AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0380060


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0380060 MtrunA17_Chr3g0133181 88.172 279 16 3 9 279 1 270 5.35e-146 410
Msa0380060 MtrunA17_Chr5g0427051 63.740 262 70 4 34 283 20 268 9.30e-99 290
Msa0380060 MtrunA17_Chr5g0412501 54.167 216 70 7 80 283 74 272 1.42e-61 196
Msa0380060 MtrunA17_Chr4g0076821 43.515 239 92 6 83 282 112 346 7.41e-55 181
Msa0380060 MtrunA17_Chr1g0188441 44.554 202 91 3 81 282 6 186 1.21e-52 170
Msa0380060 MtrunA17_Chr2g0315941 43.541 209 99 5 84 282 68 267 9.27e-48 160
Msa0380060 MtrunA17_Chr5g0404271 43.333 210 105 3 79 282 94 295 1.36e-47 160
Msa0380060 MtrunA17_Chr8g0367691 42.788 208 103 3 83 282 68 267 6.52e-47 158
Msa0380060 MtrunA17_Chr7g0217231 41.121 214 98 5 81 282 85 282 7.38e-46 157
Msa0380060 MtrunA17_Chr6g0453231 40.976 205 104 5 84 282 91 284 8.22e-39 139
Msa0380060 MtrunA17_Chr3g0092371 61.290 62 24 0 82 143 18 79 8.04e-21 84.3
Msa0380060 MtrunA17_Chr8g0357741 54.667 75 33 1 208 282 23 96 2.45e-20 83.6
Msa0380060 MtrunA17_Chr8g0357721 34.756 164 68 5 94 257 15 139 5.28e-20 84.0
Msa0380060 MtrunA17_Chr7g0243651 85.366 41 6 0 82 122 1 41 2.46e-19 80.1
Msa0380060 MtrunA17_Chr8g0361671 53.968 63 29 0 220 282 271 333 2.22e-18 84.3
Msa0380060 MtrunA17_Chr8g0361671 56.364 55 22 1 81 133 61 115 3.49e-13 68.9
Msa0380060 MtrunA17_Chr6g0479901 55.000 60 26 1 220 278 101 160 1.16e-16 76.3
Msa0380060 MtrunA17_Chr6g0479901 52.000 50 23 1 84 132 19 68 5.65e-11 60.5
Msa0380060 MtrunA17_Chr4g0060731 61.111 54 18 1 81 134 22 72 8.36e-16 70.9
Msa0380060 MtrunA17_Chr6g0453221 55.769 52 19 1 81 132 18 65 3.00e-13 64.3
Msa0380060 MtrunA17_Chr2g0278381 93.103 29 2 0 94 122 19 47 2.40e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0380060 AT4G24660.1 53.202 203 65 5 82 283 47 220 2.94e-66 206
Msa0380060 AT4G24660.2 52.261 199 65 5 82 279 47 216 5.25e-63 198
Msa0380060 AT2G02540.2 37.931 261 137 6 35 282 36 284 7.99e-60 192
Msa0380060 AT2G02540.1 37.931 261 137 6 35 282 36 284 7.99e-60 192
Msa0380060 AT1G14440.1 45.366 205 96 4 82 282 88 280 9.38e-54 177
Msa0380060 AT1G14440.2 45.366 205 96 4 82 282 88 280 9.38e-54 177
Msa0380060 AT5G65410.1 45.982 224 73 5 74 283 65 254 6.33e-51 169
Msa0380060 AT2G18350.1 47.291 203 87 4 80 282 78 260 4.48e-50 166
Msa0380060 AT3G50890.1 43.216 199 98 3 83 281 59 242 6.95e-46 155
Msa0380060 AT1G75240.1 41.126 231 108 2 81 283 73 303 1.53e-45 156
Msa0380060 AT5G15210.1 38.863 211 100 5 74 276 46 235 1.72e-37 134
Msa0380060 AT1G69600.1 40.291 206 96 7 82 279 29 215 1.07e-36 131
Msa0380060 AT3G28920.1 33.766 231 91 4 82 279 50 251 9.39e-34 125
Msa0380060 AT5G60480.1 37.931 203 88 4 81 277 34 204 1.90e-32 119
Msa0380060 AT1G74660.1 68.254 63 20 0 81 143 36 98 2.69e-24 94.7
Msa0380060 AT1G74660.2 72.414 58 16 0 82 139 37 94 5.38e-24 93.6
Msa0380060 AT5G42780.1 31.553 206 100 5 84 279 64 238 7.89e-24 97.4
Msa0380060 AT3G28917.1 66.667 60 19 1 81 139 30 89 1.76e-21 87.0
Msa0380060 AT1G18835.1 60.317 63 22 1 81 143 23 82 1.92e-19 81.3
Msa0380060 AT5G39760.1 53.846 65 30 0 218 282 198 262 7.68e-19 85.5

Find 91 sgRNAs with CRISPR-Local

Find 266 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGCATTTGCGGAGAAAAT+TGG 0.226300 3_1:-81579355 Msa0380060:CDS
TAACATGCCACCGGCGTAAC+AGG 0.280829 3_1:+81579967 None:intergenic
TTTCTTTGCGGTGAAAGTTC+CGG 0.342082 3_1:+81579683 None:intergenic
CTTCTTCCTCTTCCTCCTCT+AGG 0.360974 3_1:+81580013 None:intergenic
GGTGGTAGTGGAGGAGGAAG+TGG 0.392563 3_1:-81579430 Msa0380060:CDS
TATCAAGAGACATGTGCTTA+AGG 0.397983 3_1:-81579275 Msa0380060:CDS
AGAGACATGTGCTTAAGGTT+TGG 0.408486 3_1:-81579270 Msa0380060:CDS
GGATAAGATGCTTGCATTTG+CGG 0.410009 3_1:-81579365 Msa0380060:CDS
CCACCACCACCGCTGCTGCT+TGG 0.417998 3_1:+81579451 None:intergenic
AGCAGCAGCGGTGGTGGTGG+TGG 0.434714 3_1:-81579448 Msa0380060:CDS
GACACCACCGCCTGTGGCGG+TGG 0.436575 3_1:+81579861 None:intergenic
