AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1262320


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1262320 MtrunA17_Chr4g0063671 97.255 255 7 0 373 627 66 320 0.0 516
Msa1262320 MtrunA17_Chr4g0063691 68.627 306 86 6 1 296 225 530 1.23e-133 411
Msa1262320 MtrunA17_Chr4g0063691 81.707 82 15 0 276 357 738 819 1.11e-34 140
Msa1262320 MtrunA17_Chr2g0279061 59.922 257 102 1 371 627 11 266 8.82e-104 315
Msa1262320 MtrunA17_Chr2g0279041 59.608 255 102 1 373 627 72 325 2.85e-102 313
Msa1262320 MtrunA17_Chr2g0278671 44.156 308 160 5 324 627 24 323 1.40e-77 249
Msa1262320 MtrunA17_Chr4g0070951 44.068 295 145 7 342 627 46 329 3.51e-69 228
Msa1262320 MtrunA17_Chr7g0258811 41.137 299 160 7 339 627 79 371 1.18e-63 214
Msa1262320 MtrunA17_Chr2g0320071 41.176 306 156 7 327 627 31 317 1.76e-62 209
Msa1262320 MtrunA17_Chr2g0291751 42.361 288 146 7 348 627 55 330 2.08e-62 211
Msa1262320 MtrunA17_Chr2g0292211 42.748 262 138 5 373 627 85 341 5.97e-62 209
Msa1262320 MtrunA17_Chr1g0175561 39.933 298 157 7 341 627 40 326 8.61e-62 208
Msa1262320 MtrunA17_Chr2g0299691 42.857 287 145 6 349 627 83 358 1.05e-61 209
Msa1262320 MtrunA17_Chr2g0320101 41.176 306 156 7 327 627 31 317 1.32e-61 207
Msa1262320 MtrunA17_Chr2g0292251 43.130 262 135 6 374 627 74 329 3.53e-61 207
Msa1262320 MtrunA17_Chr2g0292181 38.689 305 168 8 330 627 47 339 2.72e-60 205
Msa1262320 MtrunA17_Chr5g0405991 40.989 283 147 7 349 627 50 316 5.06e-60 203
Msa1262320 MtrunA17_Chr2g0292091 39.203 301 162 8 337 627 36 325 1.53e-59 202
Msa1262320 MtrunA17_Chr2g0322861 41.935 279 148 6 353 627 118 386 1.89e-59 204
Msa1262320 MtrunA17_Chr5g0402571 40.141 284 154 5 349 627 54 326 3.30e-59 201
Msa1262320 MtrunA17_Chr2g0292241 41.825 263 139 6 373 627 74 330 5.97e-59 201
Msa1262320 MtrunA17_Chr4g0024121 38.983 295 169 5 339 627 37 326 6.62e-59 200
Msa1262320 MtrunA17_Chr5g0402581 39.667 300 162 6 336 627 38 326 7.27e-59 200
Msa1262320 MtrunA17_Chr2g0292271 42.366 262 139 6 373 627 74 330 1.01e-58 201
Msa1262320 MtrunA17_Chr6g0477071 34.021 388 205 10 245 627 1 342 1.31e-58 200
Msa1262320 MtrunA17_Chr7g0268501 40.780 282 147 6 351 627 54 320 9.52e-58 197
Msa1262320 MtrunA17_Chr7g0268521 40.780 282 147 6 351 627 54 320 9.52e-58 197
Msa1262320 MtrunA17_Chr2g0292151 38.284 303 162 7 339 627 39 330 1.14e-57 198
Msa1262320 MtrunA17_Chr2g0292261 39.344 305 166 8 330 627 38 330 1.66e-57 197
Msa1262320 MtrunA17_Chr2g0292101 36.086 327 180 9 323 627 7 326 8.96e-57 195
Msa1262320 MtrunA17_Chr2g0292111 40.357 280 151 6 354 627 61 330 1.40e-56 195
Msa1262320 MtrunA17_Chr5g0438021 40.559 286 145 8 349 627 58 325 2.09e-56 193
Msa1262320 MtrunA17_Chr3g0129051 39.860 286 147 8 349 627 55 322 2.25e-56 193
Msa1262320 MtrunA17_Chr2g0320061 40.702 285 145 7 349 627 52 318 2.69e-56 193
Msa1262320 MtrunA17_Chr2g0320051 41.404 285 143 7 349 627 52 318 6.97e-56 192
Msa1262320 MtrunA17_Chr8g0371381 40.070 287 144 7 349 627 53 319 7.71e-56 192
Msa1262320 MtrunA17_Chr1g0157051 41.961 255 135 5 373 623 69 314 1.01e-55 191
Msa1262320 MtrunA17_Chr3g0128061 43.295 261 137 6 373 627 71 326 1.68e-55 191
Msa1262320 MtrunA17_Chr7g0254201 40.794 277 145 6 354 627 52 312 4.17e-55 190
Msa1262320 MtrunA17_Chr7g0225221 40.214 281 148 6 352 627 55 320 7.38e-55 189
Msa1262320 MtrunA17_Chr5g0404721 39.189 296 168 7 339 627 40 330 8.03e-55 189
Msa1262320 MtrunA17_Chr1g0213061 39.145 304 159 9 327 623 33 317 1.02e-54 189
Msa1262320 MtrunA17_Chr4g0013201 39.437 284 149 6 349 627 73 338 1.27e-54 189
Msa1262320 MtrunA17_Chr1g0204011 41.085 258 142 4 373 627 72 322 1.93e-54 188
Msa1262320 MtrunA17_Chr2g0320091 41.053 285 144 7 349 627 52 318 2.81e-54 187
Msa1262320 MtrunA17_Chr2g0296621 40.625 256 142 3 373 627 95 341 3.44e-54 188
Msa1262320 MtrunA17_Chr7g0244451 38.328 287 154 6 346 627 48 316 8.28e-54 186
Msa1262320 MtrunA17_Chr1g0164891 37.421 318 169 10 325 627 90 392 1.07e-53 188
Msa1262320 MtrunA17_Chr2g0320031 38.408 289 154 7 345 627 49 319 1.17e-53 186
Msa1262320 MtrunA17_Chr4g0076211 39.927 273 154 4 357 627 69 333 1.33e-53 186
Msa1262320 MtrunA17_Chr4g0013191 37.294 303 168 8 330 627 55 340 1.91e-53 186
Msa1262320 MtrunA17_Chr7g0244461 38.028 284 153 6 349 627 47 312 8.52e-53 183
Msa1262320 MtrunA17_Chr6g0460711 42.912 261 135 6 371 627 64 314 2.30e-52 182
Msa1262320 MtrunA17_Chr3g0129041 41.608 286 142 8 349 627 55 322 3.32e-52 182
Msa1262320 MtrunA17_Chr3g0129061 40.909 286 144 8 349 627 55 322 3.53e-52 182
Msa1262320 MtrunA17_Chr2g0329641 39.286 280 152 6 354 627 68 335 3.62e-52 182
Msa1262320 MtrunA17_Chr8g0372601 39.189 296 168 7 339 627 40 330 4.04e-52 182
Msa1262320 MtrunA17_Chr1g0194151 39.456 294 158 7 343 627 51 333 8.86e-52 181
Msa1262320 MtrunA17_Chr4g0038161 38.235 306 163 9 330 627 33 320 9.07e-52 181
Msa1262320 MtrunA17_Chr3g0114451 37.459 307 167 7 328 627 30 318 1.78e-51 180
Msa1262320 MtrunA17_Chr1g0148021 36.700 297 167 7 341 627 43 328 1.86e-51 180
Msa1262320 MtrunA17_Chr3g0106921 37.255 306 165 9 330 627 34 320 2.04e-51 180
Msa1262320 MtrunA17_Chr8g0364291 40.989 283 149 6 352 627 53 324 2.59e-51 180
Msa1262320 MtrunA17_Chr4g0043391 39.583 288 148 9 349 627 54 324 3.42e-51 179
Msa1262320 MtrunA17_Chr4g0068621 38.176 296 169 7 339 627 48 336 5.64e-51 179
Msa1262320 MtrunA17_Chr4g0038171 38.111 307 163 10 330 627 33 321 6.53e-51 179
Msa1262320 MtrunA17_Chr1g0197411 37.456 283 163 6 354 627 53 330 8.57e-51 179
Msa1262320 MtrunA17_Chr4g0038151 36.928 306 167 9 330 627 34 321 9.45e-51 178
Msa1262320 MtrunA17_Chr5g0421411 37.884 293 159 10 346 627 5 285 1.94e-50 176
Msa1262320 MtrunA17_Chr2g0292291 39.924 263 145 7 373 627 75 332 3.96e-50 177
Msa1262320 MtrunA17_Chr4g0072091 38.790 281 156 5 352 627 54 323 7.11e-50 176
Msa1262320 MtrunA17_Chr5g0432441 36.806 288 155 7 349 627 57 326 1.07e-49 176
Msa1262320 MtrunA17_Chr4g0013171 38.811 286 150 7 349 627 54 321 2.65e-49 174
Msa1262320 MtrunA17_Chr2g0311251 35.032 314 158 8 354 625 29 338 3.29e-49 174
Msa1262320 MtrunA17_Chr2g0316791 32.530 332 178 6 330 626 85 405 3.30e-49 176
Msa1262320 MtrunA17_Chr1g0188431 35.690 297 165 6 337 627 51 327 4.30e-49 174
Msa1262320 MtrunA17_Chr4g0013181 38.112 286 152 7 349 627 86 353 6.66e-49 174
Msa1262320 MtrunA17_Chr2g0316481 32.831 332 177 6 330 626 85 405 2.10e-48 174
Msa1262320 MtrunA17_Chr2g0316831 33.535 331 174 7 330 625 121 440 2.17e-48 175
Msa1262320 MtrunA17_Chr1g0194271 39.927 273 139 7 373 627 75 340 4.37e-48 171
Msa1262320 MtrunA17_Chr5g0401431 39.231 260 145 5 373 624 72 326 5.04e-48 171
Msa1262320 MtrunA17_Chr4g0046131 40.283 283 148 7 352 624 72 343 5.18e-48 171
Msa1262320 MtrunA17_Chr7g0224371 37.037 297 162 9 336 627 46 322 5.65e-48 171
Msa1262320 MtrunA17_Chr2g0316191 31.832 333 180 6 330 626 85 406 7.99e-48 172
Msa1262320 MtrunA17_Chr7g0254231 39.568 278 144 7 354 627 54 311 1.50e-47 169
Msa1262320 MtrunA17_Chr4g0013821 36.304 303 173 8 330 627 37 324 4.31e-47 169
Msa1262320 MtrunA17_Chr4g0053871 37.413 286 152 8 350 624 52 321 5.63e-47 168
Msa1262320 MtrunA17_Chr4g0013721 36.393 305 170 8 330 627 109 396 9.13e-46 167
Msa1262320 MtrunA17_Chr5g0400331 37.374 297 160 9 344 627 48 331 1.29e-45 164
