AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0079530


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0079530 MtrunA17_Chr1g0190751 88.966 145 7 2 1 142 1 139 1.53e-72 213
Msa0079530 MtrunA17_Chr7g0274161 70.707 99 24 2 49 142 46 144 5.88e-41 133
Msa0079530 MtrunA17_Chr1g0202801 40.260 77 45 1 51 127 75 150 7.65e-11 58.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0079530 AT5G28750.1 62.105 95 31 2 49 138 48 142 4.88e-36 121
Msa0079530 AT5G52440.1 52.083 48 23 0 62 109 85 132 4.18e-11 59.3

Find 48 sgRNAs with CRISPR-Local

Find 138 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACGCTTTGTGCTTCTGTTTC+TGG 0.042249 1_2:+57443208 None:intergenic
CCAACTTCGGGCAATTTCTT+AGG 0.195754 1_2:+57443107 None:intergenic
TCTGGTTCTGGTTCTGGTTC+TGG 0.213224 1_2:+57443232 None:intergenic
TCTGTTTCTGGTTCTGGTTC+TGG 0.213548 1_2:+57443220 None:intergenic
TCTGGTTCTGGTTCTGGTTC+TGG 0.213548 1_2:+57443226 None:intergenic
TGTGCTTCTGTTTCTGGTTC+TGG 0.214615 1_2:+57443214 None:intergenic
CATTATTGTCTTGATCTTCT+TGG 0.219177 1_2:+57442677 None:intergenic
GAAATTTCTTCAGTAGAATT+AGG 0.222712 1_2:+57442712 None:intergenic
CCCGAGCTTGTTGTTATTGC+AGG 0.253511 1_2:-57443152 Msa0079530:CDS
TTTGGTTTGATTCTATTTGC+TGG 0.281151 1_2:+57443380 None:intergenic
CGGTTGTTAGTTTGCGGATT+GGG 0.319646 1_2:+57443441 None:intergenic
GCCGATGCTGCGACCAACTT+CGG 0.342708 1_2:+57443094 None:intergenic
TTTACTTGCAACGCCTTCTT+CGG 0.349544 1_2:-57443185 Msa0079530:CDS
AAGTGATGTATTGTTAGAAT+TGG 0.354759 1_2:+57443268 None:intergenic
CCGATGCTGCGACCAACTTC+GGG 0.355688 1_2:+57443095 None:intergenic
TAAGAAGGATAAGGTGGAAT+AGG 0.383721 1_2:+57443295 None:intergenic
GTTAGAATTGGAAGCTAAGA+AGG 0.407354 1_2:+57443280 None:intergenic
GTGGAATAGGATGAAGAGAT+TGG 0.421445 1_2:+57443308 None:intergenic
GCGAATTAAAGAAGAAGAAA+GGG 0.424605 1_2:+57443340 None:intergenic
CTTCTTCTTTAATTCGCCCT+AGG 0.426973 1_2:-57443334 Msa0079530:CDS
CACCCACGGTTGTTAGTTTG+CGG 0.437480 1_2:+57443435 None:intergenic
GGCGAATTAAAGAAGAAGAA+AGG 0.452383 1_2:+57443339 None:intergenic
AACTGTCAAAAGCTTCCAAC+AGG 0.455252 1_2:-57443069 Msa0079530:intron
CCCGAAGTTGGTCGCAGCAT+CGG 0.463383 1_2:-57443095 Msa0079530:CDS
ACGGTTGTTAGTTTGCGGAT+TGG 0.466644 1_2:+57443440 None:intergenic
CCTAAGAAATTGCCCGAAGT+TGG 0.474122 1_2:-57443107 Msa0079530:CDS
ATTGGAAGCTAAGAAGGATA+AGG 0.493246 1_2:+57443286 None:intergenic
TTGTTAGTTTGCGGATTGGG+TGG 0.503181 1_2:+57443444 None:intergenic
TGTTAGTTTGCGGATTGGGT+GGG 0.510064 1_2:+57443445 None:intergenic
TGAAACCTTGTAGGCAGCAA+AGG 0.513076 1_2:-57442761 Msa0079530:intron
TGCAACGCCTTCTTCGGATT+AGG 0.521226 1_2:-57443179 Msa0079530:CDS
TTTCTTCTTCGTGGTAGTTG+AGG 0.532506 1_2:-57442520 Msa0079530:three_prime_UTR
