Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0428760 | XP_039687674.1 | 98.916 | 369 | 4 | 0 | 1 | 369 | 1 | 369 | 0.0 | 763 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0428760 | G7J3W3 | 98.916 | 369 | 4 | 0 | 1 | 369 | 1 | 369 | 0.0 | 763 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0032350 | Msa0428760 | -0.804527 | 2.069568e-49 | -8.615850e-47 |
| Msa0043680 | Msa0428760 | -0.804719 | 1.887703e-49 | -8.615850e-47 |
| Msa0077910 | Msa0428760 | -0.841927 | 3.531109e-58 | -8.615850e-47 |
| Msa0079530 | Msa0428760 | -0.803668 | 3.122965e-49 | -8.615850e-47 |
| Msa0081300 | Msa0428760 | -0.801575 | 8.439919e-49 | -8.615850e-47 |
| Msa0092180 | Msa0428760 | -0.814448 | 1.532805e-51 | -8.615850e-47 |
| Msa0092660 | Msa0428760 | -0.806673 | 7.336929e-50 | -8.615850e-47 |
| Msa0122210 | Msa0428760 | -0.821824 | 3.287250e-53 | -8.615850e-47 |
| Msa0125800 | Msa0428760 | -0.838687 | 2.479301e-57 | -8.615850e-47 |
| Msa0131440 | Msa0428760 | -0.801715 | 7.900648e-49 | -8.615850e-47 |
| Msa0150210 | Msa0428760 | -0.810223 | 1.282300e-50 | -8.615850e-47 |
| Msa0155550 | Msa0428760 | -0.802847 | 4.619225e-49 | -8.615850e-47 |
| Msa0170440 | Msa0428760 | -0.841511 | 4.545408e-58 | -8.615850e-47 |
| Msa0172660 | Msa0428760 | -0.813735 | 2.201956e-51 | -8.615850e-47 |
| Msa0177280 | Msa0428760 | -0.811181 | 7.960485e-51 | -8.615850e-47 |
| Msa0379170 | Msa0428760 | 0.995591 | 8.112196e-218 | -8.615850e-47 |
| Msa0379450 | Msa0428760 | -0.836325 | 9.999406e-57 | -8.615850e-47 |
| Msa0380060 | Msa0428760 | -0.838264 | 3.189515e-57 | -8.615850e-47 |
| Msa0425810 | Msa0428760 | -0.824024 | 1.009984e-53 | -8.615850e-47 |
| Msa0428760 | Msa0429270 | -0.838466 | 2.828796e-57 | -8.615850e-47 |
| Msa0428760 | Msa0472270 | -0.835926 | 1.262876e-56 | -8.615850e-47 |
| Msa0428760 | Msa0472570 | -0.821509 | 3.888994e-53 | -8.615850e-47 |
| Msa0428760 | Msa0475140 | 0.867173 | 1.663274e-65 | -8.615850e-47 |
| Msa0428760 | Msa0503120 | -0.800473 | 1.417702e-48 | -8.615850e-47 |
| Msa0428760 | Msa0504740 | -0.805361 | 1.385581e-49 | -8.615850e-47 |
| Msa0428760 | Msa0519200 | -0.817446 | 3.283165e-52 | -8.615850e-47 |
| Msa0428760 | Msa0524210 | -0.802704 | 4.944507e-49 | -8.615850e-47 |
| Msa0428760 | Msa0593710 | -0.801832 | 7.476923e-49 | -8.615850e-47 |
| Msa0428760 | Msa0687860 | 0.801153 | 1.029776e-48 | -8.615850e-47 |
| Msa0428760 | Msa0705250 | -0.805091 | 1.578372e-49 | -8.615850e-47 |
| Msa0428760 | Msa0732100 | -0.842180 | 3.027235e-58 | -8.615850e-47 |
| Msa0428760 | Msa0733110 | -0.814212 | 1.728468e-51 | -8.615850e-47 |
| Msa0428760 | Msa0738880 | -0.811343 | 7.341752e-51 | -8.615850e-47 |
| Msa0428760 | Msa0773080 | -0.837122 | 6.262219e-57 | -8.615850e-47 |
| Msa0428760 | Msa0774090 | -0.801336 | 9.446546e-49 | -8.615850e-47 |
| Msa0428760 | Msa0802080 | 0.820554 | 6.452217e-53 | -8.615850e-47 |
| Msa0428760 | Msa0810370 | -0.846747 | 1.788606e-59 | -8.615850e-47 |
| Msa0428760 | Msa0819320 | -0.813309 | 2.731700e-51 | -8.615850e-47 |
| Msa0428760 | Msa0819370 | -0.812913 | 3.337263e-51 | -8.615850e-47 |
| Msa0428760 | Msa0886880 | -0.819443 | 1.158208e-52 | -8.615850e-47 |
| Msa0428760 | Msa0931480 | -0.802158 | 6.405766e-49 | -8.615850e-47 |
| Msa0428760 | Msa0945560 | -0.816045 | 6.769128e-52 | -8.615850e-47 |
| Msa0428760 | Msa0988030 | -0.802820 | 4.679979e-49 | -8.615850e-47 |
| Msa0428760 | Msa1022310 | -0.803362 | 3.614637e-49 | -8.615850e-47 |
| Msa0428760 | Msa1027790 | -0.802362 | 5.817022e-49 | -8.615850e-47 |
| Msa0428760 | Msa1033120 | -0.811856 | 5.678732e-51 | -8.615850e-47 |
| Msa0428760 | Msa1061310 | -0.837103 | 6.333226e-57 | -8.615850e-47 |
| Msa0428760 | Msa1084150 | -0.827756 | 1.312039e-54 | -8.615850e-47 |
| Msa0428760 | Msa1106580 | -0.836510 | 8.972124e-57 | -8.615850e-47 |
| Msa0428760 | Msa1112610 | -0.803105 | 4.086455e-49 | -8.615850e-47 |
| Msa0428760 | Msa1127510 | -0.813341 | 2.688319e-51 | -8.615850e-47 |
| Msa0428760 | Msa1149960 | -0.853394 | 2.460400e-61 | -8.615850e-47 |
| Msa0428760 | Msa1208750 | -0.822595 | 2.177414e-53 | -8.615850e-47 |
| Msa0428760 | Msa1235780 | 0.807670 | 4.513119e-50 | -8.615850e-47 |