Msa1262320 MtrunA17_Chr1g0155611 38.047 297 171 7 339 627 56 347 1.87e-45 164
Msa1262320 MtrunA17_Chr6g0467121 39.300 257 142 5 373 627 119 363 2.99e-44 162
Msa1262320 MtrunA17_Chr3g0106901 38.028 284 153 6 349 627 58 323 3.18e-44 160
Msa1262320 MtrunA17_Chr2g0311241 32.317 328 143 8 373 625 105 428 3.94e-43 160
Msa1262320 MtrunA17_Chr5g0432351 35.762 302 162 11 339 627 39 321 1.37e-42 156
Msa1262320 MtrunA17_Chr5g0432331 36.093 302 161 11 339 627 70 352 8.22e-42 155
Msa1262320 MtrunA17_Chr5g0432341 36.986 292 155 10 346 627 49 321 3.21e-41 152
Msa1262320 MtrunA17_Chr3g0136751 36.331 278 162 6 357 627 53 322 2.90e-40 149
Msa1262320 MtrunA17_Chr3g0107881 36.986 292 156 9 346 627 51 324 1.31e-39 147
Msa1262320 MtrunA17_Chr4g0004591 37.657 239 122 6 408 625 122 354 2.10e-39 148
Msa1262320 MtrunA17_Chr6g0467161 34.495 287 164 8 347 627 68 336 3.24e-39 147
Msa1262320 MtrunA17_Chr6g0467251 33.333 303 174 8 328 623 43 324 1.33e-38 145
Msa1262320 MtrunA17_Chr4g0075241 36.882 263 149 7 373 627 74 327 1.83e-38 144
Msa1262320 MtrunA17_Chr5g0413051 35.789 285 160 9 354 627 105 377 6.14e-38 144
Msa1262320 MtrunA17_Chr4g0074851 33.574 277 166 6 359 627 62 328 1.45e-37 142
Msa1262320 MtrunA17_Chr2g0316141 30.796 289 142 6 374 626 11 277 2.35e-36 137
Msa1262320 MtrunA17_Chr2g0316181 30.796 289 142 6 374 626 11 277 2.35e-36 137
Msa1262320 MtrunA17_Chr6g0451571 35.206 267 153 7 371 627 78 334 4.73e-36 138
Msa1262320 MtrunA17_Chr2g0292281 38.140 215 115 6 416 627 17 216 7.51e-34 129
Msa1262320 MtrunA17_Chr1g0181511 29.831 295 182 7 342 627 45 323 2.20e-32 127
Msa1262320 MtrunA17_Chr1g0181481 31.154 260 162 6 375 627 74 323 3.54e-32 127
Msa1262320 MtrunA17_Chr1g0181431 31.818 264 163 6 371 627 70 323 7.76e-32 126
Msa1262320 MtrunA17_Chr2g0316811 34.821 224 118 6 330 532 59 275 2.06e-31 125
Msa1262320 MtrunA17_Chr5g0432401 30.333 300 138 13 339 625 43 284 1.54e-28 115
Msa1262320 MtrunA17_Chr4g0063701 29.236 301 196 9 4 296 229 520 8.68e-28 119
Msa1262320 MtrunA17_Chr4g0063701 50.000 76 36 1 282 357 731 804 3.34e-16 82.4
Msa1262320 MtrunA17_Chr3g0114461 35.052 194 112 4 436 627 11 192 3.59e-26 106
Msa1262320 MtrunA17_Chr7g0254181 47.619 105 53 1 385 489 20 122 4.18e-25 102
Msa1262320 MtrunA17_Chr6g0468731 65.574 61 21 0 373 433 28 88 2.03e-22 92.0
Msa1262320 MtrunA17_Chr8g0338501 28.105 306 178 15 33 315 269 555 1.89e-19 92.8
Msa1262320 MtrunA17_Chr8g0338471 27.027 296 173 14 43 315 249 524 5.73e-16 82.0
Msa1262320 MtrunA17_Chr1g0196191 59.016 61 22 1 374 431 31 91 1.98e-14 71.2
Msa1262320 MtrunA17_Chr5g0394381 28.814 177 109 6 47 216 244 410 2.04e-14 76.6
Msa1262320 MtrunA17_Chr5g0432321 37.903 124 68 3 445 567 17 132 2.26e-14 70.5
Msa1262320 MtrunA17_Chr1g0181501 27.692 195 126 5 437 627 6 189 5.95e-14 70.9
Msa1262320 MtrunA17_Chr3g0104101 31.690 142 85 6 488 623 10 145 6.41e-14 69.7
Msa1262320 MtrunA17_Chr1g0205561 28.378 148 97 4 76 216 13 158 9.72e-14 73.9
Msa1262320 MtrunA17_Chr3g0114491 40.909 110 53 4 328 431 22 125 9.76e-14 68.6
Msa1262320 MtrunA17_Chr7g0254171 33.824 136 80 3 373 501 3 135 1.50e-13 68.2
Msa1262320 MtrunA17_Chr2g0311551 43.478 69 38 1 290 357 947 1015 1.92e-11 67.4
Msa1262320 MtrunA17_Chr2g0311551 24.895 237 157 8 47 274 487 711 8.63e-11 65.5
Msa1262320 MtrunA17_Chr2g0311521 23.256 258 173 7 47 292 489 733 2.17e-11 67.4
Msa1262320 MtrunA17_Chr2g0311541 40.789 76 44 1 283 357 703 778 2.55e-11 67.0
Msa1262320 MtrunA17_Chr7g0237381 30.657 137 85 3 48 184 6 132 2.79e-11 62.4
Msa1262320 MtrunA17_Chr7g0237351 29.143 175 105 5 48 216 258 419 3.36e-11 66.6
Msa1262320 MtrunA17_Chr3g0106201 25.610 246 147 10 48 272 251 481 8.46e-11 65.1
Msa1262320 MtrunA17_Chr5g0399591 30.409 171 100 7 47 203 258 423 8.67e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1262320 AT2G41480.1 73.725 255 67 0 373 627 74 328 2.02e-137 404
Msa1262320 AT5G64120.1 56.420 257 102 3 373 627 80 328 1.70e-93 291
Msa1262320 AT5G39580.1 52.918 257 112 5 373 627 70 319 2.40e-86 272
Msa1262320 AT5G64110.1 52.308 260 111 3 373 627 79 330 3.59e-85 270
Msa1262320 AT4G25980.1 48.438 256 131 1 373 627 71 326 4.37e-81 259
Msa1262320 AT5G64100.1 52.756 254 115 3 374 627 83 331 7.50e-79 253
Msa1262320 AT5G17820.1 41.379 290 159 4 339 627 34 313 3.88e-67 222
Msa1262320 AT5G17820.2 41.379 290 159 4 339 627 87 366 1.67e-66 222
Msa1262320 AT5G19890.1 41.638 293 151 6 342 627 48 327 4.36e-64 214
Msa1262320 AT1G77100.1 45.736 258 130 4 373 627 69 319 5.26e-64 214
Msa1262320 AT1G05240.1 44.706 255 135 4 373 624 71 322 9.51e-64 213
Msa1262320 AT1G05250.1 44.706 255 135 4 373 624 71 322 9.51e-64 213
Msa1262320 AT5G06720.1 40.484 289 154 6 346 627 56 333 9.93e-63 211
Msa1262320 AT1G05260.1 44.444 279 141 6 353 627 57 325 2.32e-62 210
Msa1262320 AT5G06730.1 41.176 289 152 7 346 627 57 334 3.32e-61 207
Msa1262320 AT5G05340.1 42.509 287 138 8 349 627 57 324 3.33e-60 204
Msa1262320 AT3G01190.1 41.281 281 143 7 353 627 57 321 7.81e-60 203
Msa1262320 AT5G42180.1 39.456 294 154 7 336 625 42 315 1.09e-59 202
Msa1262320 AT3G21770.1 44.358 257 133 5 373 624 74 325 1.26e-58 200
Msa1262320 AT4G36430.1 39.803 304 165 8 330 627 39 330 5.47e-58 198
Msa1262320 AT4G11290.1 42.912 261 139 4 373 627 70 326 1.07e-57 197
Msa1262320 AT5G24070.1 40.441 272 145 4 361 627 76 335 1.78e-57 197
Msa1262320 AT1G49570.1 39.936 313 153 10 320 623 60 346 7.37e-57 196
Msa1262320 AT5G15180.1 41.313 259 142 5 373 627 77 329 5.82e-56 193
Msa1262320 AT1G14550.1 39.344 305 160 8 330 627 35 321 2.13e-55 191
Msa1262320 AT2G38390.1 39.643 280 155 7 357 627 59 333 3.67e-55 191
Msa1262320 AT5G19880.1 39.789 284 150 7 354 627 57 329 9.08e-55 189
Msa1262320 AT5G51890.1 39.373 287 162 5 339 620 36 315 1.80e-54 189
Msa1262320 AT4G37530.1 37.864 309 166 8 330 627 36 329 2.14e-54 189
Msa1262320 AT2G38380.1 40.000 280 154 7 357 627 59 333 3.06e-54 189
Msa1262320 AT4G33870.1 35.168 327 167 6 339 625 78 399 7.58e-54 189
Msa1262320 AT3G03670.1 41.637 281 143 6 354 627 55 321 1.45e-53 186
Msa1262320 AT2G18150.1 38.596 285 158 6 349 627 63 336 1.77e-53 186
Msa1262320 AT5G22410.1 41.634 257 138 5 372 623 72 321 2.41e-53 186
Msa1262320 AT4G08770.1 38.488 291 159 8 346 627 48 327 1.32e-52 184
Msa1262320 AT5G66390.1 38.929 280 154 6 354 627 65 333 2.51e-52 183
Msa1262320 AT2G18140.1 38.356 292 161 7 344 627 55 335 2.89e-52 183
Msa1262320 AT1G44970.1 39.145 304 172 6 332 627 48 346 3.13e-52 183
Msa1262320 AT3G50990.1 38.790 281 155 7 353 627 72 341 4.17e-52 183
Msa1262320 AT2G43480.1 39.623 265 146 5 368 627 80 335 4.44e-52 182
Msa1262320 AT1G14540.1 36.842 304 168 8 330 627 30 315 5.27e-52 182
Msa1262320 AT4G16270.1 39.527 296 165 7 339 627 60 348 1.58e-51 181
Msa1262320 AT4G08780.1 38.832 291 158 9 346 627 48 327 1.75e-51 181
Msa1262320 AT4G30170.1 40.569 281 150 7 352 627 57 325 2.76e-51 180
Msa1262320 AT3G32980.1 36.458 288 163 7 349 627 58 334 5.57e-51 180
Msa1262320 AT4G37520.1 36.242 298 168 7 341 627 43 329 2.26e-50 178
Msa1262320 AT1G68850.1 36.610 295 163 11 345 627 53 335 2.52e-50 178
Msa1262320 AT3G49110.1 37.367 281 161 7 357 627 61 336 6.21e-49 174
