:intron 30.0%
CATTTCTCAAGAAATGACAA+AGG + chr7_4:48978642-48978661 None:intergenic 30.0%
! CTTTGTCATTTCTTGAGAAA+TGG - chr7_4:48978640-48978659 Msa1159360:intron 30.0%
TGGTTATTGGATGAAAATGT+TGG - chr7_4:48978660-48978679 Msa1159360:intron 30.0%
TTTCTTGCAAGTTAGAACAT+TGG + chr7_4:48978714-48978733 None:intergenic 30.0%
ATAAGCTAAATTAGTGCATG+TGG - chr7_4:48978959-48978978 Msa1159360:five_prime_UTR 30.0%
!!! AGAGTTTTGAGGTTGAAATT+TGG - chr7_4:48977126-48977145 Msa1159360:three_prime_UTR 30.0%
TAGTATTAAGCTTCTCTCAA+AGG - chr7_4:48977412-48977431 Msa1159360:CDS 30.0%
ATTTCATCATTATCATGGCA+AGG + chr7_4:48977799-48977818 None:intergenic 30.0%
TCACCAAATTCACAAATCAA+AGG - chr7_4:48978264-48978283 Msa1159360:intron 30.0%
ATTTCAAGGTTTAAATCAGC+TGG + chr7_4:48978399-48978418 None:intergenic 30.0%
TTGTAATAATTCACCTTTGG+TGG + chr7_4:48978445-48978464 None:intergenic 30.0%
TGATTCTATACCTCATGAAA+AGG - chr7_4:48978554-48978573 Msa1159360:intron 30.0%
GATTCTATACCTCATGAAAA+GGG - chr7_4:48978555-48978574 Msa1159360:intron 30.0%
CATTTCTCAAGAAATGACAA+AGG + chr7_4:48978642-48978661 None:intergenic 30.0%
! CTTTGTCATTTCTTGAGAAA+TGG - chr7_4:48978640-48978659 Msa1159360:intron 30.0%
TGGTTATTGGATGAAAATGT+TGG - chr7_4:48978660-48978679 Msa1159360:intron 30.0%
TTTCTTGCAAGTTAGAACAT+TGG + chr7_4:48978714-48978733 None:intergenic 30.0%
ATAAGCTAAATTAGTGCATG+TGG - chr7_4:48978959-48978978 Msa1159360:five_prime_UTR 30.0%
! AAGTAGTAGTGAGAGTTTTG+AGG - chr7_4:48977115-48977134 Msa1159360:three_prime_UTR 35.0%
TGGAGTGAAAAAAGAATCCA+TGG - chr7_4:48977146-48977165 Msa1159360:three_prime_UTR 35.0%
GGAGTGAAAAAAGAATCCAT+GGG - chr7_4:48977147-48977166 Msa1159360:three_prime_UTR 35.0%
!!! ATGCCTACTTTTTCACAACA+AGG + chr7_4:48977180-48977199 None:intergenic 35.0%
GAAAAAGTAGGCATCAAGAA+AGG - chr7_4:48977186-48977205 Msa1159360:three_prime_UTR 35.0%
ACAAGGATGATATCTTCTTC+AGG + chr7_4:48977222-48977241 None:intergenic 35.0%
GTTCTTGGATGTAAGAAACA+AGG + chr7_4:48977239-48977258 None:intergenic 35.0%
GTTTCTTACATCCAAGAACA+TGG - chr7_4:48977240-48977259 Msa1159360:three_prime_UTR 35.0%
AGAACAGTTCCTACTAATAC+AGG - chr7_4:48977276-48977295 Msa1159360:three_prime_UTR 35.0%
TGGATAAAAAAGGGTTGTCA+AGG - chr7_4:48977580-48977599 Msa1159360:CDS 35.0%
TTAGATGGACAAATTACCTG+AGG - chr7_4:48977622-48977641 Msa1159360:CDS 35.0%
ATAATCATTCCTTCTTCGTG+AGG + chr7_4:48977675-48977694 None:intergenic 35.0%
ATTCATTTGCAAGCTCTTCT+TGG - chr7_4:48977693-48977712 Msa1159360:CDS 35.0%