| Msa0428760 | Msa1262320 | 0.816031 | 6.820507e-52 | -8.615850e-47 |
| Msa0428760 | Msa1279700 | -0.848463 | 6.032031e-60 | -8.615850e-47 |
| Msa0428760 | Msa1398740 | -0.800682 | 1.285169e-48 | -8.615850e-47 |
| Msa0428760 | Msa1398840 | -0.832378 | 9.782173e-56 | -8.615850e-47 |
| Msa0428760 | Msa1411830 | -0.820964 | 5.191457e-53 | -8.615850e-47 |
| Msa0428760 | Msa1412750 | -0.800741 | 1.249924e-48 | -8.615850e-47 |
| Msa0428760 | Msa1417650 | -0.804718 | 1.888266e-49 | -8.615850e-47 |
| Msa0428760 | Msa1434020 | -0.806231 | 9.094995e-50 | -8.615850e-47 |
| Msa0261440 | Msa0428760 | -0.810412 | 1.167833e-50 | -8.615850e-47 |
| Msa0342620 | Msa0428760 | -0.810500 | 1.117719e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0428760 | MtrunA17_Chr3g0132211 | 98.916 | 369 | 4 | 0 | 1 | 369 | 1 | 369 | 0.0 | 763 |
| Msa0428760 | MtrunA17_Chr4g0057361 | 72.460 | 374 | 73 | 7 | 1 | 365 | 1 | 353 | 0.0 | 533 |
| Msa0428760 | MtrunA17_Chr4g0057931 | 71.067 | 356 | 78 | 6 | 13 | 360 | 6 | 344 | 1.11e-175 | 492 |
| Msa0428760 | MtrunA17_Chr2g0302241 | 98.667 | 225 | 3 | 0 | 1 | 225 | 1 | 225 | 1.38e-164 | 459 |
| Msa0428760 | MtrunA17_Chr2g0302251 | 100.000 | 79 | 0 | 0 | 291 | 369 | 1 | 79 | 2.92e-52 | 168 |
| Msa0428760 | MtrunA17_Chr8g0374071 | 30.198 | 202 | 124 | 5 | 166 | 355 | 181 | 377 | 2.36e-18 | 87.0 |
| Msa0428760 | MtrunA17_Chr8g0374091 | 29.703 | 202 | 125 | 5 | 166 | 355 | 181 | 377 | 2.89e-18 | 86.7 |
| Msa0428760 | MtrunA17_Chr1g0203981 | 29.167 | 192 | 114 | 7 | 181 | 357 | 174 | 358 | 6.23e-17 | 82.4 |
| Msa0428760 | MtrunA17_Chr6g0474301 | 29.146 | 199 | 122 | 7 | 181 | 367 | 172 | 363 | 2.09e-14 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0428760 | AT2G23520.1 | 29.208 | 202 | 126 | 5 | 166 | 355 | 182 | 378 | 3.09e-18 | 87.0 |
| Msa0428760 | AT5G66950.1 | 32.597 | 181 | 105 | 6 | 187 | 355 | 201 | 376 | 3.73e-18 | 86.7 |
| Msa0428760 | AT5G51920.1 | 27.615 | 239 | 140 | 9 | 137 | 357 | 128 | 351 | 3.49e-17 | 83.6 |
| Msa0428760 | AT4G37100.1 | 28.713 | 202 | 127 | 6 | 166 | 355 | 186 | 382 | 4.12e-17 | 83.6 |
| Msa0428760 | AT4G22980.1 | 28.807 | 243 | 144 | 8 | 138 | 357 | 94 | 330 | 4.85e-15 | 77.0 |
Find 88 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAATCAACCTTGAATATTC+TGG | 0.214881 | 3_2:+79733595 | None:intergenic |
| TGGTTGGACTTGAGGATTAA+AGG | 0.225306 | 3_2:-79733121 | Msa0428760:CDS |
| AGAAAGTTACCCTTTCATTA+AGG | 0.229969 | 3_2:-79733239 | Msa0428760:CDS |
| ATCAAACAGCATGGTCTTAA+AGG | 0.234277 | 3_2:-79733854 | Msa0428760:intron |
| AGGATTCCTTTCTGACTAAA+AGG | 0.251516 | 3_2:+79732834 | None:intergenic |
| GGCACTGAAAAGTATTAGTA+TGG | 0.260430 | 3_2:-79734123 | Msa0428760:exon |
| AGGATTGGAATTAGTGTTAC+TGG | 0.261905 | 3_2:+79732871 | None:intergenic |
| TCAACATATTCCATTTCTTT+TGG | 0.272659 | 3_2:+79733640 | None:intergenic |
| AACAAGAAATCCTCATTTAC+TGG | 0.292904 | 3_2:-79733385 | Msa0428760:CDS |
| ATCTTGGCCCTGTCAGATTC+AGG | 0.305608 | 3_2:+79733442 | None:intergenic |
| CTCAGTTAAGTCAAAACTTT+AGG | 0.307220 | 3_2:-79733096 | Msa0428760:CDS |
| CCTAATACCTTATAAAATCT+TGG | 0.318166 | 3_2:+79734144 | None:intergenic |
| GAAAGTTACCCTTTCATTAA+GGG | 0.324695 | 3_2:-79733238 | Msa0428760:CDS |
| GGAAATTCAAGCTCAAAATA+AGG | 0.334997 | 3_2:-79733344 | Msa0428760:CDS |
| AGGTTCTTCATTGATGATAA+AGG | 0.352472 | 3_2:+79733543 | None:intergenic |
| CTCAAGTCCAACCAAGTCTT+TGG | 0.354864 | 3_2:+79733130 | None:intergenic |
| TGAAGAACCTTTAGATGAAA+AGG | 0.360026 | 3_2:-79733530 | Msa0428760:CDS |
| TGATTGCTCCAATTGAATCT+TGG | 0.367304 | 3_2:+79733426 | None:intergenic |
| GGATAAGAGAATAAGCCTTT+TGG | 0.370572 | 3_2:+79733055 | None:intergenic |
| TAGCCAGGAGCATGAAATTT+CGG | 0.383870 | 3_2:-79734093 | Msa0428760:CDS |
| TTGATTGAAGGAGATGGAAA+TGG | 0.386242 | 3_2:-79733580 | Msa0428760:CDS |
| GGTTGGACTTGAGGATTAAA+GGG | 0.390781 | 3_2:-79733120 | Msa0428760:CDS |
| TCCAATCACACCAAAAGAAA+TGG | 0.396737 | 3_2:-79733650 | Msa0428760:CDS |
| AGACTACAGATCACAAAATC+AGG | 0.400820 | 3_2:+79732911 | None:intergenic |
| GCAAGTGATTCTTGAAGGAT+TGG | 0.425657 | 3_2:+79732856 | None:intergenic |
| ATCTTCTTCTTGATCAAGAA+TGG | 0.426120 | 3_2:+79733201 | None:intergenic |