TGTGGCGGTGGCGGTGGCTG+TGG 0.437897 3_1:+81579873 None:intergenic
AAAATTCACACAGGAACAAA+AGG 0.449497 3_1:-81579386 Msa0380060:CDS
AACGGACGATGTTGTGATAT+CGG 0.449782 3_1:+81579535 None:intergenic
TTGTATCTGACCGTTCCTGC+TGG 0.450197 3_1:+81579829 None:intergenic
CACAATAACAAGCACACTCT+TGG 0.453753 3_1:-81579244 Msa0380060:CDS
ATTGATGGTGGTGGTGTTGA+GGG 0.453905 3_1:+81579626 None:intergenic
GGTGGTGGTGGTAGTGGAGG+AGG 0.457454 3_1:-81579436 Msa0380060:CDS
TTGTGATATCGGTGGAGTTA+CGG 0.462629 3_1:+81579546 None:intergenic
ATTCACCGTCGATTTCTTTG+CGG 0.470970 3_1:+81579671 None:intergenic
CCAAGCAGCAGCGGTGGTGG+TGG 0.471348 3_1:-81579451 Msa0380060:CDS
TTGCATTTGCGGAGAAAATT+GGG 0.474261 3_1:-81579354 Msa0380060:CDS
GTTGAGGGTGATGAGACCGC+TGG 0.475704 3_1:+81579641 None:intergenic
TGGTGGAAACCAGGCGGAGG+AGG 0.482300 3_1:+81579574 None:intergenic
AATTGATGGTGGTGGTGTTG+AGG 0.486125 3_1:+81579625 None:intergenic
AACGCTGCACGGTGGTAGTA+AGG 0.486813 3_1:+81579598 None:intergenic
TCCACCAGCTGCATCGAGTA+GGG 0.488823 3_1:-81579506 Msa0380060:CDS
AATGGGGTTCCCTGTTACGC+CGG 0.489920 3_1:-81579977 Msa0380060:CDS
CGAAGACCTAGAGGAGGAAG+AGG 0.490659 3_1:-81580019 Msa0380060:CDS
ACCGCCTGTGGCGGTGGCGG+TGG 0.490667 3_1:+81579867 None:intergenic
GCAGCGTTACCTCCTCCGCC+TGG 0.493199 3_1:-81579583 Msa0380060:CDS
TTAAAAGGTGGAAAGCAGAA+TGG 0.495571 3_1:-81580055 Msa0380060:intron
TTCCAGTGTTCCTTCTTCTC+CGG 0.499051 3_1:+81579735 None:intergenic
ACAGCCACCGCCACCGCCAC+AGG 0.500842 3_1:-81579871 Msa0380060:CDS
GAGGAAGTGGAACGAAGAAA+AGG 0.501558 3_1:-81579417 Msa0380060:CDS
CGCTTGGAAACTCTGCAGTT+AGG 0.505606 3_1:-81579939 Msa0380060:CDS
ACAGGCGGTGGTGTCAAAAG+TGG 0.508398 3_1:-81579853 Msa0380060:CDS
AATCCAAGCAGCAGCGGTGG+TGG 0.510288 3_1:-81579454 Msa0380060:CDS
ACCGCCACCGCCACAGGCGG+TGG 0.512162 3_1:-81579865 Msa0380060:CDS
ACCACCGCCTGTGGCGGTGG+CGG 0.513320 3_1:+81579864 None:intergenic
TTGAGGGTGATGAGACCGCT+GGG 0.515445 3_1:+81579642 None:intergenic
GGTGGAATCGGTTCAGCGGA+CGG 0.518412 3_1:-81579904 Msa0380060:CDS
GGTGTCAAAAGTGGGCCAGC+AGG 0.527350 3_1:-81579844 Msa0380060:CDS
TGGTGGTGGAAACCAGGCGG+AGG 0.539701 3_1:+81579571 None:intergenic
GGTAGTAAGGTGATAATTGA+TGG 0.540087 3_1:+81579611 None:intergenic
GTGGAGTTACGGAGTGGTGG+TGG 0.542600 3_1:+81579557 None:intergenic
AGAAGAAGGAACACTGGAAG+CGG 0.543572 3_1:-81579731 Msa0380060:CDS
GTGCTGCTTGTAACTGTCAC+CGG 0.544839 3_1:-81579702 Msa0380060:CDS
CAAAAGTGGGCCAGCAGGAA+CGG 0.546267 3_1:-81579839 Msa0380060:CDS
GGGGTTCCCTGTTACGCCGG+TGG 0.551765 3_1:-81579974 Msa0380060:CDS
GTGGCATGTTACGACTCGCT+TGG 0.557648 3_1:-81579955 Msa0380060:CDS
AAGAATCACGCCGTCAGCAT+AGG 0.558884 3_1:-81579796 Msa0380060:CDS
ACGGAGTGGTGGTGGAAACC+AGG 0.562207 3_1:+81579565 None:intergenic
TTTGACACCACCGCCTGTGG+CGG 0.564151 3_1:+81579858 None:intergenic
AATCCCCTACTCGATGCAGC+TGG 0.564604 3_1:+81579502 None:intergenic
AATCACGCCGTCAGCATAGG+TGG 0.574956 3_1:-81579793 Msa0380060:CDS
ATAGGTGGTCACGCCGTGGA+TGG 0.576462 3_1:-81579778 Msa0380060:CDS
CCCCTACTCGATGCAGCTGG+TGG 0.577449 3_1:+81579505 None:intergenic
CAGGCGGTGGTGTCAAAAGT+GGG 0.580393 3_1:-81579852 Msa0380060:CDS
AATTGGGTGGAGAATTCAGA+AGG 0.584858 3_1:-81579338 Msa0380060:CDS
AACATGCCACCGGCGTAACA+GGG 0.586523 3_1:+81579968 None:intergenic
TCAAATCCAAGCAGCAGCGG+TGG 0.591349 3_1:-81579457 Msa0380060:CDS
AGCGAGTCGTAACATGCCAC+CGG 0.591718 3_1:+81579958 None:intergenic
AGAATTCAGAAGGAAGATGA+AGG 0.605493 3_1:-81579328 Msa0380060:CDS
GCAGCTGGTGGAAGAGCCAA+CGG 0.605589 3_1:+81579517 None:intergenic
CATTTGCGGAGAAAATTGGG+TGG 0.607411 3_1:-81579351 Msa0380060:CDS
GCGGAGGAGGTAACGCTGCA+CGG 0.609223 3_1:+81579587 None:intergenic
TCGGTGGAGTTACGGAGTGG+TGG 0.614261 3_1:+81579554 None:intergenic
GGCGTGACCACCTATGCTGA+CGG 0.619665 3_1:+81579786 None:intergenic
CCACCAGCTGCATCGAGTAG+GGG 0.624461 3_1:-81579505 Msa0380060:CDS
TTCCACCAGCTGCATCGAGT+AGG 0.625338 3_1:-81579507 Msa0380060:CDS
CAGCATAGGTGGTCACGCCG+TGG 0.632841 3_1:-81579782 Msa0380060:CDS