! CATTATCTGTTCTTTGAGGA+AGG + chr7_4:48977996-48978015 None:intergenic 35.0%
GTTGTTGATGTTGAGTTTGA+TGG + chr7_4:48978084-48978103 None:intergenic 35.0%
ACTTCTGTCACTAAAACTCT+TGG + chr7_4:48978115-48978134 None:intergenic 35.0%
!! CAAGCACTGAGAATATTTCA+AGG - chr7_4:48978217-48978236 Msa1159360:intron 35.0%
TGAGAATATTTCAAGGCTCT+TGG - chr7_4:48978224-48978243 Msa1159360:intron 35.0%
AATATTTCAAGGCTCTTGGA+AGG - chr7_4:48978228-48978247 Msa1159360:intron 35.0%
!! GATGATGATGATGGATTTCA+AGG + chr7_4:48978413-48978432 None:intergenic 35.0%
CATCACAAAATTACCACCAA+AGG - chr7_4:48978429-48978448 Msa1159360:CDS 35.0%
GGTGAATTATTACAAGATGG+TGG - chr7_4:48978450-48978469 Msa1159360:CDS 35.0%
TTCTCAAGAAATGACAAAGG+AGG + chr7_4:48978639-48978658 None:intergenic 35.0%
GTTGAGGAATCTTAGAAGTT+AGG - chr7_4:48978876-48978895 Msa1159360:CDS 35.0%
! AAGTAGTAGTGAGAGTTTTG+AGG - chr7_4:48977115-48977134 Msa1159360:three_prime_UTR 35.0%
TGGAGTGAAAAAAGAATCCA+TGG - chr7_4:48977146-48977165 Msa1159360:three_prime_UTR 35.0%
GGAGTGAAAAAAGAATCCAT+GGG - chr7_4:48977147-48977166 Msa1159360:three_prime_UTR 35.0%
!!! ATGCCTACTTTTTCACAACA+AGG + chr7_4:48977180-48977199 None:intergenic 35.0%
GAAAAAGTAGGCATCAAGAA+AGG - chr7_4:48977186-48977205 Msa1159360:three_prime_UTR 35.0%
ACAAGGATGATATCTTCTTC+AGG + chr7_4:48977222-48977241 None:intergenic 35.0%
GTTCTTGGATGTAAGAAACA+AGG + chr7_4:48977239-48977258 None:intergenic 35.0%
GTTTCTTACATCCAAGAACA+TGG - chr7_4:48977240-48977259 Msa1159360:three_prime_UTR 35.0%
AGAACAGTTCCTACTAATAC+AGG - chr7_4:48977276-48977295 Msa1159360:three_prime_UTR 35.0%
TGGATAAAAAAGGGTTGTCA+AGG - chr7_4:48977580-48977599 Msa1159360:CDS 35.0%
TTAGATGGACAAATTACCTG+AGG - chr7_4:48977622-48977641 Msa1159360:CDS 35.0%
ATAATCATTCCTTCTTCGTG+AGG + chr7_4:48977675-48977694 None:intergenic 35.0%
ATTCATTTGCAAGCTCTTCT+TGG - chr7_4:48977693-48977712 Msa1159360:CDS 35.0%
! CATTATCTGTTCTTTGAGGA+AGG + chr7_4:48977996-48978015 None:intergenic 35.0%
GTTGTTGATGTTGAGTTTGA+TGG + chr7_4:48978084-48978103 None:intergenic 35.0%
ACTTCTGTCACTAAAACTCT+TGG + chr7_4:48978115-48978134 None:intergenic 35.0%
!! CAAGCACTGAGAATATTTCA+AGG - chr7_4:48978217-48978236 Msa1159360:intron 35.0%
TGAGAATATTTCAAGGCTCT+TGG - chr7_4:48978224-48978243 Msa1159360:intron 35.0%
AATATTTCAAGGCTCTTGGA+AGG - chr7_4:48978228-48978247 Msa1159360:intron 35.0%
!! GATGATGATGATGGATTTCA+AGG + chr7_4:48978413-48978432 None:intergenic 35.0%
CATCACAAAATTACCACCAA+AGG - chr7_4:48978429-48978448 Msa1159360:CDS 35.0%