| CAGAAGCTCACAGGAACAAT+TGG | 0.426312 | 3_2:-79733000 | Msa0428760:CDS |
| GATTCTTCTTCATATACATT+TGG | 0.428676 | 3_2:-79733475 | Msa0428760:CDS |
| CTAATACCTTATAAAATCTT+GGG | 0.442998 | 3_2:+79734145 | None:intergenic |
| GATGCCTCTGCTTATGTAGT+TGG | 0.445059 | 3_2:-79732965 | Msa0428760:CDS |
| CAAAGTATCCAGAATATTCA+AGG | 0.446957 | 3_2:-79733603 | Msa0428760:CDS |
| CACATCAGCTGCTTCATCTC+AGG | 0.449866 | 3_2:-79732807 | Msa0428760:CDS |
| TGATTGAAGGAGATGGAAAT+GGG | 0.449991 | 3_2:-79733579 | Msa0428760:CDS |
| AAAAGGCAAGTGATTCTTGA+AGG | 0.453246 | 3_2:+79732851 | None:intergenic |
| CAAAGACTTGGTTGGACTTG+AGG | 0.454098 | 3_2:-79733129 | Msa0428760:CDS |
| TCCAACCAAGTCTTTGGTGC+AGG | 0.454333 | 3_2:+79733136 | None:intergenic |
| TACCTTGTTCTCTTCACTCC+AGG | 0.458116 | 3_2:-79733289 | Msa0428760:CDS |
| AGATTCAATTGGAGCAATCA+AGG | 0.463937 | 3_2:-79733423 | Msa0428760:CDS |
| TGACAGGGCCAAGATTCAAT+TGG | 0.465387 | 3_2:-79733434 | Msa0428760:CDS |
| TCCGCGAATTCGATATTAGA+TGG | 0.471848 | 3_2:-79733678 | Msa0428760:CDS |
| CTTCCGAAATTTCATGCTCC+TGG | 0.473940 | 3_2:+79734090 | None:intergenic |
| ATCATAGCATCCTTGTAGCC+TGG | 0.481377 | 3_2:+79733271 | None:intergenic |
| TCTCTTCACTCCAGGCTACA+AGG | 0.485295 | 3_2:-79733281 | Msa0428760:CDS |
| ACCATCTAATATCGAATTCG+CGG | 0.487526 | 3_2:+79733677 | None:intergenic |
| GAAGAACCTTTAGATGAAAA+GGG | 0.490344 | 3_2:-79733529 | Msa0428760:CDS |
| AGTAGTTTCCCTTAATGAAA+GGG | 0.500410 | 3_2:+79733230 | None:intergenic |
| CCCTGCACCAAAGACTTGGT+TGG | 0.503875 | 3_2:-79733137 | Msa0428760:CDS |
| TTATCCCTGCACCAAAGACT+TGG | 0.509762 | 3_2:-79733141 | Msa0428760:CDS |
| GTAGTCTACCTGAATCTGAC+AGG | 0.512389 | 3_2:-79733450 | Msa0428760:CDS |
| TGGAAGTTTCATATCGATCC+CGG | 0.516056 | 3_2:-79733365 | Msa0428760:CDS |
| CTTATGTTAGGTAACATATC+CGG | 0.517913 | 3_2:-79733947 | Msa0428760:intron |
| GAATTCGATATTAGATGGTC+AGG | 0.521252 | 3_2:-79733673 | Msa0428760:CDS |
| TAGTAGTTTCCCTTAATGAA+AGG | 0.521318 | 3_2:+79733229 | None:intergenic |
| GAATATTCAAGGTTGATTGA+AGG | 0.523778 | 3_2:-79733592 | Msa0428760:CDS |
| TCAAGGTTGATTGAAGGAGA+TGG | 0.526868 | 3_2:-79733586 | Msa0428760:CDS |
| TAAGTCAAAACTTTAGGAGG+AGG | 0.533314 | 3_2:-79733090 | Msa0428760:CDS |
| GCTTCAGCTATGATGTGAGC+TGG | 0.534188 | 3_2:+79733712 | None:intergenic |
| GAGCATGAAATTTCGGAAGC+AGG | 0.535416 | 3_2:-79734086 | Msa0428760:CDS |
| TATGAAACTTCCAGTAAATG+AGG | 0.537711 | 3_2:+79733375 | None:intergenic |
| GAAGTCAAGGACATTAAGAA+AGG | 0.539164 | 3_2:-79733910 | Msa0428760:CDS |
| AGGTGTAAGATCAGTCCAAA+AGG | 0.543212 | 3_2:-79733070 | Msa0428760:CDS |
| GAAGAAGAATCTCTAGGACT+AGG | 0.547253 | 3_2:+79733487 | None:intergenic |
| ATGCTAGTGGAACAATGCAT+TGG | 0.548958 | 3_2:-79733027 | Msa0428760:CDS |
| CTACAAGGATGCTATGATGT+TGG | 0.551390 | 3_2:-79733266 | Msa0428760:CDS |
| AGTTAAGTCAAAACTTTAGG+AGG | 0.555539 | 3_2:-79733093 | Msa0428760:CDS |
| CTAGGACTAGGAGTCCCTCT+TGG | 0.556097 | 3_2:+79733499 | None:intergenic |
| ATTGTTCCACTAGCATCTGC+TGG | 0.557819 | 3_2:+79733034 | None:intergenic |
| CTCTGCTTATGTAGTTGGAA+AGG | 0.565206 | 3_2:-79732960 | Msa0428760:CDS |
| GTATATGAAGAAGAATCTCT+AGG | 0.565470 | 3_2:+79733481 | None:intergenic |
| TAGTATGGGAACAAATAGCC+AGG | 0.572151 | 3_2:-79734108 | Msa0428760:exon |
| TGAAGCAGCTGATGTGTCAA+AGG | 0.574148 | 3_2:+79732814 | None:intergenic |
| AAGGATGCTATGATGTTGGT+AGG | 0.578373 | 3_2:-79733262 | Msa0428760:CDS |
| ATTGGATCTCAGAAGCTCAC+AGG | 0.582954 | 3_2:-79733009 | Msa0428760:CDS |
| TCTTATCCAGCAGATGCTAG+TGG | 0.585875 | 3_2:-79733040 | Msa0428760:CDS |
| GAAAAGGGAAAGTCACCAAG+AGG | 0.596956 | 3_2:-79733514 | Msa0428760:CDS |
| CCAACCAAGTCTTTGGTGCA+GGG | 0.603770 | 3_2:+79733137 | None:intergenic |
| GCACTGAAAAGTATTAGTAT+GGG | 0.608803 | 3_2:-79734122 | Msa0428760:exon |
| GGTTGTAGAAAATGAAGTCA+AGG | 0.620310 | 3_2:-79733923 | Msa0428760:CDS |
| AGCCTGGAGTGAAGAGAACA+AGG | 0.633075 | 3_2:+79733287 | None:intergenic |
| GACTACAGATCACAAAATCA+GGG | 0.633592 | 3_2:+79732912 | None:intergenic |
| ATGTTAGGTAACATATCCGG+AGG | 0.642612 | 3_2:-79733944 | Msa0428760:intron |
| CTTATGTAGTTGGAAAGGAT+CGG | 0.648072 | 3_2:-79732955 | Msa0428760:CDS |