TGGCGGTGGAATCGGTTCAG+CGG 0.633285 3_1:-81579908 Msa0380060:CDS
GATATCACAACATCGTCCGT+TGG 0.638979 3_1:-81579533 Msa0380060:CDS
TGCCGGAGAAGAAGGAACAC+TGG 0.644421 3_1:-81579737 Msa0380060:CDS
GGACGATGTTGTGATATCGG+TGG 0.659157 3_1:+81579538 None:intergenic
AGTAAGGTGATAATTGATGG+TGG 0.668303 3_1:+81579614 None:intergenic
AAGGTGATAATTGATGGTGG+TGG 0.673505 3_1:+81579617 None:intergenic
GAGTGGTGGTGGAAACCAGG+CGG 0.674377 3_1:+81579568 None:intergenic
GGAATCGGTTCAGCGGACGG+AGG 0.678169 3_1:-81579901 Msa0380060:CDS
GCCACCGCCACCGCCACAGG+CGG 0.681153 3_1:-81579868 Msa0380060:CDS
GTTTAGAACAAAATTCACAC+AGG 0.682835 3_1:-81579395 Msa0380060:CDS
TGATGAACACGAAGACCTAG+AGG 0.684893 3_1:-81580028 Msa0380060:CDS
AAACTCGCAACATCCATCCA+CGG 0.687116 3_1:+81579765 None:intergenic
GTGTCAAATCCAAGCAGCAG+CGG 0.696717 3_1:-81579460 Msa0380060:CDS
TTTCACCGCAAAGAAATCGA+CGG 0.699703 3_1:-81579676 Msa0380060:CDS
TGAACACGAAGACCTAGAGG+AGG 0.711856 3_1:-81580025 Msa0380060:CDS
ATATCGGTGGAGTTACGGAG+TGG 0.773672 3_1:+81579551 None:intergenic
ACGGTGAATTCACTCCCCAG+CGG 0.785774 3_1:-81579657 Msa0380060:CDS
GAGGAGGTAACGCTGCACGG+TGG 0.795380 3_1:+81579590 None:intergenic
TGAGGGTGATGAGACCGCTG+GGG 0.809094 3_1:+81579643 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATTATTTCTTGTTTAAA+AGG - chr3_1:81579724-81579743 Msa0380060:CDS 10.0%
!!! TTAATTATTTCTTGTTTAAA+AGG - chr3_1:81579724-81579743 Msa0380060:CDS 10.0%
!!! TTAATTAATTTGTTTGAACA+TGG + chr3_1:81579392-81579411 None:intergenic 15.0%
!!! AATAAATTTCCTGTTTTATT+TGG + chr3_1:81579674-81579693 None:intergenic 15.0%
!!! TTAATTAATTTGTTTGAACA+TGG + chr3_1:81579392-81579411 None:intergenic 15.0%
!!! AATAAATTTCCTGTTTTATT+TGG + chr3_1:81579674-81579693 None:intergenic 15.0%
!!! TTTATTTGGATTTGGTTTTT+GGG + chr3_1:81579660-81579679 None:intergenic 20.0%
!!! TTTTATTTGGATTTGGTTTT+TGG + chr3_1:81579661-81579680 None:intergenic 20.0%
!!! ATTATTTCTTGTTTAAAAGG+TGG - chr3_1:81579727-81579746 Msa0380060:CDS 20.0%
!!! TTTATTTGGATTTGGTTTTT+GGG + chr3_1:81579660-81579679 None:intergenic 20.0%
!!! TTTTATTTGGATTTGGTTTT+TGG + chr3_1:81579661-81579680 None:intergenic 20.0%
!!! ATTATTTCTTGTTTAAAAGG+TGG - chr3_1:81579727-81579746 Msa0380060:CDS 20.0%
!! GATATGTAGTGTTATTGTAA+TGG - chr3_1:81579262-81579281 Msa0380060:CDS 25.0%
!!! TTATTTGGATTTGGTTTTTG+GGG + chr3_1:81579659-81579678 None:intergenic 25.0%
! AAACCAAATCCAAATAAAAC+AGG - chr3_1:81579662-81579681 Msa0380060:CDS 25.0%
!!! TTTCCTGTTTTATTTGGATT+TGG + chr3_1:81579668-81579687 None:intergenic 25.0%
!! GATATGTAGTGTTATTGTAA+TGG - chr3_1:81579262-81579281 Msa0380060:CDS 25.0%
!!! TTATTTGGATTTGGTTTTTG+GGG + chr3_1:81579659-81579678 None:intergenic 25.0%
! AAACCAAATCCAAATAAAAC+AGG - chr3_1:81579662-81579681 Msa0380060:CDS 25.0%
!!! TTTCCTGTTTTATTTGGATT+TGG + chr3_1:81579668-81579687 None:intergenic 25.0%
!!! TCTTTCTTTTTTGCAGAAGA+CGG - chr3_1:81579323-81579342 Msa0380060:CDS 30.0%
AGAAGAAGAAGAAGAAGAAA+TGG - chr3_1:81579799-81579818 Msa0380060:CDS 30.0%
GAAGAAGAAGAAGAAGAAAT+GGG - chr3_1:81579800-81579819 Msa0380060:CDS 30.0%
AAGAAGAAGAAGAAGAAATG+GGG - chr3_1:81579801-81579820 Msa0380060:CDS 30.0%
! GTTTAGAACAAAATTCACAC+AGG - chr3_1:81580399-81580418 Msa0380060:intron 30.0%
AAAATTCACACAGGAACAAA+AGG - chr3_1:81580408-81580427 Msa0380060:intron 30.0%
!!! TCTTTCTTTTTTGCAGAAGA+CGG - chr3_1:81579323-81579342 Msa0380060:CDS 30.0%
AGAAGAAGAAGAAGAAGAAA+TGG - chr3_1:81579799-81579818 Msa0380060:CDS 30.0%
GAAGAAGAAGAAGAAGAAAT+GGG - chr3_1:81579800-81579819 Msa0380060:CDS 30.0%
AAGAAGAAGAAGAAGAAATG+GGG - chr3_1:81579801-81579820 Msa0380060:CDS 30.0%
! GTTTAGAACAAAATTCACAC+AGG - chr3_1:81580399-81580418 Msa0380060:intron 30.0%
AAAATTCACACAGGAACAAA+AGG - chr3_1:81580408-81580427 Msa0380060:intron 30.0%
TGTAATGGCAAGTAATTGAG+AGG - chr3_1:81579277-81579296 Msa0380060:CDS 35.0%
!!! CTTTCTTTTTTGCAGAAGAC+GGG - chr3_1:81579324-81579343 Msa0380060:CDS 35.0%
!! ATGGCTTTGAAGATAAGAGA+GGG + chr3_1:81579373-81579392 None:intergenic 35.0%