Msa1262320 AT2G18980.1 38.929 280 156 5 352 627 55 323 7.49e-49 173
Msa1262320 AT1G71695.1 38.511 309 157 11 334 627 49 339 8.23e-49 174
Msa1262320 AT5G58390.1 37.500 288 152 8 349 627 48 316 2.82e-48 172
Msa1262320 AT3G49120.1 33.235 340 182 10 317 627 12 335 6.95e-48 172
Msa1262320 AT5G67400.1 38.550 262 148 5 374 627 73 329 1.15e-47 170
Msa1262320 AT4G33420.1 36.111 288 161 5 343 627 58 325 1.27e-47 170
Msa1262320 AT5G14130.1 39.716 282 151 7 352 627 62 330 1.43e-47 170
Msa1262320 AT4G33420.2 34.740 308 177 6 323 627 86 372 1.86e-47 171
Msa1262320 AT4G26010.1 36.749 283 153 7 349 627 49 309 2.64e-47 169
Msa1262320 AT1G30870.1 38.628 277 155 4 353 627 82 345 2.69e-47 170
Msa1262320 AT4G26010.2 37.410 278 148 7 354 627 82 337 2.88e-47 169
Msa1262320 AT4G37520.2 35.570 298 167 8 341 627 43 326 3.91e-47 169
Msa1262320 AT5G14130.2 39.716 282 151 7 352 627 103 371 4.81e-47 170
Msa1262320 AT4G31760.1 37.452 259 152 4 373 627 74 326 1.23e-46 167
Msa1262320 AT2G24800.1 38.462 260 149 6 373 627 76 329 5.12e-46 166
Msa1262320 AT5G58400.1 37.294 303 161 9 336 627 41 325 9.04e-46 165
Msa1262320 AT2G39040.1 40.892 269 136 8 373 627 91 350 2.92e-45 164
Msa1262320 AT5G39580.2 59.200 125 51 0 373 497 70 194 2.15e-44 159
Msa1262320 AT2G22420.1 35.599 309 167 11 330 627 32 319 3.87e-44 160
Msa1262320 AT4G37530.2 37.500 256 139 7 330 574 36 281 8.15e-44 158
Msa1262320 AT4G17690.1 40.304 263 138 7 373 627 71 322 1.82e-43 159
Msa1262320 AT3G49960.1 34.951 309 175 8 330 627 36 329 2.42e-43 159
Msa1262320 AT5G47000.1 37.255 306 167 9 330 627 42 330 2.51e-42 156
Msa1262320 AT3G28200.1 38.596 285 147 9 352 627 51 316 8.76e-42 154
Msa1262320 AT2G34060.1 39.015 264 146 6 373 626 87 345 6.96e-41 152
Msa1262320 AT5G40150.1 37.456 283 154 7 352 627 62 328 3.11e-40 150
Msa1262320 AT1G24110.1 33.670 297 183 8 339 627 32 322 2.01e-39 147
Msa1262320 AT1G34510.1 34.532 278 156 7 354 627 54 309 2.92e-39 147
Msa1262320 AT2G35380.1 33.770 305 160 8 344 627 52 335 1.34e-38 145
Msa1262320 AT4G21960.1 33.213 277 167 6 359 627 61 327 3.44e-37 141
Msa1262320 AT2G35380.2 35.769 260 134 6 386 627 3 247 1.24e-36 137
Msa1262320 AT4G25980.2 50.420 119 58 1 373 490 116 234 6.74e-34 131
Msa1262320 AT3G17070.1 31.148 305 191 6 330 627 47 339 1.17e-32 129
Msa1262320 AT3G17070.2 33.333 261 162 4 374 627 21 276 1.48e-31 124
Msa1262320 AT2G37130.2 30.943 265 165 6 371 627 42 296 8.68e-29 117
Msa1262320 AT2G37130.1 30.943 265 165 6 371 627 73 327 1.79e-28 117
Msa1262320 AT2G24800.2 49.573 117 58 1 373 488 76 192 7.21e-27 110
Msa1262320 AT1G61480.1 25.664 226 127 10 54 270 258 451 5.69e-11 66.2

Find 149 sgRNAs with CRISPR-Local

Find 334 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGAAGCTCACATCAAATT+TGG 0.185710 8_2:+64971024 None:intergenic
TACAGGCTTCCACTTATTTA+TGG 0.212983 8_2:-64975046 Msa1262320:CDS
TCCATCGTGGACATAAAATA+TGG 0.237342 8_2:+64975148 None:intergenic
AATTGAGGTGGCCTGTCTTT+TGG 0.261469 8_2:+64970404 None:intergenic
TCTTGCTCTCAAAGTCAAAT+TGG 0.276729 8_2:+64975434 None:intergenic
CATGACCTTGTTACCTTAGT+TGG 0.310649 8_2:-64971376 Msa1262320:intron
ATTAAAATCTCGTTCCCTTC+AGG 0.323630 8_2:-64970433 Msa1262320:three_prime_UTR
AAGATTACATTCTTCATTGC+AGG 0.324079 8_2:+64973907 None:intergenic
AGATGTGGATTGGAAGATAT+TGG 0.333224 8_2:-64973983 Msa1262320:CDS
GTCATGATCATTTAGACCTT+TGG 0.338230 8_2:+64971393 None:intergenic
ATTAGTACTCTCAAGTGTTT+TGG 0.341319 8_2:-64970631 Msa1262320:three_prime_UTR
GTCAGCACATGATACAATTC+CGG 0.344053 8_2:+64971698 None:intergenic
CCTGTGGGTACTGGCCAACT+TGG 0.362353 8_2:+64971508 None:intergenic
AAAATGTACGCGATGGTAAC+GGG 0.363658 8_2:-64971000 Msa1262320:CDS
TTGGACATATTGCTTTAAGC+TGG 0.375950 8_2:+64971095 None:intergenic
TCAGCACATGATACAATTCC+GGG 0.378111 8_2:+64971699 None:intergenic
CGTGCAACACTTGATGTAGA+TGG 0.379938 8_2:-64975478 Msa1262320:CDS
TGGTTTGAGAAGGGTGGCTT+TGG 0.385896 8_2:-64971062 Msa1262320:CDS
AGAAGGGTAGTGGAAAATTA+TGG 0.391569 8_2:-64970935 Msa1262320:CDS
CTCAACTTAATCATAGCCTT+TGG 0.393832 8_2:+64970866 None:intergenic
CCCCACAATCACAATCTTGT+TGG 0.400370 8_2:+64975101 None:intergenic
AAGAAAGCTTGGTTTATAGT+AGG 0.408204 8_2:+64971121 None:intergenic
TTCAAAACACAAGGACCAAT+TGG 0.408530 8_2:+64970653 None:intergenic
ACATTCGTGTTGTTTGAGTT+TGG 0.411407 8_2:+64974947 None:intergenic
TCACCTTAAGAATATGTCTT+GGG 0.413244 8_2:-64975179 Msa1262320:CDS
CGAAATCCTTCTTTCCAGTT+GGG 0.413525 8_2:-64974061 Msa1262320:CDS
TGAGTTTGGAGGCGAAATAA+TGG 0.418227 8_2:+64974961 None:intergenic
TGATACAATTCCGGGGCATA+TGG 0.419332 8_2:+64971707 None:intergenic
TAAAGAACCTGCAATCTGTT+TGG 0.423931 8_2:+64971185 None:intergenic
GATGGATCCATATTGATTGC+AGG 0.427919 8_2:-64971813 Msa1262320:CDS
AGAGAACCCTGCAATCAATA+TGG 0.428990 8_2:+64971806 None:intergenic
CCATAGGCCAAACAGATTGC+AGG 0.434490 8_2:-64971192 Msa1262320:CDS
TTGAAGGTTTCATAACCAAT+TGG 0.440407 8_2:-64970668 Msa1262320:three_prime_UTR
CCTGCAATCTGTTTGGCCTA+TGG 0.440592 8_2:+64971192 None:intergenic
AAACCTCTTAGACCAAGGTT+TGG 0.444259 8_2:+64971765 None:intergenic
AGCTCGTGATGCTGTCGATT+TGG 0.444423 8_2:-64971661 Msa1262320:intron
AACTGAGACTGATATATTGA+AGG 0.445597 8_2:-64970684 Msa1262320:intron
TAATTCTGCATAGAAGAAAC+TGG 0.448348 8_2:-64973639 Msa1262320:intron
TCATTGCAGGACGGAGAGAT+TGG 0.448499 8_2:+64973920 None:intergenic
ACGGAAACTGTTATAAATAC+AGG 0.453541 8_2:-64975063 Msa1262320:CDS
CCACTCCCACAGGGCTGCGA+TGG 0.456071 8_2:-64971831 Msa1262320:intron
GGCGAAGAGAATCGTGGTGA+TGG 0.462693 8_2:-64975565 Msa1262320:CDS
AATGTAATCTTGATGTTGGA+AGG 0.465868 8_2:-64973895 Msa1262320:intron
TTACCAAACCTTGGTCTAAG+AGG 0.466873 8_2:-64971768 Msa1262320:CDS
CAGCTCAGCCTTAACATTCA+AGG 0.467953 8_2:-64975607 Msa1262320:CDS
CTCACCTTAAGAATATGTCT+TGG 0.468765 8_2:-64975180 Msa1262320:CDS
GAAATAATGGCGGTTGTTGA+AGG 0.469538 8_2:+64974974 None:intergenic
CAGAATCTTCCCACAGCCTC+TGG 0.471179 8_2:+64970963 None:intergenic
GATTCTCTTCGCCATGACTT+AGG 0.471260 8_2:+64975575 None:intergenic
CACCCCAAGACATATTCTTA+AGG 0.472054 8_2:+64975176 None:intergenic
TTAATTGATAAATCAAGAAA+AGG 0.472347 8_2:-64970787 Msa1262320:exon
GAAAGAAAGCATACCAACTA+AGG 0.472579 8_2:+64971363 None:intergenic
GCTGTCTGCAAATGTTATCC+TGG 0.474904 8_2:-64975307 Msa1262320:CDS
TAATGCAAAATCACAAATAG+AGG 0.476452 8_2:-64971730 Msa1262320:CDS
AAAGATGTCCTTGAATGTTA+AGG 0.477340 8_2:+64975599 None:intergenic
CAAGACTAAAAGCGTGCCTA+TGG 0.479806 8_2:-64975272 Msa1262320:CDS
TGAACTCTGCCATAAATAAG+TGG 0.481363 8_2:+64975037 None:intergenic
CTTGAATGTTAAGGCTGAGC+TGG 0.486049 8_2:+64975608 None:intergenic
TAAGCTGGGCTAAGAAAGCT+TGG 0.487188 8_2:+64971110 None:intergenic
TAGAGTCAGACCAGAGGCTG+TGG 0.488491 8_2:-64970973 Msa1262320:CDS
TGCCAACAAGATTGTGATTG+TGG 0.489431 8_2:-64975103 Msa1262320:CDS
CCATCGTGGACATAAAATAT+GGG 0.490325 8_2:+64975149 None:intergenic
TTCTGCTACAAGAAGGGTAG+TGG 0.492626 8_2:-64970945 Msa1262320:CDS
TTCGTGTTGTTTGAGTTTGG+AGG 0.493241 8_2:+64974950 None:intergenic
GATATACCCAACTGGAAAGA+AGG 0.494506 8_2:+64974055 None:intergenic
ACGAAATCCTTCTTTCCAGT+TGG 0.498446 8_2:-64974062 Msa1262320:CDS
TGGACATATTGCTTTAAGCT+GGG 0.499771 8_2:+64971096 None:intergenic