| CTTTCCAACTACATAAGCAG+AGG | 0.664110 | 3_2:+79732961 | None:intergenic |
| AATTTCGGAAGCAGGATCTG+AGG | 0.669678 | 3_2:-79734078 | Msa0428760:intron |
| AAGTTGCAAATCAAACAGCA+TGG | 0.672925 | 3_2:-79733863 | Msa0428760:CDS |
| AAAAGGGAAAGTCACCAAGA+GGG | 0.676816 | 3_2:-79733513 | Msa0428760:CDS |
| TAGTCTACCTGAATCTGACA+GGG | 0.688795 | 3_2:-79733449 | Msa0428760:CDS |
| TACAGATCACAAAATCAGGG+CGG | 0.767436 | 3_2:+79732915 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAATCACACATA+AGG | + | chr3_2:79732944-79732963 | None:intergenic | 15.0% |
| !! | AAAAAAAAAAATCACACATA+AGG | + | chr3_2:79732944-79732963 | None:intergenic | 15.0% |
| !! | CTAATACCTTATAAAATCTT+GGG | + | chr3_2:79732814-79732833 | None:intergenic | 20.0% |
| !! | ATACACTTTAATCTTATGTT+AGG | - | chr3_2:79732997-79733016 | Msa0428760:CDS | 20.0% |
| !!! | TCAAGAAGAAGATTTTATAA+AGG | - | chr3_2:79733765-79733784 | Msa0428760:intron | 20.0% |
| !! | CTAATACCTTATAAAATCTT+GGG | + | chr3_2:79732814-79732833 | None:intergenic | 20.0% |
| !! | ATACACTTTAATCTTATGTT+AGG | - | chr3_2:79732997-79733016 | Msa0428760:CDS | 20.0% |
| !!! | TCAAGAAGAAGATTTTATAA+AGG | - | chr3_2:79733765-79733784 | Msa0428760:intron | 20.0% |
| ! | CCTAATACCTTATAAAATCT+TGG | + | chr3_2:79732815-79732834 | None:intergenic | 25.0% |
| !!! | CCAAGATTTTATAAGGTATT+AGG | - | chr3_2:79732812-79732831 | Msa0428760:CDS | 25.0% |
| ! | CCAACAAACAAATTAAAAGT+TGG | + | chr3_2:79733141-79733160 | None:intergenic | 25.0% |
| !!! | CCAACTTTTAATTTGTTTGT+TGG | - | chr3_2:79733138-79733157 | Msa0428760:CDS | 25.0% |
| !!! | TTTTTTCAGCTTCAATTCAT+TGG | + | chr3_2:79733183-79733202 | None:intergenic | 25.0% |
| ! | ATGAATTGAAGCTGAAAAAA+TGG | - | chr3_2:79733183-79733202 | Msa0428760:CDS | 25.0% |
| ! | TGAATTGTATCAAAACAGAA+AGG | - | chr3_2:79733208-79733227 | Msa0428760:CDS | 25.0% |
| !! | TCAACATATTCCATTTCTTT+TGG | + | chr3_2:79733319-79733338 | None:intergenic | 25.0% |
| ! | GATTCTTCTTCATATACATT+TGG | - | chr3_2:79733481-79733500 | Msa0428760:CDS | 25.0% |
| !!! | TTATTTTGAGCTTGAATTTC+CGG | + | chr3_2:79733613-79733632 | None:intergenic | 25.0% |
| !!! | AATAAGGTTTTGAAGCATTA+CGG | - | chr3_2:79733628-79733647 | Msa0428760:CDS | 25.0% |
| !!! | AAAGGAATTTGCTTGTTTTA+AGG | - | chr3_2:79733783-79733802 | Msa0428760:intron | 25.0% |
| ! | CCTAATACCTTATAAAATCT+TGG | + | chr3_2:79732815-79732834 | None:intergenic | 25.0% |
| !!! | CCAAGATTTTATAAGGTATT+AGG | - | chr3_2:79732812-79732831 | Msa0428760:CDS | 25.0% |
| ! | CCAACAAACAAATTAAAAGT+TGG | + | chr3_2:79733141-79733160 | None:intergenic | 25.0% |
| !!! | CCAACTTTTAATTTGTTTGT+TGG | - | chr3_2:79733138-79733157 | Msa0428760:CDS | 25.0% |
| !!! | TTTTTTCAGCTTCAATTCAT+TGG | + | chr3_2:79733183-79733202 | None:intergenic | 25.0% |
| ! | ATGAATTGAAGCTGAAAAAA+TGG | - | chr3_2:79733183-79733202 | Msa0428760:CDS | 25.0% |
| ! | TGAATTGTATCAAAACAGAA+AGG | - | chr3_2:79733208-79733227 | Msa0428760:CDS | 25.0% |
| !! | TCAACATATTCCATTTCTTT+TGG | + | chr3_2:79733319-79733338 | None:intergenic | 25.0% |
| ! | GATTCTTCTTCATATACATT+TGG | - | chr3_2:79733481-79733500 | Msa0428760:CDS | 25.0% |
| !!! | TTATTTTGAGCTTGAATTTC+CGG | + | chr3_2:79733613-79733632 | None:intergenic | 25.0% |
| !!! | AATAAGGTTTTGAAGCATTA+CGG | - | chr3_2:79733628-79733647 | Msa0428760:CDS | 25.0% |
| !!! | AAAGGAATTTGCTTGTTTTA+AGG | - | chr3_2:79733783-79733802 | Msa0428760:intron | 25.0% |
| ! | CTTCTACCCAAGATTTTATA+AGG | - | chr3_2:79732805-79732824 | Msa0428760:CDS | 30.0% |
| !! | GCACTGAAAAGTATTAGTAT+GGG | - | chr3_2:79732834-79732853 | Msa0428760:CDS | 30.0% |
| ! | CTGAATTATTGAAGCATTAG+AGG | + | chr3_2:79732969-79732988 | None:intergenic | 30.0% |
| CTTATGTTAGGTAACATATC+CGG | - | chr3_2:79733009-79733028 | Msa0428760:CDS | 30.0% | |
| ! | CAAAGTATCCAGAATATTCA+AGG | - | chr3_2:79733353-79733372 | Msa0428760:CDS | 30.0% |
| TCAATCAACCTTGAATATTC+TGG | + | chr3_2:79733364-79733383 | None:intergenic | 30.0% | |
| ! | GAATATTCAAGGTTGATTGA+AGG | - | chr3_2:79733364-79733383 | Msa0428760:CDS | 30.0% |
| ! | AGGTTCTTCATTGATGATAA+AGG | + | chr3_2:79733416-79733435 | None:intergenic | 30.0% |
| TGAAGAACCTTTAGATGAAA+AGG | - | chr3_2:79733426-79733445 | Msa0428760:CDS | 30.0% | |