TCCTGCAATAACAACAAGCT+CGG 0.534091 1_2:+57443151 None:intergenic
ATCAACAACTATTTCATGAA+AGG 0.538422 1_2:+57442385 None:intergenic
CAATAATGTTTCTAGTACAA+AGG 0.541741 1_2:-57442662 Msa0079530:CDS
ATGAAGAGATTGGAAGCCTA+GGG 0.550257 1_2:+57443318 None:intergenic
GATGAAGAGATTGGAAGCCT+AGG 0.550349 1_2:+57443317 None:intergenic
CCTGCAATAACAACAAGCTC+GGG 0.555493 1_2:+57443152 None:intergenic
AGGTAGTTAAAGAATAATTG+AGG 0.559563 1_2:-57442467 Msa0079530:three_prime_UTR
GGAAGCTAAGAAGGATAAGG+TGG 0.578078 1_2:+57443289 None:intergenic
GCTGGTTTCTGCTAAATGAG+TGG 0.591161 1_2:+57443398 None:intergenic
GGGCACGCCTAATCCGAAGA+AGG 0.614059 1_2:+57443172 None:intergenic
TGTTACAAGGAACATGCGGT+AGG 0.633411 1_2:-57442487 Msa0079530:three_prime_UTR
TTCTTAATAAAATTGTACCA+TGG 0.641755 1_2:-57442602 Msa0079530:three_prime_UTR
AATCCGCAAACTAACAACCG+TGG 0.641967 1_2:-57443438 Msa0079530:five_prime_UTR
ATCCGCAAACTAACAACCGT+GGG 0.642536 1_2:-57443437 Msa0079530:five_prime_UTR
GTTCTAAATGCATAACACCA+TGG 0.652008 1_2:+57442585 None:intergenic
ATAACAATTATCAACACCCA+CGG 0.688626 1_2:+57443421 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTCTTATTATCTAATTAA+CGG - chr1_2:57442922-57442941 Msa0079530:intron 10.0%
!!! TAAAATTGAAATTGTTTTAT+AGG - chr1_2:57443001-57443020 Msa0079530:intron 10.0%
!! ATTTCTTATTATCTAATTAA+CGG - chr1_2:57442922-57442941 Msa0079530:intron 10.0%
!!! TAAAATTGAAATTGTTTTAT+AGG - chr1_2:57443001-57443020 Msa0079530:intron 10.0%
!! AAATAGAATCAAACCAAAAA+TGG - chr1_2:57442514-57442533 Msa0079530:three_prime_UTR 20.0%
!!! GCAAATTTTTATTGTTTGTT+TGG - chr1_2:57443090-57443109 Msa0079530:CDS 20.0%
!! TTCTTAATAAAATTGTACCA+TGG - chr1_2:57443287-57443306 Msa0079530:CDS 20.0%
!! AAATAGAATCAAACCAAAAA+TGG - chr1_2:57442514-57442533 Msa0079530:three_prime_UTR 20.0%
!!! GCAAATTTTTATTGTTTGTT+TGG - chr1_2:57443090-57443109 Msa0079530:CDS 20.0%
!! TTCTTAATAAAATTGTACCA+TGG - chr1_2:57443287-57443306 Msa0079530:CDS 20.0%
! AAGTGATGTATTGTTAGAAT+TGG + chr1_2:57442624-57442643 None:intergenic 25.0%
! TTATCCTAAGAATGAGAAAA+TGG + chr1_2:57442848-57442867 None:intergenic 25.0%
!!! ATTAGATTTTGAAACCTTGT+AGG - chr1_2:57443119-57443138 Msa0079530:CDS 25.0%
!!! ATTAGGTTCCTTTTTTAACT+CGG + chr1_2:57443163-57443182 None:intergenic 25.0%
! GAAATTTCTTCAGTAGAATT+AGG + chr1_2:57443180-57443199 None:intergenic 25.0%
!!! CAATAATGTTTCTAGTACAA+AGG - chr1_2:57443227-57443246 Msa0079530:CDS 25.0%
! ATGTTCCTTGTAACAAAAAA+AGG + chr1_2:57443397-57443416 None:intergenic 25.0%
! AGGTAGTTAAAGAATAATTG+AGG - chr1_2:57443422-57443441 Msa0079530:five_prime_UTR 25.0%
! AAGTGATGTATTGTTAGAAT+TGG + chr1_2:57442624-57442643 None:intergenic 25.0%