AAGCTCACATCAAATTTGGC+TGG 0.500486 8_2:+64971028 None:intergenic
TTGGAAGATATTGGAAAGAA+TGG 0.500670 8_2:-64973974 Msa1262320:CDS
TCAGGTCCGGTCCAAAAGAC+AGG 0.501751 8_2:-64970415 None:intergenic
TTGGAAAGAATGGTGAAGGT+GGG 0.502925 8_2:-64973964 Msa1262320:CDS
AATCTCGTTCCCTTCAGGTC+CGG 0.510200 8_2:-64970428 Msa1262320:three_prime_UTR
CGTGCCTATGGACTGTGTAC+AGG 0.511692 8_2:-64975260 Msa1262320:CDS
CTGTGGGTACTGGCCAACTT+GGG 0.513908 8_2:+64971509 None:intergenic
GATGTGAAGACTGGTATTGA+TGG 0.514291 8_2:-64970836 Msa1262320:CDS
GCCAACAAGATTGTGATTGT+GGG 0.515139 8_2:-64975102 Msa1262320:CDS
AAAACATTGATATACCCAAC+TGG 0.518866 8_2:+64974047 None:intergenic
GAATGGTGAAGGTGGGGTTG+TGG 0.519714 8_2:-64973957 Msa1262320:CDS
CATCACGAGCTGCCAATGCT+AGG 0.522152 8_2:+64971673 None:intergenic
CTATACAATTTCACAACCAC+TGG 0.523097 8_2:-64971154 Msa1262320:CDS
CTTCAAAACCTCTTAGACCA+AGG 0.526023 8_2:+64971760 None:intergenic
GTACCCACAGGAAGAAAAGA+TGG 0.532051 8_2:-64971496 Msa1262320:CDS
GAAGAATGTAATCTTGATGT+TGG 0.532429 8_2:-64973899 Msa1262320:CDS
TGGAGATGGTTTGAGAAGGG+TGG 0.539454 8_2:-64971068 Msa1262320:CDS
ATGATGAGAAAGATGTGGAT+TGG 0.539672 8_2:-64973993 Msa1262320:CDS
GTCTTGGAAGGGATGAAACC+AGG 0.542459 8_2:+64975289 None:intergenic
ATTGGAAAGAATGGTGAAGG+TGG 0.544766 8_2:-64973965 Msa1262320:CDS
CAAAACCCAGAGTAAAAGCT+AGG 0.547145 8_2:+64974882 None:intergenic
AAGTGGAGAAGGCAAGTTTG+AGG 0.547389 8_2:+64971450 None:intergenic
CAAATAGAGGCCATATGCCC+CGG 0.548083 8_2:-64971717 Msa1262320:CDS
AAATGGAGATGGTTTGAGAA+GGG 0.551257 8_2:-64971071 Msa1262320:CDS
ATGTGAAGACTGGTATTGAT+GGG 0.560319 8_2:-64970835 Msa1262320:CDS
GGGAAGATTCTGCTACAAGA+AGG 0.565073 8_2:-64970952 Msa1262320:CDS
AGCATCACCGCTCATGTTGG+AGG 0.565900 8_2:+64975327 None:intergenic
GCGAAGAGAATCGTGGTGAT+GGG 0.566418 8_2:-64975564 Msa1262320:CDS
ATGGATCCATATTGATTGCA+GGG 0.566998 8_2:-64971812 Msa1262320:CDS
TTGCAGGACGGAGAGATTGG+TGG 0.569699 8_2:+64973923 None:intergenic
GTGCAGATTGAAATCACCGC+GGG 0.570402 8_2:-64970581 Msa1262320:intron
TGGTGCAGCTGTTCCTCATG+TGG 0.571896 8_2:-64973619 Msa1262320:CDS
GACAGCATCACCGCTCATGT+TGG 0.574774 8_2:+64975324 None:intergenic
GAAACAGGTTCAAGTGGAGA+AGG 0.576067 8_2:+64971439 None:intergenic
CTGAGCTGGTGGTATGTCAT+CGG 0.576663 8_2:+64975622 None:intergenic
AGGGTAGTGGAAAATTATGG+TGG 0.580987 8_2:-64970932 Msa1262320:CDS
AATGATACATGTCAAGTGAA+GGG 0.581975 8_2:-64975376 Msa1262320:CDS
CCAAGTTGGCCAGTACCCAC+AGG 0.582195 8_2:-64971508 Msa1262320:CDS
GATATTGGAAAGAATGGTGA+AGG 0.583240 8_2:-64973968 Msa1262320:CDS
ATGATACATGTCAAGTGAAG+GGG 0.583724 8_2:-64975375 Msa1262320:CDS
AGTAGTGTAGATGTGAAGAC+TGG 0.587492 8_2:-64970845 Msa1262320:CDS
GACAGAGTGATGGCCCAAGT+TGG 0.588626 8_2:-64971522 Msa1262320:intron
TGTGAAGGTGCACATACCAT+AGG 0.589553 8_2:-64971208 Msa1262320:intron
TTGTTGTCAACAATAAGCTT+AGG 0.591153 8_2:+64974923 None:intergenic
AGGAATGCATTACCAAACCT+TGG 0.592827 8_2:-64971777 Msa1262320:CDS
ATGTGCTGACATCCTAGCAT+TGG 0.595121 8_2:-64971685 Msa1262320:CDS
TAATGATACATGTCAAGTGA+AGG 0.597241 8_2:-64975377 Msa1262320:CDS
CATCTACATCAAGTGTTGCA+CGG 0.600875 8_2:+64975479 None:intergenic
GGAAGATTCTGCTACAAGAA+GGG 0.607167 8_2:-64970951 Msa1262320:CDS
GGACATCTTTGCCTAAGTCA+TGG 0.609780 8_2:-64975586 Msa1262320:CDS
AAAATGGAGATGGTTTGAGA+AGG 0.611494 8_2:-64971072 Msa1262320:CDS
GGAGATGGAAACTTGTGAGA+AGG 0.612759 8_2:-64975128 Msa1262320:CDS
TGGACAGAAACAGGTTCAAG+TGG 0.615352 8_2:+64971433 None:intergenic
CCACAGGAAGAAAAGATGGA+AGG 0.624116 8_2:-64971492 Msa1262320:CDS
AGAGTCAGACCAGAGGCTGT+GGG 0.625853 8_2:-64970972 Msa1262320:CDS
CACCTTAAGAATATGTCTTG+GGG 0.628360 8_2:-64975178 Msa1262320:CDS
GGGTAGTGGAAAATTATGGT+GGG 0.632267 8_2:-64970931 Msa1262320:CDS
GAATGTTAAGGCTGAGCTGG+TGG 0.633513 8_2:+64975611 None:intergenic
CAGACATGATGAGAAAGATG+TGG 0.634370 8_2:-64973998 Msa1262320:CDS
TAAAAGAGCTACAGACAGAG+TGG 0.636182 8_2:+64975003 None:intergenic
TGGAAAGAATGGTGAAGGTG+GGG 0.637874 8_2:-64973963 Msa1262320:CDS
GCATACCAACTAAGGTAACA+AGG 0.639818 8_2:+64971371 None:intergenic
TGTGAAGACTGGTATTGATG+GGG 0.649530 8_2:-64970834 Msa1262320:CDS
TTACATTCTTCATTGCAGGA+CGG 0.658824 8_2:+64973911 None:intergenic
GAGTACTAATTCAAAACACA+AGG 0.659645 8_2:+64970644 None:intergenic
CATAAACTGAAAGCCACATG+AGG 0.660358 8_2:+64973606 None:intergenic
CCAACAAGATTGTGATTGTG+GGG 0.663286 8_2:-64975101 Msa1262320:CDS
AGTAGGATCAGCATTGCCAG+TGG 0.663872 8_2:+64971138 None:intergenic
GAGCAAGAATAGCTCGCGTG+TGG 0.664607 8_2:-64975419 Msa1262320:CDS
TATTGCTCCTCCAACATGAG+CGG 0.673310 8_2:-64975334 Msa1262320:CDS
CCGCGGGCTTGACAAAATCA+CGG 0.679385 8_2:-64970565 Msa1262320:three_prime_UTR
GTTTGGAGGCGAAATAATGG+CGG 0.680590 8_2:+64974964 None:intergenic
ACAAGTTTCCATCTCCATCG+TGG 0.681753 8_2:+64975135 None:intergenic
TGCGCCTGTACACAGTCCAT+AGG 0.688313 8_2:+64975256 None:intergenic
TTGCAGGGTTCTCTGCAGAG+AGG 0.693045 8_2:-64971797 Msa1262320:CDS
TCGTGAATATGACAGAGTGA+TGG 0.695486 8_2:-64971532 Msa1262320:intron
CAACAAGATTGTGATTGTGG+GGG 0.695771 8_2:-64975100 Msa1262320:CDS
AGTCATGGCGAAGAGAATCG+TGG 0.703061 8_2:-64975571 Msa1262320:CDS
GCTCGCGTGTGGTAATGTTG+TGG 0.709523 8_2:-64975408 Msa1262320:CDS
CAGCACATGATACAATTCCG+GGG 0.723417 8_2:+64971700 None:intergenic
GGATTCTAGAGTCAGACCAG+AGG 0.752589 8_2:-64970979 Msa1262320:CDS
GGTGCAGATTGAAATCACCG+CGG 0.788754 8_2:-64970582 Msa1262320:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTAATTAATTGAAAATTATT+AGG + chr8_2:64972947-64972966 None:intergenic 10.0%
!!! TTTTTCTCAATTATTTTATT+CGG + chr8_2:64973372-64973391 None:intergenic 10.0%
!!! TTTTAATTTTTAAACGAAAT+TGG - chr8_2:64974700-64974719 Msa1262320:intron 10.0%
!!! GGAATAATTATATTAGATTT+TGG + chr8_2:64972506-64972525 None:intergenic 15.0%
!! TAATTTATGATTGTTTCATT+TGG - chr8_2:64973172-64973191 Msa1262320:intron 15.0%
!!! TATGTTTTTCTTTTCTTTTT+TGG - chr8_2:64973892-64973911 Msa1262320:intron 15.0%
!!! ATGTTTTTCTTTTCTTTTTT+GGG - chr8_2:64973893-64973912 Msa1262320:intron 15.0%
!!! TATAGTTTTTTCTTTTACAA+AGG - chr8_2:64973923-64973942 Msa1262320:CDS 15.0%
!! TTAATTGATAAATCAAGAAA+AGG - chr8_2:64975248-64975267 Msa1262320:CDS 15.0%
!!! TTTATGAATTTTTCAGCAAA+GGG - chr8_2:64971554-64971573 Msa1262320:intron 20.0%
!! AAATCCTCATAATATACTTA+TGG - chr8_2:64971711-64971730 Msa1262320:CDS 20.0%
!!! TATTTAGCCATATTTTTAAC+AGG - chr8_2:64972725-64972744 Msa1262320:intron 20.0%
!! CATATAACCTGTTAAAAATA+TGG + chr8_2:64972735-64972754 None:intergenic 20.0%
!! CTTTCTTACAAAATTGTAAA+TGG + chr8_2:64972915-64972934 None:intergenic 20.0%
!!! TAATACATTTTTCAACTAAC+AGG + chr8_2:64973989-64974008 None:intergenic 20.0%
!! ATAAATGTATAGCAAATACT+AGG + chr8_2:64974779-64974798 None:intergenic 20.0%
!!! ATTTGATTTTGAATTTCCAA+AGG - chr8_2:64975153-64975172 Msa1262320:CDS 20.0%
!! ATTTCATTACGATATTGTTT+AGG + chr8_2:64975316-64975335 None:intergenic 20.0%
!!! TTTTGTTTCATTGATCTGTT+TGG - chr8_2:64971171-64971190 Msa1262320:CDS 25.0%
! CAATAAGCTTAACCAAATTT+CGG + chr8_2:64971501-64971520 None:intergenic 25.0%
!!! CTTATTGGTTTTTGTATAGA+AGG - chr8_2:64971514-64971533 Msa1262320:CDS 25.0%
!!! GTTTATGAATTTTTCAGCAA+AGG - chr8_2:64971553-64971572 Msa1262320:intron 25.0%
! TTATATTGCAATGGATGATT+CGG + chr8_2:64971693-64971712 None:intergenic 25.0%