| GAAGAACCTTTAGATGAAAA+GGG | - | chr3_2:79733427-79733446 | Msa0428760:CDS | 30.0% | |
| GTATATGAAGAAGAATCTCT+AGG | + | chr3_2:79733478-79733497 | None:intergenic | 30.0% | |
| AACAAGAAATCCTCATTTAC+TGG | - | chr3_2:79733571-79733590 | Msa0428760:CDS | 30.0% | |
| TATGAAACTTCCAGTAAATG+AGG | + | chr3_2:79733584-79733603 | None:intergenic | 30.0% | |
| !! | TATTTTGAGCTTGAATTTCC+GGG | + | chr3_2:79733612-79733631 | None:intergenic | 30.0% |
| GGAAATTCAAGCTCAAAATA+AGG | - | chr3_2:79733612-79733631 | Msa0428760:CDS | 30.0% | |
| AGAAAGTTACCCTTTCATTA+AGG | - | chr3_2:79733717-79733736 | Msa0428760:CDS | 30.0% | |
| GAAAGTTACCCTTTCATTAA+GGG | - | chr3_2:79733718-79733737 | Msa0428760:CDS | 30.0% | |
| AGTAGTTTCCCTTAATGAAA+GGG | + | chr3_2:79733729-79733748 | None:intergenic | 30.0% | |
| TAGTAGTTTCCCTTAATGAA+AGG | + | chr3_2:79733730-79733749 | None:intergenic | 30.0% | |
| ATCTTCTTCTTGATCAAGAA+TGG | + | chr3_2:79733758-79733777 | None:intergenic | 30.0% | |
| CTCAGTTAAGTCAAAACTTT+AGG | - | chr3_2:79733860-79733879 | Msa0428760:CDS | 30.0% | |
| AGTTAAGTCAAAACTTTAGG+AGG | - | chr3_2:79733863-79733882 | Msa0428760:CDS | 30.0% | |
| ! | CTTCTACCCAAGATTTTATA+AGG | - | chr3_2:79732805-79732824 | Msa0428760:CDS | 30.0% |
| !! | GCACTGAAAAGTATTAGTAT+GGG | - | chr3_2:79732834-79732853 | Msa0428760:CDS | 30.0% |
| ! | CTGAATTATTGAAGCATTAG+AGG | + | chr3_2:79732969-79732988 | None:intergenic | 30.0% |
| CTTATGTTAGGTAACATATC+CGG | - | chr3_2:79733009-79733028 | Msa0428760:CDS | 30.0% | |
| ! | CAAAGTATCCAGAATATTCA+AGG | - | chr3_2:79733353-79733372 | Msa0428760:CDS | 30.0% |
| TCAATCAACCTTGAATATTC+TGG | + | chr3_2:79733364-79733383 | None:intergenic | 30.0% | |
| ! | GAATATTCAAGGTTGATTGA+AGG | - | chr3_2:79733364-79733383 | Msa0428760:CDS | 30.0% |
| ! | AGGTTCTTCATTGATGATAA+AGG | + | chr3_2:79733416-79733435 | None:intergenic | 30.0% |
| TGAAGAACCTTTAGATGAAA+AGG | - | chr3_2:79733426-79733445 | Msa0428760:CDS | 30.0% | |
| GAAGAACCTTTAGATGAAAA+GGG | - | chr3_2:79733427-79733446 | Msa0428760:CDS | 30.0% | |
| GTATATGAAGAAGAATCTCT+AGG | + | chr3_2:79733478-79733497 | None:intergenic | 30.0% | |
| AACAAGAAATCCTCATTTAC+TGG | - | chr3_2:79733571-79733590 | Msa0428760:CDS | 30.0% | |
| TATGAAACTTCCAGTAAATG+AGG | + | chr3_2:79733584-79733603 | None:intergenic | 30.0% | |
| !! | TATTTTGAGCTTGAATTTCC+GGG | + | chr3_2:79733612-79733631 | None:intergenic | 30.0% |
| GGAAATTCAAGCTCAAAATA+AGG | - | chr3_2:79733612-79733631 | Msa0428760:CDS | 30.0% | |
| AGAAAGTTACCCTTTCATTA+AGG | - | chr3_2:79733717-79733736 | Msa0428760:CDS | 30.0% | |
| GAAAGTTACCCTTTCATTAA+GGG | - | chr3_2:79733718-79733737 | Msa0428760:CDS | 30.0% | |
| AGTAGTTTCCCTTAATGAAA+GGG | + | chr3_2:79733729-79733748 | None:intergenic | 30.0% | |
| TAGTAGTTTCCCTTAATGAA+AGG | + | chr3_2:79733730-79733749 | None:intergenic | 30.0% | |
| ATCTTCTTCTTGATCAAGAA+TGG | + | chr3_2:79733758-79733777 | None:intergenic | 30.0% | |
| CTCAGTTAAGTCAAAACTTT+AGG | - | chr3_2:79733860-79733879 | Msa0428760:CDS | 30.0% | |
| AGTTAAGTCAAAACTTTAGG+AGG | - | chr3_2:79733863-79733882 | Msa0428760:CDS | 30.0% | |
| !! | GGCACTGAAAAGTATTAGTA+TGG | - | chr3_2:79732833-79732852 | Msa0428760:CDS | 35.0% |
| ! | ACTTCATTTTCTACAACCTC+CGG | + | chr3_2:79733031-79733050 | None:intergenic | 35.0% |
| GGTTGTAGAAAATGAAGTCA+AGG | - | chr3_2:79733033-79733052 | Msa0428760:CDS | 35.0% | |
| GAAGTCAAGGACATTAAGAA+AGG | - | chr3_2:79733046-79733065 | Msa0428760:CDS | 35.0% | |
| AAGTTGCAAATCAAACAGCA+TGG | - | chr3_2:79733093-79733112 | Msa0428760:CDS | 35.0% | |
| ! | ATCAAACAGCATGGTCTTAA+AGG | - | chr3_2:79733102-79733121 | Msa0428760:CDS | 35.0% |
| ACCATCTAATATCGAATTCG+CGG | + | chr3_2:79733282-79733301 | None:intergenic | 35.0% | |
| GAATTCGATATTAGATGGTC+AGG | - | chr3_2:79733283-79733302 | Msa0428760:CDS | 35.0% | |
| TCCAATCACACCAAAAGAAA+TGG | - | chr3_2:79733306-79733325 | Msa0428760:CDS | 35.0% | |
| !! | TCCATTTCTTTTGGTGTGAT+TGG | + | chr3_2:79733310-79733329 | None:intergenic | 35.0% |
| TTGATTGAAGGAGATGGAAA+TGG | - | chr3_2:79733376-79733395 | Msa0428760:CDS | 35.0% | |
| TGATTGAAGGAGATGGAAAT+GGG | - | chr3_2:79733377-79733396 | Msa0428760:CDS | 35.0% | |