!! CCTTGTTATTATCCTCCTAT+CGG - chr3_1:81579498-81579517 Msa0380060:CDS 35.0%
TGATAAATTTGACCGATAGG+AGG + chr3_1:81579513-81579532 None:intergenic 35.0%
GCATGATAAATTTGACCGAT+AGG + chr3_1:81579516-81579535 None:intergenic 35.0%
TCTACAATCAATGTCTCTGA+GGG + chr3_1:81579579-81579598 None:intergenic 35.0%
ATCTACAATCAATGTCTCTG+AGG + chr3_1:81579580-81579599 None:intergenic 35.0%
TTAAAAGGTGGAAAGCAGAA+TGG - chr3_1:81579739-81579758 Msa0380060:CDS 35.0%
AGTAAGGTGATAATTGATGG+TGG + chr3_1:81580183-81580202 None:intergenic 35.0%
GGTAGTAAGGTGATAATTGA+TGG + chr3_1:81580186-81580205 None:intergenic 35.0%
TTGCATTTGCGGAGAAAATT+GGG - chr3_1:81580440-81580459 Msa0380060:intron 35.0%
AGAATTCAGAAGGAAGATGA+AGG - chr3_1:81580466-81580485 Msa0380060:intron 35.0%
TATCAAGAGACATGTGCTTA+AGG - chr3_1:81580519-81580538 Msa0380060:intron 35.0%
TGTAATGGCAAGTAATTGAG+AGG - chr3_1:81579277-81579296 Msa0380060:CDS 35.0%
!!! CTTTCTTTTTTGCAGAAGAC+GGG - chr3_1:81579324-81579343 Msa0380060:CDS 35.0%
!! ATGGCTTTGAAGATAAGAGA+GGG + chr3_1:81579373-81579392 None:intergenic 35.0%
!! CCTTGTTATTATCCTCCTAT+CGG - chr3_1:81579498-81579517 Msa0380060:CDS 35.0%
TGATAAATTTGACCGATAGG+AGG + chr3_1:81579513-81579532 None:intergenic 35.0%
GCATGATAAATTTGACCGAT+AGG + chr3_1:81579516-81579535 None:intergenic 35.0%
TCTACAATCAATGTCTCTGA+GGG + chr3_1:81579579-81579598 None:intergenic 35.0%
ATCTACAATCAATGTCTCTG+AGG + chr3_1:81579580-81579599 None:intergenic 35.0%
TTAAAAGGTGGAAAGCAGAA+TGG - chr3_1:81579739-81579758 Msa0380060:CDS 35.0%
AGTAAGGTGATAATTGATGG+TGG + chr3_1:81580183-81580202 None:intergenic 35.0%
GGTAGTAAGGTGATAATTGA+TGG + chr3_1:81580186-81580205 None:intergenic 35.0%
TTGCATTTGCGGAGAAAATT+GGG - chr3_1:81580440-81580459 Msa0380060:intron 35.0%
AGAATTCAGAAGGAAGATGA+AGG - chr3_1:81580466-81580485 Msa0380060:intron 35.0%
TATCAAGAGACATGTGCTTA+AGG - chr3_1:81580519-81580538 Msa0380060:intron 35.0%
AAGAGATGTCAGTTTCACTC+TGG + chr3_1:81579307-81579326 None:intergenic 40.0%
!! TGGCTTTGAAGATAAGAGAG+GGG + chr3_1:81579372-81579391 None:intergenic 40.0%
!! CATGGCTTTGAAGATAAGAG+AGG + chr3_1:81579374-81579393 None:intergenic 40.0%
CCGATAGGAGGATAATAACA+AGG + chr3_1:81579501-81579520 None:intergenic 40.0%
CTACAATCAATGTCTCTGAG+GGG + chr3_1:81579578-81579597 None:intergenic 40.0%
TCTGCAGTTAGGTCCAAAAA+TGG - chr3_1:81579866-81579885 Msa0380060:CDS 40.0%
TTTCTTTGCGGTGAAAGTTC+CGG + chr3_1:81580114-81580133 None:intergenic 40.0%
TTTCACCGCAAAGAAATCGA+CGG - chr3_1:81580118-81580137 Msa0380060:intron 40.0%
!! ATTCACCGTCGATTTCTTTG+CGG + chr3_1:81580126-81580145 None:intergenic 40.0%
!! AAGGTGATAATTGATGGTGG+TGG + chr3_1:81580180-81580199 None:intergenic 40.0%
TTGTGATATCGGTGGAGTTA+CGG + chr3_1:81580251-81580270 None:intergenic 40.0%
AACGGACGATGTTGTGATAT+CGG + chr3_1:81580262-81580281 None:intergenic 40.0%
GGATAAGATGCTTGCATTTG+CGG - chr3_1:81580429-81580448 Msa0380060:intron 40.0%
CTTGCATTTGCGGAGAAAAT+TGG - chr3_1:81580439-81580458 Msa0380060:intron 40.0%
AATTGGGTGGAGAATTCAGA+AGG - chr3_1:81580456-81580475 Msa0380060:intron 40.0%
AGAGACATGTGCTTAAGGTT+TGG - chr3_1:81580524-81580543 Msa0380060:intron 40.0%
CACAATAACAAGCACACTCT+TGG - chr3_1:81580550-81580569 Msa0380060:intron 40.0%
AAGAGATGTCAGTTTCACTC+TGG + chr3_1:81579307-81579326 None:intergenic 40.0%
!! TGGCTTTGAAGATAAGAGAG+GGG + chr3_1:81579372-81579391 None:intergenic 40.0%
!! CATGGCTTTGAAGATAAGAG+AGG + chr3_1:81579374-81579393 None:intergenic 40.0%
CCGATAGGAGGATAATAACA+AGG + chr3_1:81579501-81579520 None:intergenic 40.0%
CTACAATCAATGTCTCTGAG+GGG + chr3_1:81579578-81579597 None:intergenic 40.0%
TCTGCAGTTAGGTCCAAAAA+TGG - chr3_1:81579866-81579885 Msa0380060:CDS 40.0%
TTTCTTTGCGGTGAAAGTTC+CGG + chr3_1:81580114-81580133 None:intergenic 40.0%
TTTCACCGCAAAGAAATCGA+CGG - chr3_1:81580118-81580137 Msa0380060:intron 40.0%
!! ATTCACCGTCGATTTCTTTG+CGG + chr3_1:81580126-81580145 None:intergenic 40.0%