! TTATCCTAAGAATGAGAAAA+TGG + chr1_2:57442848-57442867 None:intergenic 25.0%
!!! ATTAGATTTTGAAACCTTGT+AGG - chr1_2:57443119-57443138 Msa0079530:CDS 25.0%
!!! ATTAGGTTCCTTTTTTAACT+CGG + chr1_2:57443163-57443182 None:intergenic 25.0%
! GAAATTTCTTCAGTAGAATT+AGG + chr1_2:57443180-57443199 None:intergenic 25.0%
!!! CAATAATGTTTCTAGTACAA+AGG - chr1_2:57443227-57443246 Msa0079530:CDS 25.0%
! ATGTTCCTTGTAACAAAAAA+AGG + chr1_2:57443397-57443416 None:intergenic 25.0%
! AGGTAGTTAAAGAATAATTG+AGG - chr1_2:57443422-57443441 Msa0079530:five_prime_UTR 25.0%
! ATTGTGTCAAGAGTTTTCAA+TGG + chr1_2:57442424-57442443 None:intergenic 30.0%
ATAACAATTATCAACACCCA+CGG + chr1_2:57442471-57442490 None:intergenic 30.0%
!! TTTGGTTTGATTCTATTTGC+TGG + chr1_2:57442512-57442531 None:intergenic 30.0%
GCGAATTAAAGAAGAAGAAA+GGG + chr1_2:57442552-57442571 None:intergenic 30.0%
!! ATTTGTTGTGCCTAACATAT+AGG - chr1_2:57442884-57442903 Msa0079530:intron 30.0%
ATGTAGAACTCCTATATGTT+AGG + chr1_2:57442897-57442916 None:intergenic 30.0%
TCATTCGTTGTATTTGAATG+AGG - chr1_2:57443045-57443064 Msa0079530:intron 30.0%
CATTATTGTCTTGATCTTCT+TGG + chr1_2:57443215-57443234 None:intergenic 30.0%
!!! TCTCTTATTTTTCTTCTTCG+TGG - chr1_2:57443360-57443379 Msa0079530:exon 30.0%
!!! AGGTACCTTTTTTTGTTACA+AGG - chr1_2:57443389-57443408 Msa0079530:five_prime_UTR 30.0%
! TTTTTGTTACAAGGAACATG+CGG - chr1_2:57443398-57443417 Msa0079530:five_prime_UTR 30.0%
AAAAAGCTTCGAATTGCTTT+AGG + chr1_2:57443455-57443474 None:intergenic 30.0%
! ATTGTGTCAAGAGTTTTCAA+TGG + chr1_2:57442424-57442443 None:intergenic 30.0%
ATAACAATTATCAACACCCA+CGG + chr1_2:57442471-57442490 None:intergenic 30.0%
!! TTTGGTTTGATTCTATTTGC+TGG + chr1_2:57442512-57442531 None:intergenic 30.0%
GCGAATTAAAGAAGAAGAAA+GGG + chr1_2:57442552-57442571 None:intergenic 30.0%
!! ATTTGTTGTGCCTAACATAT+AGG - chr1_2:57442884-57442903 Msa0079530:intron 30.0%
ATGTAGAACTCCTATATGTT+AGG + chr1_2:57442897-57442916 None:intergenic 30.0%
TCATTCGTTGTATTTGAATG+AGG - chr1_2:57443045-57443064 Msa0079530:intron 30.0%
CATTATTGTCTTGATCTTCT+TGG + chr1_2:57443215-57443234 None:intergenic 30.0%
!!! TCTCTTATTTTTCTTCTTCG+TGG - chr1_2:57443360-57443379 Msa0079530:exon 30.0%
!!! AGGTACCTTTTTTTGTTACA+AGG - chr1_2:57443389-57443408 Msa0079530:five_prime_UTR 30.0%
! TTTTTGTTACAAGGAACATG+CGG - chr1_2:57443398-57443417 Msa0079530:five_prime_UTR 30.0%
AAAAAGCTTCGAATTGCTTT+AGG + chr1_2:57443455-57443474 None:intergenic 30.0%
!!! GAAAGTGTTGTCTCCATTTT+TGG + chr1_2:57442530-57442549 None:intergenic 35.0%
GGCGAATTAAAGAAGAAGAA+AGG + chr1_2:57442553-57442572 None:intergenic 35.0%
TAAGAAGGATAAGGTGGAAT+AGG + chr1_2:57442597-57442616 None:intergenic 35.0%