! TATGAGGATTTATATTGCAA+TGG + chr8_2:64971702-64971721 None:intergenic 25.0%
! TCATCCATAAGTATATTATG+AGG + chr8_2:64971718-64971737 None:intergenic 25.0%
!!! TCCAAAATCAGATATTTTTG+CGG + chr8_2:64971749-64971768 None:intergenic 25.0%
! TTATGTTGAATTTACTGTTC+AGG - chr8_2:64972259-64972278 Msa1262320:intron 25.0%
! CTGTTATTAACAATTAAGAG+TGG - chr8_2:64972761-64972780 Msa1262320:intron 25.0%
! AACAATTAAGAGTGGAAATT+TGG - chr8_2:64972769-64972788 Msa1262320:intron 25.0%
!! ACAATTTTGTAAGAAAGTCA+TGG - chr8_2:64972918-64972937 Msa1262320:intron 25.0%
!! TTTTCTTAAGTTCATACTAG+AGG + chr8_2:64973129-64973148 None:intergenic 25.0%
!! CCAAATACATTTTCATAAAG+CGG + chr8_2:64973319-64973338 None:intergenic 25.0%
! TGAAAATGTATTTGGCTAAT+TGG - chr8_2:64973324-64973343 Msa1262320:intron 25.0%
!!! CAATTATTTTATTCGGAAAG+TGG + chr8_2:64973365-64973384 None:intergenic 25.0%
! TTGCTTGCACTTATATATAA+TGG + chr8_2:64973437-64973456 None:intergenic 25.0%
! ATTATATATAAGTGCAAGCA+AGG - chr8_2:64973436-64973455 Msa1262320:intron 25.0%
! TTATATATAAGTGCAAGCAA+GGG - chr8_2:64973437-64973456 Msa1262320:intron 25.0%
! GTTAAAATAAGATACAACTG+TGG + chr8_2:64973648-64973667 None:intergenic 25.0%
!!! TTTTAGCTTCAACAAAATCA+CGG + chr8_2:64973785-64973804 None:intergenic 25.0%
! TTAAAATTTGAATCTCCTTG+AGG - chr8_2:64973957-64973976 Msa1262320:CDS 25.0%
! TAAAATTTGAATCTCCTTGA+GGG - chr8_2:64973958-64973977 Msa1262320:CDS 25.0%
! GATATACTCGTATAGTTAAT+TGG + chr8_2:64974083-64974102 None:intergenic 25.0%
! TAATGCAAAATCACAAATAG+AGG - chr8_2:64974305-64974324 Msa1262320:intron 25.0%
! AAAGCAATATGTCCAAAAAA+TGG - chr8_2:64974947-64974966 Msa1262320:CDS 25.0%
AAAGATGTCCTTGAATGTTA+AGG + chr8_2:64970439-64970458 None:intergenic 30.0%
TAATGATACATGTCAAGTGA+AGG - chr8_2:64970658-64970677 Msa1262320:three_prime_UTR 30.0%
AATGATACATGTCAAGTGAA+GGG - chr8_2:64970659-64970678 Msa1262320:three_prime_UTR 30.0%
TCACCTTAAGAATATGTCTT+GGG - chr8_2:64970856-64970875 Msa1262320:CDS 30.0%
ACGGAAACTGTTATAAATAC+AGG - chr8_2:64970972-64970991 Msa1262320:CDS 30.0%
TTGTTGTCAACAATAAGCTT+AGG + chr8_2:64971115-64971134 None:intergenic 30.0%
! TCTTCATTTTCTTGACTTAC+AGG - chr8_2:64971203-64971222 Msa1262320:CDS 30.0%
CGAAATTTGGTTAAGCTTAT+TGG - chr8_2:64971499-64971518 Msa1262320:CDS 30.0%
TTCATAAACAAGAAGCTTCT+TGG + chr8_2:64971542-64971561 None:intergenic 30.0%
TTGCAAATCTTCTCTTTGAA+GGG - chr8_2:64971581-64971600 Msa1262320:intron 30.0%
AGATAGAATGAAACTTGCAT+TGG - chr8_2:64971624-64971643 Msa1262320:intron 30.0%
! ACCGCAAAAATATCTGATTT+TGG - chr8_2:64971745-64971764 Msa1262320:CDS 30.0%
!!! CCTGTTTTTTAGTTCTTGAA+TGG + chr8_2:64971795-64971814 None:intergenic 30.0%
CCATTCAAGAACTAAAAAAC+AGG - chr8_2:64971792-64971811 Msa1262320:CDS 30.0%
AGAACTAAAAAACAGGATGA+TGG - chr8_2:64971799-64971818 Msa1262320:CDS 30.0%
! AAAGCTGACATTTACAGTTT+TGG - chr8_2:64971877-64971896 Msa1262320:intron 30.0%
! AAGCTGACATTTACAGTTTT+GGG - chr8_2:64971878-64971897 Msa1262320:intron 30.0%
AAAACATTGATATACCCAAC+TGG + chr8_2:64971991-64972010 None:intergenic 30.0%
TTGGAAGATATTGGAAAGAA+TGG - chr8_2:64972061-64972080 Msa1262320:intron 30.0%
AAGATTACATTCTTCATTGC+AGG + chr8_2:64972131-64972150 None:intergenic 30.0%
GAAGAATGTAATCTTGATGT+TGG - chr8_2:64972136-64972155 Msa1262320:intron 30.0%
AATGTAATCTTGATGTTGGA+AGG - chr8_2:64972140-64972159 Msa1262320:intron 30.0%
TAATTCTGCATAGAAGAAAC+TGG - chr8_2:64972396-64972415 Msa1262320:intron 30.0%
!! TGTTTTTGTTTCAGTTGCTA+AGG - chr8_2:64972458-64972477 Msa1262320:intron 30.0%
AAGGTTGTATCTGTGTTATA+AGG - chr8_2:64972477-64972496 Msa1262320:intron 30.0%
TCTATTAACTATCAAGCACT+AGG + chr8_2:64972871-64972890 None:intergenic 30.0%
! TTTCAGTACTTTACTTGTTG+TGG + chr8_2:64972994-64973013 None:intergenic 30.0%
AAGAAAAAAGTTGTGCATCA+AGG - chr8_2:64973013-64973032 Msa1262320:intron 30.0%
AGAAAAAAGTTGTGCATCAA+GGG - chr8_2:64973014-64973033 Msa1262320:intron 30.0%
AGTTATCGAGATAAAACACA+GGG + chr8_2:64973228-64973247 None:intergenic 30.0%
AAGTTATCGAGATAAAACAC+AGG + chr8_2:64973229-64973248 None:intergenic 30.0%
CCGCTTTATGAAAATGTATT+TGG - chr8_2:64973316-64973335 Msa1262320:intron 30.0%
!! GAAAGTGGATTATAAGACAT+TGG + chr8_2:64973350-64973369 None:intergenic 30.0%
!!! ACTTCACACTTGGTTTTTTA+TGG + chr8_2:64973473-64973492 None:intergenic 30.0%
AGTCATAACCAAAATCACTA+GGG + chr8_2:64973552-64973571 None:intergenic 30.0%
AAGTCATAACCAAAATCACT+AGG + chr8_2:64973553-64973572 None:intergenic 30.0%
!!! AGTGATTTTGGTTATGACTT+TGG - chr8_2:64973553-64973572 Msa1262320:intron 30.0%
! ATAAAACCCAGTTTTCAGTT+GGG + chr8_2:64973588-64973607 None:intergenic 30.0%
! AATAAAACCCAGTTTTCAGT+TGG + chr8_2:64973589-64973608 None:intergenic 30.0%
! CATGTTTTATAGTGCATGTT+TGG + chr8_2:64973867-64973886 None:intergenic 30.0%
! CACACGTGTTAATTTTATCA+TGG + chr8_2:64974481-64974500 None:intergenic 30.0%
TTCACACAAATCAAGAGTTT+AGG + chr8_2:64974813-64974832 None:intergenic 30.0%
!! TAAACTCTTGATTTGTGTGA+AGG - chr8_2:64974812-64974831 Msa1262320:intron 30.0%
AAGAAAGCTTGGTTTATAGT+AGG + chr8_2:64974917-64974936 None:intergenic 30.0%
ATATGTCCAAAAAATGGAGA+TGG - chr8_2:64974953-64974972 Msa1262320:CDS 30.0%
!! AATTATGGTGGGAATTTTAG+AGG - chr8_2:64975115-64975134 Msa1262320:CDS 30.0%
!! ATTATGGTGGGAATTTTAGA+GGG - chr8_2:64975116-64975135 Msa1262320:CDS 30.0%
AATATATCAGTCTCAGTTTC+AGG + chr8_2:64975349-64975368 None:intergenic 30.0%
AACTGAGACTGATATATTGA+AGG - chr8_2:64975351-64975370 Msa1262320:CDS 30.0%
TTGAAGGTTTCATAACCAAT+TGG - chr8_2:64975367-64975386 Msa1262320:CDS 30.0%
GAGTACTAATTCAAAACACA+AGG + chr8_2:64975394-64975413 None:intergenic 30.0%
! ATTAGTACTCTCAAGTGTTT+TGG - chr8_2:64975404-64975423 Msa1262320:CDS 30.0%
TCTTGCTCTCAAAGTCAAAT+TGG + chr8_2:64970604-64970623 None:intergenic 35.0%
ATGATACATGTCAAGTGAAG+GGG - chr8_2:64970660-64970679 Msa1262320:three_prime_UTR 35.0%
CTCACCTTAAGAATATGTCT+TGG - chr8_2:64970855-64970874 Msa1262320:CDS 35.0%
CACCTTAAGAATATGTCTTG+GGG - chr8_2:64970857-64970876 Msa1262320:CDS 35.0%
CCATCGTGGACATAAAATAT+GGG + chr8_2:64970889-64970908 None:intergenic 35.0%
TCCATCGTGGACATAAAATA+TGG + chr8_2:64970890-64970909 None:intergenic 35.0%
TACAGGCTTCCACTTATTTA+TGG - chr8_2:64970989-64971008 Msa1262320:CDS 35.0%
TGAACTCTGCCATAAATAAG+TGG + chr8_2:64971001-64971020 None:intergenic 35.0%
!! ACATTCGTGTTGTTTGAGTT+TGG + chr8_2:64971091-64971110 None:intergenic 35.0%
!! AATGATCCTAGCTTTTACTC+TGG - chr8_2:64971147-64971166 Msa1262320:CDS 35.0%
!! ATGATCCTAGCTTTTACTCT+GGG - chr8_2:64971148-64971167 Msa1262320:CDS 35.0%
!! TCATTTGGTGCTGTTTATAG+AGG - chr8_2:64971361-64971380 Msa1262320:intron 35.0%
! GCTGTTTATAGAGGTACAAT+AGG - chr8_2:64971370-64971389 Msa1262320:intron 35.0%
GAATGACAGTAATTTCAGCT+CGG + chr8_2:64971465-64971484 None:intergenic 35.0%
CTTGCAAATCTTCTCTTTGA+AGG - chr8_2:64971580-64971599 Msa1262320:intron 35.0%
! TGCAAATCTTCTCTTTGAAG+GGG - chr8_2:64971582-64971601 Msa1262320:intron 35.0%
AATGAAACTTGCATTGGATG+TGG - chr8_2:64971630-64971649 Msa1262320:intron 35.0%
! TATCTGATTTTGGATTCGCA+AGG - chr8_2:64971755-64971774 Msa1262320:CDS 35.0%
! AGCTGACATTTACAGTTTTG+GGG - chr8_2:64971879-64971898 Msa1262320:intron 35.0%