| ! | GACTTTCCCTTTTCATCTAA+AGG | + | chr3_2:79733436-79733455 | None:intergenic | 35.0% |
| TGATTGCTCCAATTGAATCT+TGG | + | chr3_2:79733533-79733552 | None:intergenic | 35.0% | |
| AGATTCAATTGGAGCAATCA+AGG | - | chr3_2:79733533-79733552 | Msa0428760:CDS | 35.0% | |
| !!! | TGCTTGTTTTAAGGAGTCAA+AGG | - | chr3_2:79733792-79733811 | Msa0428760:intron | 35.0% |
| ! | TAAGTCAAAACTTTAGGAGG+AGG | - | chr3_2:79733866-79733885 | Msa0428760:CDS | 35.0% |
| ! | GGATAAGAGAATAAGCCTTT+TGG | + | chr3_2:79733904-79733923 | None:intergenic | 35.0% |
| CTTATGTAGTTGGAAAGGAT+CGG | - | chr3_2:79734001-79734020 | Msa0428760:intron | 35.0% | |
| GACTACAGATCACAAAATCA+GGG | + | chr3_2:79734047-79734066 | None:intergenic | 35.0% | |
| AGACTACAGATCACAAAATC+AGG | + | chr3_2:79734048-79734067 | None:intergenic | 35.0% | |
| AGGATTGGAATTAGTGTTAC+TGG | + | chr3_2:79734088-79734107 | None:intergenic | 35.0% | |
| AAAAGGCAAGTGATTCTTGA+AGG | + | chr3_2:79734108-79734127 | None:intergenic | 35.0% | |
| AGGATTCCTTTCTGACTAAA+AGG | + | chr3_2:79734125-79734144 | None:intergenic | 35.0% | |
| !! | GGCACTGAAAAGTATTAGTA+TGG | - | chr3_2:79732833-79732852 | Msa0428760:CDS | 35.0% |
| ! | ACTTCATTTTCTACAACCTC+CGG | + | chr3_2:79733031-79733050 | None:intergenic | 35.0% |
| GGTTGTAGAAAATGAAGTCA+AGG | - | chr3_2:79733033-79733052 | Msa0428760:CDS | 35.0% | |
| GAAGTCAAGGACATTAAGAA+AGG | - | chr3_2:79733046-79733065 | Msa0428760:CDS | 35.0% | |
| AAGTTGCAAATCAAACAGCA+TGG | - | chr3_2:79733093-79733112 | Msa0428760:CDS | 35.0% | |
| ! | ATCAAACAGCATGGTCTTAA+AGG | - | chr3_2:79733102-79733121 | Msa0428760:CDS | 35.0% |
| ACCATCTAATATCGAATTCG+CGG | + | chr3_2:79733282-79733301 | None:intergenic | 35.0% | |
| GAATTCGATATTAGATGGTC+AGG | - | chr3_2:79733283-79733302 | Msa0428760:CDS | 35.0% | |
| TCCAATCACACCAAAAGAAA+TGG | - | chr3_2:79733306-79733325 | Msa0428760:CDS | 35.0% | |
| !! | TCCATTTCTTTTGGTGTGAT+TGG | + | chr3_2:79733310-79733329 | None:intergenic | 35.0% |
| TTGATTGAAGGAGATGGAAA+TGG | - | chr3_2:79733376-79733395 | Msa0428760:CDS | 35.0% | |
| TGATTGAAGGAGATGGAAAT+GGG | - | chr3_2:79733377-79733396 | Msa0428760:CDS | 35.0% | |
| ! | GACTTTCCCTTTTCATCTAA+AGG | + | chr3_2:79733436-79733455 | None:intergenic | 35.0% |
| TGATTGCTCCAATTGAATCT+TGG | + | chr3_2:79733533-79733552 | None:intergenic | 35.0% | |
| AGATTCAATTGGAGCAATCA+AGG | - | chr3_2:79733533-79733552 | Msa0428760:CDS | 35.0% | |
| !!! | TGCTTGTTTTAAGGAGTCAA+AGG | - | chr3_2:79733792-79733811 | Msa0428760:intron | 35.0% |
| ! | TAAGTCAAAACTTTAGGAGG+AGG | - | chr3_2:79733866-79733885 | Msa0428760:CDS | 35.0% |
| ! | GGATAAGAGAATAAGCCTTT+TGG | + | chr3_2:79733904-79733923 | None:intergenic | 35.0% |
| CTTATGTAGTTGGAAAGGAT+CGG | - | chr3_2:79734001-79734020 | Msa0428760:intron | 35.0% | |
| GACTACAGATCACAAAATCA+GGG | + | chr3_2:79734047-79734066 | None:intergenic | 35.0% | |
| AGACTACAGATCACAAAATC+AGG | + | chr3_2:79734048-79734067 | None:intergenic | 35.0% | |
| AGGATTGGAATTAGTGTTAC+TGG | + | chr3_2:79734088-79734107 | None:intergenic | 35.0% | |
| AAAAGGCAAGTGATTCTTGA+AGG | + | chr3_2:79734108-79734127 | None:intergenic | 35.0% | |
| AGGATTCCTTTCTGACTAAA+AGG | + | chr3_2:79734125-79734144 | None:intergenic | 35.0% | |
| TAGTATGGGAACAAATAGCC+AGG | - | chr3_2:79732848-79732867 | Msa0428760:CDS | 40.0% | |
| ! | TAGCCAGGAGCATGAAATTT+CGG | - | chr3_2:79732863-79732882 | Msa0428760:CDS | 40.0% |
| ATGTTAGGTAACATATCCGG+AGG | - | chr3_2:79733012-79733031 | Msa0428760:CDS | 40.0% | |
| TCCGCGAATTCGATATTAGA+TGG | - | chr3_2:79733278-79733297 | Msa0428760:CDS | 40.0% | |
| ! | TCAAGGTTGATTGAAGGAGA+TGG | - | chr3_2:79733370-79733389 | Msa0428760:CDS | 40.0% |
| AAAAGGGAAAGTCACCAAGA+GGG | - | chr3_2:79733443-79733462 | Msa0428760:CDS | 40.0% | |
| !! | GAAGAAGAATCTCTAGGACT+AGG | + | chr3_2:79733472-79733491 | None:intergenic | 40.0% |
| TAGTCTACCTGAATCTGACA+GGG | - | chr3_2:79733507-79733526 | Msa0428760:CDS | 40.0% | |
| TGGAAGTTTCATATCGATCC+CGG | - | chr3_2:79733591-79733610 | Msa0428760:CDS | 40.0% | |
| CTACAAGGATGCTATGATGT+TGG | - | chr3_2:79733690-79733709 | Msa0428760:CDS | 40.0% | |
| AAGGATGCTATGATGTTGGT+AGG | - | chr3_2:79733694-79733713 | Msa0428760:CDS | 40.0% | |