GGTGAATTATTACAAGATGG+TGG - chr7_4:48978450-48978469 Msa1159360:CDS 35.0%
TTCTCAAGAAATGACAAAGG+AGG + chr7_4:48978639-48978658 None:intergenic 35.0%
GTTGAGGAATCTTAGAAGTT+AGG - chr7_4:48978876-48978895 Msa1159360:CDS 35.0%
AGGCAAAGATTGAGAGAGAA+AGG + chr7_4:48977073-48977092 None:intergenic 40.0%
!!! CCTACTTTTTCACAACAAGG+AGG + chr7_4:48977177-48977196 None:intergenic 40.0%
! CCTCCTTGTTGTGAAAAAGT+AGG - chr7_4:48977174-48977193 Msa1159360:three_prime_UTR 40.0%
ATATCTTCTTCAGGTGTCCA+TGG + chr7_4:48977213-48977232 None:intergenic 40.0%
AATTTCCTGGACCATGTTCT+TGG + chr7_4:48977254-48977273 None:intergenic 40.0%
AAGAACATGGTCCAGGAAAT+TGG - chr7_4:48977253-48977272 Msa1159360:three_prime_UTR 40.0%
AAGTTTCCTCTCTTGATTCC+TGG + chr7_4:48977648-48977667 None:intergenic 40.0%
! TTGAGGAAGGTATGAAGCTA+TGG + chr7_4:48977983-48978002 None:intergenic 40.0%
ATTCTCAGTGCTTGAAGCAT+AGG + chr7_4:48978211-48978230 None:intergenic 40.0%
!! ATCTTAACAATGGTGCTGCT+TGG - chr7_4:48978517-48978536 Msa1159360:intron 40.0%
!! TCTTAACAATGGTGCTGCTT+GGG - chr7_4:48978518-48978537 Msa1159360:intron 40.0%
TCAAGAAATGACAAAGGAGG+AGG + chr7_4:48978636-48978655 None:intergenic 40.0%
GGATGAAAATGTTGGTCATG+TGG - chr7_4:48978668-48978687 Msa1159360:intron 40.0%
TGAAAATGTTGGTCATGTGG+AGG - chr7_4:48978671-48978690 Msa1159360:intron 40.0%
CCATGACATCCCAAACTTAA+GGG + chr7_4:48978755-48978774 None:intergenic 40.0%
TCCATGACATCCCAAACTTA+AGG + chr7_4:48978756-48978775 None:intergenic 40.0%
AGGCAAAGATTGAGAGAGAA+AGG + chr7_4:48977073-48977092 None:intergenic 40.0%
!!! CCTACTTTTTCACAACAAGG+AGG + chr7_4:48977177-48977196 None:intergenic 40.0%
! CCTCCTTGTTGTGAAAAAGT+AGG - chr7_4:48977174-48977193 Msa1159360:three_prime_UTR 40.0%
ATATCTTCTTCAGGTGTCCA+TGG + chr7_4:48977213-48977232 None:intergenic 40.0%
AATTTCCTGGACCATGTTCT+TGG + chr7_4:48977254-48977273 None:intergenic 40.0%
AAGAACATGGTCCAGGAAAT+TGG - chr7_4:48977253-48977272 Msa1159360:three_prime_UTR 40.0%
AAGTTTCCTCTCTTGATTCC+TGG + chr7_4:48977648-48977667 None:intergenic 40.0%
! TTGAGGAAGGTATGAAGCTA+TGG + chr7_4:48977983-48978002 None:intergenic 40.0%
ATTCTCAGTGCTTGAAGCAT+AGG + chr7_4:48978211-48978230 None:intergenic 40.0%
!! ATCTTAACAATGGTGCTGCT+TGG - chr7_4:48978517-48978536 Msa1159360:intron 40.0%
!! TCTTAACAATGGTGCTGCTT+GGG - chr7_4:48978518-48978537 Msa1159360:intron 40.0%
TCAAGAAATGACAAAGGAGG+AGG + chr7_4:48978636-48978655 None:intergenic 40.0%