ATTGGAAGCTAAGAAGGATA+AGG + chr1_2:57442606-57442625 None:intergenic 35.0%
GTTAGAATTGGAAGCTAAGA+AGG + chr1_2:57442612-57442631 None:intergenic 35.0%
AATGAGAAAATGGAACCTGT+TGG + chr1_2:57442838-57442857 None:intergenic 35.0%
! GGTTCCATTTTCTCATTCTT+AGG - chr1_2:57442841-57442860 Msa0079530:intron 35.0%
! GTTTGAGACCGAGTTAAAAA+AGG - chr1_2:57443152-57443171 Msa0079530:CDS 35.0%
! GTTCTAAATGCATAACACCA+TGG + chr1_2:57443307-57443326 None:intergenic 35.0%
!!! GAAAGTGTTGTCTCCATTTT+TGG + chr1_2:57442530-57442549 None:intergenic 35.0%
GGCGAATTAAAGAAGAAGAA+AGG + chr1_2:57442553-57442572 None:intergenic 35.0%
TAAGAAGGATAAGGTGGAAT+AGG + chr1_2:57442597-57442616 None:intergenic 35.0%
ATTGGAAGCTAAGAAGGATA+AGG + chr1_2:57442606-57442625 None:intergenic 35.0%
GTTAGAATTGGAAGCTAAGA+AGG + chr1_2:57442612-57442631 None:intergenic 35.0%
AATGAGAAAATGGAACCTGT+TGG + chr1_2:57442838-57442857 None:intergenic 35.0%
! GGTTCCATTTTCTCATTCTT+AGG - chr1_2:57442841-57442860 Msa0079530:intron 35.0%
! GTTTGAGACCGAGTTAAAAA+AGG - chr1_2:57443152-57443171 Msa0079530:CDS 35.0%
! GTTCTAAATGCATAACACCA+TGG + chr1_2:57443307-57443326 None:intergenic 35.0%
CTTCTTCTTTAATTCGCCCT+AGG - chr1_2:57442555-57442574 Msa0079530:three_prime_UTR 40.0%
ATGAAGAGATTGGAAGCCTA+GGG + chr1_2:57442574-57442593 None:intergenic 40.0%
GTGGAATAGGATGAAGAGAT+TGG + chr1_2:57442584-57442603 None:intergenic 40.0%
TTTACTTGCAACGCCTTCTT+CGG - chr1_2:57442704-57442723 Msa0079530:CDS 40.0%
TCCTGCAATAACAACAAGCT+CGG + chr1_2:57442741-57442760 None:intergenic 40.0%
AACTGTCAAAAGCTTCCAAC+AGG - chr1_2:57442820-57442839 Msa0079530:intron 40.0%
TTTCTTCTTCGTGGTAGTTG+AGG - chr1_2:57443369-57443388 Msa0079530:exon 40.0%
CTTCTTCTTTAATTCGCCCT+AGG - chr1_2:57442555-57442574 Msa0079530:three_prime_UTR 40.0%
ATGAAGAGATTGGAAGCCTA+GGG + chr1_2:57442574-57442593 None:intergenic 40.0%
GTGGAATAGGATGAAGAGAT+TGG + chr1_2:57442584-57442603 None:intergenic 40.0%
TTTACTTGCAACGCCTTCTT+CGG - chr1_2:57442704-57442723 Msa0079530:CDS 40.0%
TCCTGCAATAACAACAAGCT+CGG + chr1_2:57442741-57442760 None:intergenic 40.0%
AACTGTCAAAAGCTTCCAAC+AGG - chr1_2:57442820-57442839 Msa0079530:intron 40.0%
TTTCTTCTTCGTGGTAGTTG+AGG - chr1_2:57443369-57443388 Msa0079530:exon 40.0%
!! TGTTAGTTTGCGGATTGGGT+GGG + chr1_2:57442447-57442466 None:intergenic 45.0%
!! TTGTTAGTTTGCGGATTGGG+TGG + chr1_2:57442448-57442467 None:intergenic 45.0%
!! CGGTTGTTAGTTTGCGGATT+GGG + chr1_2:57442451-57442470 None:intergenic 45.0%
!! ACGGTTGTTAGTTTGCGGAT+TGG + chr1_2:57442452-57442471 None:intergenic 45.0%
AATCCGCAAACTAACAACCG+TGG - chr1_2:57442451-57442470 Msa0079530:three_prime_UTR 45.0%
ATCCGCAAACTAACAACCGT+GGG - chr1_2:57442452-57442471 Msa0079530:three_prime_UTR 45.0%