| TGGTTGGACTTGAGGATTAA+AGG | - | chr3_2:79733835-79733854 | Msa0428760:intron | 40.0% | |
| GGTTGGACTTGAGGATTAAA+GGG | - | chr3_2:79733836-79733855 | Msa0428760:intron | 40.0% | |
| AGGTGTAAGATCAGTCCAAA+AGG | - | chr3_2:79733886-79733905 | Msa0428760:CDS | 40.0% | |
| ATGCTAGTGGAACAATGCAT+TGG | - | chr3_2:79733929-79733948 | Msa0428760:CDS | 40.0% | |
| CTTTCCAACTACATAAGCAG+AGG | + | chr3_2:79733998-79734017 | None:intergenic | 40.0% | |
| CTCTGCTTATGTAGTTGGAA+AGG | - | chr3_2:79733996-79734015 | Msa0428760:intron | 40.0% | |
| TACAGATCACAAAATCAGGG+CGG | + | chr3_2:79734044-79734063 | None:intergenic | 40.0% | |
| GCAAGTGATTCTTGAAGGAT+TGG | + | chr3_2:79734103-79734122 | None:intergenic | 40.0% | |
| ! | CACTTGCCTTTTAGTCAGAA+AGG | - | chr3_2:79734116-79734135 | Msa0428760:exon | 40.0% |
| TAGTATGGGAACAAATAGCC+AGG | - | chr3_2:79732848-79732867 | Msa0428760:CDS | 40.0% | |
| ! | TAGCCAGGAGCATGAAATTT+CGG | - | chr3_2:79732863-79732882 | Msa0428760:CDS | 40.0% |
| ATGTTAGGTAACATATCCGG+AGG | - | chr3_2:79733012-79733031 | Msa0428760:CDS | 40.0% | |
| TCCGCGAATTCGATATTAGA+TGG | - | chr3_2:79733278-79733297 | Msa0428760:CDS | 40.0% | |
| ! | TCAAGGTTGATTGAAGGAGA+TGG | - | chr3_2:79733370-79733389 | Msa0428760:CDS | 40.0% |
| AAAAGGGAAAGTCACCAAGA+GGG | - | chr3_2:79733443-79733462 | Msa0428760:CDS | 40.0% | |
| !! | GAAGAAGAATCTCTAGGACT+AGG | + | chr3_2:79733472-79733491 | None:intergenic | 40.0% |
| TAGTCTACCTGAATCTGACA+GGG | - | chr3_2:79733507-79733526 | Msa0428760:CDS | 40.0% | |
| TGGAAGTTTCATATCGATCC+CGG | - | chr3_2:79733591-79733610 | Msa0428760:CDS | 40.0% | |
| CTACAAGGATGCTATGATGT+TGG | - | chr3_2:79733690-79733709 | Msa0428760:CDS | 40.0% | |
| AAGGATGCTATGATGTTGGT+AGG | - | chr3_2:79733694-79733713 | Msa0428760:CDS | 40.0% | |
| TGGTTGGACTTGAGGATTAA+AGG | - | chr3_2:79733835-79733854 | Msa0428760:intron | 40.0% | |
| GGTTGGACTTGAGGATTAAA+GGG | - | chr3_2:79733836-79733855 | Msa0428760:intron | 40.0% | |
| AGGTGTAAGATCAGTCCAAA+AGG | - | chr3_2:79733886-79733905 | Msa0428760:CDS | 40.0% | |
| ATGCTAGTGGAACAATGCAT+TGG | - | chr3_2:79733929-79733948 | Msa0428760:CDS | 40.0% | |
| CTTTCCAACTACATAAGCAG+AGG | + | chr3_2:79733998-79734017 | None:intergenic | 40.0% | |
| CTCTGCTTATGTAGTTGGAA+AGG | - | chr3_2:79733996-79734015 | Msa0428760:intron | 40.0% | |
| TACAGATCACAAAATCAGGG+CGG | + | chr3_2:79734044-79734063 | None:intergenic | 40.0% | |
| GCAAGTGATTCTTGAAGGAT+TGG | + | chr3_2:79734103-79734122 | None:intergenic | 40.0% | |
| ! | CACTTGCCTTTTAGTCAGAA+AGG | - | chr3_2:79734116-79734135 | Msa0428760:exon | 40.0% |
| CTTCCGAAATTTCATGCTCC+TGG | + | chr3_2:79732869-79732888 | None:intergenic | 45.0% | |
| GAGCATGAAATTTCGGAAGC+AGG | - | chr3_2:79732870-79732889 | Msa0428760:CDS | 45.0% | |
| AATTTCGGAAGCAGGATCTG+AGG | - | chr3_2:79732878-79732897 | Msa0428760:CDS | 45.0% | |
| GAAAAGGGAAAGTCACCAAG+AGG | - | chr3_2:79733442-79733461 | Msa0428760:CDS | 45.0% | |
| GTAGTCTACCTGAATCTGAC+AGG | - | chr3_2:79733506-79733525 | Msa0428760:CDS | 45.0% | |
| TGACAGGGCCAAGATTCAAT+TGG | - | chr3_2:79733522-79733541 | Msa0428760:CDS | 45.0% | |
| TACCTTGTTCTCTTCACTCC+AGG | - | chr3_2:79733667-79733686 | Msa0428760:CDS | 45.0% | |
| ATCATAGCATCCTTGTAGCC+TGG | + | chr3_2:79733688-79733707 | None:intergenic | 45.0% | |
| TTATCCCTGCACCAAAGACT+TGG | - | chr3_2:79733815-79733834 | Msa0428760:intron | 45.0% | |
| CTCAAGTCCAACCAAGTCTT+TGG | + | chr3_2:79733829-79733848 | None:intergenic | 45.0% | |
| ! | CAAAGACTTGGTTGGACTTG+AGG | - | chr3_2:79733827-79733846 | Msa0428760:intron | 45.0% |
| TCTTATCCAGCAGATGCTAG+TGG | - | chr3_2:79733916-79733935 | Msa0428760:CDS | 45.0% | |
| ATTGTTCCACTAGCATCTGC+TGG | + | chr3_2:79733925-79733944 | None:intergenic | 45.0% | |
| ATTGGATCTCAGAAGCTCAC+AGG | - | chr3_2:79733947-79733966 | Msa0428760:intron | 45.0% | |
| CAGAAGCTCACAGGAACAAT+TGG | - | chr3_2:79733956-79733975 | Msa0428760:intron | 45.0% | |
| GATGCCTCTGCTTATGTAGT+TGG | - | chr3_2:79733991-79734010 | Msa0428760:intron | 45.0% | |
| TGAAGCAGCTGATGTGTCAA+AGG | + | chr3_2:79734145-79734164 | None:intergenic | 45.0% | |
| CTTCCGAAATTTCATGCTCC+TGG | + | chr3_2:79732869-79732888 | None:intergenic | 45.0% | |