!! AAGGTGATAATTGATGGTGG+TGG + chr3_1:81580180-81580199 None:intergenic 40.0%
TTGTGATATCGGTGGAGTTA+CGG + chr3_1:81580251-81580270 None:intergenic 40.0%
AACGGACGATGTTGTGATAT+CGG + chr3_1:81580262-81580281 None:intergenic 40.0%
GGATAAGATGCTTGCATTTG+CGG - chr3_1:81580429-81580448 Msa0380060:intron 40.0%
CTTGCATTTGCGGAGAAAAT+TGG - chr3_1:81580439-81580458 Msa0380060:intron 40.0%
AATTGGGTGGAGAATTCAGA+AGG - chr3_1:81580456-81580475 Msa0380060:intron 40.0%
AGAGACATGTGCTTAAGGTT+TGG - chr3_1:81580524-81580543 Msa0380060:intron 40.0%
CACAATAACAAGCACACTCT+TGG - chr3_1:81580550-81580569 Msa0380060:intron 40.0%
TGAAGATAAGAGAGGGGAAG+AGG + chr3_1:81579366-81579385 None:intergenic 45.0%
TGATGAACACGAAGACCTAG+AGG - chr3_1:81579766-81579785 Msa0380060:CDS 45.0%
GCAGTTAGGTCCAAAAATGG+CGG - chr3_1:81579869-81579888 Msa0380060:CDS 45.0%
TCCAAAAATGGCGGTGGAAT+CGG - chr3_1:81579878-81579897 Msa0380060:CDS 45.0%
AAACTCGCAACATCCATCCA+CGG + chr3_1:81580032-81580051 None:intergenic 45.0%
!!! TGTTGCGAGTTTTTAGCTGC+CGG - chr3_1:81580040-81580059 Msa0380060:CDS 45.0%
!!! TTTTTAGCTGCCGGAGAAGA+AGG - chr3_1:81580049-81580068 Msa0380060:CDS 45.0%
TTCCAGTGTTCCTTCTTCTC+CGG + chr3_1:81580062-81580081 None:intergenic 45.0%
AGAAGAAGGAACACTGGAAG+CGG - chr3_1:81580063-81580082 Msa0380060:intron 45.0%
!! ATTGATGGTGGTGGTGTTGA+GGG + chr3_1:81580171-81580190 None:intergenic 45.0%
!! AATTGATGGTGGTGGTGTTG+AGG + chr3_1:81580172-81580191 None:intergenic 45.0%
GATATCACAACATCGTCCGT+TGG - chr3_1:81580261-81580280 Msa0380060:intron 45.0%
GAGGAAGTGGAACGAAGAAA+AGG - chr3_1:81580377-81580396 Msa0380060:intron 45.0%
CATTTGCGGAGAAAATTGGG+TGG - chr3_1:81580443-81580462 Msa0380060:intron 45.0%
TGAAGATAAGAGAGGGGAAG+AGG + chr3_1:81579366-81579385 None:intergenic 45.0%
TGATGAACACGAAGACCTAG+AGG - chr3_1:81579766-81579785 Msa0380060:CDS 45.0%
GCAGTTAGGTCCAAAAATGG+CGG - chr3_1:81579869-81579888 Msa0380060:CDS 45.0%
TCCAAAAATGGCGGTGGAAT+CGG - chr3_1:81579878-81579897 Msa0380060:CDS 45.0%
AAACTCGCAACATCCATCCA+CGG + chr3_1:81580032-81580051 None:intergenic 45.0%
!!! TGTTGCGAGTTTTTAGCTGC+CGG - chr3_1:81580040-81580059 Msa0380060:CDS 45.0%
!!! TTTTTAGCTGCCGGAGAAGA+AGG - chr3_1:81580049-81580068 Msa0380060:CDS 45.0%
TTCCAGTGTTCCTTCTTCTC+CGG + chr3_1:81580062-81580081 None:intergenic 45.0%
AGAAGAAGGAACACTGGAAG+CGG - chr3_1:81580063-81580082 Msa0380060:intron 45.0%
!! ATTGATGGTGGTGGTGTTGA+GGG + chr3_1:81580171-81580190 None:intergenic 45.0%
!! AATTGATGGTGGTGGTGTTG+AGG + chr3_1:81580172-81580191 None:intergenic 45.0%
GATATCACAACATCGTCCGT+TGG - chr3_1:81580261-81580280 Msa0380060:intron 45.0%
GAGGAAGTGGAACGAAGAAA+AGG - chr3_1:81580377-81580396 Msa0380060:intron 45.0%
CATTTGCGGAGAAAATTGGG+TGG - chr3_1:81580443-81580462 Msa0380060:intron 45.0%
TAAGAGAGGGGAAGAGGATG+TGG + chr3_1:81579360-81579379 None:intergenic 50.0%
! ATCAATGTCTCTGAGGGGTG+AGG + chr3_1:81579573-81579592 None:intergenic 50.0%
GCTTGCTTGAGAGATGAGGT+AGG + chr3_1:81579616-81579635 None:intergenic 50.0%
GCTTGCTTGCTTGAGAGATG+AGG + chr3_1:81579620-81579639 None:intergenic 50.0%
TGAACACGAAGACCTAGAGG+AGG - chr3_1:81579769-81579788 Msa0380060:CDS 50.0%
CTTCTTCCTCTTCCTCCTCT+AGG + chr3_1:81579784-81579803 None:intergenic 50.0%
CGCTTGGAAACTCTGCAGTT+AGG - chr3_1:81579855-81579874 Msa0380060:CDS 50.0%
GTTAGGTCCAAAAATGGCGG+TGG - chr3_1:81579872-81579891 Msa0380060:CDS 50.0%
!! ACCGATTCCACCGCCATTTT+TGG + chr3_1:81579882-81579901 None:intergenic 50.0%
TTGTATCTGACCGTTCCTGC+TGG + chr3_1:81579968-81579987 None:intergenic 50.0%
AAGAATCACGCCGTCAGCAT+AGG - chr3_1:81579998-81580017 Msa0380060:CDS 50.0%
!! GTGCTGCTTGTAACTGTCAC+CGG - chr3_1:81580092-81580111 Msa0380060:intron 50.0%
ATATCGGTGGAGTTACGGAG+TGG + chr3_1:81580246-81580265 None:intergenic 50.0%
GGACGATGTTGTGATATCGG+TGG + chr3_1:81580259-81580278 None:intergenic 50.0%
GTGTCAAATCCAAGCAGCAG+CGG - chr3_1:81580334-81580353 Msa0380060:intron 50.0%
TAAGAGAGGGGAAGAGGATG+TGG + chr3_1:81579360-81579379 None:intergenic 50.0%