! GCTGGTTTCTGCTAAATGAG+TGG + chr1_2:57442494-57442513 None:intergenic 45.0%
GATGAAGAGATTGGAAGCCT+AGG + chr1_2:57442575-57442594 None:intergenic 45.0%
GGAAGCTAAGAAGGATAAGG+TGG + chr1_2:57442603-57442622 None:intergenic 45.0%
!! TCTGTTTCTGGTTCTGGTTC+TGG + chr1_2:57442672-57442691 None:intergenic 45.0%
!! TGTGCTTCTGTTTCTGGTTC+TGG + chr1_2:57442678-57442697 None:intergenic 45.0%
ACGCTTTGTGCTTCTGTTTC+TGG + chr1_2:57442684-57442703 None:intergenic 45.0%
CCTGCAATAACAACAAGCTC+GGG + chr1_2:57442740-57442759 None:intergenic 45.0%
CCAACTTCGGGCAATTTCTT+AGG + chr1_2:57442785-57442804 None:intergenic 45.0%
CCTAAGAAATTGCCCGAAGT+TGG - chr1_2:57442782-57442801 Msa0079530:intron 45.0%
TGAAACCTTGTAGGCAGCAA+AGG - chr1_2:57443128-57443147 Msa0079530:CDS 45.0%
AAACTCCTTTGCTGCCTACA+AGG + chr1_2:57443136-57443155 None:intergenic 45.0%
TGTTACAAGGAACATGCGGT+AGG - chr1_2:57443402-57443421 Msa0079530:five_prime_UTR 45.0%
!! TGTTAGTTTGCGGATTGGGT+GGG + chr1_2:57442447-57442466 None:intergenic 45.0%
!! TTGTTAGTTTGCGGATTGGG+TGG + chr1_2:57442448-57442467 None:intergenic 45.0%
!! CGGTTGTTAGTTTGCGGATT+GGG + chr1_2:57442451-57442470 None:intergenic 45.0%
!! ACGGTTGTTAGTTTGCGGAT+TGG + chr1_2:57442452-57442471 None:intergenic 45.0%
AATCCGCAAACTAACAACCG+TGG - chr1_2:57442451-57442470 Msa0079530:three_prime_UTR 45.0%
ATCCGCAAACTAACAACCGT+GGG - chr1_2:57442452-57442471 Msa0079530:three_prime_UTR 45.0%
! GCTGGTTTCTGCTAAATGAG+TGG + chr1_2:57442494-57442513 None:intergenic 45.0%
GATGAAGAGATTGGAAGCCT+AGG + chr1_2:57442575-57442594 None:intergenic 45.0%
GGAAGCTAAGAAGGATAAGG+TGG + chr1_2:57442603-57442622 None:intergenic 45.0%
!! TCTGTTTCTGGTTCTGGTTC+TGG + chr1_2:57442672-57442691 None:intergenic 45.0%
!! TGTGCTTCTGTTTCTGGTTC+TGG + chr1_2:57442678-57442697 None:intergenic 45.0%
ACGCTTTGTGCTTCTGTTTC+TGG + chr1_2:57442684-57442703 None:intergenic 45.0%
CCTGCAATAACAACAAGCTC+GGG + chr1_2:57442740-57442759 None:intergenic 45.0%
CCAACTTCGGGCAATTTCTT+AGG + chr1_2:57442785-57442804 None:intergenic 45.0%
CCTAAGAAATTGCCCGAAGT+TGG - chr1_2:57442782-57442801 Msa0079530:intron 45.0%
TGAAACCTTGTAGGCAGCAA+AGG - chr1_2:57443128-57443147 Msa0079530:CDS 45.0%
AAACTCCTTTGCTGCCTACA+AGG + chr1_2:57443136-57443155 None:intergenic 45.0%
TGTTACAAGGAACATGCGGT+AGG - chr1_2:57443402-57443421 Msa0079530:five_prime_UTR 45.0%
! CACCCACGGTTGTTAGTTTG+CGG + chr1_2:57442457-57442476 None:intergenic 50.0%
!! TCTGGTTCTGGTTCTGGTTC+TGG + chr1_2:57442660-57442679 None:intergenic 50.0%
!! TCTGGTTCTGGTTCTGGTTC+TGG + chr1_2:57442660-57442679 None:intergenic 50.0%
TGCAACGCCTTCTTCGGATT+AGG - chr1_2:57442710-57442729 Msa0079530:CDS 50.0%
!! CCCGAGCTTGTTGTTATTGC+AGG - chr1_2:57442737-57442756 Msa0079530:CDS 50.0%