GGATGAAAATGTTGGTCATG+TGG - chr7_4:48978668-48978687 Msa1159360:intron 40.0%
TGAAAATGTTGGTCATGTGG+AGG - chr7_4:48978671-48978690 Msa1159360:intron 40.0%
CCATGACATCCCAAACTTAA+GGG + chr7_4:48978755-48978774 None:intergenic 40.0%
TCCATGACATCCCAAACTTA+AGG + chr7_4:48978756-48978775 None:intergenic 40.0%
TAGGCATCAAGAAAGGTCCA+TGG - chr7_4:48977193-48977212 Msa1159360:three_prime_UTR 45.0%
TACATCCAAGAACATGGTCC+AGG - chr7_4:48977246-48977265 Msa1159360:three_prime_UTR 45.0%
GGAACTGTTCTCCAATTTCC+TGG + chr7_4:48977267-48977286 None:intergenic 45.0%
GCAAAAGTTGCAGGCTTAGA+TGG - chr7_4:48977607-48977626 Msa1159360:CDS 45.0%
AACTTCACTCCTCACGAAGA+AGG - chr7_4:48977663-48977682 Msa1159360:CDS 45.0%
TTTCAAGGCTCTTGGAAGGT+TGG - chr7_4:48978232-48978251 Msa1159360:intron 45.0%
! GAAGCTGAACCCTTTTCATG+AGG + chr7_4:48978567-48978586 None:intergenic 45.0%
TGGTCATGTGGAGGAAATGA+TGG - chr7_4:48978680-48978699 Msa1159360:intron 45.0%
! CCCTTAAGTTTGGGATGTCA+TGG - chr7_4:48978752-48978771 Msa1159360:intron 45.0%
TAGGCATCAAGAAAGGTCCA+TGG - chr7_4:48977193-48977212 Msa1159360:three_prime_UTR 45.0%
TACATCCAAGAACATGGTCC+AGG - chr7_4:48977246-48977265 Msa1159360:three_prime_UTR 45.0%
GGAACTGTTCTCCAATTTCC+TGG + chr7_4:48977267-48977286 None:intergenic 45.0%
GCAAAAGTTGCAGGCTTAGA+TGG - chr7_4:48977607-48977626 Msa1159360:CDS 45.0%
AACTTCACTCCTCACGAAGA+AGG - chr7_4:48977663-48977682 Msa1159360:CDS 45.0%
TTTCAAGGCTCTTGGAAGGT+TGG - chr7_4:48978232-48978251 Msa1159360:intron 45.0%
! GAAGCTGAACCCTTTTCATG+AGG + chr7_4:48978567-48978586 None:intergenic 45.0%
TGGTCATGTGGAGGAAATGA+TGG - chr7_4:48978680-48978699 Msa1159360:intron 45.0%
! CCCTTAAGTTTGGGATGTCA+TGG - chr7_4:48978752-48978771 Msa1159360:intron 45.0%
ACAACAAGGAGGTCTTCCCA+TGG + chr7_4:48977166-48977185 None:intergenic 50.0%
CAAGGTGCAGCAAAAGTTGC+AGG - chr7_4:48977598-48977617 Msa1159360:CDS 50.0%
TGGACAAATTACCTGAGGCC+AGG - chr7_4:48977627-48977646 Msa1159360:CDS 50.0%
ACAACAAGGAGGTCTTCCCA+TGG + chr7_4:48977166-48977185 None:intergenic 50.0%
CAAGGTGCAGCAAAAGTTGC+AGG - chr7_4:48977598-48977617 Msa1159360:CDS 50.0%
TGGACAAATTACCTGAGGCC+AGG - chr7_4:48977627-48977646 Msa1159360:CDS 50.0%
CTCTCTTGATTCCTGGCCTC+AGG + chr7_4:48977641-48977660 None:intergenic 55.0%
CTGAGGCCAGGAATCAAGAG+AGG - chr7_4:48977639-48977658 Msa1159360:CDS 55.0%
CTCTCTTGATTCCTGGCCTC+AGG + chr7_4:48977641-48977660 None:intergenic 55.0%
CTGAGGCCAGGAATCAAGAG+AGG - chr7_4:48977639-48977658 Msa1159360:CDS 55.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 48977039 48979077 48977039 ID=Msa1159360;Name=Msa1159360