! GTATATCAATGTTTTGCAGC+AGG - chr8_2:64971996-64972015 Msa1262320:intron 35.0%
ATGATGAGAAAGATGTGGAT+TGG - chr8_2:64972042-64972061 Msa1262320:intron 35.0%
!! AGATGTGGATTGGAAGATAT+TGG - chr8_2:64972052-64972071 Msa1262320:intron 35.0%
GATATTGGAAAGAATGGTGA+AGG - chr8_2:64972067-64972086 Msa1262320:intron 35.0%
TTACATTCTTCATTGCAGGA+CGG + chr8_2:64972127-64972146 None:intergenic 35.0%
ATAAATCCCTACAAGCAAAC+TGG + chr8_2:64972194-64972213 None:intergenic 35.0%
CAAGAATTGACATTGACATC+AGG + chr8_2:64972533-64972552 None:intergenic 35.0%
AAGAAGAGACAAAAGAGTGA+TGG - chr8_2:64973098-64973117 Msa1262320:intron 35.0%
AGAAGAGACAAAAGAGTGAT+GGG - chr8_2:64973099-64973118 Msa1262320:intron 35.0%
TCATAAAGCGGAGATATATG+TGG + chr8_2:64973307-64973326 None:intergenic 35.0%
TTAAGACACAACTTCACACT+TGG + chr8_2:64973483-64973502 None:intergenic 35.0%
TTAATGCCCAACTGAAAACT+GGG - chr8_2:64973579-64973598 Msa1262320:CDS 35.0%
TTACTTGGACAAAGCAATCA+TGG + chr8_2:64973712-64973731 None:intergenic 35.0%
AGACATACACTTAGCTTACT+TGG + chr8_2:64973727-64973746 None:intergenic 35.0%
AAGTAAGCTAAGTGTATGTC+TGG - chr8_2:64973726-64973745 Msa1262320:intron 35.0%
! ATGGATCCATATTGATTGCA+GGG - chr8_2:64974223-64974242 Msa1262320:intron 35.0%
GTCATGATCATTTAGACCTT+TGG + chr8_2:64974645-64974664 None:intergenic 35.0%
! GAAAGAAAGCATACCAACTA+AGG + chr8_2:64974675-64974694 None:intergenic 35.0%
TAAAGAACCTGCAATCTGTT+TGG + chr8_2:64974853-64974872 None:intergenic 35.0%
CTATACAATTTCACAACCAC+TGG - chr8_2:64974881-64974900 Msa1262320:CDS 35.0%
! TGGACATATTGCTTTAAGCT+GGG + chr8_2:64974942-64974961 None:intergenic 35.0%
! TTGGACATATTGCTTTAAGC+TGG + chr8_2:64974943-64974962 None:intergenic 35.0%
!!! CTCAAACCATCTCCATTTTT+TGG + chr8_2:64974962-64974981 None:intergenic 35.0%
AAAATGGAGATGGTTTGAGA+AGG - chr8_2:64974963-64974982 Msa1262320:CDS 35.0%
AAATGGAGATGGTTTGAGAA+GGG - chr8_2:64974964-64974983 Msa1262320:CDS 35.0%
GAAGAAGCTCACATCAAATT+TGG + chr8_2:64975014-64975033 None:intergenic 35.0%
TTCTTCAAAAATGTACGCGA+TGG - chr8_2:64975028-64975047 Msa1262320:CDS 35.0%
AAAAATGTACGCGATGGTAA+CGG - chr8_2:64975034-64975053 Msa1262320:CDS 35.0%
!! AGAAGGGTAGTGGAAAATTA+TGG - chr8_2:64975100-64975119 Msa1262320:CDS 35.0%
!! TGGGAATTTTAGAGGGTTAT+TGG - chr8_2:64975123-64975142 Msa1262320:CDS 35.0%
!! GGGAATTTTAGAGGGTTATT+GGG - chr8_2:64975124-64975143 Msa1262320:CDS 35.0%
!! GGAATTTTAGAGGGTTATTG+GGG - chr8_2:64975125-64975144 Msa1262320:CDS 35.0%
CTCAACTTAATCATAGCCTT+TGG + chr8_2:64975172-64975191 None:intergenic 35.0%
!! ATGTGAAGACTGGTATTGAT+GGG - chr8_2:64975200-64975219 Msa1262320:CDS 35.0%
TTCAAAACACAAGGACCAAT+TGG + chr8_2:64975385-64975404 None:intergenic 35.0%
ATTAAAATCTCGTTCCCTTC+AGG - chr8_2:64975602-64975621 Msa1262320:CDS 35.0%
! CATCTACATCAAGTGTTGCA+CGG + chr8_2:64970559-64970578 None:intergenic 40.0%
CACCCCAAGACATATTCTTA+AGG + chr8_2:64970862-64970881 None:intergenic 40.0%
! CCCATATTTTATGTCCACGA+TGG - chr8_2:64970886-64970905 Msa1262320:CDS 40.0%
! TTTTATGTCCACGATGGAGA+TGG - chr8_2:64970892-64970911 Msa1262320:CDS 40.0%
TGCCAACAAGATTGTGATTG+TGG - chr8_2:64970932-64970951 Msa1262320:CDS 40.0%
GCCAACAAGATTGTGATTGT+GGG - chr8_2:64970933-64970952 Msa1262320:CDS 40.0%
CCAACAAGATTGTGATTGTG+GGG - chr8_2:64970934-64970953 Msa1262320:CDS 40.0%
CAACAAGATTGTGATTGTGG+GGG - chr8_2:64970935-64970954 Msa1262320:CDS 40.0%
TAAAAGAGCTACAGACAGAG+TGG + chr8_2:64971035-64971054 None:intergenic 40.0%
GAAATAATGGCGGTTGTTGA+AGG + chr8_2:64971064-64971083 None:intergenic 40.0%
TGAGTTTGGAGGCGAAATAA+TGG + chr8_2:64971077-64971096 None:intergenic 40.0%
!! TTCGTGTTGTTTGAGTTTGG+AGG + chr8_2:64971088-64971107 None:intergenic 40.0%
CAAAACCCAGAGTAAAAGCT+AGG + chr8_2:64971156-64971175 None:intergenic 40.0%
ACGAACTTGCAAGATCAACT+GGG - chr8_2:64971311-64971330 Msa1262320:intron 40.0%
ACTGGAGGATAGAATTTCTG+AGG - chr8_2:64971423-64971442 Msa1262320:CDS 40.0%
! GAGGATAGAATTTCTGAGGA+AGG - chr8_2:64971427-64971446 Msa1262320:CDS 40.0%
AAATTTCGGTGATGAGTTCG+AGG + chr8_2:64971487-64971506 None:intergenic 40.0%
TCGAACTCATCACCGAAATT+TGG - chr8_2:64971486-64971505 Msa1262320:CDS 40.0%
TTCGCAAGGCTATTAAAGAG+AGG - chr8_2:64971769-64971788 Msa1262320:CDS 40.0%
!!! TGACATTTACAGTTTTGGGG+TGG - chr8_2:64971882-64971901 Msa1262320:intron 40.0%
! GGGTGGTAATGTGGTATTAT+TGG - chr8_2:64971899-64971918 Msa1262320:intron 40.0%
TCATCTCTATACTTCTCCTG+CGG + chr8_2:64971935-64971954 None:intergenic 40.0%
ACGAAATCCTTCTTTCCAGT+TGG - chr8_2:64971973-64971992 Msa1262320:intron 40.0%
CGAAATCCTTCTTTCCAGTT+GGG - chr8_2:64971974-64971993 Msa1262320:intron 40.0%
GATATACCCAACTGGAAAGA+AGG + chr8_2:64971983-64972002 None:intergenic 40.0%
CAGACATGATGAGAAAGATG+TGG - chr8_2:64972037-64972056 Msa1262320:intron 40.0%
ATTGGAAAGAATGGTGAAGG+TGG - chr8_2:64972070-64972089 Msa1262320:intron 40.0%
TTGGAAAGAATGGTGAAGGT+GGG - chr8_2:64972071-64972090 Msa1262320:intron 40.0%
CATAAACTGAAAGCCACATG+AGG + chr8_2:64972432-64972451 None:intergenic 40.0%
TTGACATTGACATCAGGAAG+AGG + chr8_2:64972527-64972546 None:intergenic 40.0%
AAAAAAGCAGAAACGCGTTG+AGG - chr8_2:64973052-64973071 Msa1262320:intron 40.0%
CGAGATAAAACACAGGGTAT+CGG + chr8_2:64973222-64973241 None:intergenic 40.0%
! ATTGAGCTCCCTAGTGATTT+TGG - chr8_2:64973541-64973560 Msa1262320:intron 40.0%
GTTAATGCCCAACTGAAAAC+TGG - chr8_2:64973578-64973597 Msa1262320:CDS 40.0%
AGCTAAGTGTATGTCTGGAT+TGG - chr8_2:64973731-64973750 Msa1262320:intron 40.0%
! TAAGTGTATGTCTGGATTGG+CGG - chr8_2:64973734-64973753 Msa1262320:intron 40.0%
TAGTGCATGTTTGGATTTCG+CGG + chr8_2:64973858-64973877 None:intergenic 40.0%
! GATGGATCCATATTGATTGC+AGG - chr8_2:64974222-64974241 Msa1262320:intron 40.0%
AGAGAACCCTGCAATCAATA+TGG + chr8_2:64974232-64974251 None:intergenic 40.0%
AGGAATGCATTACCAAACCT+TGG - chr8_2:64974258-64974277 Msa1262320:intron 40.0%
TTACCAAACCTTGGTCTAAG+AGG - chr8_2:64974267-64974286 Msa1262320:intron 40.0%
AAACCTCTTAGACCAAGGTT+TGG + chr8_2:64974273-64974292 None:intergenic 40.0%
CTTCAAAACCTCTTAGACCA+AGG + chr8_2:64974278-64974297 None:intergenic 40.0%
TCAGCACATGATACAATTCC+GGG + chr8_2:64974339-64974358 None:intergenic 40.0%
GTCAGCACATGATACAATTC+CGG + chr8_2:64974340-64974359 None:intergenic 40.0%
TCGTGAATATGACAGAGTGA+TGG - chr8_2:64974503-64974522 Msa1262320:intron 40.0%
! CTTCCATCTTTTCTTCCTGT+GGG + chr8_2:64974545-64974564 None:intergenic 40.0%
! TTTTGTCGATGGACAGAAAC+AGG + chr8_2:64974614-64974633 None:intergenic 40.0%
! TGGCAGCAAATTTTTGTCGA+TGG + chr8_2:64974625-64974644 None:intergenic 40.0%
!! CGACAAAAATTTGCTGCCAA+AGG - chr8_2:64974626-64974645 Msa1262320:intron 40.0%
CATGACCTTGTTACCTTAGT+TGG - chr8_2:64974659-64974678 Msa1262320:intron 40.0%
GCATACCAACTAAGGTAACA+AGG + chr8_2:64974667-64974686 None:intergenic 40.0%
AAGCTCACATCAAATTTGGC+TGG + chr8_2:64975010-64975029 None:intergenic 40.0%
AAAATGTACGCGATGGTAAC+GGG - chr8_2:64975035-64975054 Msa1262320:CDS 40.0%
GGAAGATTCTGCTACAAGAA+GGG - chr8_2:64975084-64975103 Msa1262320:CDS 40.0%
!! AGGGTAGTGGAAAATTATGG+TGG - chr8_2:64975103-64975122 Msa1262320:CDS 40.0%
!! GGGTAGTGGAAAATTATGGT+GGG - chr8_2:64975104-64975123 Msa1262320:CDS 40.0%