!!! GGAGTCGCTGCTCTTGTTTT+CGG - chr1_2:57442758-57442777 Msa0079530:intron 50.0%
! CACCCACGGTTGTTAGTTTG+CGG + chr1_2:57442457-57442476 None:intergenic 50.0%
!! TCTGGTTCTGGTTCTGGTTC+TGG + chr1_2:57442660-57442679 None:intergenic 50.0%
!! TCTGGTTCTGGTTCTGGTTC+TGG + chr1_2:57442660-57442679 None:intergenic 50.0%
TGCAACGCCTTCTTCGGATT+AGG - chr1_2:57442710-57442729 Msa0079530:CDS 50.0%
!! CCCGAGCTTGTTGTTATTGC+AGG - chr1_2:57442737-57442756 Msa0079530:CDS 50.0%
!!! GGAGTCGCTGCTCTTGTTTT+CGG - chr1_2:57442758-57442777 Msa0079530:intron 50.0%
GGGCACGCCTAATCCGAAGA+AGG + chr1_2:57442720-57442739 None:intergenic 60.0%
CCGATGCTGCGACCAACTTC+GGG + chr1_2:57442797-57442816 None:intergenic 60.0%
! CCCGAAGTTGGTCGCAGCAT+CGG - chr1_2:57442794-57442813 Msa0079530:intron 60.0%
GCCGATGCTGCGACCAACTT+CGG + chr1_2:57442798-57442817 None:intergenic 60.0%
GGGCACGCCTAATCCGAAGA+AGG + chr1_2:57442720-57442739 None:intergenic 60.0%
CCGATGCTGCGACCAACTTC+GGG + chr1_2:57442797-57442816 None:intergenic 60.0%
! CCCGAAGTTGGTCGCAGCAT+CGG - chr1_2:57442794-57442813 Msa0079530:intron 60.0%
GCCGATGCTGCGACCAACTT+CGG + chr1_2:57442798-57442817 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 57442396 57443515 57442396 ID=Msa0079530;Name=Msa0079530
chr1_2 mRNA 57442396 57443515 57442396 ID=Msa0079530-mRNA-1;Parent=Msa0079530;Name=Msa0079530-mRNA-1;_AED=0.01;_eAED=0.01;_QI=137|1|1|1|1|1|2|255|142
chr1_2 exon 57442396 57442770 57442396 ID=Msa0079530-mRNA-1:exon:18170;Parent=Msa0079530-mRNA-1
chr1_2 exon 57443070 57443515 57443070 ID=Msa0079530-mRNA-1:exon:18169;Parent=Msa0079530-mRNA-1
chr1_2 five_prime_UTR 57443379 57443515 57443379 ID=Msa0079530-mRNA-1:five_prime_utr;Parent=Msa0079530-mRNA-1
chr1_2 CDS 57443070 57443378 57443070 ID=Msa0079530-mRNA-1:cds;Parent=Msa0079530-mRNA-1
chr1_2 CDS 57442651 57442770 57442651 ID=Msa0079530-mRNA-1:cds;Parent=Msa0079530-mRNA-1
chr1_2 three_prime_UTR 57442396 57442650 57442396 ID=Msa0079530-mRNA-1:three_prime_utr;Parent=Msa0079530-mRNA-1
Gene Sequence

>Msa0079530

ATGGAGACAACACTTTCCCTTTCTTCTTCTTTAATTCGCCCTAGGCTTCCAATCTCTTCATCCTATTCCACCTTATCCTTCTTAGCTTCCAATTCTAACAATACATCACTTCTCTTGAAGAAAGCCAGAACCAGAACCAGAACCAGAACCAGAAACAGAAGCACAAAGCGTTTTACTTGCAACGCCTTCTTCGGATTAGGCGTGCCCGAGCTTGTTGTTATTGCAGGAGTCGCTGCTCTTGTTTTCGGTCCTAAGAAATTGCCCGAAGTTGGTCGCAGCATCGGCAAAACTGTCAAAAGCTTCCAACAGGCAGCAAAGGAGTTTGAGACCGAGTTAAAAAAGGAACCTAATTCTACTGAAGAAATTTCTGTTGCGAATGACCAAGAAGATCAAGACAATAATGTTTCTAGTACAAAGGATAGTGTATGA

Protein sequence

>Msa0079530

METTLSLSSSLIRPRLPISSSYSTLSFLASNSNNTSLLLKKARTRTRTRTRNRSTKRFTCNAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGKTVKSFQQAAKEFETELKKEPNSTEEISVANDQEDQDNNVSSTKDSV*