chr7_4 mRNA 48977039 48979077 48977039 ID=Msa1159360-mRNA-1;Parent=Msa1159360;Name=Msa1159360-mRNA-1;_AED=0.05;_eAED=0.05;_QI=126|1|1|1|1|1|3|355|337
chr7_4 exon 48977039 48978144 48977039 ID=Msa1159360-mRNA-1:exon:13356;Parent=Msa1159360-mRNA-1
chr7_4 exon 48978395 48978524 48978395 ID=Msa1159360-mRNA-1:exon:13355;Parent=Msa1159360-mRNA-1
chr7_4 exon 48978819 48979077 48978819 ID=Msa1159360-mRNA-1:exon:13354;Parent=Msa1159360-mRNA-1
chr7_4 five_prime_UTR 48978952 48979077 48978952 ID=Msa1159360-mRNA-1:five_prime_utr;Parent=Msa1159360-mRNA-1
chr7_4 CDS 48978819 48978951 48978819 ID=Msa1159360-mRNA-1:cds;Parent=Msa1159360-mRNA-1
chr7_4 CDS 48978395 48978524 48978395 ID=Msa1159360-mRNA-1:cds;Parent=Msa1159360-mRNA-1
chr7_4 CDS 48977394 48978144 48977394 ID=Msa1159360-mRNA-1:cds;Parent=Msa1159360-mRNA-1
chr7_4 three_prime_UTR 48977039 48977393 48977039 ID=Msa1159360-mRNA-1:three_prime_utr;Parent=Msa1159360-mRNA-1
Gene Sequence

>Msa1159360

ATGGGAAGACCTCCTTGTTGTGAAAAAGTAGGCATCAAGAAAGGTCCATGGACACCTGAAGAAGATATCATCCTTGTTTCTTACATCCAAGAACATGGTCCAGGAAATTGGAGAACAGTTCCTACTAATACAGGGTTGTCAAGGTGCAGCAAAAGTTGCAGGCTTAGATGGACAAATTACCTGAGGCCAGGAATCAAGAGAGGAAACTTCACTCCTCACGAAGAAGGAATGATTATTCATTTGCAAGCTCTTCTTGGTAACAAATGGGCAGCCATAGCTTCATACCTTCCTCAAAGAACAGATAATGATATAAAGAATTATTGGAACACACATCTAAAGAAAAAGCTCAACAAATTTCATGCAGCTTTAGATCCATCAAACTCAACATCAACAACTTATCTATCCAAGAGTTTTAGTGACAGAAGTTTAGATGTTAGCAACAATCATACTTCATCTCTTAAGATTAATACTCAAAATTCTCATCAATCTTCTTCTTCAACCTATGCTTCAAGCACTGAGAATATTTCAAGGCTCTTGGAAGGTTGGATGAGATCTTCACCAAATTCACAAATCAAAGGAAATTATCAATATGGTCATCAAGAGTTTCAAAGCATTAATGATGATATTATTGATGATAATAATGAGTTTGAAAATAATGGGAAATTGTTAGTGAAGTCTGCTTCAGTTCCAGCTGATTTAAACCTTGAAATCCATCATCATCATCACAAAATTACCACCAAAGGTGAATTATTACAAGATGGTGGAGTTTCACATGATCAAGAGTTTGATTCTATTCTTTCATTTGAGAATCTTAACAATGGTGCTGCTTGGGACAAGTCAACTTGTGATTCTATACCTCATGAAAAGGGTTCAGCTTCTTCTTCTTCTTCTCATCACAAGAATATTAAGAATTTATGTGCAGCTCCTCCTCCTTTGTCATTTCTTGAGAAATGGTTATTGGATGAAAATGTTGGTCATGTGGAGGAAATGATGGAATTATCTCCAATGTTCTAA
Protein sequence

>Msa1159360

MGRPPCCEKVGIKKGPWTPEEDIILVSYIQEHGPGNWRTVPTNTGLSRCSKSCRLRWTNYLRPGIKRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNDIKNYWNTHLKKKLNKFHAALDPSNSTSTTYLSKSFSDRSLDVSNNHTSSLKINTQNSHQSSSSTYASSTENISRLLEGWMRSSPNSQIKGNYQYGHQEFQSINDDIIDDNNEFENNGKLLVKSASVPADLNLEIHHHHHKITTKGELLQDGGVSHDQEFDSILSFENLNNGAAWDKSTCDSIPHEKGSASSSSSHHKNIKNLCAAPPPLSFLEKWLLDENVGHVEEMMELSPMF*