! ATCAATGTCTCTGAGGGGTG+AGG + chr3_1:81579573-81579592 None:intergenic 50.0%
GCTTGCTTGAGAGATGAGGT+AGG + chr3_1:81579616-81579635 None:intergenic 50.0%
GCTTGCTTGCTTGAGAGATG+AGG + chr3_1:81579620-81579639 None:intergenic 50.0%
TGAACACGAAGACCTAGAGG+AGG - chr3_1:81579769-81579788 Msa0380060:CDS 50.0%
CTTCTTCCTCTTCCTCCTCT+AGG + chr3_1:81579784-81579803 None:intergenic 50.0%
CGCTTGGAAACTCTGCAGTT+AGG - chr3_1:81579855-81579874 Msa0380060:CDS 50.0%
GTTAGGTCCAAAAATGGCGG+TGG - chr3_1:81579872-81579891 Msa0380060:CDS 50.0%
!! ACCGATTCCACCGCCATTTT+TGG + chr3_1:81579882-81579901 None:intergenic 50.0%
TTGTATCTGACCGTTCCTGC+TGG + chr3_1:81579968-81579987 None:intergenic 50.0%
AAGAATCACGCCGTCAGCAT+AGG - chr3_1:81579998-81580017 Msa0380060:CDS 50.0%
!! GTGCTGCTTGTAACTGTCAC+CGG - chr3_1:81580092-81580111 Msa0380060:intron 50.0%
ATATCGGTGGAGTTACGGAG+TGG + chr3_1:81580246-81580265 None:intergenic 50.0%
GGACGATGTTGTGATATCGG+TGG + chr3_1:81580259-81580278 None:intergenic 50.0%
GTGTCAAATCCAAGCAGCAG+CGG - chr3_1:81580334-81580353 Msa0380060:intron 50.0%
CGAAGACCTAGAGGAGGAAG+AGG - chr3_1:81579775-81579794 Msa0380060:CDS 55.0%
AATGGGGTTCCCTGTTACGC+CGG - chr3_1:81579817-81579836 Msa0380060:CDS 55.0%
AACATGCCACCGGCGTAACA+GGG + chr3_1:81579829-81579848 None:intergenic 55.0%
TAACATGCCACCGGCGTAAC+AGG + chr3_1:81579830-81579849 None:intergenic 55.0%
AGCGAGTCGTAACATGCCAC+CGG + chr3_1:81579839-81579858 None:intergenic 55.0%
GTGGCATGTTACGACTCGCT+TGG - chr3_1:81579839-81579858 Msa0380060:CDS 55.0%
! ACTTTTGACACCACCGCCTG+TGG + chr3_1:81579942-81579961 None:intergenic 55.0%
! ACAGGCGGTGGTGTCAAAAG+TGG - chr3_1:81579941-81579960 Msa0380060:CDS 55.0%
! CAGGCGGTGGTGTCAAAAGT+GGG - chr3_1:81579942-81579961 Msa0380060:CDS 55.0%
CAAAAGTGGGCCAGCAGGAA+CGG - chr3_1:81579955-81579974 Msa0380060:CDS 55.0%
AATCACGCCGTCAGCATAGG+TGG - chr3_1:81580001-81580020 Msa0380060:CDS 55.0%
TGCCGGAGAAGAAGGAACAC+TGG - chr3_1:81580057-81580076 Msa0380060:intron 55.0%
ACGGTGAATTCACTCCCCAG+CGG - chr3_1:81580137-81580156 Msa0380060:intron 55.0%
TTGAGGGTGATGAGACCGCT+GGG + chr3_1:81580155-81580174 None:intergenic 55.0%
AACGCTGCACGGTGGTAGTA+AGG + chr3_1:81580199-81580218 None:intergenic 55.0%
TTCCACCAGCTGCATCGAGT+AGG - chr3_1:81580287-81580306 Msa0380060:intron 55.0%
TCCACCAGCTGCATCGAGTA+GGG - chr3_1:81580288-81580307 Msa0380060:intron 55.0%
AATCCCCTACTCGATGCAGC+TGG + chr3_1:81580295-81580314 None:intergenic 55.0%
TCAAATCCAAGCAGCAGCGG+TGG - chr3_1:81580337-81580356 Msa0380060:intron 55.0%
CGAAGACCTAGAGGAGGAAG+AGG - chr3_1:81579775-81579794 Msa0380060:CDS 55.0%
AATGGGGTTCCCTGTTACGC+CGG - chr3_1:81579817-81579836 Msa0380060:CDS 55.0%
AACATGCCACCGGCGTAACA+GGG + chr3_1:81579829-81579848 None:intergenic 55.0%
TAACATGCCACCGGCGTAAC+AGG + chr3_1:81579830-81579849 None:intergenic 55.0%
AGCGAGTCGTAACATGCCAC+CGG + chr3_1:81579839-81579858 None:intergenic 55.0%
GTGGCATGTTACGACTCGCT+TGG - chr3_1:81579839-81579858 Msa0380060:CDS 55.0%
! ACTTTTGACACCACCGCCTG+TGG + chr3_1:81579942-81579961 None:intergenic 55.0%
! ACAGGCGGTGGTGTCAAAAG+TGG - chr3_1:81579941-81579960 Msa0380060:CDS 55.0%
! CAGGCGGTGGTGTCAAAAGT+GGG - chr3_1:81579942-81579961 Msa0380060:CDS 55.0%
CAAAAGTGGGCCAGCAGGAA+CGG - chr3_1:81579955-81579974 Msa0380060:CDS 55.0%
AATCACGCCGTCAGCATAGG+TGG - chr3_1:81580001-81580020 Msa0380060:CDS 55.0%
TGCCGGAGAAGAAGGAACAC+TGG - chr3_1:81580057-81580076 Msa0380060:intron 55.0%
ACGGTGAATTCACTCCCCAG+CGG - chr3_1:81580137-81580156 Msa0380060:intron 55.0%
TTGAGGGTGATGAGACCGCT+GGG + chr3_1:81580155-81580174 None:intergenic 55.0%
AACGCTGCACGGTGGTAGTA+AGG + chr3_1:81580199-81580218 None:intergenic 55.0%
TTCCACCAGCTGCATCGAGT+AGG - chr3_1:81580287-81580306 Msa0380060:intron 55.0%
TCCACCAGCTGCATCGAGTA+GGG - chr3_1:81580288-81580307 Msa0380060:intron 55.0%
AATCCCCTACTCGATGCAGC+TGG + chr3_1:81580295-81580314 None:intergenic 55.0%
TCAAATCCAAGCAGCAGCGG+TGG - chr3_1:81580337-81580356 Msa0380060:intron 55.0%