AGTAGTGTAGATGTGAAGAC+TGG - chr8_2:64975190-64975209 Msa1262320:CDS 40.0%
! GATGTGAAGACTGGTATTGA+TGG - chr8_2:64975199-64975218 Msa1262320:CDS 40.0%
!! TGTGAAGACTGGTATTGATG+GGG - chr8_2:64975201-64975220 Msa1262320:CDS 40.0%
! ATTGAAATCACCGCGTGTTT+TGG - chr8_2:64975432-64975451 Msa1262320:CDS 40.0%
CTTGAATGTTAAGGCTGAGC+TGG + chr8_2:64970430-64970449 None:intergenic 45.0%
CAGCTCAGCCTTAACATTCA+AGG - chr8_2:64970428-64970447 Msa1262320:three_prime_UTR 45.0%
GGACATCTTTGCCTAAGTCA+TGG - chr8_2:64970449-64970468 Msa1262320:three_prime_UTR 45.0%
GATTCTCTTCGCCATGACTT+AGG + chr8_2:64970463-64970482 None:intergenic 45.0%
CGTGCAACACTTGATGTAGA+TGG - chr8_2:64970557-64970576 Msa1262320:three_prime_UTR 45.0%
! TGTCAAGTGAAGGGGTTTTG+TGG - chr8_2:64970668-64970687 Msa1262320:three_prime_UTR 45.0%
!! GTCAAGTGAAGGGGTTTTGT+GGG - chr8_2:64970669-64970688 Msa1262320:three_prime_UTR 45.0%
TATTGCTCCTCCAACATGAG+CGG - chr8_2:64970701-64970720 Msa1262320:intron 45.0%
GCTGTCTGCAAATGTTATCC+TGG - chr8_2:64970728-64970747 Msa1262320:intron 45.0%
!!! GCACGCTTTTAGTCTTGGAA+GGG + chr8_2:64970760-64970779 None:intergenic 45.0%
! CATAGGCACGCTTTTAGTCT+TGG + chr8_2:64970765-64970784 None:intergenic 45.0%
! CAAGACTAAAAGCGTGCCTA+TGG - chr8_2:64970763-64970782 Msa1262320:three_prime_UTR 45.0%
ACAAGTTTCCATCTCCATCG+TGG + chr8_2:64970903-64970922 None:intergenic 45.0%
GGAGATGGAAACTTGTGAGA+AGG - chr8_2:64970907-64970926 Msa1262320:CDS 45.0%
CCCCACAATCACAATCTTGT+TGG + chr8_2:64970937-64970956 None:intergenic 45.0%
GGGGGAGCAATATATGTCAA+CGG - chr8_2:64970953-64970972 Msa1262320:CDS 45.0%
GTTTGGAGGCGAAATAATGG+CGG + chr8_2:64971074-64971093 None:intergenic 45.0%
GACGAACTTGCAAGATCAAC+TGG - chr8_2:64971310-64971329 Msa1262320:intron 45.0%
CGAACTTGCAAGATCAACTG+GGG - chr8_2:64971312-64971331 Msa1262320:intron 45.0%
GAACTTGCAAGATCAACTGG+GGG - chr8_2:64971313-64971332 Msa1262320:intron 45.0%
! TTTTCAGAGGAGATAGGGAG+AGG - chr8_2:64971337-64971356 Msa1262320:intron 45.0%
GAGATAGGGAGAGGATCATT+TGG - chr8_2:64971346-64971365 Msa1262320:intron 45.0%
TCTATCCTCCAGTCTCTTCA+CGG + chr8_2:64971416-64971435 None:intergenic 45.0%
! GAATTTCTGAGGAAGGAGAG+CGG - chr8_2:64971434-64971453 Msa1262320:CDS 45.0%
! AATTTCTGAGGAAGGAGAGC+GGG - chr8_2:64971435-64971454 Msa1262320:CDS 45.0%
TGATGGCACAAGCATGTACT+TGG - chr8_2:64971816-64971835 Msa1262320:CDS 45.0%
!!! ACAGTTTTGGGGTGGTAATG+TGG - chr8_2:64971890-64971909 Msa1262320:intron 45.0%
TATTGGAGATAATCTGCCGC+AGG - chr8_2:64971916-64971935 Msa1262320:intron 45.0%
TGGAAAGAATGGTGAAGGTG+GGG - chr8_2:64972072-64972091 Msa1262320:intron 45.0%
CATGGAAATGAAGTCTGAGC+AGG + chr8_2:64973694-64973713 None:intergenic 45.0%
ACTAACAGGTATAGCCCTCA+AGG + chr8_2:64973975-64973994 None:intergenic 45.0%
TGATACAATTCCGGGGCATA+TGG + chr8_2:64974331-64974350 None:intergenic 45.0%
CAGCACATGATACAATTCCG+GGG + chr8_2:64974338-64974357 None:intergenic 45.0%
! ATGTGCTGACATCCTAGCAT+TGG - chr8_2:64974350-64974369 Msa1262320:intron 45.0%
! TCTTTTCTTCCTGTGGGTAC+TGG + chr8_2:64974539-64974558 None:intergenic 45.0%
GTACCCACAGGAAGAAAAGA+TGG - chr8_2:64974539-64974558 Msa1262320:intron 45.0%
! CCTTCCATCTTTTCTTCCTG+TGG + chr8_2:64974546-64974565 None:intergenic 45.0%
CCACAGGAAGAAAAGATGGA+AGG - chr8_2:64974543-64974562 Msa1262320:intron 45.0%
AAGTGGAGAAGGCAAGTTTG+AGG + chr8_2:64974588-64974607 None:intergenic 45.0%
GAAACAGGTTCAAGTGGAGA+AGG + chr8_2:64974599-64974618 None:intergenic 45.0%
TGGACAGAAACAGGTTCAAG+TGG + chr8_2:64974605-64974624 None:intergenic 45.0%
! TGTGAAGGTGCACATACCAT+AGG - chr8_2:64974827-64974846 Msa1262320:CDS 45.0%
TAAGCTGGGCTAAGAAAGCT+TGG + chr8_2:64974928-64974947 None:intergenic 45.0%
GGGAAGATTCTGCTACAAGA+AGG - chr8_2:64975083-64975102 Msa1262320:CDS 45.0%
TTCTGCTACAAGAAGGGTAG+TGG - chr8_2:64975090-64975109 Msa1262320:CDS 45.0%
TCAATCTGCACCAAAACACG+CGG + chr8_2:64975445-64975464 None:intergenic 45.0%
GAATGTTAAGGCTGAGCTGG+TGG + chr8_2:64970427-64970446 None:intergenic 50.0%
AGTCATGGCGAAGAGAATCG+TGG - chr8_2:64970464-64970483 Msa1262320:three_prime_UTR 50.0%
GCGAAGAGAATCGTGGTGAT+GGG - chr8_2:64970471-64970490 Msa1262320:three_prime_UTR 50.0%
GTCTTGGAAGGGATGAAACC+AGG + chr8_2:64970749-64970768 None:intergenic 50.0%
!!! GGCACGCTTTTAGTCTTGGA+AGG + chr8_2:64970761-64970780 None:intergenic 50.0%
! ATCAACTGGGGGCTTTTCAG+AGG - chr8_2:64971324-64971343 Msa1262320:intron 50.0%
! GGGGCTTTTCAGAGGAGATA+GGG - chr8_2:64971332-64971351 Msa1262320:intron 50.0%
! AAGTGTTGCCGTGAAGAGAC+TGG - chr8_2:64971405-64971424 Msa1262320:CDS 50.0%
! CTTCTCTTTGAAGGGGACAC+AGG - chr8_2:64971589-64971608 Msa1262320:intron 50.0%
AAGGGGACACAGGACTATCT+TGG - chr8_2:64971599-64971618 Msa1262320:intron 50.0%
CTTGCATTGGATGTGGCTAG+AGG - chr8_2:64971637-64971656 Msa1262320:intron 50.0%
GCATGTACTTGGCACCTGAA+TGG - chr8_2:64971827-64971846 Msa1262320:intron 50.0%
ATGGCAGAAGGAGGATGCAT+CGG - chr8_2:64971846-64971865 Msa1262320:intron 50.0%
TCATTGCAGGACGGAGAGAT+TGG + chr8_2:64972118-64972137 None:intergenic 50.0%
TACAAGCAAACTGGAGAGGG+AGG + chr8_2:64972185-64972204 None:intergenic 50.0%
! TCCCTCTCCAGTTTGCTTGT+AGG - chr8_2:64972184-64972203 Msa1262320:intron 50.0%
CCCTACAAGCAAACTGGAGA+GGG + chr8_2:64972188-64972207 None:intergenic 50.0%
! CCCTCTCCAGTTTGCTTGTA+GGG - chr8_2:64972185-64972204 Msa1262320:intron 50.0%
TCCCTACAAGCAAACTGGAG+AGG + chr8_2:64972189-64972208 None:intergenic 50.0%
GCATCTGTGCTCATCACTAG+TGG - chr8_2:64972312-64972331 Msa1262320:intron 50.0%
CAACAGCTGAGTCCATCGTA+CGG - chr8_2:64973621-64973640 Msa1262320:CDS 50.0%
TACAACTGTGGACCGTACGA+TGG + chr8_2:64973636-64973655 None:intergenic 50.0%
! AAAGATCCAAGCATTGCCCC+TGG - chr8_2:64973668-64973687 Msa1262320:intron 50.0%
AATGAAGTCTGAGCAGGCCA+GGG + chr8_2:64973688-64973707 None:intergenic 50.0%
AAATGAAGTCTGAGCAGGCC+AGG + chr8_2:64973689-64973708 None:intergenic 50.0%
AATATCTCTCCCACTCCCAC+AGG - chr8_2:64974194-64974213 Msa1262320:intron 50.0%
ATATCTCTCCCACTCCCACA+GGG - chr8_2:64974195-64974214 Msa1262320:intron 50.0%
CAAATAGAGGCCATATGCCC+CGG - chr8_2:64974318-64974337 Msa1262320:intron 50.0%
! AGCTCGTGATGCTGTCGATT+TGG - chr8_2:64974374-64974393 Msa1262320:intron 50.0%
CCTGCAATCTGTTTGGCCTA+TGG + chr8_2:64974846-64974865 None:intergenic 50.0%
CCATAGGCCAAACAGATTGC+AGG - chr8_2:64974843-64974862 Msa1262320:CDS 50.0%
AGTAGGATCAGCATTGCCAG+TGG + chr8_2:64974900-64974919 None:intergenic 50.0%
TGGAGATGGTTTGAGAAGGG+TGG - chr8_2:64974967-64974986 Msa1262320:CDS 50.0%
TGGTTTGAGAAGGGTGGCTT+TGG - chr8_2:64974973-64974992 Msa1262320:CDS 50.0%
!! GGATTCTAGAGTCAGACCAG+AGG - chr8_2:64975056-64975075 Msa1262320:CDS 50.0%
GGTGCAGATTGAAATCACCG+CGG - chr8_2:64975425-64975444 Msa1262320:CDS 50.0%
GTGCAGATTGAAATCACCGC+GGG - chr8_2:64975426-64975445 Msa1262320:CDS 50.0%
AATCTCGTTCCCTTCAGGTC+CGG - chr8_2:64975607-64975626 Msa1262320:CDS 50.0%
! TCTTTTGGACCGGACCTGAA+GGG + chr8_2:64975619-64975638 None:intergenic 50.0%
GGCGAAGAGAATCGTGGTGA+TGG - chr8_2:64970470-64970489 Msa1262320:three_prime_UTR 55.0%
GAGCAAGAATAGCTCGCGTG+TGG - chr8_2:64970616-64970635 Msa1262320:intron 55.0%
! GCTCGCGTGTGGTAATGTTG+TGG - chr8_2:64970627-64970646 Msa1262320:three_prime_UTR 55.0%