| GAGCATGAAATTTCGGAAGC+AGG | - | chr3_2:79732870-79732889 | Msa0428760:CDS | 45.0% | |
| AATTTCGGAAGCAGGATCTG+AGG | - | chr3_2:79732878-79732897 | Msa0428760:CDS | 45.0% | |
| GAAAAGGGAAAGTCACCAAG+AGG | - | chr3_2:79733442-79733461 | Msa0428760:CDS | 45.0% | |
| GTAGTCTACCTGAATCTGAC+AGG | - | chr3_2:79733506-79733525 | Msa0428760:CDS | 45.0% | |
| TGACAGGGCCAAGATTCAAT+TGG | - | chr3_2:79733522-79733541 | Msa0428760:CDS | 45.0% | |
| TACCTTGTTCTCTTCACTCC+AGG | - | chr3_2:79733667-79733686 | Msa0428760:CDS | 45.0% | |
| ATCATAGCATCCTTGTAGCC+TGG | + | chr3_2:79733688-79733707 | None:intergenic | 45.0% | |
| TTATCCCTGCACCAAAGACT+TGG | - | chr3_2:79733815-79733834 | Msa0428760:intron | 45.0% | |
| CTCAAGTCCAACCAAGTCTT+TGG | + | chr3_2:79733829-79733848 | None:intergenic | 45.0% | |
| ! | CAAAGACTTGGTTGGACTTG+AGG | - | chr3_2:79733827-79733846 | Msa0428760:intron | 45.0% |
| TCTTATCCAGCAGATGCTAG+TGG | - | chr3_2:79733916-79733935 | Msa0428760:CDS | 45.0% | |
| ATTGTTCCACTAGCATCTGC+TGG | + | chr3_2:79733925-79733944 | None:intergenic | 45.0% | |
| ATTGGATCTCAGAAGCTCAC+AGG | - | chr3_2:79733947-79733966 | Msa0428760:intron | 45.0% | |
| CAGAAGCTCACAGGAACAAT+TGG | - | chr3_2:79733956-79733975 | Msa0428760:intron | 45.0% | |
| GATGCCTCTGCTTATGTAGT+TGG | - | chr3_2:79733991-79734010 | Msa0428760:intron | 45.0% | |
| TGAAGCAGCTGATGTGTCAA+AGG | + | chr3_2:79734145-79734164 | None:intergenic | 45.0% | |
| GCTTCAGCTATGATGTGAGC+TGG | + | chr3_2:79733247-79733266 | None:intergenic | 50.0% | |
| ATCTTGGCCCTGTCAGATTC+AGG | + | chr3_2:79733517-79733536 | None:intergenic | 50.0% | |
| AGCCTGGAGTGAAGAGAACA+AGG | + | chr3_2:79733672-79733691 | None:intergenic | 50.0% | |
| TCTCTTCACTCCAGGCTACA+AGG | - | chr3_2:79733675-79733694 | Msa0428760:CDS | 50.0% | |
| ! | CCAACCAAGTCTTTGGTGCA+GGG | + | chr3_2:79733822-79733841 | None:intergenic | 50.0% |
| ! | TCCAACCAAGTCTTTGGTGC+AGG | + | chr3_2:79733823-79733842 | None:intergenic | 50.0% |
| CACATCAGCTGCTTCATCTC+AGG | - | chr3_2:79734149-79734168 | Msa0428760:five_prime_UTR | 50.0% | |
| GCTTCAGCTATGATGTGAGC+TGG | + | chr3_2:79733247-79733266 | None:intergenic | 50.0% | |
| ATCTTGGCCCTGTCAGATTC+AGG | + | chr3_2:79733517-79733536 | None:intergenic | 50.0% | |
| AGCCTGGAGTGAAGAGAACA+AGG | + | chr3_2:79733672-79733691 | None:intergenic | 50.0% | |
| TCTCTTCACTCCAGGCTACA+AGG | - | chr3_2:79733675-79733694 | Msa0428760:CDS | 50.0% | |
| ! | CCAACCAAGTCTTTGGTGCA+GGG | + | chr3_2:79733822-79733841 | None:intergenic | 50.0% |
| ! | TCCAACCAAGTCTTTGGTGC+AGG | + | chr3_2:79733823-79733842 | None:intergenic | 50.0% |
| CACATCAGCTGCTTCATCTC+AGG | - | chr3_2:79734149-79734168 | Msa0428760:five_prime_UTR | 50.0% | |
| CTAGGACTAGGAGTCCCTCT+TGG | + | chr3_2:79733460-79733479 | None:intergenic | 55.0% | |
| ! | CCCTGCACCAAAGACTTGGT+TGG | - | chr3_2:79733819-79733838 | Msa0428760:intron | 55.0% |
| CTAGGACTAGGAGTCCCTCT+TGG | + | chr3_2:79733460-79733479 | None:intergenic | 55.0% | |
| ! | CCCTGCACCAAAGACTTGGT+TGG | - | chr3_2:79733819-79733838 | Msa0428760:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 79732796 | 79734182 | 79732796 | ID=Msa0428760;Name=Msa0428760 |
| chr3_2 | mRNA | 79732796 | 79734182 | 79732796 | ID=Msa0428760-mRNA-1;Parent=Msa0428760;Name=Msa0428760-mRNA-1;_AED=0.04;_eAED=0.04;_QI=56|1|0.66|1|1|1|3|0|369 |
| chr3_2 | exon | 79732796 | 79733752 | 79732796 | ID=Msa0428760-mRNA-1:exon:21562;Parent=Msa0428760-mRNA-1 |
| chr3_2 | exon | 79733855 | 79733959 | 79733855 | ID=Msa0428760-mRNA-1:exon:21561;Parent=Msa0428760-mRNA-1 |
| chr3_2 | exon | 79734079 | 79734182 | 79734079 | ID=Msa0428760-mRNA-1:exon:21560;Parent=Msa0428760-mRNA-1 |
| chr3_2 | five_prime_UTR | 79734127 | 79734182 | 79734127 | ID=Msa0428760-mRNA-1:five_prime_utr;Parent=Msa0428760-mRNA-1 |
| chr3_2 | CDS | 79734079 | 79734126 | 79734079 | ID=Msa0428760-mRNA-1:cds;Parent=Msa0428760-mRNA-1 |
| chr3_2 | CDS | 79733855 | 79733959 | 79733855 | ID=Msa0428760-mRNA-1:cds;Parent=Msa0428760-mRNA-1 |
| chr3_2 | CDS | 79732796 | 79733752 | 79732796 | ID=Msa0428760-mRNA-1:cds;Parent=Msa0428760-mRNA-1 |
| Gene Sequence |
| Protein sequence |