! TGGCGGTGGAATCGGTTCAG+CGG - chr3_1:81579886-81579905 Msa0380060:CDS 60.0%
! GGTGGAATCGGTTCAGCGGA+CGG - chr3_1:81579890-81579909 Msa0380060:CDS 60.0%
TTTGACACCACCGCCTGTGG+CGG + chr3_1:81579939-81579958 None:intergenic 60.0%
GGTGTCAAAAGTGGGCCAGC+AGG - chr3_1:81579950-81579969 Msa0380060:CDS 60.0%
GGCGTGACCACCTATGCTGA+CGG + chr3_1:81580011-81580030 None:intergenic 60.0%
ATAGGTGGTCACGCCGTGGA+TGG - chr3_1:81580016-81580035 Msa0380060:CDS 60.0%
TGAGGGTGATGAGACCGCTG+GGG + chr3_1:81580154-81580173 None:intergenic 60.0%
GTTGAGGGTGATGAGACCGC+TGG + chr3_1:81580156-81580175 None:intergenic 60.0%
!! GAGTGGTGGTGGAAACCAGG+CGG + chr3_1:81580229-81580248 None:intergenic 60.0%
!! ACGGAGTGGTGGTGGAAACC+AGG + chr3_1:81580232-81580251 None:intergenic 60.0%
GTGGAGTTACGGAGTGGTGG+TGG + chr3_1:81580240-81580259 None:intergenic 60.0%
TCGGTGGAGTTACGGAGTGG+TGG + chr3_1:81580243-81580262 None:intergenic 60.0%
GCAGCTGGTGGAAGAGCCAA+CGG + chr3_1:81580280-81580299 None:intergenic 60.0%
CCACCAGCTGCATCGAGTAG+GGG - chr3_1:81580289-81580308 Msa0380060:intron 60.0%
AATCCAAGCAGCAGCGGTGG+TGG - chr3_1:81580340-81580359 Msa0380060:intron 60.0%
!! GGTGGTAGTGGAGGAGGAAG+TGG - chr3_1:81580364-81580383 Msa0380060:intron 60.0%
! TGGCGGTGGAATCGGTTCAG+CGG - chr3_1:81579886-81579905 Msa0380060:CDS 60.0%
! GGTGGAATCGGTTCAGCGGA+CGG - chr3_1:81579890-81579909 Msa0380060:CDS 60.0%
TTTGACACCACCGCCTGTGG+CGG + chr3_1:81579939-81579958 None:intergenic 60.0%
GGTGTCAAAAGTGGGCCAGC+AGG - chr3_1:81579950-81579969 Msa0380060:CDS 60.0%
GGCGTGACCACCTATGCTGA+CGG + chr3_1:81580011-81580030 None:intergenic 60.0%
ATAGGTGGTCACGCCGTGGA+TGG - chr3_1:81580016-81580035 Msa0380060:CDS 60.0%
TGAGGGTGATGAGACCGCTG+GGG + chr3_1:81580154-81580173 None:intergenic 60.0%
GTTGAGGGTGATGAGACCGC+TGG + chr3_1:81580156-81580175 None:intergenic 60.0%
!! GAGTGGTGGTGGAAACCAGG+CGG + chr3_1:81580229-81580248 None:intergenic 60.0%
!! ACGGAGTGGTGGTGGAAACC+AGG + chr3_1:81580232-81580251 None:intergenic 60.0%
GTGGAGTTACGGAGTGGTGG+TGG + chr3_1:81580240-81580259 None:intergenic 60.0%
TCGGTGGAGTTACGGAGTGG+TGG + chr3_1:81580243-81580262 None:intergenic 60.0%
GCAGCTGGTGGAAGAGCCAA+CGG + chr3_1:81580280-81580299 None:intergenic 60.0%
CCACCAGCTGCATCGAGTAG+GGG - chr3_1:81580289-81580308 Msa0380060:intron 60.0%
AATCCAAGCAGCAGCGGTGG+TGG - chr3_1:81580340-81580359 Msa0380060:intron 60.0%
!! GGTGGTAGTGGAGGAGGAAG+TGG - chr3_1:81580364-81580383 Msa0380060:intron 60.0%
! GGAATCGGTTCAGCGGACGG+AGG - chr3_1:81579893-81579912 Msa0380060:CDS 65.0%
CAGCATAGGTGGTCACGCCG+TGG - chr3_1:81580012-81580031 Msa0380060:CDS 65.0%
GAGGAGGTAACGCTGCACGG+TGG + chr3_1:81580207-81580226 None:intergenic 65.0%
GCGGAGGAGGTAACGCTGCA+CGG + chr3_1:81580210-81580229 None:intergenic 65.0%
TGGTGGAAACCAGGCGGAGG+AGG + chr3_1:81580223-81580242 None:intergenic 65.0%
!! TGGTGGTGGAAACCAGGCGG+AGG + chr3_1:81580226-81580245 None:intergenic 65.0%
CCCCTACTCGATGCAGCTGG+TGG + chr3_1:81580292-81580311 None:intergenic 65.0%
!! AGCGGTGGTGGTGGTGGTAG+TGG - chr3_1:81580352-81580371 Msa0380060:intron 65.0%
!! GGTGGTGGTGGTGGTAGTGG+AGG - chr3_1:81580355-81580374 Msa0380060:intron 65.0%
!! GGTGGTGGTGGTAGTGGAGG+AGG - chr3_1:81580358-81580377 Msa0380060:intron 65.0%
! GGAATCGGTTCAGCGGACGG+AGG - chr3_1:81579893-81579912 Msa0380060:CDS 65.0%
CAGCATAGGTGGTCACGCCG+TGG - chr3_1:81580012-81580031 Msa0380060:CDS 65.0%
GAGGAGGTAACGCTGCACGG+TGG + chr3_1:81580207-81580226 None:intergenic 65.0%
GCGGAGGAGGTAACGCTGCA+CGG + chr3_1:81580210-81580229 None:intergenic 65.0%
TGGTGGAAACCAGGCGGAGG+AGG + chr3_1:81580223-81580242 None:intergenic 65.0%
!! TGGTGGTGGAAACCAGGCGG+AGG + chr3_1:81580226-81580245 None:intergenic 65.0%
CCCCTACTCGATGCAGCTGG+TGG + chr3_1:81580292-81580311 None:intergenic 65.0%
!! AGCGGTGGTGGTGGTGGTAG+TGG - chr3_1:81580352-81580371 Msa0380060:intron 65.0%
!! GGTGGTGGTGGTGGTAGTGG+AGG - chr3_1:81580355-81580374 Msa0380060:intron 65.0%