AGCATCACCGCTCATGTTGG+AGG + chr8_2:64970711-64970730 None:intergenic 55.0%
GACAGCATCACCGCTCATGT+TGG + chr8_2:64970714-64970733 None:intergenic 55.0%
! CGTGCCTATGGACTGTGTAC+AGG - chr8_2:64970775-64970794 Msa1262320:three_prime_UTR 55.0%
TGCGCCTGTACACAGTCCAT+AGG + chr8_2:64970782-64970801 None:intergenic 55.0%
! GGGGGCTTTTCAGAGGAGAT+AGG - chr8_2:64971331-64971350 Msa1262320:intron 55.0%
TGTTGCCGTGAAGAGACTGG+AGG - chr8_2:64971408-64971427 Msa1262320:CDS 55.0%
CTTGGCACCTGAATGGCAGA+AGG - chr8_2:64971834-64971853 Msa1262320:intron 55.0%
GCATCCTCCTTCTGCCATTC+AGG + chr8_2:64971844-64971863 None:intergenic 55.0%
GAATGGTGAAGGTGGGGTTG+TGG - chr8_2:64972078-64972097 Msa1262320:intron 55.0%
TTGCAGGACGGAGAGATTGG+TGG + chr8_2:64972115-64972134 None:intergenic 55.0%
CAAACTGGAGAGGGAGGAAC+TGG + chr8_2:64972179-64972198 None:intergenic 55.0%
TGGTGCAGCTGTTCCTCATG+TGG - chr8_2:64972416-64972435 Msa1262320:intron 55.0%
! CGTACGATGGACTCAGCTGT+TGG + chr8_2:64973623-64973642 None:intergenic 55.0%
ATGAAGTCTGAGCAGGCCAG+GGG + chr8_2:64973687-64973706 None:intergenic 55.0%
TTGCAGGGTTCTCTGCAGAG+AGG - chr8_2:64974238-64974257 Msa1262320:intron 55.0%
CATCACGAGCTGCCAATGCT+AGG + chr8_2:64974365-64974384 None:intergenic 55.0%
GTATTGTGTATGCGCACGCG+TGG + chr8_2:64974440-64974459 None:intergenic 55.0%
GACAGAGTGATGGCCCAAGT+TGG - chr8_2:64974513-64974532 Msa1262320:intron 55.0%
!! CTGTGGGTACTGGCCAACTT+GGG + chr8_2:64974529-64974548 None:intergenic 55.0%
TAGAGTCAGACCAGAGGCTG+TGG - chr8_2:64975062-64975081 Msa1262320:CDS 55.0%
AGAGTCAGACCAGAGGCTGT+GGG - chr8_2:64975063-64975082 Msa1262320:CDS 55.0%
CAGAATCTTCCCACAGCCTC+TGG + chr8_2:64975075-64975094 None:intergenic 55.0%
! CCGTGATTTTGTCAAGCCCG+CGG + chr8_2:64975473-64975492 None:intergenic 55.0%
CCGCGGGCTTGACAAAATCA+CGG - chr8_2:64975470-64975489 Msa1262320:CDS 55.0%
! GTCTTTTGGACCGGACCTGA+AGG + chr8_2:64975620-64975639 None:intergenic 55.0%
GGCACCTGAATGGCAGAAGG+AGG - chr8_2:64971837-64971856 Msa1262320:intron 60.0%
TGGATCCATCGCAGCCCTGT+GGG + chr8_2:64974212-64974231 None:intergenic 60.0%
ATGGATCCATCGCAGCCCTG+TGG + chr8_2:64974213-64974232 None:intergenic 60.0%
!! CCTGTGGGTACTGGCCAACT+TGG + chr8_2:64974530-64974549 None:intergenic 60.0%
! CCAAGTTGGCCAGTACCCAC+AGG - chr8_2:64974527-64974546 Msa1262320:intron 60.0%
AGCAGGCCAGGGGCAATGCT+TGG + chr8_2:64973677-64973696 None:intergenic 65.0%
CATCGCAGCCCTGTGGGAGT+GGG + chr8_2:64974206-64974225 None:intergenic 65.0%
CCATCGCAGCCCTGTGGGAG+TGG + chr8_2:64974207-64974226 None:intergenic 70.0%
CCACTCCCACAGGGCTGCGA+TGG - chr8_2:64974204-64974223 Msa1262320:intron 70.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 64970416 64975641 64970416 ID=Msa1262320;Name=Msa1262320
chr8_2 mRNA 64970416 64975641 64970416 ID=Msa1262320-mRNA-1;Parent=Msa1262320;Name=Msa1262320-mRNA-1;_AED=0.27;_eAED=0.27;_QI=0|0.57|0.62|0.87|0.71|0.62|8|310|627
chr8_2 exon 64970416 64970597 64970416 ID=Msa1262320-mRNA-1:exon:21035;Parent=Msa1262320-mRNA-1
chr8_2 exon 64970626 64970699 64970626 ID=Msa1262320-mRNA-1:exon:21034;Parent=Msa1262320-mRNA-1
chr8_2 exon 64970748 64971223 64970748 ID=Msa1262320-mRNA-1:exon:21033;Parent=Msa1262320-mRNA-1
chr8_2 exon 64971377 64971539 64971377 ID=Msa1262320-mRNA-1:exon:21032;Parent=Msa1262320-mRNA-1
chr8_2 exon 64971662 64971841 64971662 ID=Msa1262320-mRNA-1:exon:21031;Parent=Msa1262320-mRNA-1
chr8_2 exon 64973578 64973648 64973578 ID=Msa1262320-mRNA-1:exon:21030;Parent=Msa1262320-mRNA-1
chr8_2 exon 64973896 64974119 64973896 ID=Msa1262320-mRNA-1:exon:21029;Parent=Msa1262320-mRNA-1
chr8_2 exon 64974818 64975641 64974818 ID=Msa1262320-mRNA-1:exon:21028;Parent=Msa1262320-mRNA-1
chr8_2 CDS 64974818 64975641 64974818 ID=Msa1262320-mRNA-1:cds;Parent=Msa1262320-mRNA-1
chr8_2 CDS 64973896 64974119 64973896 ID=Msa1262320-mRNA-1:cds;Parent=Msa1262320-mRNA-1
chr8_2 CDS 64973578 64973648 64973578 ID=Msa1262320-mRNA-1:cds;Parent=Msa1262320-mRNA-1
chr8_2 CDS 64971662 64971841 64971662 ID=Msa1262320-mRNA-1:cds;Parent=Msa1262320-mRNA-1
chr8_2 CDS 64971377 64971539 64971377 ID=Msa1262320-mRNA-1:cds;Parent=Msa1262320-mRNA-1
chr8_2 CDS 64970802 64971223 64970802 ID=Msa1262320-mRNA-1:cds;Parent=Msa1262320-mRNA-1
chr8_2 three_prime_UTR 64970748 64970801 64970748 ID=Msa1262320-mRNA-1:three_prime_utr;Parent=Msa1262320-mRNA-1
chr8_2 three_prime_UTR 64970626 64970699 64970626 ID=Msa1262320-mRNA-1:three_prime_utr;Parent=Msa1262320-mRNA-1
chr8_2 three_prime_UTR 64970416 64970597 64970416 ID=Msa1262320-mRNA-1:three_prime_utr;Parent=Msa1262320-mRNA-1
Gene Sequence

>Msa1262320

ATGACATACCACCAGCTCAGCCTTAACATTCAAGGACATCTTTGCCTAAGTCATGGCGAAGAGAATCGTGGTGATGGGATATGTTTCAACGATATCAATAAGCATAGAAAGAAGTCACACGAAAACGCAACTTCAATCTACCGTGCAACACTTGATGTAGATGGAAACTTTAGATTGTATGAGCACCAATTTGACTTTGAGAGCAAGAATAGCTCGCGTGTGGTAATGTTGTGGCAAGCACTTAATGATACATGTCAAGTGAAGGGGTTTTGTGGGTTGAACAGTTATTGCTCCTCCAACATGAGCGGTGATGCTGTCTGCAAATGTTATCCTGGTTTCATCCCTTCCAAGACTAAAAGCGTGCCTATGGACTGTGTACAGGCGCATAGCAAAGATGACTGTGAAAGCAGTGAAGATCGAATATCATTGTATAATTTCACTCACCTTAAGAATATGTCTTGGGGTGATATCCCATATTTTATGTCCACGATGGAGATGGAAACTTGTGAGAAGGCTTGCCAACAAGATTGTGATTGTGGGGGAGCAATATATGTCAACGGAAACTGTTATAAATACAGGCTTCCACTTATTTATGGCAGAGTTCAAAATGATTCTTCCACTCTGTCTGTAGCTCTTTTAAAGATTCCTTCAACAACCGCCATTATTTCGCCTCCAAACTCAAACAACACGAATGTGCCTAAGCTTATTGTTGACAACAAGAGAAATTTGATAATGATCCTAGCTTTTACTCTGGGTTTTGTTTCATTGATCTGTTTGGTCTTTGCAGTCTTCATTTTCTTGACTTACAGGCGTCAAGTTAATTTGAGAAGTATAGAGATGAATAATATTTCTTTAGCTGACGAAATCCTTCTTTCCAGTTGGGTATATCAATGTTTTGCAGCAGGACAGTTAAACAAGCTTATCAGACATGATGAGAAAGATGTGGATTGGAAGATATTGGAAAGAATGGTGAAGGTGGGGTTGTGGTGTGTGCAAGACCACCAATCTCTCCGTCCTGCAATGAAGAATGTAATCTTGATGTTGGAAGAAGAAACTGGTGCAGCTGTTCCTCATGTGGCTTTCAGTTTATGCATTGTTGTTTTTGTTTCAGTTGCTAAGGGCTGCGATGGATCCATATTGATTGCAGGGTTCTCTGCAGAGAGGAATGCATTACCAAACCTTGGTCTAAGAGGTTTTGAAGTGATAGATAATGCAAAATCACAAATAGAGGCCATATGCCCCGGAATTGTATCATGTGCTGACATCCTAGCATTGGCAGCTCGTGATGCTGTCGATTTGAGTGATGGCCCAAGTTGGCCAGTACCCACAGGAAGAAAAGATGGAAGGATTTCTTTATCATCTCAAGCCTCAAACTTGCCTTCTCCACTTGAACCTGTTTCTGTCCATCGACAAAAATTTGCTGCCAAAGGTCTAAATGATCATGACCTTGTTACCTTAGTTGGTGCACATACCATAGGCCAAACAGATTGCAGGTTCTTTAGTTATCGTCTATACAATTTCACAACCACTGGCAATGCTGATCCTACTATAAACCAAGCTTTCTTAGCCCAGCTTAAAGCAATATGTCCAAAAAATGGAGATGGTTTGAGAAGGGTGGCTTTGGACAAAGATAGTCCAGCCAAATTTGATGTGAGCTTCTTCAAAAATGTACGCGATGGTAACGGGATTCTAGAGTCAGACCAGAGGCTGTGGGAAGATTCTGCTACAAGAAGGGTAGTGGAAAATTATGGTGGGAATTTTAGAGGGTTATTGGGGCTAAGATTTGATTTTGAATTTCCAAAGGCTATGATTAAGTTGAGTAGTGTAGATGTGAAGACTGGTATTGATGGGGAGATTAGAAAAGTGTGCTCAAAATTTAATTGA

Protein sequence

>Msa1262320

MTYHQLSLNIQGHLCLSHGEENRGDGICFNDINKHRKKSHENATSIYRATLDVDGNFRLYEHQFDFESKNSSRVVMLWQALNDTCQVKGFCGLNSYCSSNMSGDAVCKCYPGFIPSKTKSVPMDCVQAHSKDDCESSEDRISLYNFTHLKNMSWGDIPYFMSTMEMETCEKACQQDCDCGGAIYVNGNCYKYRLPLIYGRVQNDSSTLSVALLKIPSTTAIISPPNSNNTNVPKLIVDNKRNLIMILAFTLGFVSLICLVFAVFIFLTYRRQVNLRSIEMNNISLADEILLSSWVYQCFAAGQLNKLIRHDEKDVDWKILERMVKVGLWCVQDHQSLRPAMKNVILMLEEETGAAVPHVAFSLCIVVFVSVAKGCDGSILIAGFSAERNALPNLGLRGFEVIDNAKSQIEAICPGIVSCADILALAARDAVDLSDGPSWPVPTGRKDGRISLSSQASNLPSPLEPVSVHRQKFAAKGLNDHDLVTLVGAHTIGQTDCRFFSYRLYNFTTTGNADPTINQAFLAQLKAICPKNGDGLRRVALDKDSPAKFDVSFFKNVRDGNGILESDQRLWEDSATRRVVENYGGNFRGLLGLRFDFEFPKAMIKLSSVDVKTGIDGEIRKVCSKFN*