!! GGTGGTGGTGGTAGTGGAGG+AGG - chr3_1:81580358-81580377 Msa0380060:intron 65.0%
GGGGTTCCCTGTTACGCCGG+TGG - chr3_1:81579820-81579839 Msa0380060:CDS 70.0%
GCAGCGTTACCTCCTCCGCC+TGG - chr3_1:81580211-81580230 Msa0380060:intron 70.0%
CCACCACCACCGCTGCTGCT+TGG + chr3_1:81580346-81580365 None:intergenic 70.0%
! CCAAGCAGCAGCGGTGGTGG+TGG - chr3_1:81580343-81580362 Msa0380060:intron 70.0%
!! AGCAGCAGCGGTGGTGGTGG+TGG - chr3_1:81580346-81580365 Msa0380060:intron 70.0%
GGGGTTCCCTGTTACGCCGG+TGG - chr3_1:81579820-81579839 Msa0380060:CDS 70.0%
GCAGCGTTACCTCCTCCGCC+TGG - chr3_1:81580211-81580230 Msa0380060:intron 70.0%
CCACCACCACCGCTGCTGCT+TGG + chr3_1:81580346-81580365 None:intergenic 70.0%
! CCAAGCAGCAGCGGTGGTGG+TGG - chr3_1:81580343-81580362 Msa0380060:intron 70.0%
!! AGCAGCAGCGGTGGTGGTGG+TGG - chr3_1:81580346-81580365 Msa0380060:intron 70.0%
! TGTGGCGGTGGCGGTGGCTG+TGG + chr3_1:81579924-81579943 None:intergenic 75.0%
ACAGCCACCGCCACCGCCAC+AGG - chr3_1:81579923-81579942 Msa0380060:CDS 75.0%
ACCACCGCCTGTGGCGGTGG+CGG + chr3_1:81579933-81579952 None:intergenic 75.0%
GACACCACCGCCTGTGGCGG+TGG + chr3_1:81579936-81579955 None:intergenic 75.0%
! TGTGGCGGTGGCGGTGGCTG+TGG + chr3_1:81579924-81579943 None:intergenic 75.0%
ACAGCCACCGCCACCGCCAC+AGG - chr3_1:81579923-81579942 Msa0380060:CDS 75.0%
ACCACCGCCTGTGGCGGTGG+CGG + chr3_1:81579933-81579952 None:intergenic 75.0%
GACACCACCGCCTGTGGCGG+TGG + chr3_1:81579936-81579955 None:intergenic 75.0%
! GCCACCGCCACCGCCACAGG+CGG - chr3_1:81579926-81579945 Msa0380060:CDS 80.0%
!! ACCGCCTGTGGCGGTGGCGG+TGG + chr3_1:81579930-81579949 None:intergenic 80.0%
! ACCGCCACCGCCACAGGCGG+TGG - chr3_1:81579929-81579948 Msa0380060:CDS 80.0%
! GCCACCGCCACCGCCACAGG+CGG - chr3_1:81579926-81579945 Msa0380060:CDS 80.0%
!! ACCGCCTGTGGCGGTGGCGG+TGG + chr3_1:81579930-81579949 None:intergenic 80.0%
! ACCGCCACCGCCACAGGCGG+TGG - chr3_1:81579929-81579948 Msa0380060:CDS 80.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 81579231 81580585 81579231 ID=Msa0380060;Name=Msa0380060
chr3_1 mRNA 81579231 81580585 81579231 ID=Msa0380060-mRNA-1;Parent=Msa0380060;Name=Msa0380060-mRNA-1;_AED=0.23;_eAED=0.23;_QI=0|0|0|0.66|1|1|3|0|283
chr3_1 exon 81580581 81580585 81580581 ID=Msa0380060-mRNA-1:exon:20743;Parent=Msa0380060-mRNA-1
chr3_1 exon 81580471 81580477 81580471 ID=Msa0380060-mRNA-1:exon:20742;Parent=Msa0380060-mRNA-1
chr3_1 exon 81579231 81580070 81579231 ID=Msa0380060-mRNA-1:exon:20741;Parent=Msa0380060-mRNA-1
chr3_1 CDS 81580581 81580585 81580581 ID=Msa0380060-mRNA-1:cds;Parent=Msa0380060-mRNA-1
chr3_1 CDS 81580471 81580477 81580471 ID=Msa0380060-mRNA-1:cds;Parent=Msa0380060-mRNA-1
chr3_1 CDS 81579231 81580070 81579231 ID=Msa0380060-mRNA-1:cds;Parent=Msa0380060-mRNA-1
Gene Sequence

>Msa0380060

ATGAGAAGACGGGTGGAAAGCAGAATGGAATTTGATGAACACGAAGACCTAGAGGAGGAAGAGGAAGAAGAAGAAGAAGAAGAAATGGGGTTCCCTGTTACGCCGGTGGCATGTTACGACTCGCTTGGAAACTCTGCAGTTAGGTCCAAAAATGGCGGTGGAATCGGTTCAGCGGACGGAGGAGCAGCCACAGCCACCGCCACCGCCACAGGCGGTGGTGTCAAAAGTGGGCCAGCAGGAACGGTCAGATACAAAGAATGTCAAAAGAATCACGCCGTCAGCATAGGTGGTCACGCCGTGGATGGATGTTGCGAGTTTTTAGCTGCCGGAGAAGAAGGAACACTGGAAGCGGTGATTTGTGCTGCTTGTAACTGTCACCGGAACTTTCACCGCAAAGAAATCGACGGTGAATTCACTCCCCAGCGGTCTCATCACCCTCAACACCACCACCATCAATTATCACCTTACTACCACCGTGCAGCGTTACCTCCTCCGCCTGGTTTCCACCACCACTCCGTAACTCCACCGATATCACAACATCGTCCGTTGGCTCTTCCACCAGCTGCATCGAGTAGGGGATTCAGCAGAGAAGAAGATAACGTGTCAAATCCAAGCAGCAGCGGTGGTGGTGGTGGTAGTGGAGGAGGAAGTGGAACGAAGAAAAGGTTTAGAACAAAATTCACACAGGAACAAAAGGATAAGATGCTTGCATTTGCGGAGAAAATTGGGTGGAGAATTCAGAAGGAAGATGAAGGTGCAATCGAACAATTCTGTGCTGACAATTTTATCAAGAGACATGTGCTTAAGGTTTGGATGCACAATAACAAGCACACTCTTGGTAAGAAACCCTAA

Protein sequence

>Msa0380060

MRRRVESRMEFDEHEDLEEEEEEEEEEEMGFPVTPVACYDSLGNSAVRSKNGGGIGSADGGAATATATATGGGVKSGPAGTVRYKECQKNHAVSIGGHAVDGCCEFLAAGEEGTLEAVICAACNCHRNFHRKEIDGEFTPQRSHHPQHHHHQLSPYYHRAALPPPPGFHHHSVTPPISQHRPLALPPAASSRGFSREEDNVSNPSSSGGGGGSGGGSGTKKRFRTKFTQEQKDKMLAFAEKIGWRIQKEDEGAIEQFCADNFIKRHVLKVWMHNNKHTLGKKP*